Pregenerated sensors for GIPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030406Ensembl transcript IDs: ENSMUST00000094790.5, ENSMUST00000206971.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGTTCCACGGGGTAGGGGCCTGGTCTCCAGTGTAGGGACCCAGTaGAGGCAGCAGCTGATCTCGGGTGAGGATGGCTGCTGCCCGCAG | + |
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Preference number: 1 (lower is better) Translates to: LVPRGRGLVSSVGTQ*RQQLISGEDGCCPQ Trigger: CTGCGGGCAGCAGCCATCCTCACCCGAGATCAGCTGCTGCCTCCACTGGGTCCCTACACTGGAGACCAGGCCCCTACCCCGTGGAACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR TCA 90 bp | TCCCACAGCCTAACACAGGCAAAGAGCCTCCCACCCCAGAGCCTTTaGACCTCTCTCCTTTGGTCATGGCAGTCTCCTTTGATCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: SHSLTQAKSLPPQSL*TSLLWSWQSPLILG Trigger: TCCCAGGATCAAAGGAGACTGCCATGACCAAAGGAGAGAGGTTCAAAGGCTCTGGGGTGGGAGGCTCTTTGCCTGTGTTAGGCTGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 90 bp | TTAACCTACATGGAGGCTGACAACCATCCAGTCCCAGGGGTCTTCTaGCCTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATC | + |
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Preference number: 1 (lower is better) Translates to: LTYMEADNHPVPGVF*PSSICRGCMPAVYI Trigger: GATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAAGACCCCTGGGACTGGATGGTTGTCAGCCTCCATGTAGGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 90 bp | TCTCTGTGGCCTCCGTTCTGGTCCAGCCACCTACATTCCTCTCACTaGGCTCCCAACTCACTGCCCCTAATAACGAACAGAGAACCATGG | + |
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Preference number: 1 (lower is better) Translates to: SLWPPFWSSHLHSSH*APNSLPLITNREPW Trigger: CCATGGTTCTCTGTTCGTTATTAGGGGCAGTGAGTTGGGAGCCCAGTGAGAGGAATGTAGGTGGCTGGACCAGAACGGAGGCCACAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR TCA 90 bp | CCCAGAGCCTTTGAACCTCTCTCCTTTGGTCATGGCAGTCTCCTTTaGTCCTGGGATCCCTCAACAAATCCTTCCCACCTCTCTGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: PRAFEPLSFGHGSLL*SWDPSTNPSHLSVA Trigger: GGCCACAGAGAGGTGGGAAGGATTTGTTGAGGGATCCCAGGATCAAAGGAGACTGCCATGACCAAAGGAGAGAGGTTCAAAGGCTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 90 bp | CCGGTTCCTTCGCCTCCATTTCCCCAGCATTGCTCCACTTGGGGCTaGTACACAGTAGGCTCTGAATACATGCTAACTGTACAGACACGG | + |
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Preference number: 1 (lower is better) Translates to: PVPSPPFPQHCSTWG*YTVGSEYMLTVQTR Trigger: CCGTGTCTGTACAGTTAGCATGTATTCAGAGCCTACTGTGTACCAGCCCCAAGTGGAGCAATGCTGGGGAAATGGAGGCGAAGGAACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR TCA 90 bp | CAGTGTGGTGTTCGTGGGGTTTTTGCGCCAACACATTGCTCCAGTTaGGCCTCACTCATCTACAGCAGACGACCTCACACACACCCTAGT | + |
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Preference number: 1 (lower is better) Translates to: QCGVRGVFAPTHCSS*ASLIYSRRPHTHPS Trigger: ACTAGGGTGTGTGTGAGGTCGTCTGCTGTAGATGAGTGAGGCTCAACTGGAGCAATGTGTTGGCGCAAAAACCCCACGAACACCACACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 90 bp | TGTTTTCCGGTTCCTTCGCCTCCATTTCCCCAGCATTGCTCCACTTaGGGCTGGTACACAGTAGGCTCTGAATACATGCTAACTGTACAG | + |
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Preference number: 1 (lower is better) Translates to: CFPVPSPPFPQHCST*GWYTVGSEYMLTVQ Trigger: CTGTACAGTTAGCATGTATTCAGAGCCTACTGTGTACCAGCCCCAAGTGGAGCAATGCTGGGGAAATGGAGGCGAAGGAACCGGAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 90 bp | CTCCATTCTTCCTGTTCCCAAGACCTTTTTGAATGCTGTTCCATCTaGCAGCAATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: LHSSCSQDLFECCSI*QQSCPPTLQEVSSH Trigger: GTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGATTGCTGGCAGATGGAACAGCATTCAAAAAGGTCTTGGGAACAGGAAGAATGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR TCA 90 bp | CGTACACGTAAAGTAAAAATAATCAAATCTTCAGTGAGCCTGGGATaGAATTCCAGTTTCTGCACCCCCTGCCCACTTCTTCCCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: RTRKVKIIKSSVSLG*NSSFCTPCPLLPIW Trigger: CCAGATGGGAAGAAGTGGGCAGGGGGTGCAGAAACTGGAATTTCATCCCAGGCTCACTGAAGATTTGATTATTTTTACTTTACGTGTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR TCA 90 bp | ACCTCACACACACAATTATTATATAAAGTCCTCTGTTCACAGTCCTaGGTTTCATCTCCCTGCCTCAAGGAACGAACTGGTTCCTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: TSHTQLLYKVLCSQS*VSSPCLKERTGSFQ Trigger: TTGGAAGGAACCAGTTCGTTCCTTGAGGCAGGGAGATGAAACTCAGGACTGTGAACAGAGGACTTTATATAATAATTGTGTGTGTGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTACCTGGTTCCACGGGGTAGGGGCCTGGTCTCCAGTGTAGGGACCCAGTGGGGTGAGGATGGCTGCTaGCCGCAGCATGAAAGACGT | + |
