Pregenerated sensors for GJA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057123Ensembl transcript IDs: ENSMUST00000072600.7, ENSMUST00000199597.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAACACACAGGGCCACTGGGGACAGCCACTTGACTCTTGGAACTTaGGCTGAGGGTGTGGTTGCTGTGGCAGCTGCTGCCAGAGTGCGA | + |
|
Preference number: 1 (lower is better) Translates to: STHRATGDSHLTLGT*AEGVVAVAAAARVR Trigger: TCGCACTCTGGCAGCAGCTGCCACAGCAACCACACCCTCAGCCCAAGTTCCAAGAGTCAAGTGGCTGTCCCCAGTGGCCCTGTGTGTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR GCA 90 bp | AGGAGGTGTGGGAGAGGGAGGAGGGCTTGTGGTACTGTCACTGACTaGTGTGTCCAGGGCTGGCTAGGCCTGGTATTCACAAGTAGCACA | + |
|
Preference number: 1 (lower is better) Translates to: RRCGRGRRACGTVTD*CVQGWLGLVFTSST Trigger: TGTGCTACTTGTGAATACCAGGCCTAGCCAGCCCTGGACACAGCAGTCAGTGACAGTACCACAAGCCCTCCTCCCTCTCCCACACCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 90 bp | AGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTGACCTCTaGCCCTTCACCCTCCTGAACTTCTCATGCCTGATCTTTAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: SRGTQRWVTGTGTDL*PFTLLNFSCLIFRL Trigger: CAGCCTAAAGATCAGGCATGAGAAGTTCAGGAGGGTGAAGGGTCAGAGGTCAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 90 bp | CTGTTTCAACTCTGTCAACACACAGGGCCACTGGGGACAGCCACTTaGCTCTTGGAACTTGGGCTGAGGGTGTGGTTGCTGTGGCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: LFQLCQHTGPLGTAT*LLELGLRVWLLWQL Trigger: CAGCTGCCACAGCAACCACACCCTCAGCCCAAGTTCCAAGAGTCAAGTGGCTGTCCCCAGTGGCCCTGTGTGTTGACAGAGTTGAAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 90 bp | AAATGCCAGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTaGCCTCTGACCCTTCACCCTCCTGAACTTCTCATGCCTGATCTT | + |
|
Preference number: 1 (lower is better) Translates to: KCQQRDPEMGHWDRD*PLTLHPPELLMPDL Trigger: AAGATCAGGCATGAGAAGTTCAGGAGGGTGAAGGGTCAGAGGTCAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCTGGCATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR GCA 90 bp | AGTGCTGAGGAGAGTATACCATCACGAGAGAGACTGTTTCTTTCCTaGCTCACACTCCTTAGATCCCTCCTGGGCCTGGCCCTCCCTAAA | + |
|
Preference number: 1 (lower is better) Translates to: SAEESIPSRERLFLS*LTLLRSLLGLALPK Trigger: TTTAGGGAGGGCCAGGCCCAGGAGGGATCTAAGGAGTGTGAGGCAGGAAAGAAACAGTCTCTCTCGTGATGGTATACTCTCCTCAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CCA 90 bp | CTTGTGTGCACAGTGACTTCTGGAGGTCTTGGCACCCTTACGAGCTaGGTGTCTAGCCTGGCAGTAAGGCTGAGACATCATCAACATGAA | + |
|
Preference number: 1 (lower is better) Translates to: LVCTVTSGGLGTLTS*VSSLAVRLRHHQHE Trigger: TTCATGTTGATGATGTCTCAGCCTTACTGCCAGGCTAGACACCCAGCTCGTAAGGGTGCCAAGACCTCCAGAAGTCACTGTGCACACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 90 bp | ACAAGTAGCACACAGCGGAAGGCATCCAGGAAGGACATGCAGAGGTaGGGTGCTGGCTGGAACCGCCTGTTAATTCTTCACATTTCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: TSSTQRKASRKDMQR*GAGWNRLLILHISS Trigger: AGAAGAAATGTGAAGAATTAACAGGCGGTTCCAGCCAGCACCTCACCTCTGCATGTCCTTCCTGGATGCCTTCCGCTGTGTGCTACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 90 bp | CAGACGCAGAAATGGAACGGGCCGGCCCGGAGAGAGGCACGGTCTTaGGGTTCTGACTCAGTCAATTTTCTATTGAGTCATTTTCCATCT | + |
|
Preference number: 1 (lower is better) Translates to: QTQKWNGPARREARS*GSDSVNFLLSHFPS Trigger: AGATGGAAAATGACTCAATAGAAAATTGACTGAGTCAGAACCTCAAGACCGTGCCTCTCTCCGGGCCGGCCCGTTCCATTTCTGCGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR GCA 90 bp | TTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATaGACACACGAGCACACACACACAGAGGCACACAGAGATGGATGG | + |
|
Preference number: 1 (lower is better) Translates to: FPYRSSGLFFTILSA*THEHTHTEAHRDGW Trigger: CCATCCATCTCTGTGTGCCTCTGTGTGTGTGTGCTCGTGTGTGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR GCA 90 bp | GGAATATCTGCACTAAATAAGGGTCCAAACCAACTGGACCCTTTCTaGTTCCATGTCTCCTTGATGCCTCTAAGAGAGATCTTGGGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: GISALNKGPNQLDPF*FHVSLMPLREILGL Trigger: GAGGCCCAAGATCTCTCTTAGAGGCATCAAGGAGACATGGAAGCAGAAAGGGTCCAGTTGGTTTGGACCCTTATTTAGTGCAGATATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR GCA 90 bp | TCATGCCTGATCTTTAGGCTGATTAAGAAGCAAGCTCAGCCCTCCTaGCAGACAACTGAGAAGGAAGCAGAAAGACCCAAGTTTCTCTAC | + |
|
Preference number: 1 (lower is better) Translates to: SCLIFRLIKKQAQPS*QTTEKEAERPKFLY Trigger: GTAGAGAAACTTGGGTCTTTCTGCTTCCTTCTCAGTTGTCTGGCAGGAGGGCTGAGCTTGCTTCTTAATCAGCCTAAAGATCAGGCATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 90 bp | GGAGAGAGGCACGGTCTTGAGGTTCTGACTCAGTCAATTTTCTATTaGGTCATTTTCCATCTGTTTCAACTCTGTCAACACACAGGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: GERHGLEVLTQSIFY*VIFHLFQLCQHTGP Trigger: TGGCCCTGTGTGTTGACAGAGTTGAAACAGATGGAAAATGACTCAATAGAAAATTGACTGAGTCAGAACCTCAAGACCGTGCCTCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 90 bp | ATATTTAATAAGACTCAAAGCTTGGCAGAAACCCCGGAATCCATGTaGTATGGACCTGTGACTTCCTGGGCTTATCTGTCTGTCTGCCAC | + |
|
Preference number: 1 (lower is better) Translates to: IFNKTQSLAETPESM*YGPVTSWAYLSVCH Trigger: GTGGCAGACAGACAGATAAGCCCAGGAAGTCACAGGTCCATATCACATGGATTCCGGGGTTTCTGCCAAGCTTTGAGTCTTATTAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CCA 90 bp | AGGAGGTCAAACTGTGAACACACTTGCTTTTGTTTCCTTGCAACCTaGAGGATCACAGACCAGAGATTAAGTAGTTTTAAAGAGCAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: RRSNCEHTCFCFLAT*RITDQRLSSFKEQR Trigger: CCTTTGCTCTTTAAAACTACTTAATCTCTGGTCTGTGATCCTCCAGGTTGCAAGGAAACAAAAGCAAGTGTGTTCACAGTTTGACCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR GCA 90 bp | GTCAGGCACTCCAGTAGTTATTTCTTCCTTTCTTGGCTTCTTTACTaGAGTTCCATTTATTTAACAGAAGAAAAATTACGGCATCTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: VRHSSSYFFLSWLLY*SSIYLTEEKLRHLS Trigger: AGAAAGATGCCGTAATTTTTCTTCTGTTAAATAAATGGAACTGCAGTAAAGAAGCCAAGAAAGGAAGAAATAACTACTGGAGTGCCTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGCAGCTGCTGCCAGAGTGCGACTAGATGGGGGCACAGCCTCAGCTGTGGTAAGGACATGCAGAGGTaGGGTGCTGGCTGGAACCGC | + |
|
