Pregenerated sensors for GJA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050234Ensembl transcript IDs: ENSMUST00000053753.8
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCGAATGTCCACCTCCCTGGCCCAGTTGTCTCTGAGGTGCCTTTaGGGAGTGGACCGCCAGAGAGGCAGCCAAGGTACACGTGCGTGC | + |
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Preference number: 1 (lower is better) Translates to: QRMSTSLAQLSLRCL*GVDRQRGSQGTRAC Trigger: GCACGCACGTGTACCTTGGCTGCCTCTCTGGCGGTCCACTCCTCAAAGGCACCTCAGAGACAACTGGGCCAGGGAGGTGGACATTCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR GCA 90 bp | CACAAAGGCTCCAGGTATTCCAGAACCATCTGTGACCAGGTCCTCTaGCCAGCGAATGTCCACCTCCCTGGCCCAGTTGTCTCTGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: HKGSRYSRTICDQVL*PANVHLPGPVVSEV Trigger: CACCTCAGAGACAACTGGGCCAGGGAGGTGGACATTCGCTGGGCAGAGGACCTGGTCACAGATGGTTCTGGAATACCTGGAGCCTTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR TCA 90 bp | GGGAGGCTCGAAAGTCAACTTGGCGCTGGGTCCCTCAGCAACAGGTaGAAAGGATCGAGGGTTCACAGAACACTTAGTCAAGAGCACTCC | + |
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Preference number: 1 (lower is better) Translates to: GRLESQLGAGSLSNR*KGSRVHRTLSQEHS Trigger: GGAGTGCTCTTGACTAAGTGTTCTGTGAACCCTCGATCCTTTTCACCTGTTGCTGAGGGACCCAGCGCCAAGTTGACTTTCGAGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR CCA 90 bp | CAGGGTTCAGTGACTCGTCTAATAGGGGAGGCTCGAAAGTCAACTTaGCGCTGGGTCCCTCAGCAACAGGTGAAAAGGATCGAGGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: QGSVTRLIGEARKST*RWVPQQQVKRIEGS Trigger: TGAACCCTCGATCCTTTTCACCTGTTGCTGAGGGACCCAGCGCCAAGTTGACTTTCGAGCCTCCCCTATTAGACGAGTCACTGAACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR CCA 90 bp | GAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGAAGTaGGGTGTGATGAAAACCCAGGGTTCAGTGACTCGTCTAATAGGG | + |
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Preference number: 1 (lower is better) Translates to: EAEPAACISAFSQEK*GVMKTQGSVTRLIG Trigger: CCCTATTAGACGAGTCACTGAACCCTGGGTTTTCATCACACCCCACTTCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACCATCTGTGACCAGGTCCTCTGCCCAGCGAATGTCCACCTCCCTGGCCCATCTCTGAGGTGCCTTTaGGGAGTGGACCGCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RTICDQVLCPANVHLPGPSLRCL*GVDRQR Trigger: TCTCTGGCGGTCCACTCCTCAAAGGCACCTCAGAGA...TGGGCCAGGGAGGTGGACATTCGCTGGGCAGAGGACCTGGTCACAGATGGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGATTCCAGAACCATCTGTaGCCAGGTCCTCTGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VQVTRLSQQPASVLFPRRFQNHL*PGPLPS Trigger: GCTGGGCAGAGGACCTGGTCACAGATGGTTCTGGAA...TCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCTGTGACCCAGTCTGGGTAGTGTCACATTCTGGTAAGCAGCCAGTGTCCTGGCCCAGTTGTCTCTaGGGTGCCTTTGAGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TCCDPVWVVSHSGKQPVSWPSCL*GAFEEW Trigger: CCACTCCTCAAAGGCACCTCAGAGACAACTGGGCCA...GGACACTGGCTGCTTACCAGAATGTGACACTACCCAGACTGGGTCACAGCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTCTGGTAAGCAGCCAGTGTCCTCTGGTCATCACAAAGGCTCCAGGTATTTCGGGGCAGCTCTGTTaGGTGACATTAGCCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: HILVSSQCPLVITKAPGISGQLC*VTLAPD Trigger: ATCTGGGGCTAATGTCACTCAACAGAGCTGCCCCGA...AATACCTGGAGCCTTTGTGATGACCAGAGGACACTGGCTGCTTACCAGAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGCACTCCCACCTGCTGTaGCCCAGTCTGGGTAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: NSGTRSEKNKTSTSSPGKHSHLL*PSLGSV Trigger: GACACTACCCAGACTGGGTCACAGCAGGTGGGAGTG...CTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGGCAGCCAGTGTCCTCTaGTCATCACAAAGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: NSGTRSEKNKTSTSSPGKAASVL*SSQRLQ Trigger: CTGGAGCCTTTGTGATGACCAGAGGACACTGGCTGC...CTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR GCA 72 bp | AGGAGTGGACCGCCAGAGAGGCAGCCAAGGTACACGTaGGTGCTCCTCGGGGCAGCTCTGTTGAGTGACATT | + |
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Preference number: 3 (lower is better) Translates to: RSGPPERQPRYT*VLLGAALLSDI Trigger: AATGTCACTCAACAGAGCTGCCCCGAGGAGCACGCACGTGTACCTTGGCTGCCTCTCTGGCGGTCCACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTGTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCGTCTCTGAGGTGCCTTaGAGGAGTGGACCGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: VSVQVTRLSQQPASVLFPVSEVP*RSGPPE Trigger: CTCTGGCGGTCCACTCCTCAAAGGCACCTCAGAGAC...GGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGACAGACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR GCA 72 bp | TGTGTCTGTCCAGGTGACGAGGCTGAGCCAGCAGCCTaGATCAGTGCTTTTTCCCAGGAGAAGTGGGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CVCPGDEAEPAA*ISAFSQEKWGV Trigger: CACACCCCACTTCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGACAGACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR CCA 72 bp | GTGACTCGTCTAATAGGGGAGGCTCGAAAGTCAACTTaGCGCTGGGTCCCTCAGCAACAGGTGAAAAGGATC | + |
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Preference number: 3 (lower is better) Translates to: VTRLIGEARKST*RWVPQQQVKRI Trigger: GATCCTTTTCACCTGTTGCTGAGGGACCCAGCGCCAAGTTGACTTTCGAGCCTCCCCTATTAGACGAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR CCA 72 bp | CCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGAAGTaGGGTGTGATGAAAACCCAGGGTTCAGTGACTCGT | + |
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Preference number: 3 (lower is better) Translates to: PAACISAFSQEK*GVMKTQGSVTR Trigger: ACGAGTCACTGAACCCTGGGTTTTCATCACACCCCACTTCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| 3UTR TCA 72 bp | GAAAGTCAACTTGGCGCTGGGTCCCTCAGCAACAGGTaGAAAGGATCGAGGGTTCACAGAACACTTAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: ESQLGAGSLSNR*KGSRVHRTLSQ Trigger: TTGACTAAGTGTTCTGTGAACCCTCGATCCTTTTCACCTGTTGCTGAGGGACCCAGCGCCAAGTTGACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR GCA 90 bp | ACCTGCTGTGACCCAGTCTGGGTAGTGTCACATTCTGGTAAGCAGCCAGTGTCCAAGGGTCTGAGGCACTaGCCTGGGCCGGGCGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: TCCDPVWVVSHSGKQPVSKGLRH*PGPGGR Trigger: ACGCCCGCCCGGCCCAGGGCAGTGCCTCAGACCCTT...GGACACTGGCTGCTTACCAGAATGTGACACTACCCAGACTGGGTCACAGCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR TCA 90 bp | GTGTCTGTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCTCAGGGTGGGTGTGCTaGCGAAGAGGAACTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VSVQVTRLSQQPASVLFPSGWVC*RRGTAA Trigger: TGCTGCAGTTCCTCTTCGTCAGCACACCCACCCTGA...GGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGACAGACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR TCA 90 bp | GTGTCTGTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCGCCGAGACAGGTAGATaGCGTGGCCCAGGTAGATCA | + |