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Preference number: 2 (lower is better) Translates to: EYLVPRGRGLVSSVGTQWGEDGC*PQHERR Trigger: ACGTCTTTCATGCTGCGGGCAGCAGCCATCCTCACC...CCACTGGGTCCCTACACTGGAGACCAGGCCCCTACCCCGTGGAACCAGGTACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR CAA 90 bp | CTCCCACAGCCTAACACAGGCAAAGAGCCTCCCACCCCAGAGCCTTaGAACCTCTCTCCTTTGGTCATGGCAGTCTCCTTTGATCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPQPNTGKEPPTPEP*NLSPLVMAVSFDPG Trigger: CCCAGGATCAAAGGAGACTGCCATGACCAAAGGAGAGAGGTTCAAAGGCTCTGGGGTGGGAGGCTCTTTGCCTGTGTTAGGCTGTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACACACAGACCCTCGCTTTTTCCAGTaGAGCCACGGAAGCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LQAYAGAACLRCTSVHTDPRFFQ*SHGSLS Trigger: AGAAAGGCTTCCGTGGCTCCACTGGAAAAAGCGAGG...GTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CAA 90 bp | CATCTCCCTGCCTCAAGGAACGAACTGGTTCCTTCCAAATCCCTATaGGTTTCTTCCTCCCATCCTGTCCCCACGCTTTCACTGTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: HLPASRNELVPSKSL*VSSSHPVPTLSLSV Trigger: CACTGACAGTGAAAGCGTGGGGACAGGATGGGAGGAAGAAACCAATAGGGATTTGGAAGGAACCAGTTCGTTCCTTGAGGCAGGGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGTCTTCTGCCCTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACAGTACACAGTAGGCTCTaGATACATGCTAACTGTACA | + |
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Preference number: 2 (lower is better) Translates to: QGSSALQAYAGAACLRCTVHSRL*IHANCT Trigger: TGTACAGTTAGCATGTATTCAGAGCCTACTGTGTAC...TGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAAGACCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTTCTAGCCTGGCCTCCTCCCACTCCGTAAAGAAGCTTGATTTACTACAGCCATTTCCCCAGCATTaGTCCACTTGGGGCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SLSSLASSHSVKKLDLLQPFPQH*STWGWY Trigger: GTACCAGCCCCAAGTGGAGCAATGCTGGGGAAATGG...CTGTAGTAAATCAAGCTTCTTTACGGAGTGGGAGGAGGCCAGGCTAGAAAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGTCTTCTGCCCTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACACAAGACCTTTTTGAATaGTGTTCCATCTGCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: QGSSALQAYAGAACLRCTQDLFE*CSICQQ Trigger: TTGCTGGCAGATGGAACAGCATTCAAAAAGGTCTTG...TGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAAGACCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CCA 90 bp | AAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACACACAGACAAAACCACTTCTTCCCATCTaGAGGCCCTCGCTTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: KHMQGLHACGVHPYTQTKPLLPI*RPSLFP Trigger: TGGAAAAAGCGAGGGCCTCCAGATGGGAAGAAGTGG...TTTTGTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CAA 90 bp | AGAGAACCATGGAAAACAGCCCAGGAGACACTGCTGCTAAGAATCTaGGGGGTGGAGGGCTGGAGAGATGGAGTTCTGTTAACCTACATG | + |
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Preference number: 2 (lower is better) Translates to: REPWKTAQETLLLRI*GVEGWRDGVLLTYM Trigger: CATGTAGGTTAACAGAACTCCATCTCTCCAGCCCTCCACCCCCAAGATTCTTAGCAGCAGTGTCTCCTGGGCTGTTTTCCATGGTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCCCTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACATTCAAACATGACCCATaGCCTAAGCATCATGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: FCPSSICRGCMPAVYIRTFKHDP*PKHHVY Trigger: ATAGACATGATGCTTAGGTCATGGGTCATGTTTGAA...TGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTCTCCTTTGGTCATGGCAGTCTCCTTTGATCCTGGGATCCCTCAACAAAGAATGCTGTTCCATCTaGCAGCAATCTTGTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TSLLWSWQSPLILGSLNKECCSI*QQSCPP Trigger: TGGAGGACAAGATTGCTGGCAGATGGAACAGCATTC...TTTGTTGAGGGATCCCAGGATCAAAGGAGACTGCCATGACCAAAGGAGAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGTCACTTCTTTCAAACATGACCCATGACCTAAGCATCATGTCTATCCCATGCTCCACTTGGGGCTaGTACACAGTAGGCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LQSLLSNMTHDLSIMSIPCSTWG*YTVGSE Trigger: TTCAGAGCCTACTGTGTACCAGCCCCAAGTGGAGCA...TGGGATAGACATGATGCTTAGGTCATGGGTCATGTTTGAAAGAAGTGACTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTCATCTCCCTGCCTCAAGGAACGAACTGGTTCCTTCCAAATCCCTATTGAGGTACGGAAATAGATaGGAAACGTCTTGGTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: EFHLPASRNELVPSKSLLRYGNR*ETSWSH Trigger: GTGGGACCAAGACGTTTCCCATCTATTTCCGTACCT...CAATAGGGATTTGGAAGGAACCAGTTCGTTCCTTGAGGCAGGGAGATGAAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAATGCTGTTCCATCTGCCAGCAATCTTGTCCTCCAACTCTTCAAGAGGTCTACAAATATATACACGTaGGGACCTTGTTTTCCGGTT | + |
