Pregenerated sensors for GJA10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051056Ensembl transcript IDs: ENSMUST00000056517.3, ENSMUST00000219644.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCTTGGGGCCAAAGACAGAATGGCACGGTTGCTGTCCAGGGTGCTaGATTCTGGCACTGCGGTCATGTGGGCAGGGGCTGTGGACGTGG | + |
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Preference number: 5 (lower is better) Translates to: FLGPKTEWHGCCPGC*ILALRSCGQGLWTW Trigger: CCACGTCCACAGCCCCTGCCCACATGACCGCAGTGCCAGAATTCAGCACCCTGGACAGCAACCGTGCCATTCTGTCTTTGGCCCCAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 90 bp | CTCTTGCACTGCCGTCACTGCCTTGGAAGTGACTCTGGCGATCTGTaGGAGATCTCCCTGAAGCTTCTGGGCCCTGGGATCGCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLHCRHCLGSDSGDL*EISLKLLGPGIAPR Trigger: CCTGGGAGCGATCCCAGGGCCCAGAAGCTTCAGGGAGATCTCTCACAGATCGCCAGAGTCACTTCCAAGGCAGTGACGGCAGTGCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 90 bp | GTCCAAACCCCACTCTCTCTTGCACTGCCGTCACTGCCTTGGAAGTaGCTCTGGCGATCTGTGAGAGATCTCCCTGAAGCTTCTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: VQTPLSLALPSLPWK*LWRSVRDLPEASGP Trigger: GGGCCCAGAAGCTTCAGGGAGATCTCTCACAGATCGCCAGAGTCACTTCCAAGGCAGTGACGGCAGTGCAAGAGAGAGTGGGGTTTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 90 bp | GCCGTTGTCCCTTTTCTGACATCAGCCTCGATAGAAAGCTGGCCTTaGGACTTCCTGGGCCTAATCTGTCTGTCCAAACCCCACTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: AVVPFLTSASIESWP*DFLGLICLSKPHSL Trigger: GAGAGAGTGGGGTTTGGACAGACAGATTAGGCCCAGGAAGTCGCAAGGCCAGCTTTCTATCGAGGCTGATGTCAGAAAAGGGACAACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 90 bp | CTCTTCTGCTCCTCGAGTCTCCTCAGCTCTTTATCTACCCTTTGTTaGTCCTCCAGGTCGAGCTCTGGATTCTCCATCTGGGCTCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: LFCSSSLLSSLSTLC*SSRSSSGFSIWALR Trigger: CCTTAGAGCCCAGATGGAGAATCCAGAGCTCGACCTGGAGGAGCAACAAAGGGTAGATAAAGAGCTGAGGAGACTCGAGGAGCAGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 90 bp | CACTATGCCGTTGTCCCTTTTCTGACATCAGCCTCGATAGAAAGCTaGCCTTGCGACTTCCTGGGCCTAATCTGTCTGTCCAAACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: HYAVVPFLTSASIES*PCDFLGLICLSKPH Trigger: GTGGGGTTTGGACAGACAGATTAGGCCCAGGAAGTCGCAAGGCCAGCTTTCTATCGAGGCTGATGTCAGAAAAGGGACAACGGCATAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 90 bp | GGAGGTGAATCAACATGGCTGCTTTTACTTACCATCGATGCTCTGTaGCCAGTGGCAGACGGCAGAGGTGATGGGCTATTTTCTCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: GGESTWLLLLTIDAL*PVADGRGDGLFSPC Trigger: ACACGGAGAAAATAGCCCATCACCTCTGCCGTCTGCCACTGGGCACAGAGCATCGATGGTAAGTAAAAGCAGCCATGTTGATTCACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056517.3 |
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| CDS CCA 90 bp | GAGAAGCCGTCATTGTACCGAACCAAGACTGAGACATTGCATTCTTaGGGCCAAAGACAGAATGGCACGGTTGCTGTCCAGGGTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: EKPSLYRTKTETLHS*GQRQNGTVAVQGAE Trigger: TTCAGCACCCTGGACAGCAACCGTGCCATTCTGTCTTTGGCCCCAAGAATGCAATGTCTCAGTCTTGGTTCGGTACAATGACGGCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 90 bp | TCCAAGCAGGAACTATTCAGAGACCGTGAGCTTCCTGAGTCACTATaGCGTTGTCCCTTTTCTGACATCAGCCTCGATAGAAAGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: