Pregenerated sensors for GJA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048582Ensembl transcript IDs: ENSMUST00000061614.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACAGCACTaGAGGACAACTGTTCTCTGTCGCTGTGTCCTGCAGCCTGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: ASTRNACGLVPWKQH*RTTVLCRCVLQPAV Trigger: AACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTTGTCCTCCAGTGCTGTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CCA 90 bp | TTCCAGGGTCTCTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTaGCCTTGTCCCATGGAAACAGCACTGGAGGACAACTGTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: FQGLCISTCLYQECL*PCPMETALEDNCSL Trigger: CAGAGAACAGTTGTCCTCCAGTGCTGTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAGAGACCCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CCA 90 bp | CTGGAGGACAACTGTTCTCTGTCGCTGTGTCCTGCAGCCTGCAGTTaGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGACA | + |
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Preference number: 1 (lower is better) Translates to: LEDNCSLSLCPAACS*MSWTSHAIPEAQAT Trigger: TGTCGCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTTGTCCTCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR GCA 90 bp | ACAGCACTGGAGGACAACTGTTCTCTGTCGCTGTGTCCTGCAGCCTaGAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TALEDNCSLSLCPAA*SWMSWTSHAIPEAQ Trigger: TTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTTGTCCTCCAGTGCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR GCA 90 bp | CATGGAAACAGCACTGGAGGACAACTGTTCTCTGTCGCTGTGTCCTaGAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: HGNSTGGQLFSVAVS*SLQLDVLDLTCNSR Trigger: TCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTTGTCCTCCAGTGCTGTTTCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CCA 90 bp | AACTGTTCTCTGTCGCTGTGTCCTGCAGCCTGCAGTTGGATGTCCTaGACCTCACATGCAATTCCAGAAGCTCAAGCGACACTAGATAGA | + |
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Preference number: 1 (lower is better) Translates to: NCSLSLCPAACSWMS*TSHAIPEAQATLDR Trigger: TCTATCTAGTGTCGCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CAA 90 bp | ACTGGAGGACAACTGTTCTCTGTCGCTGTGTCCTGCAGCCTGCAGTaGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGAC | + |
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Preference number: 2 (lower is better) Translates to: TGGQLFSVAVSCSLQ*DVLDLTCNSRSSSD Trigger: GTCGCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTTGTCCTCCAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCCCAACAACCTTGCTCTaGCCCCACCTCGATCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSPTTLL*PHLDLR Trigger: TCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGG...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACGTCCTGGACCTCACATaGAATTCCAGAAGCTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LHLHLPLPGMPVALSHGNVLDLT*NSRSSS Trigger: GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGAC...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR-3UTR GCA 90 bp | GCCACACCACCATCTTCCTCCTCTGTTGAAGGGCTTTCCAGGGTCTCTGCATCTGAGATAGAGCTTAAGTaGCTCTGTGACTCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ATPPSSSSVEGLSRVSASEIELK*LCDSLG Trigger: GCCCAGAGAGTCACAGAGGCACTTAAGCTCTATCTC...AGATGCAGAGACCCTGGAAAGCCCTTCAACAGAGGAGGAAGATGGTGGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTGTTGCTTCATCATGACAGAATAGTGGAGGAGGCCGAACAAGAGCAAGCAGCATTAAAACCAGACTaGTCCAGTTTGCTCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: HLLLHHDRIVEEAEQEQAALKPD*SSLLSV Trigger: AACACTGAGCAAACTGGATCAGTCTGGTTTTAATGC...TGCTTGCTCTTGTTCGGCCTCCTCCACTATTCTGTCATGATGAAGCAACAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR GCA 72 bp | AAGAGCAAGCACTGCTGGGAGCCAACAACCTTGCTCTaGCCCCACCTCGATCTCAGACACTGGGGTCACCCC | + |
