Pregenerated sensors for GIPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019433Ensembl transcript IDs: ENSMUST00000019577.10
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGAGCCTCGGCTGTGTGCCCAGGTCCCGGCTGTGGCACCCCTCCTaGAAACCCCAGCCAGGCCAAGCCAGGTTATCTCAAGGTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: TSLGCVPRSRLWHPS*KPQPGQARLSQGPG Trigger: ACCTGGACCTTGAGATAACCTGGCTTGGCCTGGCTGGGGTTTCCAGGAGGGGTGCCACAGCCGGGACCTGGGCACACAGCCGAGGCTCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR GCA 90 bp | GTACTGATTGGAGTGGGGCCAGGACCACAGGGCATTTGCACCCCATaGCTTTCCCAGGCTGCTGATTTACGAGCCTCGGCTGTGTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: VLIGVGPGPQGICTP*LSQAADLRASAVCP Trigger: TGGGCACACAGCCGAGGCTCGTAAATCAGCAGCCTGGGAAAGGCATGGGGTGCAAATGCCCTGTGGTCCTGGCCCCACTCCAATCAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR CCA 90 bp | CTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCCCAGTGTGTTaGTCCCTCCCATGCGAGTACTCTATTGAGGTAGGTGGGGAACCC | + |
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Preference number: 1 (lower is better) Translates to: LMVGNVGDRGDCPVC*SLPCEYSIEVGGEP Trigger: GGGTTCCCCACCTACCTCAATAGAGTACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTCCCACCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR GCA 90 bp | GGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTaGCCAGTGTGTTGGTCCCTCCCATGCGAGTACTCTATTGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: GSCQLMVGNVGDRGD*PVCWSLPCEYSIEV Trigger: TACCTCAATAGAGTACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTCTGTGGCACCCCTCCTaGAAACCCCAGCCAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: EMLGTEVTAQCVGPSHASLWHPS*KPQPGQ Trigger: TTGGCCTGGCTGGGGTTTCCAGGAGGGGTGCCACAG...ACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTACTCTCGTGGTGGTACTGATTaGAGTGGGGCCAGGACCACA | + |
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Preference number: 2 (lower is better) Translates to: VGDRGDCPVCWSLPCEYSRGGTD*SGARTT Trigger: TGTGGTCCTGGCCCCACTCCAATCAGTACCACCACG...AGAGTACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR GCA 72 bp | GGAGTGGGGCCAGGACCACAGGGCATTTGCACCCCATaGCTTTCCCAGGCTGCTGATTTACGAGCCTCGGCT | + |
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Preference number: 3 (lower is better) Translates to: GVGPGPQGICTP*LSQAADLRASA Trigger: AGCCGAGGCTCGTAAATCAGCAGCCTGGGAAAGGCATGGGGTGCAAATGCCCTGTGGTCCTGGCCCCACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR TCA 72 bp | TTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTaGCTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTA | + |
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Preference number: 3 (lower is better) Translates to: LPADGGKCWGQR*LPSVLVPPMRV Trigger: TACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| 3UTR CCA 72 bp | GGAAATGTTGGGGACAGAGGTGACTGCCCAGTGTGTTaGTCCCTCCCATGCGAGTACTCTATTGAGGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: GNVGDRGDCPVC*SLPCEYSIEVG Trigger: ACCTACCTCAATAGAGTACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | CCTCGGCTGTGTGCCCAGGTCCCGGCTGTGGCACCCCTCCTGGAAACCCCAGCCCCTCGATGCGGCCTGTaGGGCTGCCGTGGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PRLCAQVPAVAPLLETPAPRCGL*GCRGPA Trigger: AGCTGGCCCACGGCAGCCCCACAGGCCGCATCGAGG...GGCTGGGGTTTCCAGGAGGGGTGCCACAGCCGGGACCTGGGCACACAGCCGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | ACGAGCCTCGGCTGTGTGCCCAGGTCCCGGCTGTGGCACCCCTCCTGGAAACCCGCAGATCCTCCACGGTaGCAGGGCCCCGGGATCGGA | + |