SKQELFRDRELPESL*RCPFSDISLDRKLA Trigger: GGCCAGCTTTCTATCGAGGCTGATGTCAGAAAAGGGACAACGGCATAGTGACTCAGGAAGCTCACGGTCTCTGAATAGTTCCTGCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 90 bp | TCTACCCTTTGTTGCTCCTCCAGGTCGAGCTCTGGATTCTCCATCTaGGCTCTAAGGTATAACTTCTTCTTCTGCCTCTGCTTCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: STLCCSSRSSSGFSI*ALRYNFFFCLCFSK Trigger: CTTTGAGAAGCAGAGGCAGAAGAAGAAGTTATACCTTAGAGCCCAGATGGAGAATCCAGAGCTCGACCTGGAGGAGCAACAAAGGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 90 bp | GCCTGTTTCGTTCTCAGTGTTCCCACTGCTGGATTTGCCATCGAGTaGCCTCATGATTTTCCTGATGCCGAGATGAAATATTTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: ACFVLSVPTAGFAIE*PHDFPDAEMKYFQD Trigger: ATCCTGGAAATATTTCATCTCGGCATCAGGAAAATCATGAGGGCACTCGATGGCAAATCCAGCAGTGGGAACACTGAGAACGAAACAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 90 bp | TTGCCACAGGATACATCTACCTCAAGTTGCCTGGGGTGTGGAATTTaGCACATGCTTTTAGACCGTGGTATATTGACTCGGATGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: LPQDTSTSSCLGCGI*HMLLDRGILTRMTC Trigger: GCAAGTCATCCGAGTCAATATACCACGGTCTAAAAGCATGTGGCAAATTCCACACCCCAGGCAACTTGAGGTAGATGTATCCTGTGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 90 bp | ACCCTACTTCTAGCACTGATCTGGTCAGGATGTGTAAGACATAGGTaGGCAGCAGACATCCTTTCAGAGGGACTTTATGAATCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TLLLALIWSGCVRHR*AADILSEGLYESSS Trigger: AGAAGAGGATTCATAAAGTCCCTCTGAAAGGATGTCTGCTGCGCACCTATGTCTTACACATCCTGACCAGATCAGTGCTAGAAGTAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 90 bp | CTCAAGTTGCCTGGGGTGTGGAATTTGCCACATGCTTTTAGACCGTaGTATATTGACTCGGATGACTTGCTGTTTATTGTTGGCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LKLPGVWNLPHAFRP*YIDSDDLLFIVGLK Trigger: CTTCAAGCCAACAATAAACAGCAAGTCATCCGAGTCAATATACCACGGTCTAAAAGCATGTGGCAAATTCCACACCCCAGGCAACTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 90 bp | CTGGATTTGCCATCGAGTGCCCTCATGATTTTCCTGATGCCGAGATaGAATATTTCCAGGATATTGAGTAACAAGGAGATGGCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: LDLPSSALMIFLMPR*NISRILSNKEMAAM Trigger: CATTGCAGCCATCTCCTTGTTACTCAATATCCTGGAAATATTTCATCTCGGCATCAGGAAAATCATGAGGGCACTCGATGGCAAATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 90 bp | AAATGGGGTGCATTTGAAACCCATAGAGAATATATTGGCCTATCATaGACCCTACTTCTAGCACTGATCTGGTCAGGATGTGTAAGACAT | + |
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Preference number: 5 (lower is better) Translates to: KWGAFETHREYIGLS*TLLLALIWSGCVRH Trigger: ATGTCTTACACATCCTGACCAGATCAGTGCTAGAAGTAGGGTTCATGATAGGCCAATATATTCTCTATGGGTTTCAAATGCACCCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | GGCACGGTTGCTGTCCAGGGTGCTGAATTCTGGCACTaGGGTCATGTGGGCAGGGGCTGTGGACGTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GTVAVQGAEFWH*GHVGRGCGRGA Trigger: AGCTCCACGTCCACAGCCCCTGCCCACATGACCGCAGTGCCAGAATTCAGCACCCTGGACAGCAACCGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 72 bp | CAGAATGGCACGGTTGCTGTCCAGGGTGCTGAATTCTaGCACTGCGGTCATGTGGGCAGGGGCTGTGGACGT | + |