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Preference number: 3 (lower is better) Translates to: KSKHCWEPTTLL*PHLDLRHWGHP Trigger: GGGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCCCAGCAGTGCTTGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CCA 72 bp | ACAACCTTGCTCTGCCCCCACCTCGATCTCAGACACTaGGGTCACCCCCACCCTGTCCCACAGCGACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: TTLLCPHLDLRH*GHPHPVPQRQE Trigger: TTCTTGTCGCTGTGGGACAGGGTGGGGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR GCA 72 bp | CGAACAAGAGCAAGCACTGCTGGGAGCCAACAACCTTaGTCTGCCCCCACCTCGATCTCAGACACTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: RTRASTAGSQQP*SAPTSISDTGV Trigger: GACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCCCAGCAGTGCTTGCTCTTGTTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CCA 72 bp | CTCTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTaGCCTTGTCCCATGGAAACAGCACTGGAGGACAAC | + |
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Preference number: 3 (lower is better) Translates to: LCISTCLYQECL*PCPMETALEDN Trigger: GTTGTCCTCCAGTGCTGTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CCA 72 bp | AGGAATGCCTGTGGCCTTGTCCCATGGAAACAGCACTaGAGGACAACTGTTCTCTGTCGCTGTGTCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: RNACGLVPWKQH*RTTVLCRCVLQ Trigger: CTGCAGGACACAGCGACAGAGAACAGTTGTCCTCCAGTGCTGTTTCCATGGGACAAGGCCACAGGCATTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR GCA 72 bp | GAGGACAACTGTTCTCTGTCGCTGTGTCCTGCAGCCTaGAGTTGGATGTCCTGGACCTCACATGCAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: EDNCSLSLCPAA*SWMSWTSHAIP Trigger: TGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTTGTCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CCA 72 bp | AACTGTTCTCTGTCGCTGTGTCCTGCAGCCTGCAGTTaGATGTCCTGGACCTCACATGCAATTCCAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: NCSLSLCPAACS*MSWTSHAIPEA Trigger: AGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCAGGACACAGCGACAGAGAACAGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR TCA 72 bp | CCACAGCGACAAGAACAGCAAGCATTAAAACCAGACTaGTCCAGTTTGCTCAGTGTTTCCCTCAGGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: PQRQEQQALKPD*SSLLSVSLRGI Trigger: GATTCCCCTGAGGGAAACACTGAGCAAACTGGATCAGTCTGGTTTTAATGCTTGCTGTTCTTGTCGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR GCA 72 bp | GAGATAGAGCTTAAGTGCCTCTGTGACTCTCTGGGCTaGTTGGAGAGCTTAGGAATGGAAACTGAATTGTCC | + |
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Preference number: 3 (lower is better) Translates to: EIELKCLCDSLG*LESLGMETELS Trigger: GGACAATTCAGTTTCCATTCCTAAGCTCTCCAAGCAGCCCAGAGAGTCACAGAGGCACTTAAGCTCTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGACACTGGGGTCACCCTGGGCGGGCCAGAGCTaGTGGCCGTGGGTAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GANNLALPPPRSQTLGSPWAGQS*WPWVGG Trigger: ACCCCCTACCCACGGCCACCAGCTCTGGCCCGCCCA...GGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGACACTGGGGTCACCCCTTGCTGGACCTTCCTaGGTCCAGGAGGACCAACGG | + |
