Pregenerated sensors for GIPC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039131Ensembl transcript IDs: ENSMUST00000046614.10
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGTATTTTATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGCCGGAGAAGGCTGCCTaGAGAACTGTGGTCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: SILCGKSRGYKQGPKSPMPEKAA*RTVVIS Trigger: AGAGATGACCACAGTTCTGCAGGCAGCCTTCTCCGG...CATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATAAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| 3UTR-3UTR GCA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTAACTGTGGTCATCTCTaGAGGAACACGGGCCACGCC | + |
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Preference number: 2 (lower is better) Translates to: SSINQNYISKTVSHTQEANCGHL*RNTGHA Trigger: GGCGTGGCCCGTGTTCCTGCAGAGATGACCACAGTT...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| 3UTR-3UTR CCA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTCTGCCTGCAGAACTGTaGTCATCTCTGCAGGAACAC | + |
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Preference number: 2 (lower is better) Translates to: SSINQNYISKTVSHTQEALPAEL*SSLQEH Trigger: GTGTTCCTGCAGAGATGACCACAGTTCTGCAGGCAG...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| 3UTR GCA 72 bp | TTCATAACAGTGTCTAAGACCCCGGAGAAGGCTGCCTaGAGAACTGTGGTCATCTCTGCAGGAACACGGGCC | + |
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Preference number: 3 (lower is better) Translates to: FITVSKTPEKAA*RTVVISAGTRA Trigger: GGCCCGTGTTCCTGCAGAGATGACCACAGTTCTGCAGGCAGCCTTCTCCGGGGTCTTAGACACTGTTATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | TATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGCTCGGCCCGTGGCGCTaGCGTGCGCCAGCTGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: YVERAVGTNRDQNHLCRKLGPWR*RAPAVR Trigger: ACGCACAGCTGGCGCACGGCAGCGCCACGGGCCGAG...CTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CCA 90 bp | TATTTTATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTACCTCCACTCGGCCCGTaGCGCTGCCGTGCGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: YFMWKEPWVQTGTKITYVPPLGP*RCRAPA Trigger: AGCTGGCGCACGGCAGCGCCACGGGCCGAGTGGAGG...TACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATAAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | GAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGATTCCTCGGGGACACCCTGGCTaGCACTGGATCTCTCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ERAVGTNRDQNHLCRKIPRGHPG*HWISRP Trigger: AGGGCGAGAGATCCAGTGGCAGCCAGGGTGTCCCCG...AGGAATCTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CCA 90 bp | ATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGAGGTCCGGGGACACCCTaGCTGCCACTGGATCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: MWKEPWVQTGTKITYVERGPGTP*LPLDLS Trigger: CGAGAGATCCAGTGGCAGCCAGGGTGTCCCCGGACC...TCTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CCA 90 bp | GAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGATTCCTCGGCCTCCTTGGACTTaGCCGCCTTCTTCTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: ERAVGTNRDQNHLCRKIPRPPWT*PPSSSR Trigger: GCGGGAAGAAGAAGGCGGCCAAGTCCAAGGAGGCCG...AGGAATCTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR TCA 90 bp | AGTATTTTATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTGGCGTAGAGCTCGCTaGTGCTGGAGAAGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SILCGKSRGYKQGPKSPMWRRAR*CWRSPP Trigger: TGGAGGACTTCTCCAGCATCAGCGAGCTCTACGCCA...CATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATAAAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTGAACACCAGCTTGCGTaGCGGAGCTGGGGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SSINQNYISKTVSHTQEAEHQLA*RSWGSG Trigger: CCCGGACCCCCAGCTCCGGCACGCAAGCTGGTGTTC...