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Preference number: 6 (lower is better) Translates to: QNGTVAVQGAEF*HCGHVGRGCGR Trigger: ACGTCCACAGCCCCTGCCCACATGACCGCAGTGCCAGAATTCAGCACCCTGGACAGCAACCGTGCCATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 72 bp | CCAAAGACAGAATGGCACGGTTGCTGTCCAGGGTGCTaGATTCTGGCACTGCGGTCATGTGGGCAGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PKTEWHGCCPGC*ILALRSCGQGL Trigger: CAGCCCCTGCCCACATGACCGCAGTGCCAGAATTCAGCACCCTGGACAGCAACCGTGCCATTCTGTCTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 72 bp | TGCCGTCACTGCCTTGGAAGTGACTCTGGCGATCTGTaGGAGATCTCCCTGAAGCTTCTGGGCCCTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: CRHCLGSDSGDL*EISLKLLGPGI Trigger: GATCCCAGGGCCCAGAAGCTTCAGGGAGATCTCTCACAGATCGCCAGAGTCACTTCCAAGGCAGTGACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | CCAAACCCCACTCTCTCTTGCACTGCCGTCACTGCCTaGGAAGTGACTCTGGCGATCTGTGAGAGATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PNPTLSCTAVTA*EVTLAICERSP Trigger: GGGAGATCTCTCACAGATCGCCAGAGTCACTTCCAAGGCAGTGACGGCAGTGCAAGAGAGAGTGGGGTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | CTGGGCCTAATCTGTCTGTCCAAACCCCACTCTCTCTaGCACTGCCGTCACTGCCTTGGAAGTGACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LGLICLSKPHSL*HCRHCLGSDSG Trigger: GCCAGAGTCACTTCCAAGGCAGTGACGGCAGTGCAAGAGAGAGTGGGGTTTGGACAGACAGATTAGGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 72 bp | CCACTCTCTCTTGCACTGCCGTCACTGCCTTGGAAGTaGCTCTGGCGATCTGTGAGAGATCTCCCTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: PLSLALPSLPWK*LWRSVRDLPEA Trigger: AGCTTCAGGGAGATCTCTCACAGATCGCCAGAGTCACTTCCAAGGCAGTGACGGCAGTGCAAGAGAGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | CATTGCATTCTTGGGGCCAAAGACAGAATGGCACGGTaGCTGTCCAGGGTGCTGAATTCTGGCACTGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: HCILGAKDRMAR*LSRVLNSGTAV Trigger: GACCGCAGTGCCAGAATTCAGCACCCTGGACAGCAACCGTGCCATTCTGTCTTTGGCCCCAAGAATGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | AGACTGAGACATTGCATTCTTGGGGCCAAAGACAGAATGGCACGGTaGCTGTCCAGGGTGCTGAATTCTGGCACTGCGGTCATGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RLRHCILGAKDRMAR*LSRVLNSGTAVMWA Trigger: TGCCCACATGACCGCAGTGCCAGAATTCAGCACCCTGGACAGCAACCGTGCCATTCTGTCTTTGGCCCCAAGAATGCAATGTCTCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | GGGCCTGTTTCGTTCTCAGTGTTCCCACTGCTGGATTaGCCATCGAGTGCCCTCATGATTTTCCTGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: GPVSFSVFPLLD*PSSALMIFLMP Trigger: CGGCATCAGGAAAATCATGAGGGCACTCGATGGCAAATCCAGCAGTGGGAACACTGAGAACGAAACAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | TGCCGTTGTCCCTTTTCTGACATCAGCCTCGATAGAAAGCTGGCCTaGCGACTTCCTGGGCCTAATCTGTCTGTCCAAACCCCACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CRCPFSDISLDRKLA*RLPGPNLSVQTPLS Trigger: AGAGAGTGGGGTTTGGACAGACAGATTAGGCCCAGGAAGTCGCAAGGCCAGCTTTCTATCGAGGCTGATGTCAGAAAAGGGACAACGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | TCCTCGAGTCTCCTCAGCTCTTTATCTACCCTTTGTTaGTCCTCCAGGTCGAGCTCTGGATTCTCCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSLLSSLSTLC*SSRSSSGFSIW Trigger: CCAGATGGAGAATCCAGAGCTCGACCTGGAGGAGCAACAAAGGGTAGATAAAGAGCTGAGGAGACTCGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 72 bp | GTTGTCCCTTTTCTGACATCAGCCTCGATAGAAAGCTaGCCTTGCGACTTCCTGGGCCTAATCTGTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VVPFLTSASIES*PCDFLGLICLS