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Preference number: 4 (lower is better) Translates to: GANNLALPPPRSQTLGSPLAGPS*VQEDQR Trigger: CCGTTGGTCCTCCTGGACCCAGGAAGGTCCAGCAAG...GGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGACACTGGGGTCACCCGGGTCCAAGGGCTTGTaGCTGGCTTCTGAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: GANNLALPPPRSQTLGSPGSKGL*LASEAS Trigger: AGATGCCTCAGAAGCCAGGCACAAGCCCTTGGACCC...GGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGACACTGGGGTCACCCGTCGCAGCGGTAAAGTaGCTGCAGCTGGAAGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: GANNLALPPPRSQTLGSPVAAVK*LQLEAV Trigger: TACGGCTTCCAGCTGCAGCCACTTTACCGCTGCGAC...GGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGCGGGCCAGAGCTGGTaGCCGTGGGTAGGGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSAGQSW*PWVGGP Trigger: TGGACCCCCTACCCACGGCCACCAGCTCTGGCCCGC...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | GGCCGAACAAGAGCAAGCACTGCTGGGAGCCAACAACCTTGCTCTGCCCCCACCGCATCTCCACTGTGGTaGCCAAAGCCTGTTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GRTRASTAGSQQPCSAPTASPLW*PKPVPP Trigger: AGGGGGAACAGGCTTTGGCCACCACAGTGGAGATGC...GGTGGGGGCAGAGCAAGGTTGTTGGCTCCCAGCAGTGCTTGCTCTTGTTCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGACACTGGGGTCACCCGATGGCCAAGTCACCTaGTCTGGCACGTCCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GANNLALPPPRSQTLGSPDGQVT*SGTSVA Trigger: AGCAACGGACGTGCCAGACCAGGTGACTTGGCCATC...GGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCACCCGATGGAGACGCTaGGCGGGCCAGAGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSTRWRR*AGQSWW Trigger: CCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGT...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CAA 72 bp | CCGAACAAGAGCAAGCACTGCTGGGAGCCAACAACCTaGCTCTGCCCCCACCTCGATCTCAGACACTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PNKSKHCWEPTT*LCPHLDLRHWG Trigger: ACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCCCAGCAGTGCTTGCTCTTGTTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGACACTGGGGTCACCCGACACGAAGATGATTTaGAGCGCCCAGAAGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: GANNLALPPPRSQTLGSPDTKMI*SAQKRM Trigger: CATCCGCTTCTGGGCGCTGCAAATCATCTTCGTGTC...GGGTGACCCCAGTGTCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACAGAGGGCTTGCTGGCTaGAGTCTGCTGCTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHLHLPLPGMPVALSHGNRGLAG*SLLLCH Trigger: GTGGCAGAGCAGCAGACTCCAGCCAGCAAGCCCTCT...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACCTGAAGAGGGCTTGCTaGCTGGAGTCTGCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LHLHLPLPGMPVALSHGNLKRAC*LESAAL Trigger: CAGAGCAGCAGACTCCAGCCAGCAAGCCCTCTTCAG...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR TCA 90 bp | AGCAAGCACTGCTGGGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGAGGCCATTGCAGTGTTTaGCTGGGTGGTTTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SKHCWEPTTLLCPHLDLRGHCSV*LGGFCL Trigger: AAGGCAGAAACCACCCAGTCAAACACTGCAATGGCC...TCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCCCAGCAGTGCTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | GCCACACCACCATCTTCCTCCTCTGTTGAAGGGCTTTCCAGGGTCTCTGCATCTTGCCTGGTCCAGTTCTaGTCTGTCGTCAGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ATPPSSSSVEGLSRVSASCLVQF*SVVRWW Trigger: CCACCACCTGACGACAGAGCAGAACTGGACCAGGCA...AGATGCAGAGACCCTGGAAAGCCCTTCAACAGAGGAGGAAGATGGTGGTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | GCCACACCACCATCTTCCTCCTCTGTTGAAGGGCTTTCCAGGGTCTCTGCATCTCGTTGCTGGACTTGCTaGACCTTCCTGGGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ATPPSSSSVEGLSRVSASRCWTC*TFLGPG Trigger: TCCTGGACCCAGGAAGGTCCAGCAAGTCCAGCAACG...AGATGCAGAGACCCTGGAAAGCCCTTCAACAGAGGAGGAAGATGGTGGTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR TCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGCTGTGTGTTGCAGGTaGAGTCCGATTGCTCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSAVCCR*SPIARR Trigger: GCGACGAGCAATCGGACTTCACCTGCAACACACAGC...