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Preference number: 2 (lower is better) Translates to: LNAVPSASNLVLQLFKRSTNIYT*GPCFPV Trigger: AACCGGAAAACAAGGTCCCCACGTGTATATATTTGT...AGACCTCTTGAAGAGTTGGAGGACAAGATTGCTGGCAGATGGAACAGCATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CCA 90 bp | GTGAACTTCACCCCAAGACCATCACCTCACACACACAATTATTATATAAAGTCCCTTCCAAATCCCTATTaGTTTCTTCCTCCCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: VNFTPRPSPHTHNYYIKSLPNPY*FLPPIL Trigger: CAGGATGGGAGGAAGAAACCAATAGGGATTTGGAAG...GGACTTTATATAATAATTGTGTGTGTGAGGTGATGGTCTTGGGGTGAAGTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR TCA 72 bp | GTGTGTCTGGGAGGCGGAAGGATCTGTCTACCTCACTaGCCCCAGGCCCTCTTGCTTGGCTGCCAGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: VCLGGGRICLPH*PQALLLGCQLS Trigger: TGAGAGCTGGCAGCCAAGCAAGAGGGCCTGGGGTCAGTGAGGTAGACAGATCCTTCCGCCTCCCAGACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTGGGAGGCGGAAGGATCTGTCTACCTCACTGACCCCAGGCCCTCTTGCTTGCTGCTGCTAAGAATCTaGGGGGTGGAGGGCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: VWEAEGSVYLTDPRPSCLLLLRI*GVEGWR Trigger: TCTCCAGCCCTCCACCCCCAAGATTCTTAGCAGCAG...CAAGCAAGAGGGCCTGGGGTCAGTGAGGTAGACAGATCCTTCCGCCTCCCAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 72 bp | ATGGAGGCTGACAACCATCCAGTCCCAGGGGTCTTCTaGCCTTCAAGCATATGCAGGGGCTGCATGCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: MEADNHPVPGVF*PSSICRGCMPA Trigger: CGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAAGACCCCTGGGACTGGATGGTTGTCAGCCTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTGGGAGGCGGAAGGATCTGTCTACCTCACTGACCCCAGGCCCTCTTGCTTGTCATGGCAGTCTCCTTaGATCCTGGGATCCCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: VWEAEGSVYLTDPRPSCLSWQSP*ILGSLN Trigger: GTTGAGGGATCCCAGGATCAAAGGAGACTGCCATGA...CAAGCAAGAGGGCCTGGGGTCAGTGAGGTAGACAGATCCTTCCGCCTCCCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 72 bp | CAGTGGAGGCAGCAGCTGATCTCGGGTGAGGATGGCTaGTGCCCGCAGCATGAAAGACGTGAACAGGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: QWRQQLISGEDG*CPQHERREQVH Trigger: ATGAACCTGTTCACGTCTTTCATGCTGCGGGCAGCAGCCATCCTCACCCGAGATCAGCTGCTGCCTCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR CCA 72 bp | CCTGGGATCCCTCAACAAATCCTTCCCACCTCTCTGTaGCCTCCGTTCTGGTCCAGCCACCTACATTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: PGIPQQILPTSL*PPFWSSHLHSS Trigger: AGAGGAATGTAGGTGGCTGGACCAGAACGGAGGCCACAGAGAGGTGGGAAGGATTTGTTGAGGGATCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR-3UTR CAA 90 bp | GAGCCTCACTCATCTACAGCAGACGACCTCACACACACCCTAGTCATCTCCCTTCCAGCATTGCTCCACTaGGGGCTGGTACACAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: EPHSSTADDLTHTLVISLPALLH*GLVHSR Trigger: CCTACTGTGTACCAGCCCCAAGTGGAGCAATGCTGG...AAGGGAGATGACTAGGGTGTGTGTGAGGTCGTCTGCTGTAGATGAGTGAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 72 bp | GAAGGATCTGTCTACCTCACTGACCCCAGGCCCTCTTaGTTGGCTGCCAGCTCTCACTCATATAGCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: EGSVYLTDPRPS*LAASSHSYSSV Trigger: CACAGAGCTATATGAGTGAGAGCTGGCAGCCAAGCAAGAGGGCCTGGGGTCAGTGAGGTAGACAGATCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 72 bp | GATGAGGAAAGGTACGGAAATAGATGGGAAACGTCTTaGTCCCACCGGGAAGGAGGCGGTGGAGTACCTGGT | + |
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Preference number: 3 (lower is better) Translates to: DEERYGNRWETS*SHREGGGGVPG Trigger: ACCAGGTACTCCACCGCCTCCTTCCCGGTGGGACCAAGACGTTTCCCATCTATTTCCGTACCTTTCCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR TCA 72 bp | GCATTGCTCCACTTGGGGCTGGTACACAGTAGGCTCTaGATACATGCTAACTGTACAGACACGGGGGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: ALLHLGLVHSRL*IHANCTDTGVP Trigger: AGGGACCCCCGTGTCTGTACAGTTAGCATGTATTCAGAGCCTACTGTGTACCAGCCCCAAGTGGAGCAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR TCA 72 bp | CTGGAGAGATGGAGTTCTGTTAACCTACATGGAGGCTaGCAACCATCCAGTCCCAGGGGTCTTCTGCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LERWSSVNLHGG*QPSSPRGLLPF Trigger: GAAGGGCAGAAGACCCCTGGGACTGGATGGTTGTCAGCCTCCATGTAGGTTAACAGAACTCCATCTCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 72 bp | GGGTCTTCTGCCCTTCAAGCATATGCAGGGGCTGCATaGCTGCGGTGTACATCCGTACACACAGACAAAACA | + |
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Preference number: 3 (lower is better) Translates to: GSSALQAYAGAA*LRCTSVHTDKT Trigger: TGTTTTGTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 72 bp | CACTTCTTCCCATCTGGAGGCCCTCGCTTTTTCCAGTaGAGCCACGGAAGCCTTTCTCCATTCTTCCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: HFFPSGGPRFFQ*SHGSLSPFFLF Trigger: GAACAGGAAGAATGGAGAAAGGCTTCCGTGGCTCCACTGGAAAAAGCGAGGGCCTCCAGATGGGAAGAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 72 bp | CTTCTGCCCTTCAAGCATATGCAGGGGCTGCATGCCTaGGGTGTACATCCGTACACACAGACAAAACAATCG | + |
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Preference number: 3 (lower is better) Translates to: LLPFKHMQGLHA*GVHPYTQTKQS Trigger: CGATTGTTTTGTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 72 bp | GTTCCTTCGCCTCCATTTCCCCAGCATTGCTCCACTTaGGGCTGGTACACAGTAGGCTCTGAATACATGCTA | + |