Trigger: GGACAGACAGATTAGGCCCAGGAAGTCGCAAGGCCAGCTTTCTATCGAGGCTGATGTCAGAAAAGGGACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | CTCCTCGAGTCTCCTCAGCTCTTTATCTACCCTTTGTaGCTCCTCCAGGTCGAGCTCTGGATTCTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LLESPQLFIYPL*LLQVELWILHL Trigger: CAGATGGAGAATCCAGAGCTCGACCTGGAGGAGCAACAAAGGGTAGATAAAGAGCTGAGGAGACTCGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | CTGCTCCTCGAGTCTCCTCAGCTCTTTATCTACCCTTaGTTGCTCCTCCAGGTCGAGCTCTGGATTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLLESPQLFIYP*LLLQVELWILH Trigger: ATGGAGAATCCAGAGCTCGACCTGGAGGAGCAACAAAGGGTAGATAAAGAGCTGAGGAGACTCGAGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | CCCTTTTCTGACATCAGCCTCGATAGAAAGCTGGCCTaGCGACTTCCTGGGCCTAATCTGTCTGTCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: PFSDISLDRKLA*RLPGPNLSVQT Trigger: GGTTTGGACAGACAGATTAGGCCCAGGAAGTCGCAAGGCCAGCTTTCTATCGAGGCTGATGTCAGAAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | GACGGTGTTGAGAAGCCGTCATTGTACCGAACCAAGACTGAGACATaGCATTCTTGGGGCCAAAGACAGAATGGCACGGTTGCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DGVEKPSLYRTKTET*HSWGQRQNGTVAVQ Trigger: CTGGACAGCAACCGTGCCATTCTGTCTTTGGCCCCAAGAATGCAATGTCTCAGTCTTGGTTCGGTACAATGACGGCTTCTCAACACCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | TCAACATGGCTGCTTTTACTTACCATCGATGCTCTGTaGCCAGTGGCAGACGGCAGAGGTGATGGGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: STWLLLLTIDAL*PVADGRGDGLF Trigger: AAATAGCCCATCACCTCTGCCGTCTGCCACTGGGCACAGAGCATCGATGGTAAGTAAAAGCAGCCATGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056517.3 |
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| CDS CCA 72 bp | TGTTGCTCCTCCAGGTCGAGCTCTGGATTCTCCATCTaGGCTCTAAGGTATAACTTCTTCTTCTGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CCSSRSSSGFSI*ALRYNFFFCLC Trigger: GCAGAGGCAGAAGAAGAAGTTATACCTTAGAGCCCAGATGGAGAATCCAGAGCTCGACCTGGAGGAGCAACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | ACGTGGAGCTGTGCACAGCTCTCAATTTTCTCAGCCCAGTCTCTTTaGCCACAGGATACATCTACCTCAAGTTGCCTGGGGTGTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: TWSCAQLSIFSAQSL*PQDTSTSSCLGCGI Trigger: AATTCCACACCCCAGGCAACTTGAGGTAGATGTATCCTGTGGCAAAAGAGACTGGGCTGAGAAAATTGAGAGCTGTGCACAGCTCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | CCCAGGTTTCTAACGCAGATGATGGACGGTGTTGAGAAGCCGTCATaGTACCGAACCAAGACTGAGACATTGCATTCTTGGGGCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: PRFLTQMMDGVEKPS*YRTKTETLHSWGQR Trigger: TCTTTGGCCCCAAGAATGCAATGTCTCAGTCTTGGTTCGGTACAATGACGGCTTCTCAACACCGTCCATCATCTGCGTTAGAAACCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 72 bp | TCATTGTACCGAACCAAGACTGAGACATTGCATTCTTaGGGCCAAAGACAGAATGGCACGGTTGCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLYRTKTETLHS*GQRQNGTVAVQ Trigger: CTGGACAGCAACCGTGCCATTCTGTCTTTGGCCCCAAGAATGCAATGTCTCAGTCTTGGTTCGGTACAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | TGTGCACAGCTCTCAATTTTCTCAGCCCAGTCTCTTTaGCCACAGGATACATCTACCTCAAGTTGCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CAQLSIFSAQSL*PQDTSTSSCLG Trigger: CCCCAGGCAACTTGAGGTAGATGTATCCTGTGGCAAAAGAGACTGGGCTGAGAAAATTGAGAGCTGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | GAGAAGCCGTCATTGTACCGAACCAAGACTGAGACATaGCATTCTTGGGGCCAAAGACAGAATGGCACGGTT | + |