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Preference number: 4 (lower is better) Translates to: TSLGCVPRSRLWHPSWKPADPPR*QGPGIG Trigger: TCCGATCCCGGGGCCCTGCCACCGTGGAGGATCTGC...GGGTTTCCAGGAGGGGTGCCACAGCCGGGACCTGGGCACACAGCCGAGGCTCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR GCA 90 bp | TTACGAGCCTCGGCTGTGTGCCCAGGTCCCGGCTGTGGCACCCCTCCTGGAAACCTGGGATTCTCCTGCTaGGCTCCCACCCAGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LRASAVCPGPGCGTPPGNLGFSC*APTQGP Trigger: GGGCCCCTGGGTGGGAGCGCAGCAGGAGAATCCCAG...GTTTCCAGGAGGGGTGCCACAGCCGGGACCTGGGCACACAGCCGAGGCTCGTAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | GCACCCCTCCTGGAAACCCCAGCCAGGCCAAGCCAGGTTATCTCAAGGTCCAGGTGGGCCAGCTGGGTATaGAACACGAGGCGAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: APLLETPARPSQVISRSRWASWV*NTRRGR Trigger: CCGGCCTCGCCTCGTGTTCCATACCCAGCTGGCCCA...CCTGGACCTTGAGATAACCTGGCTTGGCCTGGCTGGGGTTTCCAGGAGGGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | AAGAGAACTGAGGCCCAGGGGGACAGAAGGGGCAGTTGCCAGCTGATGGTGGGAGAGGGCAGCAGGAGGTaGGGGCAAGCCCATCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: KRTEAQGDRRGSCQLMVGEGSRR*GQAHLG Trigger: TCCCAGATGGGCTTGCCCCCACCTCCTGCTGCCCTC...TCCCACCATCAGCTGGCAACTGCCCCTTCTGTCCCCCTGGGCCTCAGTTCTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCACCCCTCCTGGAAACCCCAGCCAGGCCAAGCCAGGTTATCTCAAGCTGCCGTGGGCCAGCTaGGTATGGAACACGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GCGTPPGNPSQAKPGYLKLPWAS*VWNTRR Trigger: TCGCCTCGTGTTCCATACCCAGCTGGCCCACGGCAG...CTTGAGATAACCTGGCTTGGCCTGGCTGGGGTTTCCAGGAGGGGTGCCACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR TCA 90 bp | ATTTACGAGCCTCGGCTGTGTGCCCAGGTCCCGGCTGTGGCACCCCTCCTGGAAGCAGGCTCTGCCCGTTaGTGGCTTCAATCATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: IYEPRLCAQVPAVAPLLEAGSAR*WLQSCP Trigger: GGGACATGATTGAAGCCATCAACGGGCAGAGCCTGC...TTCCAGGAGGGGTGCCACAGCCGGGACCTGGGCACACAGCCGAGGCTCGTAAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR GCA 90 bp | TTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTACTCTATGCGGCCTGTGGGGCTaGCGTGGGCCAGCTGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LGTEVTAQCVGPSHASTLCGLWG*RGPAGY Trigger: ATACCCAGCTGGCCCACGGCAGCCCCACAGGCCGCA...TAGAGTACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | GAAATGTTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTGGGCCTGAACCAGGGTaGCCACCGGCTGAACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EMLGTEVTAQCVGPSHASGPEPG*PPAERW Trigger: CCAGCGTTCAGCCGGTGGCCACCCTGGTTCAGGCCC...ACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR TCA 90 bp | TTACGAGCCTCGGCTGTGTGCCCAGGTCCCGGCTGTGGCACCCCTCCTGGAAACCCCACGCTGATGAGCTaGATGTGGTCAATCACACTG | + |
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Preference number: 4 (lower is better) Translates to: LRASAVCPGPGCGTPPGNPTLMS*MWSITL Trigger: CAGTGTGATTGACCACATTCAGCTCATCAGCGTGGG...GTTTCCAGGAGGGGTGCCACAGCCGGGACCTGGGCACACAGCCGAGGCTCGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR TCA 90 bp | AGAAGGGGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCCTCGGGGCAGCTCCTTaGGGAGCCTGGCAACCTCGT | + |