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Preference number: 4 (lower is better) Translates to: VSVQVTRLSQQPASVLFPAETGR*RGPGRS Trigger: TGATCTACCTGGGCCACGTCATCTACCTGTCTCGGC...GGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGACAGACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | AGAACCATCTGTGACCAGGTCCTCTGCCCAGCGAATGTCCACCTCCCTGGCCCACCCAGTTCTGCTCAGTaGATGAGAGCCCGTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RTICDQVLCPANVHLPGPPSSAQ*MRARCR Trigger: CCTACAACGGGCTCTCATCCACTGAGCAGAACTGGG...TGGGCCAGGGAGGTGGACATTCGCTGGGCAGAGGACCTGGTCACAGATGGTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | GTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGAAGGGTCCCTCGCCCATaGGGAGGTAGAAGAAAACCT | + |
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Preference number: 4 (lower is better) Translates to: VQVTRLSQQPASVLFPRRRVPRP*GGRRKP Trigger: AGGTTTTCTTCTACCTCCCCATGGGCGAGGGACCCT...TCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR GCA 90 bp | GTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGAGCCATAGAGGAAGCCTaGCTCCAGCACACTCTTACA | + |
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Preference number: 4 (lower is better) Translates to: VQVTRLSQQPASVLFPRRAIEEA*LQHTLT Trigger: TGTAAGAGTGTGCTGGAGGCAGGCTTCCTCTATGGC...TCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | GTGTCTGTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCTTGGTGCAGCCCGGCTaGGCTGTGTTACACTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: VSVQVTRLSQQPASVLFPLVQPG*AVLHSK Trigger: TTTTGAGTGTAACACAGCCCAGCCGGGCTGCACCAA...GGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGACAGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | GTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGACTGCCACCGAGATCTTaGCCATCTGATGTTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: VQVTRLSQQPASVLFPRRLPPRS*PSDVRW Trigger: CCATCGAACATCAGATGGCCAAGATCTCGGTGGCAG...TCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | GTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGAACACATACTGCTTCTTaGATGCAGAGCTGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VQVTRLSQQPASVLFPRRTHTAS*MQSCWG Trigger: GCCCCAACAGCTCTGCATCCAAGAAGCAGTATGTGT...TCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR TCA 90 bp | ACCTGCTGTGACCCAGTCTGGGTAGTGTCACATTCTGGTAAGCAGCCAGTGTCCGAGATCTTGGCCATCTaGTGTTCGATGGCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TCCDPVWVVSHSGKQPVSEILAI*CSMAAS Trigger: ACTGGCTGCCATCGAACATCAGATGGCCAAGATCTC...GGACACTGGCTGCTTACCAGAATGTGACACTACCCAGACTGGGTCACAGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | AACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGGGGCAGGGCGCACGCTaGCACACAAACACCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSGTRSEKNKTSTSSPGKGQGAR*HTNTGS Trigger: GGAGCCGGTGTTTGTGTGCCAGCGTGCGCCCTGCCC...CTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | ACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGGGTAGGTGGGACACGGTaGGGAAGAGGGTCCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: TVELEVRKTRHQPVPLARVGGTR*GRGSLA Trigger: GGCGAGGGACCCTCTTCCCCACCGTGTCCCACCTAC...CCTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | GTCCAGGTGACGAGGCTGAGCCAGCAGCCTGCATCAGTGCTTTTTCCCAGGAGAAGCTGTGTTTACAAATaGGGGAGGTCTGGAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: