Pregenerated sensors for GIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014351Ensembl transcript IDs: ENSMUST00000103156.2, ENSMUST00000103157.10
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 72 bp | CTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTaGACCAGGGCGGAAGCAGGAGCCAAGCAAGCTAAG | + |
Preference number: 3 (lower is better) Translates to: LKALLVWFSQRL*TRAEAGAKQAK Trigger: CTTAGCTTGCTTGGCTCCTGCTTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR TCA 90 bp | GAAGCAGGAGCCAAGCAAGCTAAGGTCAGAGTCCAGTCCTGCTCTGGGCTAGGTGGGCCTCTCTCTGGGTaGTGTTGTGTTTCCAGTCAC | + |
Preference number: 4 (lower is better) Translates to: EAGAKQAKVRVQSCSGLGGPLSG*CCVSSH Trigger: GTGACTGGAAACACAACATCACCCAGAGAGAGGCCC...ACCTAGCCCAGAGCAGGACTGGACTCTGACCTTAGCTTGCTTGGCTCCTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR GCA 90 bp | GAAGCAGGAGCCAAGCAAGCTAAGGTCAGAGTCCAGTCCTGCTCTGGGCTAGGTGATGAAAGTCCCCTCTaGGTACCTTGGACCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: EAGAKQAKVRVQSCSGLGDESPL*VPWTSR Trigger: CCTCGAGGTCCAAGGTACGCAGAGGGGACTTTCATC...ACCTAGCCCAGAGCAGGACTGGACTCTGACCTTAGCTTGCTTGGCTCCTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR TCA 90 bp | CAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGAATTGTCCTCCTTTCCCTaGGATTGCCCTGCCAGCACC | + |
Preference number: 4 (lower is better) Translates to: QLKALLVWFSQRLWTRAELSSFP*DCPAST Trigger: GGTGCTGGCAGGGCAATCTCAGGGAAAGGAGGACAA...TTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CCA 90 bp | CTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGAAGCAGCCCGGGCCTCTCTCTaGGTGATGTTGTGTTTCCAG | + |
Preference number: 4 (lower is better) Translates to: LKALLVWFSQRLWTRAEAARASL*VMLCFQ Trigger: CTGGAAACACAACATCACCCAGAGAGAGGCCCGGGC...TGCTTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR GCA 90 bp | CTTCAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGATGAAAGTCCCCTCTaGGTACCTTGGACCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: LQLKALLVWFSQRLWTRADESPL*VPWTSR Trigger: CCTCGAGGTCCAAGGTACGCAGAGGGGACTTTCATC...CGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR GCA 90 bp | CTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGAAGCACTTCTTCCCCCTCTGTaGCAGCAGCCAGTTCACGAA | + |
Preference number: 4 (lower is better) Translates to: LKALLVWFSQRLWTRAEALLPPL*QQPVHE Trigger: TTCGTGAACTGGCTGCTGGCACAGAGGGGGAAGAAG...TGCTTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR TCA 90 bp | TACTTCAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGTTGTCCTCCTTTCCCTaGGATTGCCCTGCCAGCACC | + |
Preference number: 4 (lower is better) Translates to: YFSLRLYWFGSLRDFGPGLSSFP*DCPAST Trigger: GGTGCTGGCAGGGCAATCTCAGGGAAAGGAGGACAA...CCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CCA 90 bp | TACTTCAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGGCCCGGGCCTCTCTCTaGGTGATGTTGTGTTTCCAG | + |
Preference number: 4 (lower is better) Translates to: YFSLRLYWFGSLRDFGPGARASL*VMLCFQ Trigger: CTGGAAACACAACATCACCCAGAGAGAGGCCCGGGC...CCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR GCA 90 bp | TTACTTCAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGCTTCTTCCCCCTCTGTaGCAGCAGCCAGTTCACGAA | + |
Preference number: 4 (lower is better) Translates to: LLQLKALLVWFSQRLWTRLLPPL*QQPVHE Trigger: TTCGTGAACTGGCTGCTGGCACAGAGGGGGAAGAAG...CCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTGAAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS CCA 90 bp | CATGGCGATGCTGTAATCACTGATGAAAGTCCCCTCTGCGTACCTTaGACCTCGAGGTCGAGGGCCAGCAAATTTAGCATGGGATCGGAA | + |
Preference number: 5 (lower is better) Translates to: HGDAVITDESPLCVP*TSRSRASKFSMGSE Trigger: TTCCGATCCCATGCTAAATTTGCTGGCCCTCGACCTCGAGGTCCAAGGTACGCAGAGGGGACTTTCATCAGTGATTACAGCATCGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS TCA 90 bp | AGTCGGCAGAGCTCTGTTTGGTCCACCATCCAGGCCAGTAGCTCTTaGATCAGAAGGTCTCTCAGCACATCATCATCACTGAGGCTCTTG | + |