Preference number: 2 (lower is better) Translates to: CGSCCQSATRWGHSLSCGKDMQR*GAGWNR Trigger: GCGGTTCCAGCCAGCACCTCACCTCTGCATGTCCTT...ACCACAGCTGAGGCTGTGCCCCCATCTAGTCGCACTCTGGCAGCAGCTGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGCAGCTGCTGCCAGAGTGCGACTAGATGGGGGCACAGCCTCAGCTGTGGTTCCCACGTTGTTGCGTaGCCTCCTGGAGAAGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: CGSCCQSATRWGHSLSCGSHVVA*PPGEAA Trigger: AGCTGCTTCTCCAGGAGGCCACGCAACAACGTGGGA...ACCACAGCTGAGGCTGTGCCCCCATCTAGTCGCACTCTGGCAGCAGCTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTGGCCCCTCCCACTTTCCTGTTCATTGAGCATCCTGGCAAAAGATCCCACAGAGTGGTTTGCTCCTaGGTAGGGGTCCAGCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: AVAPPTFLFIEHPGKRSHRVVCS*VGVQRS Trigger: GCTCCGCTGGACCCCTACTCAGGAGCAAACCACTCT...GTGGGATCTTTTGCCAGGATGCTCAATGAACAGGAAAGTGGGAGGGGCCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | CGCAGAAATGGAACGGGCCGGCCCGGAGAGAGGCACGGTCTTGAGGTTCTGACTTTGACTCTTGGAACTTaGGCTGAGGGTGTGGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RRNGTGRPGERHGLEVLTLTLGT*AEGVVA Trigger: AGCAACCACACCCTCAGCCCAAGTTCCAAGAGTCAA...AGTCAGAACCTCAAGACCGTGCCTCTCTCCGGGCCGGCCCGTTCCATTTCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CAA 90 bp | TCTGTTTCAACTCTGTCAACACACAGGGCCACTGGGGACAGCCACTaGACTCTTGGAACTTGGGCTGAGGGTGTGGTTGCTGTGGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVSTLSTHRATGDSH*TLGTWAEGVVAVAA Trigger: AGCTGCCACAGCAACCACACCCTCAGCCCAAGTTCCAAGAGTCAAGTGGCTGTCCCCAGTGGCCCTGTGTGTTGACAGAGTTGAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAAATGCCAGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTGACCTCACCATTCTATCTGCATaGACACACGAGCACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: PNASRGTQRWVTGTGTDLTILSA*THEHTH Trigger: GTGTGTGTGCTCGTGTGTGCATGCAGATAGAATGGT...GAGGTCAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCTGGCATTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTAGTGCCAGTGTCGGGAATGGATGAAATGCACTGGGACTGGAACAGCCCGAGCAATGAATGCCAATaGATGCCACCCAGACCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLVPVSGMDEMHWDWNSPSNECQ*MPPRPR Trigger: CCTGGGTCTGGGTGGCATTCATTGGCATTCATTGCT...CGGGCTGTTCCAGTCCCAGTGCATTTCATCCATTCCCGACACTGGCACTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGCAGCTGCTGCCAGAGTGCGACTAGATGGGGGCACAGCCTCAGCTGTGGTTCTTCACATTTCTTCTaGTCAGAGTGGTTTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CGSCCQSATRWGHSLSCGSSHFF*SEWFAP Trigger: AGGAGCAAACCACTCTGAGCAGAAGAAATGTGAAGA...ACCACAGCTGAGGCTGTGCCCCCATCTAGTCGCACTCTGGCAGCAGCTGCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGGATCCACTCAGTAGATACCCCAGGATAGACCCTGAGGAAGGCAGGGATTCCTTAGATCCCTCCTaGGCCTGGCCCTCCCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KMDPLSRYPRIDPEEGRDSLDPS*AWPSLK Trigger: TTTTAGGGAGGGCCAGGCCCAGGAGGGATCTAAGGA...ATCCCTGCCTTCCTCAGGGTCTATCCTGGGGTATCTACTGAGTGGATCCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR GCA 90 bp | AATCCTGGGGAAATTCCACTGAACTTGGTGGCTGGTAATCTGGCCAGGATCCAACCAGCGATGCTTGTGTaGACAGTGACTTCTGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: NPGEIPLNLVAGNLARIQPAMLV*TVTSGG Trigger: ACCTCCAGAAGTCACTGTGCACACAAGCATCGCTGG...TTGGATCCTGGCCAGATTACCAGCCACCAAGTTCAGTGGAATTTCCCCAGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CAA 90 bp | CTTCCATGTCTCCTTGATGCCTCTAAGAGAGATCTTGGGCCTCAATaGCTATCACCACACCTCTCGGCATTAAAAGCTGGCAGACAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LPCLLDASKRDLGPQ*LSPHLSALKAGRQW Trigger: CCACTGTCTGCCAGCTTTTAATGCCGAGAGGTGTGGTGATAGCAATTGAGGCCCAAGATCTCTCTTAGAGGCATCAAGGAGACATGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCGGCCAGGATGGTTTCTGTCATTAGGTTAAACTATAAAGGACCGCAGGATGGAGGGAATGAGACTTaGGGAGTAGCCCAGTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: EPARMVSVIRLNYKGPQDGGNET*GVAQSL Trigger: CAATGACTGGGCTACTCCTCAAGTCTCATTCCCTCC...ATCCTGCGGTCCTTTATAGTTTAACCTAATGACAGAAACCATCCTGGCCGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGAAAGACCCAAGTTTCTCTACATGTTTCCTTATCGTTCTTCAGGGCTCTGATCCCTCCTGGGCCTaGCCCTCCCTAAAAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KQKDPSFSTCFLIVLQGSDPSWA*PSLKGG Trigger: TCCTCCTTTTAGGGAGGGCCAGGCCCAGGAGGGATC...AGAGCCCTGAAGAACGATAAGGAAACATGTAGAGAAACTTGGGTCTTTCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTCTTCTTCACCATTCTATCTGCATGCACACACGAGCACACACACACAGAGATCCTGCCTCCACTATaGCTTCACTGTGAATACTGG | + |
|
Preference number: 2 (lower is better) Translates to: GLFFTILSACTHEHTHTEILPPL*LHCEYW Trigger: CCAGTATTCACAGTGAAGCCATAGTGGAGGCAGGAT...CTCTGTGTGTGTGTGCTCGTGTGTGCATGCAGATAGAATGGTGAAGAAGAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR GCA 90 bp | CGTTTGCGACAAGTCAGGCACTCCAGTAGTTATTTCTTCCTTTCTTGGCTTCTTGGTACTGTCACTGACTaGTGTGTCCAGGGCTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RLRQVRHSSSYFFLSWLLGTVTD*CVQGWL Trigger: TAGCCAGCCCTGGACACAGCAGTCAGTGACAGTACC...AAGAAGCCAAGAAAGGAAGAAATAACTACTGGAGTGCCTGACTTGTCGCAAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR GCA 90 bp | CGTTTGCGACAAGTCAGGCACTCCAGTAGTTATTTCTTCCTTTCTTGGCTTCTTAAGGTGACAGGCAACTaGTGTGGCCCCTCCCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: RLRQVRHSSSYFFLSWLLKVTGN*CGPSHF Trigger: AAAGTGGGAGGGGCCACAGCAGTTGCCTGTCACCTT...AAGAAGCCAAGAAAGGAAGAAATAACTACTGGAGTGCCTGACTTGTCGCAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACTGGTACCAACTTTTTGTCTCAGCCCAGAGCACTTTCTCAGGATTTAATTCTTGGGCTGAGGGTGTaGTTGCTGTGGCAGCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: MTGTNFLSQPRALSQDLILGLRV*LLWQLL Trigger: CAGCAGCTGCCACAGCAACCACACCCTCAGCCCAAG...AATTAAATCCTGAGAAAGTGCTCTGGGCTGAGACAAAAAGTTGGTACCAGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CAA 90 bp | TTGGTGGCTGGTAATCTGGCCAGGATCCAAGAGAGGATGGTGACTTaGGACATTCCTGTTAACAAAGATTTTAGAGGAACGGTGGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LVAGNLARIQERMVT*DIPVNKDFRGTVGE Trigger: CTCACCCACCGTTCCTCTAAAATCTTTGTTAACAGGAATGTCCAAAGTCACCATCCTCTCTTGGATCCTGGCCAGATTACCAGCCACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CAA 90 bp | AATAAGGGTCCAAACCAACTGGACCCTTTCTGCTTCCATGTCTCCTaGATGCCTCTAAGAGAGATCTTGGGCCTCAATTGCTATCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: NKGPNQLDPFCFHVS*MPLREILGLNCYHH Trigger: GTGGTGATAGCAATTGAGGCCCAAGATCTCTCTTAGAGGCATCAAGGAGACATGGAAGCAGAAAGGGTCCAGTTGGTTTGGACCCTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTCTTCTTCACCATTCTATCTGCATGCACACACGAGCACACACACACAGAGGCACATGGAAACAACTaGTTCAAAGGAATGATACAG | + |
|
Preference number: 2 (lower is better) Translates to: GLFFTILSACTHEHTHTEAHGNN*FKGMIQ Trigger: CTGTATCATTCCTTTGAATCAGTTGTTTCCATGTGC...CTCTGTGTGTGTGTGCTCGTGTGTGCATGCAGATAGAATGGTGAAGAAGAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR TCA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAAGGAGATAAGGTTGTTTaGGACACACTCAGCCCCATC | + |
|