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Preference number: 4 (lower is better) Translates to: RRGSCQLMVGNVGDRGDCLGAAP*GAWQPR Trigger: ACGAGGTTGCCAGGCTCCTCAAGGAGCTGCCCCGAG...GCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCCCCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR GCA 90 bp | GAAATGTTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTGGGTCCCTCGGCCAGTaGCCAGTTGTGGGCCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: EMLGTEVTAQCVGPSHASGSLGQ*PVVGLN Trigger: GTTCAGGCCCACAACTGGGCACTGGCCGAGGGACCC...ACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | TTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTACTCTACCTGTGGGGCTGCCGTaGGCCAGCTGGGTATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LGTEVTAQCVGPSHASTLPVGLP*ASWVWN Trigger: GTTCCATACCCAGCTGGCCCACGGCAGCCCCACAGG...TAGAGTACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR TCA 90 bp | GGCTGTGGCACCCCTCCTGGAAACCCCAGCCAGGCCAAGCCAGGTTATCTCAAGCCAGCTCCGTGTCTCTaGTCCCCATGTAGCTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: GCGTPPGNPSQAKPGYLKPAPCL*SPCSSL Trigger: TAGAGAGCTACATGGGGATCAGAGACACGGAGCTGG...CTTGAGATAACCTGGCTTGGCCTGGCTGGGGTTTCCAGGAGGGGTGCCACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | GAAATGTTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTCCAGCTCCACCATGGTaGCAGCCAGCTCCGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: EMLGTEVTAQCVGPSHASPAPPW*QPAPCL Trigger: GAGACACGGAGCTGGCTGCCACCATGGTGGAGCTGG...ACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAACATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR TCA 90 bp | AGAAGGGGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCAGGGTGGCCACCGGCTaGACGCTGGCTGATCATATC | + |
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Preference number: 4 (lower is better) Translates to: RRGSCQLMVGNVGDRGDCRVATG*TLADHI Trigger: GATATGATCAGCCAGCGTTCAGCCGGTGGCCACCCT...GCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCCCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCTTCCCAGCTCCACCATaGTGGCAGCCAGCTCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RRGSCQLMVGNVGDRGDCFPAPP*WQPAPC Trigger: ACACGGAGCTGGCTGCCACCATGGTGGAGCTGGGAA...GCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCCCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR TCA 90 bp | GCACCCCTCCTGGAAACCCCAGCCAGGCCAAGCCAGGTTATCTCAAGGTCCAGGTCACATGGGCAAAGATaGAGTCTTCCAGGCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: APLLETPARPSQVISRSRSHGQR*SLPGRS Trigger: AGATCGGCCTGGAAGACTTCATCTTTGCCCATGTGA...CCTGGACCTTGAGATAACCTGGCTTGGCCTGGCTGGGGTTTCCAGGAGGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR GCA 90 bp | AGAAGGGGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCCAGCCCAGCAGGCTCTaGCCGTTGATGGCTTCAATC | + |
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Preference number: 4 (lower is better) Translates to: RRGSCQLMVGNVGDRGDCQPSRL*PLMASI Trigger: GATTGAAGCCATCAACGGGCAGAGCCTGCTGGGCTG...GCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR GCA 90 bp | TTGGGGACAGAGGTGACTGCCCAGTGTGTTGGTCCCTCCCATGCGAGTACTCTAACACTTCCACCTCTTTaGGCTGCCCCTTCACATGGG | + |
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Preference number: 4 (lower is better) Translates to: LGTEVTAQCVGPSHASTLTLPPL*AAPSHG Trigger: CCCATGTGAAGGGGCAGCGCAAAGAGGTGGAAGTGT...TAGAGTACTCGCATGGGAGGGACCAACACACTGGGCAGTCACCTCTGTCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCCGCTGCCCCTTCACATaGGCAAAGATGAAGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRGSCQLMVGNVGDRGDCRCPFT*AKMKSS Trigger: GGAAGACTTCATCTTTGCCCATGTGAAGGGGCAGCG...GCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCCATCCACCTTCTCAATaGCCTTCTCCTCAAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RRGSCQLMVGNVGDRGDCHPPSQ*PSPQRP