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Preference number: 6 (lower is better) Translates to: EKPSLYRTKTET*HSWGQRQNGTV Trigger: AACCGTGCCATTCTGTCTTTGGCCCCAAGAATGCAATGTCTCAGTCTTGGTTCGGTACAATGACGGCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | GAACTATTCAGAGACCGTGAGCTTCCTGAGTCACTATaGCGTTGTCCCTTTTCTGACATCAGCCTCGATAGA | + |
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Preference number: 6 (lower is better) Translates to: ELFRDRELPESL*RCPFSDISLDR Trigger: TCTATCGAGGCTGATGTCAGAAAAGGGACAACGGCATAGTGACTCAGGAAGCTCACGGTCTCTGAATAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | GATGAAAGTTCTAGAAGCATATTCATCGATGCTCTGTaGCCAGTGGCAGACGGCAGAGGTGATGGGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: DESSRSIFIDAL*PVADGRGDGLF Trigger: AAATAGCCCATCACCTCTGCCGTCTGCCACTGGGCACAGAGCATCGATGAATATGCTTCTAGAACTTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219644.2 |
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| CDS CCA 72 bp | CTGAATTGGGGCAGGGGGCTTGGGTGCACTTGTAAATaGGGTGCATTTGAAACCCATAGAGAATATATTGGC | + |
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Preference number: 6 (lower is better) Translates to: LNWGRGLGCTCK*GAFETHREYIG Trigger: GCCAATATATTCTCTATGGGTTTCAAATGCACCCCATTTACAAGTGCACCCAAGCCCCCTGCCCCAATTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | CTAACGCAGATGATGGACGGTGTTGAGAAGCCGTCATaGTACCGAACCAAGACTGAGACATTGCATTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LTQMMDGVEKPS*YRTKTETLHSW Trigger: CCAAGAATGCAATGTCTCAGTCTTGGTTCGGTACAATGACGGCTTCTCAACACCGTCCATCATCTGCGTTAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | GTAAAGAAGAACAGATCATACACTGCTGGGTCCCTGAGTAGTTTGTaGAATGGAATGGAGGGCCTGTTTCGTTCTCAGTGTTCCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: VKKNRSYTAGSLSSL*NGMEGLFRSQCSHC Trigger: GCAGTGGGAACACTGAGAACGAAACAGGCCCTCCATTCCATTCAACAAACTACTCAGGGACCCAGCAGTGTATGATCTGTTCTTCTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | CAGGTAAAGAAGAACAGATCATACACTGCTGGGTCCCTGAGTAGTTaGTTGAATGGAATGGAGGGCCTGTTTCGTTCTCAGTGTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: QVKKNRSYTAGSLSS*LNGMEGLFRSQCSH Trigger: GTGGGAACACTGAGAACGAAACAGGCCCTCCATTCCATTCAACAAACTACTCAGGGACCCAGCAGTGTATGATCTGTTCTTCTTTACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 90 bp | TTTGCCACAGGATACATCTACCTCAAGTTGCCTGGGGTGTGGAATTaGCCACATGCTTTTAGACCGTGGTATATTGACTCGGATGACTTG | + |
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Preference number: 6 (lower is better) Translates to: FATGYIYLKLPGVWN*PHAFRPWYIDSDDL Trigger: CAAGTCATCCGAGTCAATATACCACGGTCTAAAAGCATGTGGCAAATTCCACACCCCAGGCAACTTGAGGTAGATGTATCCTGTGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | CTAGCACTGATCTGGTCAGGATGTGTAAGACATAGGTaGGCAGCAGACATCCTTTCAGAGGGACTTTATGAA | + |
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Preference number: 6 (lower is better) Translates to: LALIWSGCVRHR*AADILSEGLYE Trigger: TTCATAAAGTCCCTCTGAAAGGATGTCTGCTGCGCACCTATGTCTTACACATCCTGACCAGATCAGTGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | GTTCTCAGTGTTCCCACTGCTGGATTTGCCATCGAGTaGCCTCATGATTTTCCTGATGCCGAGATGAAATAT | + |