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Preference number: 3 (lower is better) Translates to: VPSPPFPQHCST*GWYTVGSEYML Trigger: TAGCATGTATTCAGAGCCTACTGTGTACCAGCCCCAAGTGGAGCAATGCTGGGGAAATGGAGGCGAAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 72 bp | TTCACTGTCAGTGATGAGGAAAGGTACGGAAATAGATaGGAAACGTCTTGGTCCCACCGGGAAGGAGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: FTVSDEERYGNR*ETSWSHREGGG Trigger: ACCGCCTCCTTCCCGGTGGGACCAAGACGTTTCCCATCTATTTCCGTACCTTTCCTCATCACTGACAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTTTCTAGCCTGGCCTCCTCCCACTCCGTAAAGAAGCTTGATTTACTACAGATCTTTCTGGGAACCTaGGGGAAAAATCCAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SLSSLASSHSVKKLDLLQIFLGT*GKNPAA Trigger: GGCTGCTGGATTTTTCCCCAAGGTTCCCAGAAAGAT...CTGTAGTAAATCAAGCTTCTTTACGGAGTGGGAGGAGGCCAGGCTAGAAAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR TCA 72 bp | TTTGAACCTCTCTCCTTTGGTCATGGCAGTCTCCTTTaGTCCTGGGATCCCTCAACAAATCCTTCCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: FEPLSFGHGSLL*SWDPSTNPSHL Trigger: GAGGTGGGAAGGATTTGTTGAGGGATCCCAGGATCAAAGGAGACTGCCATGACCAAAGGAGAGAGGTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR CCA 72 bp | GTCCTGAGTTTCATCTCCCTGCCTCAAGGAACGAACTaGTTCCTTCCAAATCCCTATTGGTTTCTTCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: VLSFISLPQGTN*FLPNPYWFLPP Trigger: GGGAGGAAGAAACCAATAGGGATTTGGAAGGAACCAGTTCGTTCCTTGAGGCAGGGAGATGAAACTCAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| 3UTR TCA 72 bp | ACTCCACCAGAAGCCAAAGTCTTAAATCGTGGAGTGTaGGTCAGCTATGAGACACATCTTTCTGGGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: TPPEAKVLNRGV*VSYETHLSGNL Trigger: AAGGTTCCCAGAAAGATGTGTCTCATAGCTGACTCACACTCCACGATTTAAGACTTTGGCTTCTGGTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR TCA 72 bp | AAGAGGTCTCCAGTCACTTCTTTCAAACATGACCCATaGCCTAAGCATCATGTCTATCCCAATTGCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: KRSPVTSFKHDP*PKHHVYPNCLP Trigger: TGGAAGGCAATTGGGATAGACATGATGCTTAGGTCATGGGTCATGTTTGAAAGAAGTGACTGGAGACCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| 3UTR GCA 72 bp | TTTCTCCATTCTTCCTGTTCCCAAGACCTTTTTGAATaGTGTTCCATCTGCCAGCAATCTTGTCCTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: FLHSSCSQDLFE*CSICQQSCPPT Trigger: AGTTGGAGGACAAGATTGCTGGCAGATGGAACAGCATTCAAAAAGGTCTTGGGAACAGGAAGAATGGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| 3UTR CCA 72 bp | CTTTTCATAAACGATTCCTCCACAAATATATACACGTaGGGACCTTGTTTTCCGGTTCCTTCGCCTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LFINDSSTNIYT*GPCFPVPSPPF Trigger: AAATGGAGGCGAAGGAACCGGAAAACAAGGTCCCCACGTGTATATATTTGTGGAGGAATCGTTTATGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| 3UTR TCA 72 bp | AAAGTAAAAATAATCAAATCTTCAGTGAGCCTGGGATaGAATTCCAGTTTCTGCACCCCCTGCCCACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KVKIIKSSVSLG*NSSFCTPCPLL Trigger: AAGAAGTGGGCAGGGGGTGCAGAAACTGGAATTTCATCCCAGGCTCACTGAAGATTTGATTATTTTTACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| 3UTR TCA 72 bp | ACACAATTATTATATAAAGTCCTCTGTTCACAGTCCTaGGTTTCATCTCCCTGCCTCAAGGAACGAACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TQLLYKVLCSQS*VSSPCLKERTG Trigger: ACCAGTTCGTTCCTTGAGGCAGGGAGATGAAACTCAGGACTGTGAACAGAGGACTTTATATAATAATTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGGACCCAGTGGAGGCAGCAGCTGATCTCGGGTGAGGATGGCTGCTGCCCGGTTACAGGCCAGGCCTaGGGGAGGTTCTGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTQWRQQLISGEDGCCPVTGQA*GRFCGL Trigger: GAGACCACAGAACCTCCCTCAGGCCTGGCCTGTAAC...CGGGCAGCAGCCATCCTCACCCGAGATCAGCTGCTGCCTCCACTGGGTCCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCAGCTGATCTCGGGTGAGGATGGCTGCTGCCCGCAGCATGAAAGACGTAAGCCTGCAGACACCTaGCGGAACCAGGGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RQQLISGEDGCCPQHERRKPADT*RNQGRY Trigger: GTATCTGCCCTGGTTCCGTCAGGTGTCTGCAGGCTT...ACGTCTTTCATGCTGCGGGCAGCAGCCATCCTCACCCGAGATCAGCTGCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCCTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACACGATCACCCAGGGAATaGCGAAAAGCGCGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FCPSSICRGCMPAVYIRTRSPRE*RKARGP Trigger: GGGCCCCCGCGCTTTTCGTCATTCCCTGGGTGATCG...TGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCCTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACAGCTGCTCTTGAAGACTaGGACGCAGGCGGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCPSSICRGCMPAVYIRTAALED*DAGGGG Trigger: GCCACCGCCGCCTGCGTCTCAGTCTTCAAGAGCAGC...TGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGGTACGGAAATAGATGGGAAACGTCTTGGTCCCACCGGGAAGGAGGCGGTGGTACAGCTCCCCCGTaGTGGTCTGCCCCTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERYGNRWETSWSHREGGGGTAPP*WSAPQS Trigger: ACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACC...ACCGCCTCCTTCCCGGTGGGACCAAGACGTTTCCCATCTATTTCCGTACCTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGCCTAACACAGGCAAAGAGCCTCCCACCCCAGAGCCTTTGAACCTCTCTTCGGGGCAGCGCATCTaGCGTGTCCTCAGCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQPNTGKEPPTPEPLNLSSGQRI*RVLSFE Trigger: TTCAAAGCTGAGGACACGGCAGATGCGCTGCCCCGA...AGAGAGGTTCAAAGGCTCTGGGGTGGGAGGCTCTTTGCCTGTGTTAGGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | TCTACCTCACTGACCCCAGGCCCTCTTGCTTGGCTGCCAGCTCTCACTCATATAGCACCAGTGTCAGCGTaGAGCGAGCCAGCCTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STSLTPGPLAWLPALTHIAPVSA*SEPALV Trigger: GACTAAGGCTGGCTCGCTCCACGCTGACACTGGTGC...TATATGAGTGAGAGCTGGCAGCCAAGCAAGAGGGCCTGGGGTCAGTGAGGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACACACAGACAAGCCTGCAGACACCTaGCGGAACCAGGGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LQAYAGAACLRCTSVHTDKPADT*RNQGRY Trigger: GTATCTGCCCTGGTTCCGTCAGGTGTCTGCAGGCTT...GTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | AAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACACACAGACAAAAGGTACAGCTCCCCCGTaGTGGTCTGCCCCTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHMQGLHACGVHPYTQTKGTAPP*WSAPQS Trigger: ACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACC...TTTTGTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCCTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACAAGTGTAGGGACCCAGTaGAGGCAGCAGCTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FCPSSICRGCMPAVYIRTSVGTQ*RQQLIS Trigger: CGAGATCAGCTGCTGCCTCCACTGGGTCCCTACACT...TGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAGGGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACACACAGACTATTGGGTCATGATCTaGGCCGTGCGGCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQAYAGAACLRCTSVHTDYWVMI*AVRQAA Trigger: AGCTGCCTGCCGCACGGCCCAGATCATGACCCAATA...GTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | TCATCTCCCTGCCTCAAGGAACGAACTGGTTCCTTCCAAATCCCTATTGGTTTCACAGCTCCCCCGTGGTaGTCTGCCCCTCAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPCLKERTGSFQIPIGFTAPPW*SAPQSL Trigger: CAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGT...GAAACCAATAGGGATTTGGAAGGAACCAGTTCGTTCCTTGAGGCAGGGAGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS-3UTR CCA 90 bp | TCTACCTCACTGACCCCAGGCCCTCTTGCTTGGCTGCCAGCTCTCACTCATATATTTCAAAGGCCAGTTTaGCGAAGCGCAGGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: STSLTPGPLAWLPALTHIFQRPV*RSAGSL Trigger: AAGGCTCCCTGCGCTTCGCCAAACTGGCCTTTGAAA...TATATGAGTGAGAGCTGGCAGCCAAGCAAGAGGGCCTGGGGTCAGTGAGGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | ATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCCGGTGGCGCCAACCCTaGCGGATCTCCGACTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILSSNSSRGLQSLLSNMTRWRQP*RISDCT Trigger: GGTGCAGTCGGAGATCCGCCAGGGTTGGCGCCACCG...GGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR GCA 90 bp | TCCCTTTCTAGCCTGGCCTCCTCCCACTCCGTAAAGAAGCTTGATTTACTACAGGGTGAGGATGGCTGCTaGCCGCAGCATGAAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSLASSHSVKKLDLLQGEDGC*PQHERR Trigger: ACGTCTTTCATGCTGCGGGCAGCAGCCATCCTCACC...CTGTAGTAAATCAAGCTTCTTTACGGAGTGGGAGGAGGCCAGGCTAGAAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| 3UTR CAA 72 bp | TGTTCGTGGGGTTTTTGCGCCAACACATTGCTCCAGTaGAGCCTCACTCATCTACAGCAGACGACCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CSWGFCANTLLQ*SLTHLQQTTSH Trigger: GTGTGAGGTCGTCTGCTGTAGATGAGTGAGGCTCAACTGGAGCAATGTGTTGGCGCAAAAACCCCACGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTCACTTCTTTCAAACATGACCCATGACCTAAGCATCATGTCTATCCCAACAGCTCCCCCGTGGTaGTCTGCCCCTCAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQSLLSNMTHDLSIMSIPTAPPW*SAPQSL Trigger: CAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGT...TGGGATAGACATGATGCTTAGGTCATGGGTCATGTTTGAAAGAAGTGACTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | ACCTCTCTCCTTTGGTCATGGCAGTCTCCTTTGATCCTGGGATCCCTCAACAAACCATCACTGCCACACTaGCGGAAGACAAAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLLWSWQSPLILGSLNKPSLPH*RKTKPA Trigger: TGCAGGCTTTGTCTTCCGCCAGTGTGGCAGTGATGG...TTTGTTGAGGGATCCCAGGATCAAAGGAGACTGCCATGACCAAAGGAGAGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | ATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCGCAAACACCACCTCGTaGACACCCAGCAGGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILSSNSSRGLQSLLSNMTANTTS*TPSRGT Trigger: GGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGC...GGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR TCA 90 bp | ATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCGTTACAGGCCAGGCCTaGGGGAGGTTCTGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILSSNSSRGLQSLLSNMTVTGQA*GRFCGL Trigger: GAGACCACAGAACCTCCCTCAGGCCTGGCCTGTAAC...GGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCCATGACCTAAGCATCAGTGGAGGCAGCAGCTaGTCTCGGGTGAGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRGLQSLLSNMTHDLSISGGSS*SRVRMA Trigger: AGCCATCCTCACCCGAGATCAGCTGCTGCCTCCACT...GATGCTTAGGTCATGGGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| 3UTR CAA 72 bp | GCCTCAAGGAACGAACTGGTTCCTTCCAAATCCCTATaGGTTTCTTCCTCCCATCCTGTCCCCACGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASRNELVPSKSL*VSSSHPVPTLS Trigger: TGAAAGCGTGGGGACAGGATGGGAGGAAGAAACCAATAGGGATTTGGAAGGAACCAGTTCGTTCCTTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGTCACTTCTTTCAAACATGACCCATGACCTAAGCATCATGTCTATCCCACACAATATTGGGTCATaGTCTGGGCCGTGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSLLSNMTHDLSIMSIPHNIGS*SGPCGR Trigger: CCTGCCGCACGGCCCAGATCATGACCCAATATTGTG...TGGGATAGACATGATGCTTAGGTCATGGGTCATGTTTGAAAGAAGTGACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR TCA 90 bp | ATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCTCCACCAAATGGCTTTaGCTTCGTTGCGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSSNSSRGLQSLLSNMTSTKWL*LRCAPS Trigger: GCTGGGAGCGCAACGAAGTCAAAGCCATTTGGTGGA...GGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR TCA 90 bp | TTGAATGCTGTTCCATCTGCCAGCAATCTTGTCCTCCAACTCTTCAAGAGGTCTCCGTGTCCTCAGCTTTaGAACAAGGATGCCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNAVPSASNLVLQLFKRSPCPQL*NKDAKD Trigger: ATCCTTGGCATCCTTGTTTCAAAGCTGAGGACACGG...AGACCTCTTGAAGAGTTGGAGGACAAGATTGCTGGCAGATGGAACAGCATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCCATGACCTAAGCATCGCTCCCACACAATATTaGGTCATGATCTGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRGLQSLLSNMTHDLSIAPTQY*VMIWAV Trigger: CACGGCCCAGATCATGACCCAATATTGTGTGGGAGC...GATGCTTAGGTCATGGGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| 3UTR CAA 72 bp | TGTGAGTCAGCTATGAGACACATCTTTCTGGGAACCTaGGGGAAAAATCCAGCAGCCGCTACTAATAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CESAMRHIFLGT*GKNPAAATNKG Trigger: TCCTTTATTAGTAGCGGCTGCTGGATTTTTCCCCAAGGTTCCCAGAAAGATGTGTCTCATAGCTGACTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CCA 90 bp | ATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCCTCACCAGGAAACCCTaGAAGGAACTTAGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ILSSNSSRGLQSLLSNMTLTRKP*KELRKI Trigger: AATCTTCCTAAGTTCCTTCCAGGGTTTCCTGGTGAG...GGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| 3UTR CAA 72 bp | GACCTAAGCATCATGTCTATCCCAATTGCCTTCCAGTaGATTGTCCTAGACACCTCAATTCTTTTCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLSIMSIPIAFQ*IVLDTSILFIN Trigger: GTTTATGAAAAGAATTGAGGTGTCTAGGACAATCAACTGGAAGGCAATTGGGATAGACATGATGCTTAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS CCA 90 bp | GGCACTCCTGGCCGTAGTGCTCCCAGCGCTGGTACAGCTCCCCCGTaGTGGTCTGCCCCTCAGAGTCTGTCTCCGCCCACTGGAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTPGRSAPSAGTAPP*WSAPQSLSPPTGVP Trigger: GGGGACTCCAGTGGGCGGAGACAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACCAGCGCTGGGAGCACTACGGCCAGGAGTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS CCA 90 bp | CAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGTGTCAGCGTaGAGCGAGCCAGCCTTAGTCGGTAGTCGGGGCAGCGCATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTPPRGHPAGAPVSA*SEPALVGSRGSASA Trigger: GGCAGATGCGCTGCCCCGACTACCGACTAAGGCTGGCTCGCTCCACGCTGACACTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS TCA 90 bp | CCACCAGTAGCCAGGTGTAATTGGCTCCCACACAATATTGGGTCATaGTCTGGGCCGTGCGGCAGGCAGCTAGGGCCTGGTTCCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPVARCNWLPHNIGS*SGPCGRQLGPGSTG Trigger: CCCCGTGGAACCAGGCCCTAGCTGCCTGCCGCACGGCCCAGATCATGACCCAATATTGTGTGGGAGCCAATTACACCTGGCTACTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS CCA 90 bp | GGCACTCCTGGCCGTAGTGCTCCCAGCGCTGGTACAGCTCCCCCGTaGTGGTCTGCCCCTCAGAGTCTGTCTAAGAGAAGAAAGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTPGRSAPSAGTAPP*WSAPQSLSKRRKKG Trigger: TCCCTTCTTTCTTCTCTTAGACAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACCAGCGCTGGGAGCACTACGGCCAGGAGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS GCA 90 bp | AGATCCCCACTGGCCATCACTGCCACACTGGCGGAAGACAAAGCCTaGAGACACCTGACGGAACCAGGGCAGATACCAGGGGCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RSPLAITATLAEDKA*RHLTEPGQIPGARH Trigger: GTGTCTTGCCCCTGGTATCTGCCCTGGTTCCGTCAGGTGTCTGCAGGCTTTGTCTTCCGCCAGTGTGGCAGTGATGGCCAGTGGGGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094790.5 ENSMUST00000206971.