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR TCA 90 bp | CACCTGTTGCTTCATCATGACAGAATAGTGGAGGAGGCCGAACAAGAGCAAGCAAGGGCTGGATGCTGCTaGAGAGGGCTTGCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HLLLHHDRIVEEAEQEQARAGCC*RGLAGW Trigger: CCAGCCAGCAAGCCCTCTTCAGCAGCATCCAGCCCT...TGCTTGCTCTTGTTCGGCCTCCTCCACTATTCTGTCATGATGAAGCAACAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCTTGCTGGCTGGAGTCTaGTGCTCTGCCACTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSLLAGV*CSATCL Trigger: CAGGCAAGTGGCAGAGCAGCAGACTCCAGCCAGCAA...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | CACCTGTTGCTTCATCATGACAGAATAGTGGAGGAGGCCGAACAAGAGCAAGCAAACAGTCCACAGTGTTaGGGCAGGGCCAGCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: HLLLHHDRIVEEAEQEQANSPQC*GRASGR Trigger: GCGACCGCTGGCCCTGCCCCAACACTGTGGACTGTT...TGCTTGCTCTTGTTCGGCCTCCTCCACTATTCTGTCATGATGAAGCAACAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCCCAAGGGCTTGTGCCTaGCTTCTGAGGCATCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSPRACA*LLRHLG Trigger: ACCCAGATGCCTCAGAAGCCAGGCACAAGCCCTTGG...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | AGCAAGCACTGCTGGGAGCCAACAACCTTGCTCTGCCCCCACCTCGATCTCAGAGTGTGTGTAATAAGGTaGGAACCCGATGGAGACGCT | + |
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Preference number: 4 (lower is better) Translates to: SKHCWEPTTLLCPHLDLRVCVIR*EPDGDA Trigger: AGCGTCTCCATCGGGTTCCCACCTTATTACACACAC...TCTGAGATCGAGGTGGGGGCAGAGCAAGGTTGTTGGCTCCCAGCAGTGCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR TCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCCTTGTGCCTGGCTTCTaGGGCATCTGGGTTGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSLVPGF*GIWVEV Trigger: CACTTCAACCCAGATGCCTCAGAAGCCAGGCACAAG...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | CACCTGTTGCTTCATCATGACAGAATAGTGGAGGAGGCCGAACAAGAGCAAGCACAGGTGAAGTCCGATTaGTCGTCGCCCCACACCTCC | + |
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Preference number: 4 (lower is better) Translates to: HLLLHHDRIVEEAEQEQAQVKSD*SSPHTS Trigger: GGAGGTGTGGGGCGACGAGCAATCGGACTTCACCTG...TGCTTGCTCTTGTTCGGCCTCCTCCACTATTCTGTCATGATGAAGCAACAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACTCTTCTTCTCCTCCATaGGCACGATGTGTAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: LHLHLPLPGMPVALSHGNSSSPP*ARCVAR Trigger: ACGTGCTACACATCGTGCGCATGGAGGAGAAGAAGA...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR TCA 90 bp | GCCACACCACCATCTTCCTCCTCTGTTGAAGGGCTTTCCAGGGTCTCTGCATCTAAATCTCCAGCATGTTaGGTACCAGTGACGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: ATPPSSSSVEGLSRVSASKSPAC*VPVTHR Trigger: CCTGTGCGTCACTGGTACTCAACATGCTGGAGATTT...AGATGCAGAGACCCTGGAAAGCCCTTCAACAGAGGAGGAAGATGGTGGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR TCA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACTTAGAGTCACCACTGTaGAGTCTGCTGGTGATAGTG | + |
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Preference number: 4 (lower is better) Translates to: LHLHLPLPGMPVALSHGNLESPL*SLLVIV Trigger: CACTATCACCAGCAGACTTCACAGTGGTGACTCTAA...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGAGGGTGGTTTCTGCCTTaGGCATCGTTTAGAGTCACC | + |
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Preference number: 4 (lower is better) Translates to: QPAVGCPGPHMQFQKLKRGWFLP*ASFRVT Trigger: GGTGACTCTAAACGATGCTCAAGGCAGAAACCACCC...TCGCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | GCCACACCACCATCTTCCTCCTCTGTTGAAGGGCTTTCCAGGGTCTCTGCATCTTGGTTAGTAACTCCCTaGTTGAGCTTCTTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATPPSSSSVEGLSRVSASWLVTP*LSFFQP Trigger: GGGCTGGAAGAAGCTCAAGCAGGGAGTTACTAACCA...AGATGCAGAGACCCTGGAAAGCCCTTCAACAGAGGAGGAAGATGGTGGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR GCA 90 bp | CACCTGTTGCTTCATCATGACAGAATAGTGGAGGAGGCCGAACAAGAGCAAGCATGGAGTCTGCTGCTCTaGCACTTGCCTGGTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLLHHDRIVEEAEQEQAWSLLL*HLPGPV