Preference number: 2 (lower is better) Translates to: ISRPCQDVNVGAFLKITEGDKVV*DTLSPI Trigger: GATGGGGCTGAGTGTGTCTCAAACAACCTTATCTCC...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCGGCCAGGATGGTTTCTGTCATTAGGTTAAACTATAAAGGACCGCAGGATAGACTGTTTCTTTCCTaGCTCACACTCCTTAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: EPARMVSVIRLNYKGPQDRLFLS*LTLLRS Trigger: GGATCTAAGGAGTGTGAGGCAGGAAAGAAACAGTCT...ATCCTGCGGTCCTTTATAGTTTAACCTAATGACAGAAACCATCCTGGCCGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTGCTTATCTGTCTGTCTaGCACACACAGTGCCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKALNCDPRGGQTVNTLAAYLSV*HTQCLK Trigger: CTTCAGGCACTGTGTGTGGCAGACAGACAGATAAGC...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGAAAGACCCAAGTTTCTCTACATGTTTCCTTATCGTTCTTCAGGGCTCTGTGCACAGTGACTTCTaGAGGTCTTGGCACCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KQKDPSFSTCFLIVLQGSVHSDF*RSWHPY Trigger: GTAAGGGTGCCAAGACCTCCAGAAGTCACTGTGCAC...AGAGCCCTGAAGAACGATAAGGAAACATGTAGAGAAACTTGGGTCTTTCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CAA 90 bp | GTGATCGCATTCCCCTCGTCTGCATCTCCCAGGATTAGTACAGTTTaGTCAGCCTGTATTGTAAGCTGTGTTCTTTCAACTCACTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VIAFPSSASPRISTV*SACIVSCVLSTHFP Trigger: AGGAAAGTGAGTTGAAAGAACACAGCTTACAATACAGGCTGACAAAACTGTACTAATCCTGGGAGATGCAGACGAGGGGAATGCGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATGCACACTGGGGAAATTCCACTaGACTTGGTGGCTGGTAATC | + |
|
Preference number: 2 (lower is better) Translates to: MFPYRSSGLFFTILSACTLGKFH*TWWLVI Trigger: GATTACCAGCCACCAAGTTCAGTGGAATTTCCCCAG...TGTGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR TCA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAAATGATTGTACAGTCATaGGAACCCAGCGACCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: ISRPCQDVNVGAFLKITEMIVQS*EPSDHL Trigger: CAGATGGTCGCTGGGTTCTCATGACTGTACAATCAT...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTGCAATCAATATTTACAGATAAAGCACACAGAAGAGAGTGTGTTCACAGTTTGTGGTACTGTCACTaGCTGCTGTGTCCAGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KLQSIFTDKAHRRECVHSLWYCH*LLCPGL Trigger: CAGCCCTGGACACAGCAGTCAGTGACAGTACCACAA...ACTGTGAACACACTCTCTTCTGTGTGCTTTATCTGTAAATATTGATTGCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCAAGAAAACATAGGAATATCTGCACTAAATAAGGGTCCAAACCAACTGGACAAGACTTGGGGTGGGTaGGGGGTCTATCTGGTATGT | + |
|
Preference number: 2 (lower is better) Translates to: YQENIGISALNKGPNQLDKTWGG*GVYLVC Trigger: ACATACCAGATAGACCCCCCACCCACCCCAAGTCTT...GTCCAGTTGGTTTGGACCCTTATTTAGTGCAGATATTCCTATGTTTTCTTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGCAATCAATATTTACAGATAAAGCACACAGAAGAGAGTGTGTTCACAGTGTCTGCCACACACAGTaGCTGAAGAACTGCCACGAT | + |
|
Preference number: 2 (lower is better) Translates to: KLQSIFTDKAHRRECVHSVCHTQ*LKNCHD Trigger: ATCGTGGCAGTTCTTCAGGCACTGTGTGTGGCAGAC...ACTGTGAACACACTCTCTTCTGTGTGCTTTATCTGTAAATATTGATTGCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR GCA 90 bp | CGTTTGCGACAAGTCAGGCACTCCAGTAGTTATTTCTTCCTTTCTTGGCTTCTTTTGCTTTTGTTTCCTTaGAACCTGGAGGATCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RLRQVRHSSSYFFLSWLLLLLFP*NLEDHR Trigger: TCTGTGATCCTCCAGGTTGCAAGGAAACAAAAGCAA...AAGAAGCCAAGAAAGGAAGAAATAACTACTGGAGTGCCTGACTTGTCGCAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGACTGGTACCAACTTTTTGTCTCAGCCCAGAGCACTTTCTCAGGATTTAATTCACTTTCCTGTTCATTaGGCATCCTGGCAAAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: MTGTNFLSQPRALSQDLIHFPVH*ASWQKI Trigger: GATCTTTTGCCAGGATGCTCAATGAACAGGAAAGTG...AATTAAATCCTGAGAAAGTGCTCTGGGCTGAGACAAAAAGTTGGTACCAGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAAACGGTCTTGAGGTTCTaGCTCAGTCAATTTTCTATT | + |
|
Preference number: 2 (lower is better) Translates to: ISRPCQDVNVGAFLKITETVLRF*LSQFSI Trigger: AATAGAAAATTGACTGAGTCAGAACCTCAAGACCGT...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACTGGTACCAACTTTTTGTCTCAGCCCAGAGCACTTTCTCAGGATTTAATTATAAGACTCAAAGCTTaGCAGAAACCCCGGAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: MTGTNFLSQPRALSQDLIIRLKA*QKPRNP Trigger: TGGATTCCGGGGTTTCTGCCAAGCTTTGAGTCTTAT...AATTAAATCCTGAGAAAGTGCTCTGGGCTGAGACAAAAAGTTGGTACCAGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATGTTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATGCATGTTTCAGTAAATCCTaGGGAAATTCCACTGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: TCFLIVLQGSSSPFYLHACFSKS*GNSTEL Trigger: AAGTTCAGTGGAATTTCCCCAGGATTTACTGAAACA...TGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGCAATCAATATTTACAGATAAAGCACACAGAAGAGAGTGTGTTCACAGTAACTGTGAACACACTTaGTTTTGTTTCCTTGCAACC | + |
|
Preference number: 2 (lower is better) Translates to: KLQSIFTDKAHRRECVHSNCEHT*FCFLAT Trigger: GGTTGCAAGGAAACAAAAGCAAGTGTGTTCACAGTT...ACTGTGAACACACTCTCTTCTGTGTGCTTTATCTGTAAATATTGATTGCAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CCA 72 bp | GGTTGCTGTGGCAGCTGCTGCCAGAGTGCGACTAGATaGGGGCACAGCCTCAGCTGTGGTGAAGGTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCCGSCCQSATR*GHSLSCGEGDR Trigger: CCTGTCACCTTCACCACAGCTGAGGCTGTGCCCCCATCTAGTCGCACTCTGGCAGCAGCTGCCACAGCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 72 bp | GTGTGGGAGAGGGAGGAGGGCTTGTGGTACTGTCACTaGCTGCTGTGTCCAGGGCTGGCTAGGCCTGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: VWEREEGLWYCH*LLCPGLARPGI Trigger: AATACCAGGCCTAGCCAGCCCTGGACACAGCAGTCAGTGACAGTACCACAAGCCCTCCTCCCTCTCCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR GCA 72 bp | GGGAGAGGGAGGAGGGCTTGTGGTACTGTCACTGACTaGTGTGTCCAGGGCTGGCTAGGCCTGGTATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GRGRRACGTVTD*CVQGWLGLVFT Trigger: TGTGAATACCAGGCCTAGCCAGCCCTGGACACAGCAGTCAGTGACAGTACCACAAGCCCTCCTCCCTCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 72 bp | CAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTaGCCTCTGACCCTTCACCCTCCTGAACTTCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QRDPEMGHWDRD*PLTLHPPELLM Trigger: CATGAGAAGTTCAGGAGGGTGAAGGGTCAGAGGTCAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | CTCTGTCAACACACAGGGCCACTGGGGACAGCCACTTaGCTCTTGGAACTTGGGCTGAGGGTGTGGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCQHTGPLGTAT*LLELGLRVWLL Trigger: CAGCAACCACACCCTCAGCCCAAGTTCCAAGAGTCAAGTGGCTGTCCCCAGTGGCCCTGTGTGTTGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAACCAAATGCCAGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTGTACAGTCCTCCCCTGTaGTACCTAGGGGTACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNQMPAEGPRDGSLGQGLYSPPL*YLGVPR Trigger: TCTTGGTACCCCTAGGTACAACAGGGGAGGACTGTA...CAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCTGGCATTTGGTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | ACCCAGAGATGGGTCACTGGGACAGGGACTGACCTCTaGCCCTTCACCCTCCTGAACTTCTCATGCCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: TQRWVTGTGTDL*PFTLLNFSCLI Trigger: GATCAGGCATGAGAAGTTCAGGAGGGTGAAGGGTCAGAGGTCAGTCCCTGTCCCAGTGACCCATCTCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CCA 72 bp | GTGCCAGTGTCGGGAATGGATGAAATGCACTGGGACTaGAACAGCCCGTCTTCCTTTCCCAGGTATCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VPVSGMDEMHWD*NSPSSFPRYPQ Trigger: CTGAGGATACCTGGGAAAGGAAGACGGGCTGTTCCAGTCCCAGTGCATTTCATCCATTCCCGACACTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR GCA 72 bp | GAGAGTATACCATCACGAGAGAGACTGTTTCTTTCCTaGCTCACACTCCTTAGATCCCTCCTGGGCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ESIPSRERLFLS*LTLLRSLLGLA