Trigger: CGGCCTTTGAGGAGAAGGCCATTGAGAAGGTGGATG...GCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCACCCCTCCTGGAAACCCCAGCCAGGCCAAGCCAGGTTATCTCAAGAAAGACAAATTCATCTaGGAATGCGAAGTCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: GCGTPPGNPSQAKPGYLKKDKFI*ECEVTE Trigger: CTCGGTGACTTCGCATTCCCAGATGAATTTGTCTTT...CTTGAGATAACCTGGCTTGGCCTGGCTGGGGTTTCCAGGAGGGGTGCCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS GCA 90 bp | CGGTGGCAGGGCCCCGGGATCGGAGACGGAGGGTCCCTCGGCCAGTaGCCAGTTGTGGGCCTGAACCAGGGTGGCCACCGGCTGAACGCT | + |
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Preference number: 5 (lower is better) Translates to: RWQGPGIGDGGSLGQ*PVVGLNQGGHRLNA Trigger: AGCGTTCAGCCGGTGGCCACCCTGGTTCAGGCCCACAACTGGGCACTGGCCGAGGGACCCTCCGTCTCCGATCCCGGGGCCCTGCCACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CAA 90 bp | AAGAGAACTGAGGCCCAGGGGGACAGAAGGGGCAGTTGCCAGCTGATGGTGGGACCTCGGGGCAGCTCCTaGAGGAGCCTGGCAACCTCG | + |
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Preference number: 5 (lower is better) Translates to: KRTEAQGDRRGSCQLMVGPRGSS*RSLATS Trigger: CGAGGTTGCCAGGCTCCTCAAGGAGCTGCCCCGAGG...TCCCACCATCAGCTGGCAACTGCCCCTTCTGTCCCCCTGGGCCTCAGTTCTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CCA 90 bp | CGGAGGGTCCCTCGGCCAGTGCCCAGTTGTGGGCCTGAACCAGGGTaGCCACCGGCTGAACGCTGGCTGATCATATCAAAGGCCTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: RRVPRPVPSCGPEPG*PPAERWLIISKAFR Trigger: TCGAAAGGCCTTTGATATGATCAGCCAGCGTTCAGCCGGTGGCCACCCTGGTTCAGGCCCACAACTGGGCACTGGCCGAGGGACCCTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CAA 90 bp | ACGAGCCTCGGCTGTGTGCCCAGGTCCCGGCTGTGGCACCCCTCCTGGAAACCCAGAGCCTCCTCCGACTaGAACACTTCCACCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: TSLGCVPRSRLWHPSWKPRASSD*NTSTSL Trigger: CAAAGAGGTGGAAGTGTTCAAGTCGGAGGAGGCTCT...GGGTTTCCAGGAGGGGTGCCACAGCCGGGACCTGGGCACACAGCCGAGGCTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CAA 90 bp | GAGTGGGGCCAGGACCACAGGGCATTTGCACCCCATGCCTTTCCCAGGCTGCTGCGAGGTTCTGTGAGTTaGAGGGTGAAGGTGCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: EWGQDHRAFAPHAFPRLLRGSVS*RVKVRP Trigger: AGGCCGCACCTTCACCCTCAAACTCACAGAACCTCG...CAGCAGCCTGGGAAAGGCATGGGGTGCAAATGCCCTGTGGTCCTGGCCCCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CAA 90 bp | GCACCCCTCCTGGAAACCCCAGCCAGGCCAAGCCAGGTTATCTCAAGGTCCAGGAACACTTCCACCTCTTaGCGCTGCCCCTTCACATGG | + |
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Preference number: 5 (lower is better) Translates to: APLLETPARPSQVISRSRNTSTS*RCPFTW Trigger: CCATGTGAAGGGGCAGCGCAAAGAGGTGGAAGTGTT...CCTGGACCTTGAGATAACCTGGCTTGGCCTGGCTGGGGTTTCCAGGAGGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CAA 90 bp | AAGAGAACTGAGGCCCAGGGGGACAGAAGGGGCAGTTGCCAGCTGATGGTGGGAAAGGCCTCAGCGATCTaGCCGTACAGCTCCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: KRTEAQGDRRGSCQLMVGKASAI*PYSSLT Trigger: TGTCAAGGAGCTGTACGGCAAGATCGCTGAGGCCTT...TCCCACCATCAGCTGGCAACTGCCCCTTCTGTCCCCCTGGGCCTCAGTTCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS GCA 90 bp | TTCATCTGGGAATGCGAAGTCACCGAGCCGCTCATCCAGGGCTTCTaGCAGCTCGTCCGGGTTCCTTTTGTCCTTTCCCAGCTCCACCAT | + |