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Preference number: 6 (lower is better) Translates to: VLSVPTAGFAIE*PHDFPDAEMKY Trigger: ATATTTCATCTCGGCATCAGGAAAATCATGAGGGCACTCGATGGCAAATCCAGCAGTGGGAACACTGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS GCA 72 bp | GATACATCTACCTCAAGTTGCCTGGGGTGTGGAATTTaGCACATGCTTTTAGACCGTGGTATATTGACTCGG | + |
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Preference number: 6 (lower is better) Translates to: DTSTSSCLGCGI*HMLLDRGILTR Trigger: CCGAGTCAATATACCACGGTCTAAAAGCATGTGGCAAATTCCACACCCCAGGCAACTTGAGGTAGATGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 72 bp | GCCACAGGATACATCTACCTCAAGTTGCCTGGGGTGTaGAATTTGCCACATGCTTTTAGACCGTGGTATATT | + |
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Preference number: 6 (lower is better) Translates to: ATGYIYLKLPGV*NLPHAFRPWYI Trigger: AATATACCACGGTCTAAAAGCATGTGGCAAATTCCACACCCCAGGCAACTTGAGGTAGATGTATCCTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | AACAGATCATACACTGCTGGGTCCCTGAGTAGTTTGTaGAATGGAATGGAGGGCCTGTTTCGTTCTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: NRSYTAGSLSSL*NGMEGLFRSQC Trigger: ACACTGAGAACGAAACAGGCCCTCCATTCCATTCAACAAACTACTCAGGGACCCAGCAGTGTATGATCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CAA 72 bp | AAGAACAGATCATACACTGCTGGGTCCCTGAGTAGTTaGTTGAATGGAATGGAGGGCCTGTTTCGTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KNRSYTAGSLSS*LNGMEGLFRSQ Trigger: CTGAGAACGAAACAGGCCCTCCATTCCATTCAACAAACTACTCAGGGACCCAGCAGTGTATGATCTGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS CCA 72 bp | CCTGGGGTGTGGAATTTGCCACATGCTTTTAGACCGTaGTATATTGACTCGGATGACTTGCTGTTTATTGTT | + |
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Preference number: 6 (lower is better) Translates to: PGVWNLPHAFRP*YIDSDDLLFIV Trigger: AACAATAAACAGCAAGTCATCCGAGTCAATATACCACGGTCTAAAAGCATGTGGCAAATTCCACACCCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 72 bp | CCATCGAGTGCCCTCATGATTTTCCTGATGCCGAGATaGAATATTTCCAGGATATTGAGTAACAAGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: PSSALMIFLMPR*NISRILSNKEM Trigger: CATCTCCTTGTTACTCAATATCCTGGAAATATTTCATCTCGGCATCAGGAAAATCATGAGGGCACTCGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 72 bp | GCATTTGAAACCCATAGAGAATATATTGGCCTATCATaGACCCTACTTCTAGCACTGATCTGGTCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: AFETHREYIGLS*TLLLALIWSGC Trigger: ACATCCTGACCAGATCAGTGCTAGAAGTAGGGTTCATGATAGGCCAATATATTCTCTATGGGTTTCAAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056517.3 ENSMUST00000219644.2 |
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| CDS TCA 72 bp | ATATGTCTCATGTATGATGAAAGAAGAGTGAGGAGGTaGATCAACATGGCTGCTTTTACTTACCATCGATGC | + |
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Preference number: 6 (lower is better) Translates to: ICLMYDERRVRR*INMAAFTYHRC Trigger: GCATCGATGGTAAGTAAAAGCAGCCATGTTGATTCACCTCCTCACTCTTCTTTCATCATACATGAGACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056517.3 |
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