Trigger: AACTGGACCAGGCAAGTGGCAGAGCAGCAGACTCCA...TGCTTGCTCTTGTTCGGCCTCCTCCACTATTCTGTCATGATGAAGCAACAGGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | CACCTGTTGCTTCATCATGACAGAATAGTGGAGGAGGCCGAACAAGAGCAAGCACCTTTGCCTGTACTGTaGGACAGGCAGGGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLLHHDRIVEEAEQEQAPLPVL*DRQGVC Trigger: ACACACACCCTGCCTGTCCCACAGTACAGGCAAAGG...TGCTTGCTCTTGTTCGGCCTCCTCCACTATTCTGTCATGATGAAGCAACAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGCATCTGGGTTGAAGTaGTTAGTAACTCCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSASGLK*LVTPCL Trigger: CAAGCAGGGAGTTACTAACCACTTCAACCCAGATGC...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| 3UTR CAA 72 bp | ATAGAGCTTAAGTGCCTCTGTGACTCTCTGGGCTGCTaGGAGAGCTTAGGAATGGAAACTGAATTGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IELKCLCDSLGC*ESLGMETELSP Trigger: GGGGGACAATTCAGTTTCCATTCCTAAGCTCTCCAAGCAGCCCAGAGAGTCACAGAGGCACTTAAGCTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 90 bp | GTGGGAACCCGATGGAGACGCTGGGCGGGCCAGAGCTGGTGGCCGTaGGTAGGGGGTCCAAGGGCTTGTGCCTGGCTTCTGAGGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGTRWRRWAGQSWWP*VGGPRACAWLLRHL Trigger: CAGATGCCTCAGAAGCCAGGCACAAGCCCTTGGACCCCCTACCCACGGCCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 90 bp | AATAAGGTGGGAACCCGATGGAGACGCTGGGCGGGCCAGAGCTGGTaGCCGTGGGTAGGGGGTCCAAGGGCTTGTGCCTGGCTTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKVGTRWRRWAGQSW*PWVGGPRACAWLLR Trigger: CCTCAGAAGCCAGGCACAAGCCCTTGGACCCCCTACCCACGGCCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCACCTTATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS TCA 90 bp | TCCCGCGGGCTCCCTGTACGCATTGGCTCGCGACCACGGCCGTGCTaGGGGTTGTCTCTCCTCAGCAGCTCTTCCTCCCGCTCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGLPVRIGSRPRPC*GLSLLSSSSSRSFF Trigger: GAAGAAAGAGCGGGAGGAAGAGCTGCTGAGGAGAGACAACCCTCAGCACGGCCGTGGTCGCGAGCCAATGCGTACAGGGAGCCCGCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 90 bp | TGTAATAAGGTGGGAACCCGATGGAGACGCTGGGCGGGCCAGAGCTaGTGGCCGTGGGTAGGGGGTCCAAGGGCTTGTGCCTGGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CNKVGTRWRRWAGQS*WPWVGGPRACAWLL Trigger: CAGAAGCCAGGCACAAGCCCTTGGACCCCCTACCCACGGCCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCACCTTATTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 90 bp | GTACTGTGGGACAGGCAGGGTGTGTGTAATAAGGTGGGAACCCGATaGAGACGCTGGGCGGGCCAGAGCTGGTGGCCGTGGGTAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLWDRQGVCNKVGTR*RRWAGQSWWPWVGG Trigger: ACCCCCTACCCACGGCCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCACCTTATTACACACACCCTGCCTGTCCCACAGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CCA 90 bp | GGCCTTTGCCTGTACTGTGGGACAGGCAGGGTGTGTGTAATAAGGTaGGAACCCGATGGAGACGCTGGGCGGGCCAGAGCTGGTGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLCLYCGTGRVCVIR*EPDGDAGRARAGGR Trigger: ACGGCCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCACCTTATTACACACACCCTGCCTGTCCCACAGTACAGGCAAAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CCA 90 bp | GCCCCTTGCGGCCATCAGGGCTGGATGCTGCTGAAGAGGGCTTGCTaGCTGGAGTCTGCTGCTCTGCCACTTGCCTGGTCCAGTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: APCGHQGWMLLKRAC*LESAALPLAWSSSA Trigger: AGCAGAACTGGACCAGGCAAGTGGCAGAGCAGCAGACTCCAGCCAGCAAGCCCTCTTCAGCAGCATCCAGCCCTGATGGCCGCAAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 90 bp | GTCACCTGGTCTGGCACGTCCGTTGCTGGACTTGCTGGACCTTCCTaGGTCCAGGAGGACCAACGGTGGCGAGTGCATCTCCACTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTWSGTSVAGLAGPS*VQEDQRWRVHLHCG Trigger: ACCACAGTGGAGATGCACTCGCCACCGTTGGTCCTCCTGGACCCAGGAAGGTCCAGCAAGTCCAGCAACGGACGTGCCAGACCAGGTGAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS TCA 90 bp | ACTGCTGTCAATGAGCCCCTTGCGGCCATCAGGGCTGGATGCTGCTaGAGAGGGCTTGCTGGCTGGAGTCTGCTGCTCTGCCACTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TAVNEPLAAIRAGCC*RGLAGWSLLLCHLP Trigger: AGGCAAGTGGCAGAGCAGCAGACTCCAGCCAGCAAGCCCTCTTCAGCAGCATCCAGCCCTGATGGCCGCAAGGGGCTCATTGACAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS GCA 90 bp | CCATCAGGGCTGGATGCTGCTGAAGAGGGCTTGCTGGCTGGAGTCTaGTGCTCTGCCACTTGCCTGGTCCAGTTCTGCTCTGTCGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSGLDAAEEGLLAGV*CSATCLVQFCSVVR Trigger: CCTGACGACAGAGCAGAACTGGACCAGGCAAGTGGCAGAGCAGCAGACTCCAGCCAGCAAGCCCTCTTCAGCAGCATCCAGCCCTGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 90 bp | AGATGGCCAAGTCACCTGGTCTGGCACGTCCGTTGCTGGACTTGCTaGACCTTCCTGGGTCCAGGAGGACCAACGGTGGCGAGTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RWPSHLVWHVRCWTC*TFLGPGGPTVASAS Trigger: AGATGCACTCGCCACCGTTGGTCCTCCTGGACCCAGGAAGGTCCAGCAAGTCCAGCAACGGACGTGCCAGACCAGGTGACTTGGCCATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACGCTGCTGAAGAGGGCTaGCTGGCTGGAGTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLHLPLPGMPVALSHGNAAEEG*LAGVCC Trigger: GCAGCAGACTCCAGCCAGCAAGCCCTCTTCAGCAGC...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS TCA 90 bp | TCACTACCAAGGCACTCTCCTGTAAGCTGCTGCCACTGCTGTCAATaGGCCCCTTGCGGCCATCAGGGCTGGATGCTGCTGAAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPRHSPVSCCHCCQ*APCGHQGWMLLKRA Trigger: AGCCCTCTTCAGCAGCATCCAGCCCTGATGGCCGCAAGGGGCTCATTGACAGCAGTGGCAGCAGCTTACAGGAGAGTGCCTTGGTAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | GCCACACCACCATCTTCCTCCTCTGTTGAAGGGCTTTCCAGGGTCTCTGCATCTGCAGGTGAAGTCCGATaGCTCGTCGCCCCACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATPPSSSSVEGLSRVSASAGEVR*LVAPHL Trigger: GAGGTGTGGGGCGACGAGCAATCGGACTTCACCTGC...AGATGCAGAGACCCTGGAAAGCCCTTCAACAGAGGAGGAAGATGGTGGTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACCTGCTGCTCTGCCACTaGCCTGGTCCAGTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHLHLPLPGMPVALSHGNLLLCH*PGPVLL Trigger: GAGCAGAACTGGACCAGGCAAGTGGCAGAGCAGCAG...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACCCTGGCTGCTGTGTGTaGCAGGTGAAGTCCGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLHLPLPGMPVALSHGNPGCCV*QVKSDC Trigger: GCAATCGGACTTCACCTGCAACACACAGCAGCCAGG...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 90 bp | GTGATAGTGGGGCCCCAGGAAACCCTATGGCCTTTGCCTGTACTGTaGGACAGGCAGGGTGTGTGTAATAAGGTGGGAACCCGATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VIVGPQETLWPLPVL*DRQGVCNKVGTRWR Trigger: TCTCCATCGGGTTCCCACCTTATTACACACACCCTGCCTGTCCCACAGTACAGGCAAAGGCCATAGGGTTTCCTGGGGCCCCACTATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | GCCACACCACCATCTTCCTCCTCTGTTGAAGGGCTTTCCAGGGTCTCTGCATCTGTCAGGTGGTGGCCATaGCAGTGTTTGACTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATPPSSSSVEGLSRVSASVRWWP*QCLTGW Trigger: CCACCCAGTCAAACACTGCAATGGCCACCACCTGAC...AGATGCAGAGACCCTGGAAAGCCCTTCAACAGAGGAGGAAGATGGTGGTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | CAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGAGGTCTGGCACGTCCGTaGCTGGACTTGCTGGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: QPAVGCPGPHMQFQKLKRGLARP*LDLLDL Trigger: AAGGTCCAGCAAGTCCAGCAACGGACGTGCCAGACC...TCGCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | CTGCATCTCCACCTGCCTCTACCAGGAATGCCTGTGGCCTTGTCCCATGGAAACTTAGTAACTCCCTGCTaGAGCTTCTTCCAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHLHLPLPGMPVALSHGNLVTPC*SFFQPR Trigger: CCTGGGCTGGAAGAAGCTCAAGCAGGGAGTTACTAA...GTTTCCATGGGACAAGGCCACAGGCATTCCTGGTAGAGGCAGGTGGAGATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | CAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGAACGGTCAGCCACACTTaGCCGATGACTGTAGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPAVGCPGPHMQFQKLKRTVSHT*PMTVEC Trigger: GCACTCTACAGTCATCGGCAAAGTGTGGCTGACCGT...TCGCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | TGCAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGAAACCCTATGGCCTTaGCCTGTACTGTGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSLQLDVLDLTCNSRSSSETLWP*PVLWDR Trigger: CCTGTCCCACAGTACAGGCAAAGGCCATAGGGTTTC...GCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS-3UTR CAA 90 bp | CAGCCTGCAGTTGGATGTCCTGGACCTCACATGCAATTCCAGAAGCTCAAGCGATCTGAGGCATCTGGGTaGAAGTGGTTAGTAACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QPAVGCPGPHMQFQKLKRSEASG*KWLVTP Trigger: GGGAGTTACTAACCACTTCAACCCAGATGCCTCAGA...TCGCTTGAGCTTCTGGAATTGCATGTGAGGTCCAGGACATCCAACTGCAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS GCA 72 bp | CGTAGGTCCGCAGCAGCGCACCTGCGATGCGCACCTTaGCACGGTCATCGCGTAGTGGAGGGTCCCGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSAAAHLRCAP*HGHRVVEGPAG Trigger: GCCCGCGGGACCCTCCACTACGCGATGACCGTGGCAAGGTGCGCATCGCAGGTGCGCTGCTGCGGACCTACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 72 bp | GTGGGAACCCGATGGAGACGCTGGGCGGGCCAGAGCTaGTGGCCGTGGGTAGGGGGTCCAAGGGCTTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGTRWRRWAGQS*WPWVGGPRACA Trigger: GGCACAAGCCCTTGGACCCCCTACCCACGGCCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS TCA 72 bp | CTCCCTGTACGCATTGGCTCGCGACCACGGCCGTGCTaGGGGTTGTCTCTCCTCAGCAGCTCTTCCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LPVRIGSRPRPC*GLSLLSSSSSR Trigger: GCGGGAGGAAGAGCTGCTGAGGAGAGACAACCCTCAGCACGGCCGTGGTCGCGAGCCAATGCGTACAGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 72 bp | GACAGGCAGGGTGTGTGTAATAAGGTGGGAACCCGATaGAGACGCTGGGCGGGCCAGAGCTGGTGGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DRQGVCNKVGTR*RRWAGQSWWPW Trigger: CCACGGCCACCAGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCACCTTATTACACACACCCTGCCTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS GCA 72 bp | TGCGGCCATCAGGGCTGGATGCTGCTGAAGAGGGCTTaGTGGCTGGAGTCTGCTGCTCTGCCACTTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CGHQGWMLLKRA*WLESAALPLAW Trigger: CCAGGCAAGTGGCAGAGCAGCAGACTCCAGCCAGCAAGCCCTCTTCAGCAGCATCCAGCCCTGATGGCCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS GCA 72 bp | GACCTTCCTGGGTCCAGGAGGACCAACGGTGGCGAGTaGATCTCCACTGTGGTGGCCAAAGCCTGTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DLPGSRRTNGGE*ISTVVAKACSP Trigger: GGGGGAACAGGCTTTGGCCACCACAGTGGAGATGCACTCGCCACCGTTGGTCCTCCTGGACCCAGGAAGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CAA 90 bp | CTGGGCGGGCCAGAGCTGGTGGCCGTGGGTAGGGGGTCCAAGGGCTaGTGCCTGGCTTCTGAGGCATCTGGGTTGAAGTGGTTAGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: LGGPELVAVGRGSKG*CLASEASGLKWLVT Trigger: AGTTACTAACCACTTCAACCCAGATGCCTCAGAAGCCAGGCACAAGCCCTTGGACCCCCTACCCACGGCCACCAGCTCTGGCCCGCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 72 bp | GGAGGACCAACGGTGGCGAGTGCATCTCCACTGTGGTaGCCAAAGCCTGTTCCCCCTCCTCTGGCGTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: GGPTVASASPLW*PKPVPPPLASL Trigger: TAGTGACGCCAGAGGAGGGGGAACAGGCTTTGGCCACCACAGTGGAGATGCACTCGCCACCGTTGGTCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 72 bp | CTTGCTGGACCTTCCTGGGTCCAGGAGGACCAACGGTaGCGAGTGCATCTCCACTGTGGTGGCCAAAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAGPSWVQEDQR*RVHLHCGGQSL Trigger: CAGGCTTTGGCCACCACAGTGGAGATGCACTCGCCACCGTTGGTCCTCCTGGACCCAGGAAGGTCCAGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 72 bp | TCTGGCACGTCCGTTGCTGGACTTGCTGGACCTTCCTaGGTCCAGGAGGACCAACGGTGGCGAGTGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGTSVAGLAGPS*VQEDQRWRVHL Trigger: GAGATGCACTCGCCACCGTTGGTCCTCCTGGACCCAGGAAGGTCCAGCAAGTCCAGCAACGGACGTGCCAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS TCA 72 bp | AGGCACTCTCCTGTAAGCTGCTGCCACTGCTGTCAATaGGCCCCTTGCGGCCATCAGGGCTGGATGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RHSPVSCCHCCQ*APCGHQGWMLL Trigger: CAGCAGCATCCAGCCCTGATGGCCGCAAGGGGCTCATTGACAGCAGTGGCAGCAGCTTACAGGAGAGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CCA 72 bp | CTGTACTGTGGGACAGGCAGGGTGTGTGTAATAAGGTaGGAACCCGATGGAGACGCTGGGCGGGCCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LYCGTGRVCVIR*EPDGDAGRARA Trigger: AGCTCTGGCCCGCCCAGCGTCTCCATCGGGTTCCCACCTTATTACACACACCCTGCCTGTCCCACAGTACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CAA 72 bp | TCCTGTAAGCTGCTGCCACTGCTGTCAATGAGCCCCTaGCGGCCATCAGGGCTGGATGCTGCTGAAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCKLLPLLSMSP*RPSGLDAAEEG Trigger: GCCCTCTTCAGCAGCATCCAGCCCTGATGGCCGCAAGGGGCTCATTGACAGCAGTGGCAGCAGCTTACAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CAA 90 bp | AAGGCACTCTCCTGTAAGCTGCTGCCACTGCTGTCAATGAGCCCCTaGCGGCCATCAGGGCTGGATGCTGCTGAAGAGGGCTTGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KALSCKLLPLLSMSP*RPSGLDAAEEGLLA Trigger: AGCCAGCAAGCCCTCTTCAGCAGCATCCAGCCCTGATGGCCGCAAGGGGCTCATTGACAGCAGTGGCAGCAGCTTACAGGAGAGTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CCA 72 bp | AGTCTGCTGGTGATAGTGGGGCCCCAGGAAACCCTATaGCCTTTGCCTGTACTGTGGGACAGGCAGGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLVIVGPQETL*PLPVLWDRQGV Trigger: CACACCCTGCCTGTCCCACAGTACAGGCAAAGGCCATAGGGTTTCCTGGGGCCCCACTATCACCAGCAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CAA 90 bp | GGTAGGGGGTCCAAGGGCTTGTGCCTGGCTTCTGAGGCATCTGGGTaGAAGTGGTTAGTAACTCCCTGCTTGAGCTTCTTCCAGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGSKGLCLASEASG*KWLVTPCLSFFQPR Trigger: CCTGGGCTGGAAGAAGCTCAAGCAGGGAGTTACTAACCACTTCAACCCAGATGCCTCAGAAGCCAGGCACAAGCCCTTGGACCCCCTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS GCA 72 bp | GGAGTCTGCTGCTCTGCCACTTGCCTGGTCCAGTTCTaGTCTGTCGTCAGGTGGTGGCCATTGCAGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVCCSATCLVQF*SVVRWWPLQCL Trigger: CAAACACTGCAATGGCCACCACCTGACGACAGAGCAGAACTGGACCAGGCAAGTGGCAGAGCAGCAGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CCA 72 bp | GGGCCCCAGGAAACCCTATGGCCTTTGCCTGTACTGTaGGACAGGCAGGGTGTGTGTAATAAGGTGGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: GPQETLWPLPVL*DRQGVCNKVGT Trigger: GGTTCCCACCTTATTACACACACCCTGCCTGTCCCACAGTACAGGCAAAGGCCATAGGGTTTCCTGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CCA 72 bp | GCCACTTGCCTGGTCCAGTTCTGCTCTGTCGTCAGGTaGTGGCCATTGCAGTGTTTGACTGGGTGGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATCLVQFCSVVR*WPLQCLTGWFL Trigger: CAGAAACCACCCAGTCAAACACTGCAATGGCCACCACCTGACGACAGAGCAGAACTGGACCAGGCAAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
||
| CDS CAA 72 bp | CTGGTGATAGTGGGGCCCCAGGAAACCCTATGGCCTTaGCCTGTACTGTGGGACAGGCAGGGTGTGTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LVIVGPQETLWP*PVLWDRQGVCN Trigger: ATTACACACACCCTGCCTGTCCCACAGTACAGGCAAAGGCCATAGGGTTTCCTGGGGCCCCACTATCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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| CDS CAA 72 bp | TCCAAGGGCTTGTGCCTGGCTTCTGAGGCATCTGGGTaGAAGTGGTTAGTAACTCCCTGCTTGAGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SKGLCLASEASG*KWLVTPCLSFF Trigger: GAAGAAGCTCAAGCAGGGAGTTACTAACCACTTCAACCCAGATGCCTCAGAAGCCAGGCACAAGCCCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061614.8 |
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