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGAGGCGGAAGGATCTGTCTACCTCACTGACCCCAGGCCCTCTTGCTTGATTTCAAAGGCCAGTTaGGCGAAGCGCAGGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VWEAEGSVYLTDPRPSCLISKAS*AKRREP Trigger: AGGCTCCCTGCGCTTCGCCAAACTGGCCTTTGAAAT...CAAGCAAGAGGGCCTGGGGTCAGTGAGGTAGACAGATCCTTCCGCCTCCCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CAA 90 bp | ATAGCTCTGTGTCCTGCTGCTCGGCTTCTCCCACAGCCTAACACAGGCAAAGAGACGTGGACGCTGCTCTaGAAGACTGAGACGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IALCPAARLLPQPNTGKETWTLL*KTETQA Trigger: CGCCTGCGTCTCAGTCTTCAAGAGCAGCGTCCACGT...CTCTTTGCCTGTGTTAGGCTGTGGGAGAAGCCGAGCAGCAGGACACAGAGCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS CCA 90 bp | ACATATCGAAGGAACCGTTACAGGCCAGGCCTGAGGGAGGTTCTGTaGTCTCCAACATCTTTTGGCACTCCTGGCCGTAGTGCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TYRRNRYRPGLREVL*SPTSFGTPGRSAPS Trigger: GCTGGGAGCACTACGGCCAGGAGTGCCAAAAGATGTTGGAGACCACAGAACCTCCCTCAGGCCTGGCCTGTAACGGTTCCTTCGATATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094790.5 ENSMUST00000206971.2 |
||
| CDS TCA 90 bp | GTTCCAGCAGGCATACATATCGAAGGAACCGTTACAGGCCAGGCCTaGGGGAGGTTCTGTGGTCTCCAACATCTTTTGGCACTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPAGIHIEGTVTGQA*GRFCGLQHLLALLA Trigger: GGCCAGGAGTGCCAAAAGATGTTGGAGACCACAGAACCTCCCTCAGGCCTGGCCTGTAACGGTTCCTTCGATATGTATGCCTGCTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094790.5 ENSMUST00000206971.2 |
||
| CDS CCA 90 bp | CCAGGAAACCCTGGAAGGAACTTAGGAAGATTTCAAAGGCCAGTTTaGCGAAGCGCAGGGAGCCTTCAACCTGTTCCTCCGTCACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGNPGRNLGRFQRPV*RSAGSLQPVPPSQA Trigger: CGCCTGTGACGGAGGAACAGGTTGAAGGCTCCCTGCGCTTCGCCAAACTGGCCTTTGAAATCTTCCTAAGTTCCTTCCAGGGTTTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGGTACGGAAATAGATGGGAAACGTCTTGGTCCCACCGGGAAGGAGGCGGTGGTCTCCAACATCTTTaGGCACTCCTGGCCGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERYGNRWETSWSHREGGGGLQHL*ALLAVV Trigger: CACTACGGCCAGGAGTGCCAAAAGATGTTGGAGACC...ACCGCCTCCTTCCCGGTGGGACCAAGACGTTTCCCATCTATTTCCGTACCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGCATATGCAGGGGCTGCATGCCTGCGGTGTACATCCGTACACACAGACGGCTCCCACACAATATaGGGTCATGATCTGGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LQAYAGAACLRCTSVHTDGSHTI*GHDLGR Trigger: ACGGCCCAGATCATGACCCAATATTGTGTGGGAGCC...GTCTGTGTGTACGGATGTACACCGCAGGCATGCAGCCCCTGCATATGCTTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CAA 90 bp | CATTGCTCCACTTGGGGCTGGTACACAGTAGGCTCTGAATACATGCTAACTGTAATGGCTTTGACTTCGTaGCGCTCCCAGCACTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HCSTWGWYTVGSEYMLTVMALTS*RSQHCV Trigger: CACACAGTGCTGGGAGCGCAACGAAGTCAAAGCCAT...TACAGTTAGCATGTATTCAGAGCCTACTGTGTACCAGCCCCAAGTGGAGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
||
| CDS-3UTR CAA 90 bp | TTGAATGCTGTTCCATCTGCCAGCAATCTTGTCCTCCAACTCTTCAAGAGGTCTGGTCTCCAACATCTTTaGGCACTCCTGGCCGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: LNAVPSASNLVLQLFKRSGLQHL*ALLAVV Trigger: CACTACGGCCAGGAGTGCCAAAAGATGTTGGAGACC...AGACCTCTTGAAGAGTTGGAGGACAAGATTGCTGGCAGATGGAACAGCATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS-3UTR CAA 90 bp | ATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCATCCACCAAATGGCTTaGACTTCGTTGCGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ILSSNSSRGLQSLLSNMTIHQMA*TSLRSQ Trigger: CTGGGAGCGCAACGAAGTCAAAGCCATTTGGTGGAT...GGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS-3UTR CAA 90 bp | ATCTTGTCCTCCAACTCTTCAAGAGGTCTCCAGTCACTTCTTTCAAACATGACCGCCGTGTCCTCAGCTTaGAAACAAGGATGCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: ILSSNSSRGLQSLLSNMTAVSSA*KQGCQG Trigger: TCCTTGGCATCCTTGTTTCAAAGCTGAGGACACGGC...GGTCATGTTTGAAAGAAGTGACTGGAGACCTCTTGAAGAGTTGGAGGACAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS TCA 72 bp | GTTCCTGGTGCGGACGTGGACGCTGCTCTTGAAGACTaGGACGCAGGCGGCGGTGGCGCCAACCCTGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: VPGADVDAALED*DAGGGGANPGG Trigger: TCCGCCAGGGTTGGCGCCACCGCCGCCTGCGTCTCAGTCTTCAAGAGCAGCGTCCACGTCCGCACCAGGAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS GCA 72 bp | TGCTCCCAGCGCTGGTACAGCTCCCCCGTGGTGGTCTaGCCCTCAGAGTCTGTCTCCGCCCACTGGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CSQRWYSSPVVV*PSESVSAHWSP Trigger: GGGACTCCAGTGGGCGGAGACAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACCAGCGCTGGGAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CCA 72 bp | CGTAGTGCTCCCAGCGCTGGTACAGCTCCCCCGTGGTaGTCTGCCCCTCAGAGTCTGTCTCCGCCCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: RSAPSAGTAPPW*SAPQSLSPPTG Trigger: TCCAGTGGGCGGAGACAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACCAGCGCTGGGAGCACTACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS GCA 72 bp | CCCCAGGCACATGCAGCATCCCAGAGGGCAAGGCGTTaGCAACGGCAGCTTCTCGGCACGCAGAGCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PQAHAASQRARR*QRQLLGTQSSK