Trigger: GGCCAGGCCCAGGAGGGATCTAAGGAGTGTGAGGCAGGAAAGAAACAGTCTCTCTCGTGATGGTATACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CCA 72 bp | ACAGTGACTTCTGGAGGTCTTGGCACCCTTACGAGCTaGGTGTCTAGCCTGGCAGTAAGGCTGAGACATCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVTSGGLGTLTS*VSSLAVRLRHH Trigger: ATGATGTCTCAGCCTTACTGCCAGGCTAGACACCCAGCTCGTAAGGGTGCCAAGACCTCCAGAAGTCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | TGGCAGAAACCCCGGAATCCATGTGATATGGACCTGTaGCTTCCTGGGCTTATCTGTCTGTCTGCCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: WQKPRNPCDMDL*LPGLICLSATH Trigger: GTGTGTGGCAGACAGACAGATAAGCCCAGGAAGTCACAGGTCCATATCACATGGATTCCGGGGTTTCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCCACAGTTACCTCACCAGCACTCCGAGGTATGGCACATGGAAACAACTGGGAGTAGCCCAGTCATaGAGAAGACTCAGAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: AAHSYLTSTPRYGTWKQLGVAQS*RRLRTV Trigger: TACAGTTCTGAGTCTTCTCAATGACTGGGCTACTCC...CAGTTGTTTCCATGTGCCATACCTCGGAGTGCTGGTGAGGTAACTGTGGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAATTCCACTGAACTTGGTGGCTGGTAATCTGGCCAGGATCCAAGAGAGGATGGGTATGTTGCTGGTGTaGAACCTGTCCTCCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EIPLNLVAGNLARIQERMGMLLV*NLSSPD Trigger: GTCTGGGGAGGACAGGTTCAACACCAGCAACATACC...CATCCTCTCTTGGATCCTGGCCAGATTACCAGCCACCAAGTTCAGTGGAATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAAATGCCAGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTGACCTCATCAACATGAAACATTaGCCAAAGGTACATACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PNASRGTQRWVTGTGTDLINMKH*PKVHTK Trigger: CTTGGTATGTACCTTTGGCAAATGTTTCATGTTGAT...GAGGTCAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCTGGCATTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | TTCTTCACATTTCTTCTGCTCAGAGTGGTTTGCTCCTaGGTAGGGGTCCAGCGGAGCCTTGGAGCACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: FFTFLLLRVVCS*VGVQRSLGALS Trigger: AGATAGTGCTCCAAGGCTCCGCTGGACCCCTACTCAGGAGCAAACCACTCTGAGCAGAAGAAATGTGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 72 bp | AAATGGAACGGGCCGGCCCGGAGAGAGGCACGGTCTTaGGGTTCTGACTCAGTCAATTTTCTATTGAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KWNGPARREARS*GSDSVNFLLSH Trigger: ATGACTCAATAGAAAATTGACTGAGTCAGAACCTCAAGACCGTGCCTCTCTCCGGGCCGGCCCGTTCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR GCA 72 bp | CGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATaGACACACGAGCACACACACACAGAGGCACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSSGLFFTILSA*THEHTHTEAHR Trigger: TCTGTGTGCCTCTGTGTGTGTGTGCTCGTGTGTGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CCA 72 bp | TCAAAGCTTGGCAGAAACCCCGGAATCCATGTGATATaGACCTGTGACTTCCTGGGCTTATCTGTCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SKLGRNPGIHVI*TCDFLGLSVCL Trigger: CAGACAGACAGATAAGCCCAGGAAGTCACAGGTCCATATCACATGGATTCCGGGGTTTCTGCCAAGCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTGCGACAAGTCAGGCACTCCAGTAGTTATTTCTTCCTTTCTTGGCTTCTTAAAGATCCCACGTTGTaGCGTGGCCTCCTGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RLRQVRHSSSYFFLSWLLKDPTL*RGLLEK Trigger: CTTCTCCAGGAGGCCACGCAACAACGTGGGATCTTT...AAGAAGCCAAGAAAGGAAGAAATAACTACTGGAGTGCCTGACTTGTCGCAAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR GCA 72 bp | ACTTCCTGGGCTTATCTGTCTGTCTGCCACACACAGTaGCTGAAGAACTGCCACGATACTATCTTCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TSWAYLSVCHTQ*LKNCHDTIFLS Trigger: ACTTAGGAAGATAGTATCGTGGCAGTTCTTCAGGCACTGTGTGTGGCAGACAGACAGATAAGCCCAGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CCA 72 bp | CACAGTTACCTCACCAGCACTCCGAGGTATGGCACATaGAAACAACTGATTCAAAGGAATGATACAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSYLTSTPRYGT*KQLIQRNDTGQ Trigger: CTGCCCTGTATCATTCCTTTGAATCAGTTGTTTCCATGTGCCATACCTCGGAGTGCTGGTGAGGTAACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR GCA 72 bp | GCACTAAATAAGGGTCCAAACCAACTGGACCCTTTCTaGTTCCATGTCTCCTTGATGCCTCTAAGAGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: ALNKGPNQLDPF*FHVSLMPLREI Trigger: GATCTCTCTTAGAGGCATCAAGGAGACATGGAAGCAGAAAGGGTCCAGTTGGTTTGGACCCTTATTTAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CCA 72 bp | TGGACATTCCTGTTAACAAAGATTTTAGAGGAACGGTaGGTGAGCCGGCCAGGATGGTTTCTGTCATTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WTFLLTKILEER*VSRPGWFLSLG Trigger: ACCTAATGACAGAAACCATCCTGGCCGGCTCACCCACCGTTCCTCTAAAATCTTTGTTAACAGGAATGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | ACTGTAATTTTGAGGATAACGAGCAATGAATGCCAATaGATGCCACCCAGACCCAGGACAGACAGAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TVILRITSNECQ*MPPRPRTDRAK Trigger: CTTTGCTCTGTCTGTCCTGGGTCTGGGTGGCATTCATTGGCATTCATTGCTCGTTATCCTCAAAATTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CCA 72 bp | TCAATTGCTATCACCACACCTCTCGGCATTAAAAGCTaGCAGACAGTGGAAGGCATACACAGAAGGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SIAITTPLGIKS*QTVEGIHRREN Trigger: ATTTTCCCTTCTGTGTATGCCTTCCACTGTCTGCCAGCTTTTAATGCCGAGAGGTGTGGTGATAGCAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | AAGACTCAGAACTGTAATTTTGAGGATAACGAGCAATaGATGCCAATGAATGCCACCCAGACCCAGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KTQNCNFEDNEQ*MPMNATQTQDR Trigger: TCTGTCCTGGGTCTGGGTGGCATTCATTGGCATTCATTGCTCGTTATCCTCAAAATTACAGTTCTGAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | TCACCAGCACTCCGAGGTATGGCACATGGAAACAACTaGTTCAAAGGAATGATACAGGGCAGATTACTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SPALRGMAHGNN*FKGMIQGRLLD Trigger: ATCAAGTAATCTGCCCTGTATCATTCCTTTGAATCAGTTGTTTCCATGTGCCATACCTCGGAGTGCTGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR TCA 72 bp | TGGCTGGTAATCTGGCCAGGATCCAAGAGAGGATGGTaGCTTTGGACATTCCTGTTAACAAAGATTTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WLVIWPGSKRGW*LWTFLLTKILE Trigger: CTCTAAAATCTTTGTTAACAGGAATGTCCAAAGTCACCATCCTCTCTTGGATCCTGGCCAGATTACCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGACTGGTACCAACTTTTTGTCTCAGCCCAGAGCACTTTCTCAGGATTTAATTAATAAGACTCAAAGCTaGGCAGAAACCCCGGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: MTGTNFLSQPRALSQDLINKTQS*AETPES Trigger: GGATTCCGGGGTTTCTGCCAAGCTTTGAGTCTTATT...AATTAAATCCTGAGAAAGTGCTCTGGGCTGAGACAAAAAGTTGGTACCAGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR TCA 72 bp | CACAGTATTGTGTTTGTAAATCTCGGTATCTGGTGCTaGGCTTCTTCCATCTGCATAAGATGGATCCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: HSIVFVNLGIWC*ASSICIRWIHS Trigger: TGAGTGGATCCATCTTATGCAGATGGAAGAAGCTCAGCACCAGATACCGAGATTTACAAACACAATACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR-3UTR CAA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAACTTTCCTTGAATTTATaGAATGGCCATAGTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ISRPCQDVNVGAFLKITELSLNL*NGHSQG Trigger: ACCCTGACTATGGCCATTCAATAAATTCAAGGAAAG...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCAAGAAAACATAGGAATATCTGCACTAAATAAGGGTCCAAACCAACTGGACGAGAGGATGGTGACTTaGGACATTCCTGTTAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: YQENIGISALNKGPNQLDERMVT*DIPVNK Trigger: TTTGTTAACAGGAATGTCCAAAGTCACCATCCTCTC...GTCCAGTTGGTTTGGACCCTTATTTAGTGCAGATATTCCTATGTTTTCTTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR GCA 72 bp | CATTTATTTAACAGAAGAAAAATTACGGCATCTTTCTaGCATGACTCCAACCTTCTCCCATTGTATTATACA | + |