VQVTRLSQQPASVLFPRRSCVYK*GRSGRG Trigger: ACCTCTTCCAGACCTCCCCCATTTGTAAACACAGCT...TCTCCTGGGAAAAAGCACTGATGCAGGCTGCTGGCTCAGCCTCGTCACCTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR TCA 90 bp | AACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGTTCAGGGTAAGGGTCTaGGGCACTGCCCTGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: NSGTRSEKNKTSTSSPGKFRVRV*GTALGR Trigger: CCGGCCCAGGGCAGTGCCTCAGACCCTTACCCTGAA...CTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR TCA 90 bp | GTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGGGCCGTTCTGCTCAGTGGATaGGAGCCCGTTGTAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VELEVRKTRHQPVPLARAVLLSG*EPVVGG Trigger: CCCACCTACAACGGGCTCTCATCCACTGAGCAGAAC...GGCCCTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR GCA 90 bp | GTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGGGCCAAGACGACCGTCCTCTaGCACCGAGATCTTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VELEVRKTRHQPVPLARAKTTVL*HRDLGH Trigger: ATGGCCAAGATCTCGGTGGCAGAGGACGGTCGTCTT...GGCCCTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | ACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGGAGAGCCCGTTGTAGGTaGGACACGGTGGGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TVELEVRKTRHQPVPLARRARCR*DTVGKR Trigger: CCTCTTCCCCACCGTGTCCCACCTACAACGGGCTCT...CCTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR GCA 90 bp | CACATTCTGGTAAGCAGCCAGTGTCCTCTGGTCATCACAAAGGCTCCAGGTATTCCGTTAACCAGATCTTaGCCACCACGGTCGAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: HILVSSQCPLVITKAPGIPLTRS*PPRSSV Trigger: AACACTCGACCGTGGTGGGCAAGATCTGGTTAACGG...AATACCTGGAGCCTTTGTGATGACCAGAGGACACTGGCTGCTTACCAGAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | CACATTCTGGTAAGCAGCCAGTGTCCTCTGGTCATCACAAAGGCTCCAGGTATTGAGTGTTCCTGGACCTaGTCTAGCAACTTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HILVSSQCPLVITKAPGIECSWT*SSNFSR Trigger: CCTGGAGAAGTTGCTAGACCAGGTCCAGGAACACTC...AATACCTGGAGCCTTTGTGATGACCAGAGGACACTGGCTGCTTACCAGAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR GCA 90 bp | ACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGGAAGTTGGCCCAGTTCTaGTCAGTGGATGAGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TVELEVRKTRHQPVPLARKLAQF*SVDESP Trigger: CGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTT...CCTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | AACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCCCCTGGCAAGACGGTCGAGTGTTCCTaGACCTGGTCTAGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: NSGTRSEKNKTSTSSPGKTVECS*TWSSNF Trigger: GAAGTTGCTAGACCAGGTCCAGGAACACTCGACCGT...CTTGCCAGGGGAACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR GCA 90 bp | TTGAGGATCATAAACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTCATAGCAGACGTTGGTaGAGCCCGGCTGGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LRIINSGTRSEKNKTSTSHSRRW*SPAGLC Trigger: ACACAGCCCAGCCGGGCTGCACCAACGTCTGCTATG...ACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGTTTATGATCCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CCA 90 bp | TTGAGGATCATAAACAGTGGAACTAGAAGTGAGAAAAACAAGACATCAACCAGTTCAGTCTCTCCTCTGTaGTCAAGTTGGCCCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRIINSGTRSEKNKTSTSSVSPL*SSWPSS