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTGCCGTGCGCCAGCTGTaGGTGGAACACCAGCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: SSINQNYISKTVSHTQEAAVRQL*VEHQLA Trigger: CGCAAGCTGGTGTTCCACGCACAGCTGGCGCACGGC...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | ATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGACTTTCCGATTGCCTTTaGCTTGGCTTCAGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: MWKEPWVQTGTKITYVERLSDCL*LGFRGQ Trigger: CTGCCCTCTGAAGCCAAGGCAAAGGCAATCGGAAAG...TCTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | ATCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTCCTCAAGGCCCAGCTaGCCACCCAGGAGCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: IIHKSKLHFEDCISYTGGSSRPS*PPRSFP Trigger: GGGAAAGCTCCTGGGTGGGCAGCTGGGCCTTGAGGA...GCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CCA 90 bp | ATCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTGCGCCAGCTGTGCGTaGAACACCAGCTTGCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: IIHKSKLHFEDCISYTGGCASCA*NTSLRA Trigger: GGCACGCAAGCTGGTGTTCCACGCACAGCTGGCGCA...GCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR TCA 90 bp | TATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGACAGATCGTTTTAACTaGGTCAATGGTGCTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: YVERAVGTNRDQNHLCRKTDRFN*VNGAAI Trigger: GATGGCAGCACCATTGACTCAGTTAAAACGATCTGT...CTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CCA 90 bp | AGTATTTTATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTCCGGCTTTCGACCTTaGTCCTATTTCAAAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SILCGKSRGYKQGPKSPMSGFRP*SYFKSL Trigger: AAGGCTTTTGAAATAGGACCAAGGTCGAAAGCCGGA...CATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATAAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR TCA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTCTTGTTTCATGTCACTaGTGGCTCCCCACACGTCGA | + |
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Preference number: 4 (lower is better) Translates to: SSINQNYISKTVSHTQEALVSCH*WLPTRR Trigger: TCGACGTGTGGGGAGCCATCAGTGACATGAAACAAG...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | TATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGTTGGGTTCTATTAACTaGAAAGTAAAGAGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: YVERAVGTNRDQNHLCRKLGSIN*KVKSSS Trigger: GGAGGAGCTCTTTACTTTGCAGTTAATAGAACCCAA...CTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR GCA 90 bp | TATTTTATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAATCAACCTTTCCGATTaGCTTTGCCTTGGCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: YFMWKEPWVQTGTKITYVINLSD*LCLGFR Trigger: TCTGAAGCCAAGGCAAAGGCAATCGGAAAGGTTGAT...TACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CCA 90 bp | AGTATTTTATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTTTCAAAAGCCTTCTTaGGTTCTATTAACTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SILCGKSRGYKQGPKSPMFQKPS*VLLTAK Trigger: CTTTGCAGTTAATAGAACCCAAGAAGGCTTTTGAAA...CATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATAAAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR TCA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTTTAGCGACTTCAAAGTaGCGCCACCCAACAATATTT | + |