Trigger: CTTTGAGCTCTGCGTGCCGAGAAGCTGCCGTTGGCAACGCCTTGCCCTCTGGGATGCTGCATGTGCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CCA 72 bp | GGCCGTAGTGCTCCCAGCGCTGGTACAGCTCCCCCGTaGTGGTCTGCCCCTCAGAGTCTGTCTAAGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GRSAPSAGTAPP*WSAPQSLSKRR Trigger: TCTTCTCTTAGACAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACCAGCGCTGGGAGCACTACGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| CDS CAA 72 bp | TCCCCAGGCACATGCAGCATCCCAGAGGGCAAGGCGTaGCCAACGGCAGCTTCTCGGCACGCAGAGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SPGTCSIPEGKA*PTAASRHAELK Trigger: TTTGAGCTCTGCGTGCCGAGAAGCTGCCGTTGGCAACGCCTTGCCCTCTGGGATGCTGCATGTGCCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS TCA 72 bp | CTGCCACACTGGCGGAAGACAAAGCCTGCAGACACCTaGCGGAACCAGGGCAGATACCAGGGGCAAGACACC | + |
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Preference number: 6 (lower is better) Translates to: LPHWRKTKPADT*RNQGRYQGQDT Trigger: GGTGTCTTGCCCCTGGTATCTGCCCTGGTTCCGTCAGGTGTCTGCAGGCTTTGTCTTCCGCCAGTGTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094790.5 ENSMUST00000206971.2 |
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| CDS GCA 72 bp | CTGGCCATCACTGCCACACTGGCGGAAGACAAAGCCTaGAGACACCTGACGGAACCAGGGCAGATACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LAITATLAEDKA*RHLTEPGQIPG Trigger: CCCTGGTATCTGCCCTGGTTCCGTCAGGTGTCTGCAGGCTTTGTCTTCCGCCAGTGTGGCAGTGATGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094790.5 ENSMUST00000206971.2 |
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| CDS TCA 72 bp | GCCAGGTGTAATTGGCTCCCACACAATATTGGGTCATaGTCTGGGCCGTGCGGCAGGCAGCTAGGGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: ARCNWLPHNIGS*SGPCGRQLGPG Trigger: ACCAGGCCCTAGCTGCCTGCCGCACGGCCCAGATCATGACCCAATATTGTGTGGGAGCCAATTACACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CCA 72 bp | CGTAGTGCTCCCAGCGCTGGTACAGCTCCCCCGTGGTaGTCTGCCCCTCAGAGTCTGTCTAAGAGAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RSAPSAGTAPPW*SAPQSLSKRRK Trigger: CTTTCTTCTCTTAGACAGACTCTGAGGGGCAGACCACCACGGGGGAGCTGTACCAGCGCTGGGAGCACTACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206971.2 |
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| CDS TCA 72 bp | GCCAAGAAGCAGGTAGCAGCGGAAGTGGCCCTTTTCTaGGCGTCCCACGATCACCAGCAGATGGTGCAGATA | + |
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Preference number: 6 (lower is better) Translates to: AKKQVAAEVALF*ASHDHQQMVQI Trigger: TATCTGCACCATCTGCTGGTGATCGTGGGACGCTCAGAAAAGGGCCACTTCCGCTGCTACCTGCTTCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CAA 72 bp | GGAGTGCGAATGATCCACCAAATGGCTTTGACTTCGTaGCGCTCCCAGCACTGTGTGTTCTCGCGCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GVRMIHQMALTS*RSQHCVFSRRY Trigger: GTACCTGCGCGAGAACACACAGTGCTGGGAGCGCAACGAAGTCAAAGCCATTTGGTGGATCATTCGCACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CAA 90 bp | ACCAGGAAACCCTGGAAGGAACTTAGGAAGATTTCAAAGGCCAGTTaGGCGAAGCGCAGGGAGCCTTCAACCTGTTCCTCCGTCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: TRKPWKELRKISKAS*AKRREPSTCSSVTG Trigger: GCCTGTGACGGAGGAACAGGTTGAAGGCTCCCTGCGCTTCGCCAAACTGGCCTTTGAAATCTTCCTAAGTTCCTTCCAGGGTTTCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CAA 72 bp | CCCTGGAAGGAACTTAGGAAGATTTCAAAGGCCAGTTaGGCGAAGCGCAGGGAGCCTTCAACCTGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PWKELRKISKAS*AKRREPSTCSS Trigger: GGAGGAACAGGTTGAAGGCTCCCTGCGCTTCGCCAAACTGGCCTTTGAAATCTTCCTAAGTTCCTTCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CAA 90 bp | AAGATGGTTATTAGGATGGGAGTGCGAATGATCCACCAAATGGCTTaGACTTCGTTGCGCTCCCAGCACTGTGTGTTCTCGCGCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: KMVIRMGVRMIHQMA*TSLRSQHCVFSRRY Trigger: GTACCTGCGCGAGAACACACAGTGCTGGGAGCGCAACGAAGTCAAAGCCATTTGGTGGATCATTCGCACTCCCATCCTAATAACCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CAA 72 bp | ATTAGGATGGGAGTGCGAATGATCCACCAAATGGCTTaGACTTCGTTGCGCTCCCAGCACTGTGTGTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: IRMGVRMIHQMA*TSLRSQHCVFS Trigger: CGAGAACACACAGTGCTGGGAGCGCAACGAAGTCAAAGCCATTTGGTGGATCATTCGCACTCCCATCCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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| CDS CAA 90 bp | AGCTTTGAAACAAGGATGCCAAGGATGCGGATGAAGATGAGGAAATaGATCAAGATGGTTATTAGGATGGGAGTGCGAATGATCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: SFETRMPRMRMKMRK*IKMVIRMGVRMIHQ Trigger: TTGGTGGATCATTCGCACTCCCATCCTAATAACCATCTTGATCAATTTCCTCATCTTCATCCGCATCCTTGGCATCCTTGTTTCAAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094790.5 |
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