Trigger: AGAACTGGGCCAACTTGACCACAGAGGAGAGACTGA...ACTGGTTGATGTCTTGTTTTTCTCACTTCTAGTTCCACTGTTTATGATCCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 90 bp | CGATGTGGGGGCAGGGCGCACGCTGGCACACAAACACCGGCTCCATaGTCCAGCCATAGAGGCGCCACTGGCCATAGAGGAAGCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: RCGGRAHAGTQTPAP*SSHRGATGHRGSLP Trigger: AGGCAGGCTTCCTCTATGGCCAGTGGCGCCTCTATGGCTGGACCATGGAGCCGGTGTTTGTGTGCCAGCGTGCGCCCTGCCCCCACATCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS GCA 90 bp | TGGGGAGGTAGAAGAAAACCTGTTCAGGGTAAGGGTCTGAGGCACTaGCCTGGGCCGGGCGGGCGTCGTGGTCCCTTCGTGCCTTTATCT | + |
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Preference number: 5 (lower is better) Translates to: WGGRRKPVQGKGLRH*PGPGGRRGPFVPLS Trigger: AGATAAAGGCACGAAGGGACCACGACGCCCGCCCGGCCCAGGGCAGTGCCTCAGACCCTTACCCTGAACAGGTTTTCTTCTACCTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 90 bp | GCCCGTTGTAGGTGGGACACGGTGGGGAAGAGGGTCCCTCGCCCATaGGGAGGTAGAAGAAAACCTGTTCAGGGTAAGGGTCTGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: ARCRWDTVGKRVPRP*GGRRKPVQGKGLRH Trigger: GTGCCTCAGACCCTTACCCTGAACAGGTTTTCTTCTACCTCCCCATGGGCGAGGGACCCTCTTCCCCACCGTGTCCCACCTACAACGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 90 bp | TCAAGTTGGCCCAGTTCTGCTCAGTGGATGAGAGCCCGTTGTAGGTaGGACACGGTGGGGAAGAGGGTCCCTCGCCCATGGGGAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SSWPSSAQWMRARCR*DTVGKRVPRPWGGR Trigger: TCTACCTCCCCATGGGCGAGGGACCCTCTTCCCCACCGTGTCCCACCTACAACGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS TCA 90 bp | CAGTCTCTCCTCTGTGGTCAAGTTGGCCCAGTTCTGCTCAGTGGATaGGAGCCCGTTGTAGGTGGGACACGGTGGGGAAGAGGGTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: QSLLCGQVGPVLLSG*EPVVGGTRWGRGSL Trigger: GAGGGACCCTCTTCCCCACCGTGTCCCACCTACAACGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTTGACCACAGAGGAGAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 90 bp | GCGCCCCACGAATCCGAAGACGACCGTCCTCTGCCACCGAGATCTTaGCCATCTGATGTTCGATGGCAGCCAGTGCCCGCTCTACATGTA | + |
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Preference number: 5 (lower is better) Translates to: APHESEDDRPLPPRS*PSDVRWQPVPALHV Trigger: TACATGTAGAGCGGGCACTGGCTGCCATCGAACATCAGATGGCCAAGATCTCGGTGGCAGAGGACGGTCGTCTTCGGATTCGTGGGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS TCA 90 bp | TCCCTTCGTGCCTTTATCTCCCGGCTGACACACCGACACAGCAGGTaGACCAGCTCCAGCAGGTTGAGCACCAGGGAGATGACTCCTACC | + |
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Preference number: 5 (lower is better) Translates to: SLRAFISRLTHRHSR*TSSSRLSTREMTPT Trigger: GGTAGGAGTCATCTCCCTGGTGCTCAACCTGCTGGAGCTGGTTCACCTGCTGTGTCGGTGTGTCAGCCGGGAGATAAAGGCACGAAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS GCA 90 bp | ATAGGTACCCATGAGCGCCCCACGAATCCGAAGACGACCGTCCTCTaGCACCGAGATCTTGGCCATCTGATGTTCGATGGCAGCCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: IGTHERPTNPKTTVL*HRDLGHLMFDGSQC Trigger: GCACTGGCTGCCATCGAACATCAGATGGCCAAGATCTCGGTGGCAGAGGACGGTCGTCTTCGGATTCGTGGGGCGCTCATGGGTACCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 90 bp | AGGTCAGTCTCTCCTCTGTGGTCAAGTTGGCCCAGTTCTGCTCAGTaGATGAGAGCCCGTTGTAGGTGGGACACGGTGGGGAAGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RSVSPLWSSWPSSAQ*MRARCRWDTVGKRV