|
Preference number: 3 (lower is better) Translates to: HLFNRRKITASF*HDSNLLPLYYT Trigger: TGTATAATACAATGGGAGAAGGTTGGAGTCATGGCAGAAAGATGCCGTAATTTTTCTTCTGTTAAATAAATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | AGCAACCAAATGCCAGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTGGGGCCAGGCAGCTGGTaGTTGTCCACACCCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SNQMPAEGPRDGSLGQGLGPGSW*LSTPCR Trigger: ACGGCAGGGTGTGGACAAGCACCAGCTGCCTGGCCC...CAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCTGGCATTTGGTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR GCA 90 bp | CCAAATGCCAGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTGACCTCGGGGACAGGGACTCCTaGGGCAGACATGCAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PNASRGTQRWVTGTGTDLGDRDS*GRHAGY Trigger: ATACCCTGCATGTCTGCCGCAGGAGTCCCTGTCCCC...GAGGTCAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCTGGCATTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR GCA 90 bp | TGTGGCAGCTGCTGCCAGAGTGCGACTAGATGGGGGCACAGCCTCAGCTGTGGTTGCATGCGCACAGTGTaGATGGCATGGCCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CGSCCQSATRWGHSLSCGCMRTV*MAWPMY Trigger: GTACATGGGCCATGCCATGCACACTGTGCGCATGCA...ACCACAGCTGAGGCTGTGCCCCCATCTAGTCGCACTCTGGCAGCAGCTGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGTGCCAGTGTCGGGAATGGATGAAATGCACTGGGACTGGAACAGCCCGTCTGGACGAGGCTGGTaGGAGGGCCAGGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLVPVSGMDEMHWDWNSPSGRGW*EGQAAG Trigger: ACCAGCTGCCTGGCCCTCCCACCAGCCTCGTCCAGA...CGGGCTGTTCCAGTCCCAGTGCATTTCATCCATTCCCGACACTGGCACTAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGTGCCAGTGTCGGGAATGGATGAAATGCACTGGGACTGGAACAGCCCGCCGCAGAGGCTCCACTaGCGTACTCTGGCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLVPVSGMDEMHWDWNSPPQRLH*RTLASG Trigger: GCCAGAAGCCAGAGTACGCCAGTGGAGCCTCTGCGG...CGGGCTGTTCCAGTCCCAGTGCATTTCATCCATTCCCGACACTGGCACTAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR TCA 90 bp | AGCAACCAAATGCCAGCAGAGGGACCCAGAGATGGGTCACTGGGACAGGGACTGAGAGTTCAGCCAGGCTaGGAAACAGAGACAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNQMPAEGPRDGSLGQGLRVQPG*ETETVQ Trigger: CTGGACTGTCTCTGTTTCTCAGCCTGGCTGAACTCT...CAGTCCCTGTCCCAGTGACCCATCTCTGGGTCCCTCTGCTGGCATTTGGTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR TCA 90 bp | ACAGAGATGGATGGGCATGCACACACAAACACACACACACACACACACACACACAGTCAGGGGGAGGAGTaGGGCTCTGGACGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEMDGHAHTNTHTHTHTHSQGEE*GSGRGW Trigger: CCAGCCTCGTCCAGAGCCTCACTCCTCCCCCTGACT...GTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCATGCCCATCCATCTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGCCCCTCCCACTTTCCTGTTCATTGAGCATCCTGGCAAAAGATCCCACAGTGGCCAGAGCGTCTaGATTCTTCCGGGAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVAPPTFLFIEHPGKRSHSGQSV*ILPGAH Trigger: ATGGGCTCCCGGAAGAATCCAGACGCTCTGGCCACT...GTGGGATCTTTTGCCAGGATGCTCAATGAACAGGAAAGTGGGAGGGGCCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | AAGGACCAAGGATACCCCTTTAAGACTGGGAGGAAGGAGATGCAGCCAAGGGCAGGCAACCAGGCTGAATaGTATCGCACCGGAAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KDQGYPFKTGRKEMQPRAGNQAE*YRTGSR Trigger: CCGACTTCCGGTGCGATACCATTCAGCCTGGTTGCC...TGCCCTTGGCTGCATCTCCTTCCTCCCAGTCTTAAAGGGGTATCCTTGGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CAA 72 bp | TGTTCATTGAGCATCCTGGCAAAAGATCCCACGTTGTaGCGTGGCCTCCTGGAGAAGCAGCTGAGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLSILAKDPTL*RGLLEKQLREE Trigger: CTCCTCCCTCAGCTGCTTCTCCAGGAGGCCACGCAACAACGTGGGATCTTTTGCCAGGATGCTCAATGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGCCCCTCCCACTTTCCTGTTCATTGAGCATCCTGGCAAAAGATCCCACAGAGTTCAGCCAGGCTaGGAAACAGAGACAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVAPPTFLFIEHPGKRSHRVQPG*ETETVQ Trigger: CTGGACTGTCTCTGTTTCTCAGCCTGGCTGAACTCT...GTGGGATCTTTTGCCAGGATGCTCAATGAACAGGAAAGTGGGAGGGGCCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTGGCTCTGGACGAGGCTaGTGGGAGGGCCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKALNCDPRGGQTVNTLAGSGRG*WEGQAA Trigger: AGCTGCCTGGCCCTCCCACCAGCCTCGTCCAGAGCC...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CAA 72 bp | AGGCAACTGCTGTGGCCCCTCCCACTTTCCTGTTCATaGAGCATCCTGGCAAAAGATCCCACGTTGTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQLLWPLPLSCS*SILAKDPTLLR Trigger: ACGCAACAACGTGGGATCTTTTGCCAGGATGCTCAATGAACAGGAAAGTGGGAGGGGCCACAGCAGTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCACAGTTACCTCACCAGCACTCCGAGGTATGGCACATGGAAACAACTGTCTGCTTTTCCTGCATaGGCACAGTGTGCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAHSYLTSTPRYGTWKQLSAFPA*AQCAWH Trigger: ATGCCATGCACACTGTGCGCATGCAGGAAAAGCAGA...CAGTTGTTTCCATGTGCCATACCTCGGAGTGCTGGTGAGGTAACTGTGGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAAGGGCCAGGCAGCTGGTaGTTGTCCACACCCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISRPCQDVNVGAFLKITEGPGSW*LSTPCR Trigger: ACGGCAGGGTGTGGACAAGCACCAGCTGCCTGGCCC...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATGCACAGGCTCTGGACGAGGCTaGTGGGAGGGCCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MFPYRSSGLFFTILSACTGSGRG*WEGQAA Trigger: AGCTGCCTGGCCCTCCCACCAGCCTCGTCCAGAGCC...TGTGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTAGGACTCAGCAGCGGTaGCCAGGACCAGCATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKALNCDPRGGQTVNTLARTQQR*PGPACG Trigger: TCCGCATGCTGGTCCTGGGCACCGCTGCTGAGTCCT...