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Preference number: 5 (lower is better) Translates to: FIWECEVTEPLIQGF*QLVRVPFVLSQLHH Trigger: ATGGTGGAGCTGGGAAAGGACAAAAGGAACCCGGACGAGCTGGCAGAAGCCCTGGATGAGCGGCTCGGTGACTTCGCATTCCCAGATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CCA 90 bp | GTGCCCAGTTGTGGGCCTGAACCAGGGTGGCCACCGGCTGAACGCTaGCTGATCATATCAAAGGCCTTTCGAGGTTCTGTGAGTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: VPSCGPEPGWPPAER*LIISKAFRGSVSLR Trigger: CCTCAAACTCACAGAACCTCGAAAGGCCTTTGATATGATCAGCCAGCGTTCAGCCGGTGGCCACCCTGGTTCAGGCCCACAACTGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGCAGTTGCCAGCTGATGGTGGGAAATGTTGGGGACAGAGGTGACTGCAGCAGGCTCTGCCCGTaGATGGCTTCAATCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: RRGSCQLMVGNVGDRGDCSRLCP*MASIMS Trigger: GGACATGATTGAAGCCATCAACGGGCAGAGCCTGCT...GCAGTCACCTCTGTCCCCAACATTTCCCACCATCAGCTGGCAACTGCCCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CCA 90 bp | CTTGGCATCCCCGATAGCTCCCCAGACATCAAAGACAAATTCATCTaGGAATGCGAAGTCACCGAGCCGCTCATCCAGGGCTTCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LGIPDSSPDIKDKFI*ECEVTEPLIQGFCQ Trigger: CTGGCAGAAGCCCTGGATGAGCGGCTCGGTGACTTCGCATTCCCAGATGAATTTGTCTTTGATGTCTGGGGAGCTATCGGGGATGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS GCA 72 bp | GGCCCCGGGATCGGAGACGGAGGGTCCCTCGGCCAGTaGCCAGTTGTGGGCCTGAACCAGGGTGGCCACCGG | + |
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Preference number: 6 (lower is better) Translates to: GPGIGDGGSLGQ*PVVGLNQGGHR Trigger: CCGGTGGCCACCCTGGTTCAGGCCCACAACTGGGCACTGGCCGAGGGACCCTCCGTCTCCGATCCCGGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CCA 72 bp | CCCTCGATGCGGCCTGTGGGGCTGCCGTGGGCCAGCTaGGTATGGAACACGAGGCGAGGCCGGAGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PSMRPVGLPWAS*VWNTRRGRRAA Trigger: TGCTGCCCTCCGGCCTCGCCTCGTGTTCCATACCCAGCTGGCCCACGGCAGCCCCACAGGCCGCATCGAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CCA 72 bp | CCTTCTCCTCAAAGGCCGACGGCAGATCCTCCACGGTaGCAGGGCCCCGGGATCGGAGACGGAGGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSPQRPTADPPR*QGPGIGDGGSL Trigger: GAGGGACCCTCCGTCTCCGATCCCGGGGCCCTGCCACCGTGGAGGATCTGCCGTCGGCCTTTGAGGAGAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CAA 90 bp | CCGAGCCGCTCATCCAGGGCTTCTGCCAGCTCGTCCGGGTTCCTTTaGTCCTTTCCCAGCTCCACCATGGTGGCAGCCAGCTCCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PSRSSRASASSSGFL*SFPSSTMVAASSVS Trigger: AGACACGGAGCTGGCTGCCACCATGGTGGAGCTGGGAAAGGACAAAAGGAACCCGGACGAGCTGGCAGAAGCCCTGGATGAGCGGCTCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CCA 72 bp | CCTCGGCCAGTGCCCAGTTGTGGGCCTGAACCAGGGTaGCCACCGGCTGAACGCTGGCTGATCATATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PRPVPSCGPEPG*PPAERWLIISK Trigger: CTTTGATATGATCAGCCAGCGTTCAGCCGGTGGCCACCCTGGTTCAGGCCCACAACTGGGCACTGGCCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CAA 90 bp | GAACGCTGGCTGATCATATCAAAGGCCTTTCGAGGTTCTGTGAGTTaGAGGGTGAAGGTGCGGCCTCGGGGCAGCTCCTTGAGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ERWLIISKAFRGSVS*RVKVRPRGSSLRSL Trigger: CAGGCTCCTCAAGGAGCTGCCCCGAGGCCGCACCTTCACCCTCAAACTCACAGAACCTCGAAAGGCCTTTGATATGATCAGCCAGCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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| CDS CCA 72 bp | CCATGTAGCTCTCTAGCAAGTCATCCACCTTCTCAATaGCCTTCTCCTCAAAGGCCGACGGCAGATCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PCSSLASHPPSQ*PSPQRPTADPP Trigger: TGGAGGATCTGCCGTCGGCCTTTGAGGAGAAGGCCATTGAGAAGGTGGATGACTTGCTAGAGAGCTACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019577.10 |
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