Trigger: GACCCTCTTCCCCACCGTGTCCCACCTACAACGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTTGACCACAGAGGAGAGACTGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS TCA 90 bp | CGAATCCGAAGACGACCGTCCTCTGCCACCGAGATCTTGGCCATCTaGTGTTCGATGGCAGCCAGTGCCCGCTCTACATGTAGGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RIRRRPSSATEILAI*CSMAASARSTCRSL Trigger: CAAGGACCTACATGTAGAGCGGGCACTGGCTGCCATCGAACATCAGATGGCCAAGATCTCGGTGGCAGAGGACGGTCGTCTTCGGATTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGTGACCCAGTCTGGGTAGTGTCACATTCTGGTAAGCAGCCAGTGTCCTTGGATGCAGAGCTGTaGGGGCGGCTAGGGGACTTT | + |
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Preference number: 5 (lower is better) Translates to: TCCDPVWVVSHSGKQPVSLDAEL*GRLGDF Trigger: AAAGTCCCCTAGCCGCCCCAACAGCTCTGCATCCAA...GGACACTGGCTGCTTACCAGAATGTGACACTACCCAGACTGGGTCACAGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CAA 90 bp | AGAACCATCTGTGACCAGGTCCTCTGCCCAGCGAATGTCCACCTCCCTGGCCCATACACATACTGCTTCTaGGATGCAGAGCTGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RTICDQVLCPANVHLPGPYTYCF*DAELLG Trigger: CCCCAACAGCTCTGCATCCAAGAAGCAGTATGTGTA...TGGGCCAGGGAGGTGGACATTCGCTGGGCAGAGGACCTGGTCACAGATGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 90 bp | ACTTTCGGCCACCCTGGGGAGCTGTGTTTACAAATGGGGGAGGTCTaGAAGAGGTCAGTCTCTCCTCTGTGGTCAAGTTGGCCCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TFGHPGELCLQMGEV*KRSVSPLWSSWPSS Trigger: AGAACTGGGCCAACTTGACCACAGAGGAGAGACTGACCTCTTCCAGACCTCCCCCATTTGTAAACACAGCTCCCCAGGGTGGCCGAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGTGACCCAGTCTGGGTAGTGTCACATTCTGGTAAGCAGCCAGTGTCCTCCTCTGTGGTCAAGTaGGCCCAGTTCTGCTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: TCCDPVWVVSHSGKQPVSSSVVK*AQFCSV Trigger: CACTGAGCAGAACTGGGCCAACTTGACCACAGAGGA...GGACACTGGCTGCTTACCAGAATGTGACACTACCCAGACTGGGTCACAGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 90 bp | TGTTTACAAATGGGGGAGGTCTGGAAGAGGTCAGTCTCTCCTCTGTaGTCAAGTTGGCCCAGTTCTGCTCAGTGGATGAGAGCCCGTTGT | + |
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Preference number: 5 (lower is better) Translates to: CLQMGEVWKRSVSPL*SSWPSSAQWMRARC Trigger: ACAACGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTTGACCACAGAGGAGAGACTGACCTCTTCCAGACCTCCCCCATTTGTAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | GGGTCTGAGGCACTGCCCTGGGCCGGGCGGGCGTCGTaGTCCCTTCGTGCCTTTATCTCCCGGCTGACACAC | + |
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Preference number: 6 (lower is better) Translates to: GSEALPWAGRAS*SLRAFISRLTH Trigger: GTGTGTCAGCCGGGAGATAAAGGCACGAAGGGACCACGACGCCCGCCCGGCCCAGGGCAGTGCCTCAGACCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS GCA 72 bp | ACTGCCCTGGGCCGGGCGGGCGTCGTGGTCCCTTCGTaGCTTTATCTCCCGGCTGACACACCGACACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TALGRAGVVVPS*LYLPADTPTQQ Trigger: CTGCTGTGTCGGTGTGTCAGCCGGGAGATAAAGGCACGAAGGGACCACGACGCCCGCCCGGCCCAGGGCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS GCA 72 bp | CAGCCCGGCTGGGCTGTGTTACACTCAAAATCAGACTaGTCGTCGCCCCACACCGACTCGCCAGCCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: QPGWAVLHSKSD*SSPHTDSPASP Trigger: GGGGCTGGCTGGCGAGTCGGTGTGGGGCGACGAGCAGTCTGATTTTGAGTGTAACACAGCCCAGCCGGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | GGCAGGGCGCACGCTGGCACACAAACACCGGCTCCATaGTCCAGCCATAGAGGCGCCACTGGCCATAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GRAHAGTQTPAP*SSHRGATGHRG Trigger: TCCTCTATGGCCAGTGGCGCCTCTATGGCTGGACCATGGAGCCGGTGTTTGTGTGCCAGCGTGCGCCCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS GCA 72 bp | CATGAGCGCCCCACGAATCCGAAGACGACCGTCCTCTaGCACCGAGATCTTGGCCATCTGATGTTCGATGGC | + |