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTGGGGAAATTCCACTGAACTTGGTGGCTGGTAATCTGGCCAGGATCCAATGCATGCGCACAGTGTaGATGGCATGGCCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NPGEIPLNLVAGNLARIQCMRTV*MAWPMY Trigger: GTACATGGGCCATGCCATGCACACTGTGCGCATGCA...TTGGATCCTGGCCAGATTACCAGCCACCAAGTTCAGTGGAATTTCCCCAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR GCA 90 bp | ATTCTTCACATTTCTTCTGCTCAGAGTGGTTTGCTCCTGAGTAGGGGTCCAGCGCTCCTGCGGCAGACATaGAGGGTATCCAGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILHISSAQSGLLLSRGPALLRQT*RVSRKI Trigger: GATCTTCCTGGATACCCTGCATGTCTGCCGCAGGAG...CGCTGGACCCCTACTCAGGAGCAAACCACTCTGAGCAGAAGAAATGTGAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCGGCCAGGATGGTTTCTGTCATTAGGTTAAACTATAAAGGACCGCAGGATAGTGGCCAGAGCGTCTaGATTCTTCCGGGAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPARMVSVIRLNYKGPQDSGQSV*ILPGAH Trigger: ATGGGCTCCCGGAAGAATCCAGACGCTCTGGCCACT...ATCCTGCGGTCCTTTATAGTTTAACCTAATGACAGAAACCATCCTGGCCGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATCCACTCAGTAGATACCCCAGGATAGACCCTGAGGAAGGCAGGGATGATGAAGCCTTCCCCTaGAATCTGCTCCTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KMDPLSRYPRIDPEEGRDDEAFP*NLLLVW Trigger: CCAAACCAGGAGCAGATTCCAGGGGAAGGCTTCATC...ATCCCTGCCTTCCTCAGGGTCTATCCTGGGGTATCTACTGAGTGGATCCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAACCGCAGAGGCTCCACTaGCGTACTCTGGCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISRPCQDVNVGAFLKITEPQRLH*RTLASG Trigger: GCCAGAAGCCAGAGTACGCCAGTGGAGCCTCTGCGG...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATGCAAGGACTCAGCAGCGGTaGCCAGGACCAGCATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCFLIVLQGSSSPFYLHARTQQR*PGPACG Trigger: TCCGCATGCTGGTCCTGGGCACCGCTGCTGAGTCCT...TGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGCCCCTCCCACTTTCCTGTTCATTGAGCATCCTGGCAAAAGATCCCACAATTTCTGCTTTTCCTaGATGCGCACAGTGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AVAPPTFLFIEHPGKRSHNFCFS*MRTVCM Trigger: CATGCACACTGTGCGCATGCAGGAAAAGCAGAAATT...GTGGGATCTTTTGCCAGGATGCTCAATGAACAGGAAAGTGGGAGGGGCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCGGCCAGGATGGTTTCTGTCATTAGGTTAAACTATAAAGGACCGCAGGATCCACCTCCATGGTGGTaGGGATCAGAATGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPARMVSVIRLNYKGPQDPPPWW*GSEWCR Trigger: TCTGCACCATTCTGATCCGCACCACCATGGAGGTGG...ATCCTGCGGTCCTTTATAGTTTAACCTAATGACAGAAACCATCCTGGCCGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAGATGGATGGGCATGCACACACAAACACACACACACACACACACACACACTGCGCACAGTGTGCATaGCATGGCCCATGTACACTA | + |
|
Preference number: 4 (lower is better) Translates to: TEMDGHAHTNTHTHTHTHCAQCA*HGPCTL Trigger: TAGTGTACATGGGCCATGCCATGCACACTGTGCGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCATGCCCATCCATCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATCCACTCAGTAGATACCCCAGGATAGACCCTGAGGAAGGCAGGGATAACATAACAGTTGACTaGGTGGGGACAGGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMDPLSRYPRIDPEEGRDNITVD*VGTGTP Trigger: AGGAGTCCCTGTCCCCACCCAGTCAACTGTTATGTT...ATCCCTGCCTTCCTCAGGGTCTATCCTGGGGTATCTACTGAGTGGATCCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGCCCCTCCCACTTTCCTGTTCATTGAGCATCCTGGCAAAAGATCCCACAGACATTCTTCTCCGTaGGCCTCGAAACATAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVAPPTFLFIEHPGKRSHRHSSP*ASKHNS Trigger: ACTGTTATGTTTCGAGGCCCACGGAGAAGAATGTCT...GTGGGATCTTTTGCCAGGATGCTCAATGAACAGGAAAGTGGGAGGGGCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CAA 72 bp | CTGTTAATTCTTCACATTTCTTCTGCTCAGAGTGGTTaGCTCCTGAGTAGGGGTCCAGCGGAGCCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLILHISSAQSG*LLSRGPAEPWS Trigger: GCTCCAAGGCTCCGCTGGACCCCTACTCAGGAGCAAACCACTCTGAGCAGAAGAAATGTGAAGAATTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGTATACCATCACGAGAGAGACTGTTTCTTTCCTGCCTCACACTCCTTAGACCTTCCCCTGGAATCTaGTCCTGGTTTGGCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESIPSRERLFLSCLTLLRPSPGI*SWFGTS Trigger: GGAAGTGCCAAACCAGGAGCAGATTCCAGGGGAAGG...TCTAAGGAGTGTGAGGCAGGAAAGAAACAGTCTCTCTCGTGATGGTATACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | CGTTTGCGACAAGTCAGGCACTCCAGTAGTTATTTCTTCCTTTCTTGGCTTCTTGGCAACCAGGCTGAATaGTATCGCACCGGAAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLRQVRHSSSYFFLSWLLGNQAE*YRTGSR Trigger: CCGACTTCCGGTGCGATACCATTCAGCCTGGTTGCC...AAGAAGCCAAGAAAGGAAGAAATAACTACTGGAGTGCCTGACTTGTCGCAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTAGGCCACCTCCATGGTaGTGCGGATCAGAATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKALNCDPRGGQTVNTLARPPPW*CGSEWC Trigger: GCACCATTCTGATCCGCACCACCATGGAGGTGGCCT...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CAA 72 bp | TGCTTCCATGTCTCCTTGATGCCTCTAAGAGAGATCTaGGGCCTCAATTGCTATCACCACACCTCTCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFHVSLMPLREI*GLNCYHHTSRH Trigger: ATGCCGAGAGGTGTGGTGATAGCAATTGAGGCCCAAGATCTCTCTTAGAGGCATCAAGGAGACATGGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCACATTTCTTCTGCTCAGAGTGGTTTGCTCCTGAGTAGGGGTCCAGCGGCGTGGACACAAAGATaGTCTGCAGTACCCAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILHISSAQSGLLLSRGPAAWTQR*SAVPNN Trigger: GTTATTGGGTACTGCAGATCATCTTTGTGTCCACGC...CGCTGGACCCCTACTCAGGAGCAAACCACTCTGAGCAGAAGAAATGTGAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | AAGATGGATCCACTCAGTAGATACCCCAGGATAGACCCTGAGGAAGGCAGGGATAATTTCTGCTTTTCCTaGATGCGCACAGTGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KMDPLSRYPRIDPEEGRDNFCFS*MRTVCM Trigger: CATGCACACTGTGCGCATGCAGGAAAAGCAGAAATT...ATCCCTGCCTTCCTCAGGGTCTATCCTGGGGTATCTACTGAGTGGATCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTCCACCTCCATGGTGGTaGGGATCAGAATGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKALNCDPRGGQTVNTLAPPPWW*GSEWCR Trigger: TCTGCACCATTCTGATCCGCACCACCATGGAGGTGG...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTCCTTCCCCTGGAATCTaGTCCTGGTTTGGCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKALNCDPRGGQTVNTLAPSPGI*SWFGTS Trigger: GGAAGTGCCAAACCAGGAGCAGATTCCAGGGGAAGG...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGATGGATGGGCATGCACACACAAACACACACACACACACACACACACACACAGTGTGCATGGCATaGCCCATGTACACTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEMDGHAHTNTHTHTHTHTVCMA*PMYTRE Trigger: TTCTCTAGTGTACATGGGCCATGCCATGCACACTGT...GTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCATGCCCATCCATCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATGCACAAGGCCACCTCCATGGTaGTGCGGATCAGAATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MFPYRSSGLFFTILSACTRPPPW*CGSEWC Trigger: GCACCATTCTGATCCGCACCACCATGGAGGTGGCCT...TGTGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATCCACTCAGTAGATACCCCAGGATAGACCCTGAGGAAGGCAGGGATAGACATTCTTCTCCGTaGGCCTCGAAACATAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KMDPLSRYPRIDPEEGRDRHSSP*ASKHNS Trigger: ACTGTTATGTTTCGAGGCCCACGGAGAAGAATGTCT...ATCCCTGCCTTCCTCAGGGTCTATCCTGGGGTATCTACTGAGTGGATCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCAATCAATATTTACAGATAAAGCACACAGAAGAGAGTGTGTTCACAGTTCTGGACGAGGCTGGTaGGAGGGCCAGGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLQSIFTDKAHRRECVHSSGRGW*EGQAAG Trigger: ACCAGCTGCCTGGCCCTCCCACCAGCCTCGTCCAGA...ACTGTGAACACACTCTCTTCTGTGTGCTTTATCTGTAAATATTGATTGCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGAAAGACCCAAGTTTCTCTACATGTTTCCTTATCGTTCTTCAGGGCTCTACTGTGGAGTGCTTGTaGACCTCCTCCAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQKDPSFSTCFLIVLQGSTVECL*TSSRNS Trigger: GGAGTTCCTGGAGGAGGTCCACAAGCACTCCACAGT...AGAGCCCTGAAGAACGATAAGGAAACATGTAGAGAAACTTGGGTCTTTCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTTGCGCACAGTGTGCATaGCATGGCCCATGTACACTA | + |