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Preference number: 4 (lower is better) Translates to: SSINQNYISKTVSHTQEALATSK*RHPTIF Trigger: AAATATTGTTGGGTGGCGTCACTTTGAAGTCGCTAA...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CCA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTTTTGTGCCTTTCACGTaGGCAAATATGAAATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SSINQNYISKTVSHTQEAFVPFT*ANMKSS Trigger: TGAGGATTTCATATTTGCCCACGTGAAAGGCACAAA...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR TCA 90 bp | ATCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTCCAAGCGAATCCTCTaGTTTATAAACATTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: IIHKSKLHFEDCISYTGGSKRIL*FINIHF Trigger: GAAGTGAATGTTTATAAATCAGAGGATTCGCTTGGA...GCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 90 bp | ACACCAGCTTGCGTGCCGGAGCTGGGGGTCCGGGGACACCCTGGCTaGCACTGGATCTCTCGCCCTCCACCAGCCTCGCGGCCTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TPACVPELGVRGHPG*HWISRPPPASRPPW Trigger: CCAAGGAGGCCGCGAGGCTGGTGGAGGGCGAGAGATCCAGTGGCAGCCAGGGTGTCCCCGGACCCCCAGCTCCGGCACGCAAGCTGGTGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS CCA 90 bp | GCTTGCGTGCCGGAGCTGGGGGTCCGGGGACACCCTGGCTGCCACTaGATCTCTCGCCCTCCACCAGCCTCGCGGCCTCCTTGGACTTGG | + |
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Preference number: 5 (lower is better) Translates to: ACVPELGVRGHPGCH*ISRPPPASRPPWTW Trigger: CCAAGTCCAAGGAGGCCGCGAGGCTGGTGGAGGGCGAGAGATCCAGTGGCAGCCAGGGTGTCCCCGGACCCCCAGCTCCGGCACGCAAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 90 bp | TCGCTGATGCTGGAGAAGTCCTCCACTCGGCCCGTGGCGCTGCCGTaGGCCAGCTGTGCGTGGAACACCAGCTTGCGTGCCGGAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SLMLEKSSTRPVALP*ASCAWNTSLRAGAG Trigger: CCCAGCTCCGGCACGCAAGCTGGTGTTCCACGCACAGCTGGCGCACGGCAGCGCCACGGGCCGAGTGGAGGACTTCTCCAGCATCAGCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 90 bp | TCGAATCCCCATGTACAGCTCAAGGAGATCATCAACCTTTCCGATTaGCTTTGCCTTGGCTTCAGAGGGCAGCTCTTCTACTGTAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SNPHVQLKEIINLSD*LCLGFRGQLFYCSG Trigger: CCCGCTACAGTAGAAGAGCTGCCCTCTGAAGCCAAGGCAAAGGCAATCGGAAAGGTTGATGATCTCCTTGAGCTGTACATGGGGATTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CAA 90 bp | TATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGTTCCGGCTTTCGACCTaGGTCCTATTTCAAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: YVERAVGTNRDQNHLCRKFRLST*VLFQKP Trigger: AGGCTTTTGAAATAGGACCAAGGTCGAAAGCCGGAA...CTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CAA 90 bp | GAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTAGAAAGATTCCTTCATCTGGGTTGCTCTaGTCTTTCCCAGCTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: ERAVGTNRDQNHLCRKIPSSGLL*SFPASN Trigger: GTTTGAAGCTGGGAAAGACAAGAGCAACCCAGATGA...AGGAATCTTTCTACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CAA 90 bp | TCATCCATAAATCAAAATTACATTTCGAAGACTGTATCTCATACACAGGAGGCTCCGATTGCCTTTGCCTaGGCTTCAGAGGGCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSINQNYISKTVSHTQEAPIAFA*ASEGSS Trigger: AGAGCTGCCCTCTGAAGCCAAGGCAAAGGCAATCGG...AGCCTCCTGTGTATGAGATACAGTCTTCGAAATGTAATTTTGATTTATGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS-3UTR CAA 90 bp | TATTTTATGTGGAAAGAGCCGTGGGTACAAACAGGGACCAAAATCACCTATGTACATTCACTTCCTTTTTaGTGCCTTTCACGTGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: YFMWKEPWVQTGTKITYVHSLPF*CLSRGQ Trigger: TTGCCCACGTGAAAGGCACAAAAAAGGAAGTGAATG...TACATAGGTGATTTTGGTCCCTGTTTGTACCCACGGCTCTTTCCACATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 90 bp | TTCGACCTTGGTCCTATTTCAAAAGCCTTCTTGGGTTCTATTAACTaGAAAGTAAAGAGCTCCTCCTTTTTCAATTCCTTTAACTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: FDLGPISKAFLGSIN*KVKSSSFFNSFNFL Trigger: TAAGAAGTTAAAGGAATTGAAAAAGGAGGAGCTCTTTACTTTGCAGTTAATAGAACCCAAGAAGGCTTTTGAAATAGGACCAAGGTCGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 72 bp | TGCGTGCCGGAGCTGGGGGTCCGGGGACACCCTGGCTaGCACTGGATCTCTCGCCCTCCACCAGCCTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: CVPELGVRGHPG*HWISRPPPASR Trigger: CCGCGAGGCTGGTGGAGGGCGAGAGATCCAGTGGCAGCCAGGGTGTCCCCGGACCCCCAGCTCCGGCACGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS CAA 72 bp | GCGCTGCCGTGCGCCAGCTGTGCGTGGAACACCAGCTaGCGTGCCGGAGCTGGGGGTCCGGGGACACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALPCASCAWNTS*RAGAGGPGTPW Trigger: CCAGGGTGTCCCCGGACCCCCAGCTCCGGCACGCAAGCTGGTGTTCCACGCACAGCTGGCGCACGGCAGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS CCA 72 bp | AGCTTGCGTGCCGGAGCTGGGGGTCCGGGGACACCCTaGCTGCCACTGGATCTCTCGCCCTCCACCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLRAGAGGPGTP*LPLDLSPSTSL Trigger: GAGGCTGGTGGAGGGCGAGAGATCCAGTGGCAGCCAGGGTGTCCCCGGACCCCCAGCTCCGGCACGCAAGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 72 bp | CTGGAGAAGTCCTCCACTCGGCCCGTGGCGCTGCCGTaGGCCAGCTGTGCGTGGAACACCAGCTTGCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LEKSSTRPVALP*ASCAWNTSLRA Trigger: GGCACGCAAGCTGGTGTTCCACGCACAGCTGGCGCACGGCAGCGCCACGGGCCGAGTGGAGGACTTCTCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS CCA 72 bp | CAGCTGTGCGTGGAACACCAGCTTGCGTGCCGGAGCTaGGGGTCCGGGGACACCCTGGCTGCCACTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: QLCVEHQLACRS*GSGDTLAATGS Trigger: AGATCCAGTGGCAGCCAGGGTGTCCCCGGACCCCCAGCTCCGGCACGCAAGCTGGTGTTCCACGCACAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 72 bp | CAGCTCAAGGAGATCATCAACCTTTCCGATTGCCTTTaGCTTGGCTTCAGAGGGCAGCTCTTCTACTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: QLKEIINLSDCL*LGFRGQLFYCS Trigger: GCTACAGTAGAAGAGCTGCCCTCTGAAGCCAAGGCAAAGGCAATCGGAAAGGTTGATGATCTCCTTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 72 bp | CATGTACAGCTCAAGGAGATCATCAACCTTTCCGATTaGCTTTGCCTTGGCTTCAGAGGGCAGCTCTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: HVQLKEIINLSD*LCLGFRGQLFY Trigger: GTAGAAGAGCTGCCCTCTGAAGCCAAGGCAAAGGCAATCGGAAAGGTTGATGATCTCCTTGAGCTGTACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS CAA 90 bp | CCCAGAGTCTCGTCAAGAGCGACAGCAAACTCATCTGGGTTGCTCTaGTCTTTCCCAGCTTCAAACATGGTTGTAGCTAAGTCAATATCT | + |
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Preference number: 6 (lower is better) Translates to: PRVSSRATANSSGLL*SFPASNMVVAKSIS Trigger: AGATATTGACTTAGCTACAACCATGTTTGAAGCTGGGAAAGACAAGAGCAACCCAGATGAGTTTGCTGTCGCTCTTGACGAGACTCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS CAA 72 bp | TCGTCAAGAGCGACAGCAAACTCATCTGGGTTGCTCTaGTCTTTCCCAGCTTCAAACATGGTTGTAGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: SSRATANSSGLL*SFPASNMVVAK Trigger: CTTAGCTACAACCATGTTTGAAGCTGGGAAAGACAAGAGCAACCCAGATGAGTTTGCTGTCGCTCTTGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS CAA 90 bp | GATGTCTTTCCGGCTTTCGACCTTGGTCCTATTTCAAAAGCCTTCTaGGGTTCTATTAACTGCAAAGTAAAGAGCTCCTCCTTTTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: DVFPAFDLGPISKAF*GSINCKVKSSSFFN Trigger: ATTGAAAAAGGAGGAGCTCTTTACTTTGCAGTTAATAGAACCCAAGAAGGCTTTTGAAATAGGACCAAGGTCGAAAGCCGGAAAGACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS TCA 72 bp | ACATTCGATATGATCCCCCACACAGATCGTTTTAACTaGGTCAATGGTGCTGCCATCTTTAATTCTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: TFDMIPHTDRFN*VNGAAIFNSLD Trigger: ATCAAGAGAATTAAAGATGGCAGCACCATTGACTCAGTTAAAACGATCTGTGTGGGGGATCATATCGAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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| CDS GCA 72 bp | GGTCCTATTTCAAAAGCCTTCTTGGGTTCTATTAACTaGAAAGTAAAGAGCTCCTCCTTTTTCAATTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GPISKAFLGSIN*KVKSSSFFNSF Trigger: AAAGGAATTGAAAAAGGAGGAGCTCTTTACTTTGCAGTTAATAGAACCCAAGAAGGCTTTTGAAATAGGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046614.10 |
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