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Preference number: 6 (lower is better) Translates to: HERPTNPKTTVL*HRDLGHLMFDG Trigger: GCCATCGAACATCAGATGGCCAAGATCTCGGTGGCAGAGGACGGTCGTCTTCGGATTCGTGGGGCGCTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | GAATCCGAAGACGACCGTCCTCTGCCACCGAGATCTTaGCCATCTGATGTTCGATGGCAGCCAGTGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: ESEDDRPLPPRS*PSDVRWQPVPA Trigger: AGCGGGCACTGGCTGCCATCGAACATCAGATGGCCAAGATCTCGGTGGCAGAGGACGGTCGTCTTCGGATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | AGGTGGGACACGGTGGGGAAGAGGGTCCCTCGCCCATaGGGAGGTAGAAGAAAACCTGTTCAGGGTAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: RWDTVGKRVPRP*GGRRKPVQGKG Trigger: ACCCTTACCCTGAACAGGTTTTCTTCTACCTCCCCATGGGCGAGGGACCCTCTTCCCCACCGTGTCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | TCTCCTCTGTGGTCAAGTTGGCCCAGTTCTGCTCAGTaGATGAGAGCCCGTTGTAGGTGGGACACGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPLWSSWPSSAQ*MRARCRWDTVG Trigger: CCCCACCGTGTCCCACCTACAACGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTTGACCACAGAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS TCA 72 bp | AGACGACCGTCCTCTGCCACCGAGATCTTGGCCATCTaGTGTTCGATGGCAGCCAGTGCCCGCTCTACATGT | + |
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Preference number: 6 (lower is better) Translates to: RRPSSATEILAI*CSMAASARSTC Trigger: ACATGTAGAGCGGGCACTGGCTGCCATCGAACATCAGATGGCCAAGATCTCGGTGGCAGAGGACGGTCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS TCA 72 bp | CTCTGTGGTCAAGTTGGCCCAGTTCTGCTCAGTGGATaGGAGCCCGTTGTAGGTGGGACACGGTGGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LCGQVGPVLLSG*EPVVGGTRWGR Trigger: TCTTCCCCACCGTGTCCCACCTACAACGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTTGACCACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | GGACTTTCGGCCACCCTGGGGAGCTGTGTTTACAAATaGGGGAGGTCTGGAAGAGGTCAGTCTCTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GLSATLGSCVYK*GRSGRGQSLLC Trigger: ACAGAGGAGAGACTGACCTCTTCCAGACCTCCCCCATTTGTAAACACAGCTCCCCAGGGTGGCCGAAAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | ATGGGGGAGGTCTGGAAGAGGTCAGTCTCTCCTCTGTaGTCAAGTTGGCCCAGTTCTGCTCAGTGGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: MGEVWKRSVSPL*SSWPSSAQWMR Trigger: TCTCATCCACTGAGCAGAACTGGGCCAACTTGACCACAGAGGAGAGACTGACCTCTTCCAGACCTCCCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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| CDS CCA 72 bp | CACCCTGGGGAGCTGTGTTTACAAATGGGGGAGGTCTaGAAGAGGTCAGTCTCTCCTCTGTGGTCAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: HPGELCLQMGEV*KRSVSPLWSSW Trigger: CCAACTTGACCACAGAGGAGAGACTGACCTCTTCCAGACCTCCCCCATTTGTAAACACAGCTCCCCAGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053753.8 |
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