|
Preference number: 4 (lower is better) Translates to: LKALNCDPRGGQTVNTLACAQCA*HGPCTL Trigger: TAGTGTACATGGGCCATGCCATGCACACTGTGCGCA...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAAGATGAAGCCTTCCCCTaGAATCTGCTCCTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISRPCQDVNVGAFLKITEDEAFP*NLLLVW Trigger: CCAAACCAGGAGCAGATTCCAGGGGAAGGCTTCATC...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCAATCAATATTTACAGATAAAGCACACAGAAGAGAGTGTGTTCACAGTGGGGACAGGGACTCCTaGGGCAGACATGCAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQSIFTDKAHRRECVHSGDRDS*GRHAGY Trigger: ATACCCTGCATGTCTGCCGCAGGAGTCCCTGTCCCC...ACTGTGAACACACTCTCTTCTGTGTGCTTTATCTGTAAATATTGATTGCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGGCCCTGCCAGGATGTGAATGTGGGTGCTTTCCTCAAAATAACTGAAAAATCCCCCAGACCTTaGTTTGCTGCTGGCCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: ISRPCQDVNVGAFLKITEKSPRP*FAAGLT Trigger: AGTAAGGCCAGCAGCAAAGCAAGGTCTGGGGGATTT...TTCAGTTATTTTGAGGAAAGCACCCACATTCACATCCTGGCAGGGCCTTGATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CCA 90 bp | ATGACTGGTACCAACTTTTTGTCTCAGCCCAGAGCACTTTCTCAGGATTTAATTACTGTGGAGTGCTTGTaGACCTCCTCCAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTGTNFLSQPRALSQDLITVECL*TSSRNS Trigger: GGAGTTCCTGGAGGAGGTCCACAAGCACTCCACAGT...AATTAAATCCTGAGAAAGTGCTCTGGGCTGAGACAAAAAGTTGGTACCAGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR GCA 90 bp | TACCAAGAAAACATAGGAATATCTGCACTAAATAAGGGTCCAAACCAACTGGACCTCCTGCGGCAGACATaGAGGGTATCCAGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YQENIGISALNKGPNQLDLLRQT*RVSRKI Trigger: GATCTTCCTGGATACCCTGCATGTCTGCCGCAGGAG...GTCCAGTTGGTTTGGACCCTTATTTAGTGCAGATATTCCTATGTTTTCTTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR TCA 90 bp | ACATGTTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATGCAGCGTGGACACAAAGATaGTCTGCAGTACCCAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: TCFLIVLQGSSSPFYLHAAWTQR*SAVPNN Trigger: GTTATTGGGTACTGCAGATCATCTTTGTGTCCACGC...TGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CCA 90 bp | ATGACTGGTACCAACTTTTTGTCTCAGCCCAGAGCACTTTCTCAGGATTTAATTAACATAACAGTTGACTaGGTGGGGACAGGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTNFLSQPRALSQDLINITVD*VGTGTP Trigger: AGGAGTCCCTGTCCCCACCCAGTCAACTGTTATGTT...AATTAAATCCTGAGAAAGTGCTCTGGGCTGAGACAAAAAGTTGGTACCAGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| 3UTR CAA 72 bp | GGTAATCTGGCCAGGATCCAAGAGAGGATGGTGACTTaGGACATTCCTGTTAACAAAGATTTTAGAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GNLARIQERMVT*DIPVNKDFRGT Trigger: CGTTCCTCTAAAATCTTTGTTAACAGGAATGTCCAAAGTCACCATCCTCTCTTGGATCCTGGCCAGATTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| 3UTR CAA 72 bp | TTCCCCTCGTCTGCATCTCCCAGGATTAGTACAGTTTaGTCAGCCTGTATTGTAAGCTGTGTTCTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSASPRISTV*SACIVSCVLST Trigger: AGTTGAAAGAACACAGCTTACAATACAGGCTGACAAAACTGTACTAATCCTGGGAGATGCAGACGAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS CCA 90 bp | GGAGGAGTGAGGCTCTGGACGAGGCTGGTGGGAGGGCCAGGCAGCTaGTGCTTGTCCACACCCTGCCGTGACTTGCCAAAGCGCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GGVRLWTRLVGGPGS*CLSTPCRDLPKRCR Trigger: CCGACAGCGCTTTGGCAAGTCACGGCAGGGTGTGGACAAGCACCAGCTGCCTGGCCCTCCCACCAGCCTCGTCCAGAGCCTCACTCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 90 bp | GCCCTGAGGAAGGCGGTGGCCCGCAGAGGCTCCACTGGCGTACTCTaGCTTCTGGCTATAGTGCATGTGGATGAAGCCTTCCCCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ALRKAVARRGSTGVL*LLAIVHVDEAFPWN Trigger: ATTCCAGGGGAAGGCTTCATCCACATGCACTATAGCCAGAAGCCAGAGTACGCCAGTGGAGCCTCTGCGGGCCACCGCCTTCCTCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS TCA 90 bp | GCAGGGTATCCAGGAAGATCCCATAGAGGAGGTACTGGCCTACGATaGAGGCCACCTCCATGGTGGTGCGGATCAGAATGGTGCAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: AGYPGRSHRGGTGLR*RPPPWWCGSEWCRH Trigger: ATGTCTGCACCATTCTGATCCGCACCACCATGGAGGTGGCCTTCATCGTAGGCCAGTACCTCCTCTATGGGATCTTCCTGGATACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS GCA 90 bp | CCAGTGCGGTGGGCCTCTTTAGCTTTCTCAGCATCCCGCAATTTCTaGTTTTCCTGCATGCGCACAGTGTGCATGGCATGGCCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PVRWASLAFSASRNF*FSCMRTVCMAWPMY Trigger: GTACATGGGCCATGCCATGCACACTGTGCGCATGCAGGAAAAGCAGAAATTGCGGGATGCTGAGAAAGCTAAAGAGGCCCACCGCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 90 bp | CCCATCTACTTCTTTCCAGCAGGACAGCTCGGCCTTTTCGGCTACTaGGTACTCATAGGCACCAGTGCGGTGGGCCTCTTTAGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PIYFFPAGQLGLFGY*VLIGTSAVGLFSFL Trigger: GAGAAAGCTAAAGAGGCCCACCGCACTGGTGCCTATGAGTACCCAGTAGCCGAAAAGGCCGAGCTGTCCTGCTGGAAAGAAGTAGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS TCA 90 bp | CTGAAGTCGCTGAAGAATTTCTCTCCGGAGCTGTTCTTTAGGCACTaGTTGAAGTCAGGGGGAGGAGTGAGGCTCTGGACGAGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKSLKNFSPELFFRH*LKSGGGVRLWTRLV Trigger: CACCAGCCTCGTCCAGAGCCTCACTCCTCCCCCTGACTTCAATCAGTGCCTAAAGAACAGCTCCGGAGAGAAATTCTTCAGCGACTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTTCACATTTCTTCTGCTCAGAGTGGTTTGCTCCTGAGTAGGGGTCCAGCGATGACTGTGGAGTGCTaGTGGACCTCCTCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILHISSAQSGLLLSRGPAMTVEC*WTSSRN Trigger: GTTCCTGGAGGAGGTCCACAAGCACTCCACAGTCAT...CGCTGGACCCCTACTCAGGAGCAAACCACTCTGAGCAGAAGAAATGTGAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS GCA 90 bp | TGGGCCTCTTTAGCTTTCTCAGCATCCCGCAATTTCTGCTTTTCCTaGATGCGCACAGTGTGCATGGCATGGCCCATGTACACTAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WASLAFSASRNFCFS*MRTVCMAWPMYTRE Trigger: TTCTCTAGTGTACATGGGCCATGCCATGCACACTGTGCGCATGCAGGAAAAGCAGAAATTGCGGGATGCTGAGAAAGCTAAAGAGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS GCA 90 bp | GATGGAAGGAGACTCCAGGCTGATAACAGTAAATCCCCCAGACCTTaGTTTGCTGCTGGCCTTACTAAGGCGCCGTTTGTCACTATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DGRRLQADNSKSPRP*FAAGLTKAPFVTMV Trigger: TACCATAGTGACAAACGGCGCCTTAGTAAGGCCAGCAGCAAAGCAAGGTCTGGGGGATTTACTGTTATCAGCCTGGAGTCTCCTTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGTATACCATCACGAGAGAGACTGTTTCTTTCCTGCCTCACACTCCTTAGAATGACTGTGGAGTGCTaGTGGACCTCCTCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESIPSRERLFLSCLTLLRMTVEC*WTSSRN Trigger: GTTCCTGGAGGAGGTCCACAAGCACTCCACAGTCAT...TCTAAGGAGTGTGAGGCAGGAAAGAAACAGTCTCTCTCGTGATGGTATACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CAA 90 bp | ACAGAGATGGATGGGCATGCACACACAAACACACACACACACACACACACACACTCATCTGACCTTGCTTaGCTGCTGGCCTTACTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEMDGHAHTNTHTHTHTHSSDLA*LLALLR Trigger: CCTTAGTAAGGCCAGCAGCAAAGCAAGGTCAGATGA...GTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCATGCCCATCCATCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGCTTTAAACTGTGACCCCAGAGGAGGTCAAACTGTGAACACACTTGCTCCCCCAGACCTTGCTTaGCTGCTGGCCTTACTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKALNCDPRGGQTVNTLAPPDLA*LLALLR Trigger: CCTTAGTAAGGCCAGCAGCAAAGCAAGGTCTGGGGG...AGCAAGTGTGTTCACAGTTTGACCTCCTCTGGGGTCACAGTTTAAAGCTTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS-3UTR CAA 90 bp | ACATGTTTCCTTATCGTTCTTCAGGGCTCTTCTTCACCATTCTATCTGCATGCAACAGGTCATCTGACCTaGCTTTGCTGCTGGCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: TCFLIVLQGSSSPFYLHATGHLT*LCCWPY Trigger: GTAAGGCCAGCAGCAAAGCAAGGTCAGATGACCTGT...TGCATGCAGATAGAATGGTGAAGAAGAGCCCTGAAGAACGATAAGGAAACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072600.7 |
||
| CDS CCA 72 bp | AGGCTCTGGACGAGGCTGGTGGGAGGGCCAGGCAGCTaGTGCTTGTCCACACCCTGCCGTGACTTGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLWTRLVGGPGS*CLSTPCRDLPK Trigger: CTTTGGCAAGTCACGGCAGGGTGTGGACAAGCACCAGCTGCCTGGCCCTCCCACCAGCCTCGTCCAGAGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | AGCCCTGAGGAAGGCGGTGGCCCGCAGAGGCTCCACTaGCGTACTCTGGCTTCTGGCTATAGTGCATGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPEEGGGPQRLH*RTLASGYSACG Trigger: TCCACATGCACTATAGCCAGAAGCCAGAGTACGCCAGTGGAGCCTCTGCGGGCCACCGCCTTCCTCAGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CAA 72 bp | CCAGGCAGCTGGTGCTTGTCCACACCCTGCCGTGACTaGCCAAAGCGCTGTCGGATCTTCTTCCAGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSWCLSTPCRD*PKRCRIFFQPR Trigger: CCTGGGCTGGAAGAAGATCCGACAGCGCTTTGGCAAGTCACGGCAGGGTGTGGACAAGCACCAGCTGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS GCA 72 bp | CAGGCAGCTGGTGCTTGTCCACACCCTGCCGTGACTTaGCAAAGCGCTGTCGGATCTTCTTCCAGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QAAGACPHPAVT*QSAVGSSSSPG Trigger: ACCTGGGCTGGAAGAAGATCCGACAGCGCTTTGGCAAGTCACGGCAGGGTGTGGACAAGCACCAGCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | CCCCTGGAATCTGCTCCTGGTTTGGCACTTCCCCAGTaGCCAGAGCGTCTGGATTCTTCCGGGAGCCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: PLESAPGLALPQ*PERLDSSGSPC Trigger: ACATGGGCTCCCGGAAGAATCCAGACGCTCTGGCCACTGGGGAAGTGCCAAACCAGGAGCAGATTCCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | TGCATGTGGATGAAGCCTTCCCCTGGAATCTGCTCCTaGTTTGGCACTTCCCCAGTGGCCAGAGCGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CMWMKPSPGICS*FGTSPVARASG Trigger: TCCAGACGCTCTGGCCACTGGGGAAGTGCCAAACCAGGAGCAGATTCCAGGGGAAGGCTTCATCCACATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS TCA 72 bp | CCAGGAAGATCCCATAGAGGAGGTACTGGCCTACGATaGAGGCCACCTCCATGGTGGTGCGGATCAGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: PGRSHRGGTGLR*RPPPWWCGSEW Trigger: CCATTCTGATCCGCACCACCATGGAGGTGGCCTTCATCGTAGGCCAGTACCTCCTCTATGGGATCTTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | TTCTTTCCAGCAGGACAGCTCGGCCTTTTCGGCTACTaGGTACTCATAGGCACCAGTGCGGTGGGCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FFPAGQLGLFGY*VLIGTSAVGLF Trigger: AAAGAGGCCCACCGCACTGGTGCCTATGAGTACCCAGTAGCCGAAAAGGCCGAGCTGTCCTGCTGGAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | GTGGATGAAGCCTTCCCCTGGAATCTGCTCCTGGTTTaGCACTTCCCCAGTGGCCAGAGCGTCTGGATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VDEAFPWNLLLV*HFPSGQSVWIL Trigger: AAGAATCCAGACGCTCTGGCCACTGGGGAAGTGCCAAACCAGGAGCAGATTCCAGGGGAAGGCTTCATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | CTCCTGGTTTGGCACTTCCCCAGTGGCCAGAGCGTCTaGATTCTTCCGGGAGCCCATGTTATTACTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLVWHFPSGQSV*ILPGAHVITEV Trigger: GACTTCAGTAATAACATGGGCTCCCGGAAGAATCCAGACGCTCTGGCCACTGGGGAAGTGCCAAACCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | CTTCTGGCTATAGTGCATGTGGATGAAGCCTTCCCCTaGAATCTGCTCCTGGTTTGGCACTTCCCCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLAIVHVDEAFP*NLLLVWHFPSG Trigger: GCCACTGGGGAAGTGCCAAACCAGGAGCAGATTCCAGGGGAAGGCTTCATCCACATGCACTATAGCCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS TCA 72 bp | TGGCGTACTCTGGCTTCTGGCTATAGTGCATGTGGATaGAGCCTTCCCCTGGAATCTGCTCCTGGTTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WRTLASGYSACG*SLPLESAPGLA Trigger: TGCCAAACCAGGAGCAGATTCCAGGGGAAGGCTTCATCCACATGCACTATAGCCAGAAGCCAGAGTACGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS GCA 72 bp | TCCCGCAATTTCTGCTTTTCCTGCATGCGCACAGTGTaGATGGCATGGCCCATGTACACTAGAGAAGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRNFCFSCMRTV*MAWPMYTREGV Trigger: CACGCCTTCTCTAGTGTACATGGGCCATGCCATGCACACTGTGCGCATGCAGGAAAAGCAGAAATTGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS TCA 72 bp | CTGAAGAATTTCTCTCCGGAGCTGTTCTTTAGGCACTaGTTGAAGTCAGGGGGAGGAGTGAGGCTCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LKNFSPELFFRH*LKSGGGVRLWT Trigger: CGTCCAGAGCCTCACTCCTCCCCCTGACTTCAATCAGTGCCTAAAGAACAGCTCCGGAGAGAAATTCTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS GCA 72 bp | TGGGCCTCTTTAGCTTTCTCAGCATCCCGCAATTTCTaGTTTTCCTGCATGCGCACAGTGTGCATGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: WASLAFSASRNF*FSCMRTVCMAW Trigger: CCATGCCATGCACACTGTGCGCATGCAGGAAAAGCAGAAATTGCGGGATGCTGAGAAAGCTAAAGAGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS GCA 72 bp | AGACTCCAGGCTGATAACAGTAAATCCCCCAGACCTTaGTTTGCTGCTGGCCTTACTAAGGCGCCGTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLQADNSKSPRP*FAAGLTKAPFV Trigger: GACAAACGGCGCCTTAGTAAGGCCAGCAGCAAAGCAAGGTCTGGGGGATTTACTGTTATCAGCCTGGAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | TTCTGCTTTTCCTGCATGCGCACAGTGTGCATGGCATaGCCCATGTACACTAGAGAAGGCGTGGACACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FCFSCMRTVCMA*PMYTREGVDTK Trigger: CTTTGTGTCCACGCCTTCTCTAGTGTACATGGGCCATGCCATGCACACTGTGCGCATGCAGGAAAAGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CCA 72 bp | GCAATTTCTGCTTTTCCTGCATGCGCACAGTGTGCATaGCATGGCCCATGTACACTAGAGAAGGCGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: AISAFPACAQCA*HGPCTLEKAWT Trigger: TGTCCACGCCTTCTCTAGTGTACATGGGCCATGCCATGCACACTGTGCGCATGCAGGAAAAGCAGAAATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072600.7 ENSMUST00000199597.2 |
||
| CDS CAA 72 bp | TCCAGGCTGATAACAGTAAATCCCCCAGACCTTGCTTaGCTGCTGGCCTTACTAAGGCGCCGTTTGTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: SRLITVNPPDLA*LLALLRRRLSL Trigger: TAGTGACAAACGGCGCCTTAGTAAGGCCAGCAGCAAAGCAAGGTCTGGGGGATTTACTGTTATCAGCCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199597.2 |
||