Preference number: 5 (lower is better) Translates to: SRQSSVWSTIQASSS*IRRSLSTSSSLRLL Trigger: CAAGAGCCTCAGTGATGATGATGTGCTGAGAGACCTTCTGATTCAAGAGCTACTGGCCTGGATGGTGGACCAAACAGAGCTCTGCCGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS GCA 90 bp | GATCTTGTCCATGGCGATGCTGTAATCACTGATGAAAGTCCCCTCTaGGTACCTTGGACCTCGAGGTCGAGGGCCAGCAAATTTAGCATG | + |
Preference number: 5 (lower is better) Translates to: DLVHGDAVITDESPL*VPWTSRSRASKFSM Trigger: CATGCTAAATTTGCTGGCCCTCGACCTCGAGGTCCAAGGTACGCAGAGGGGACTTTCATCAGTGATTACAGCATCGCCATGGACAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CAA 90 bp | CAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGAACTCCTTTCCCTGAGATaGCCCTGCCAGCACCAAAGC | + |
Preference number: 5 (lower is better) Translates to: QLKALLVWFSQRLWTRAELLSLR*PCQHQS Trigger: GCTTTGGTGCTGGCAGGGCAATCTCAGGGAAAGGAG...TTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS TCA 90 bp | CCAGTAGCTCTTGAATCAGAAGGTCTCTCAGCACATCATCATCACTaGGGCTCTTGGGCAAAGAGCTCTCCTGTGCCTCTTTGTCCTCCT | + |
Preference number: 5 (lower is better) Translates to: PVALESEGLSAHHHH*GSWAKSSPVPLCPP Trigger: AGGAGGACAAAGAGGCACAGGAGAGCTCTTTGCCCAAGAGCCTCAGTGATGATGATGTGCTGAGAGACCTTCTGATTCAAGAGCTACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS GCA 90 bp | TCTCTGGGTGATGTTGTGTTTCCAGTCACTCTTCTTCCCCCTCTGTaGCAGCAGCCAGTTCACGAAGTCTTGTTGTCGGATCTTGTCCAT | + |
Preference number: 5 (lower is better) Translates to: SLGDVVFPVTLLPPL*QQPVHEVLLSDLVH Trigger: ATGGACAAGATCCGACAACAAGACTTCGTGAACTGGCTGCTGGCACAGAGGGGGAAGAAGAGTGACTGGAAACACAACATCACCCAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CAA 90 bp | CTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGAAGCAGTTCACGAAGTCTTGTaGTCGGATCTTGTCCATGGC | + |
Preference number: 5 (lower is better) Translates to: LKALLVWFSQRLWTRAEAVHEVL*SDLVHG Trigger: GCCATGGACAAGATCCGACAACAAGACTTCGTGAAC...TGCTTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CAA 90 bp | CAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGAAGTTCACGAAGTCTTGTaGTCGGATCTTGTCCATGGC | + |
Preference number: 5 (lower is better) Translates to: QLKALLVWFSQRLWTRAEVHEVL*SDLVHG Trigger: GCCATGGACAAGATCCGACAACAAGACTTCGTGAAC...TTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CAA 90 bp | AGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGCGGAAGCCAGTTCACGAAGTCTaGTTGTCGGATCTTGTCCAT | + |
Preference number: 5 (lower is better) Translates to: SLRLYWFGSLRDFGPGRKPVHEV*LSDLVH Trigger: ATGGACAAGATCCGACAACAAGACTTCGTGAACTGG...CTTCCGCCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CAA 90 bp | TACTTCAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGGTCATCACTGAGGCTCTaGGGCAAAGAGCTCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: YFSLRLYWFGSLRDFGPGSSLRL*GKELSC Trigger: ACAGGAGAGCTCTTTGCCCAAGAGCCTCAGTGATGA...CCCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS-3UTR CAA 90 bp | TTACTTCAGCTTAAGGCTTTATTGGTTTGGTTCTCTCAGAGACTTTGGACCAGGCCAGTTCACGAAGTCTaGTTGTCGGATCTTGTCCAT | + |
Preference number: 5 (lower is better) Translates to: LLQLKALLVWFSQRLWTRPVHEV*LSDLVH Trigger: ATGGACAAGATCCGACAACAAGACTTCGTGAACTGG...CCTGGTCCAAAGTCTCTGAGAGAACCAAACCAATAAAGCCTTAAGCTGAAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS GCA 72 bp | CATGGCGATGCTGTAATCACTGATGAAAGTCCCCTCTaGGTACCTTGGACCTCGAGGTCGAGGGCCAGCAAA | + |
Preference number: 6 (lower is better) Translates to: HGDAVITDESPL*VPWTSRSRASK Trigger: TTTGCTGGCCCTCGACCTCGAGGTCCAAGGTACGCAGAGGGGACTTTCATCAGTGATTACAGCATCGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS CAA 72 bp | CCCCCTCTGTGCCAGCAGCCAGTTCACGAAGTCTTGTaGTCGGATCTTGTCCATGGCGATGCTGTAATCACT | + |
Preference number: 6 (lower is better) Translates to: PPLCQQPVHEVL*SDLVHGDAVIT Trigger: AGTGATTACAGCATCGCCATGGACAAGATCCGACAACAAGACTTCGTGAACTGGCTGCTGGCACAGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS CAA 72 bp | CTTCCCCCTCTGTGCCAGCAGCCAGTTCACGAAGTCTaGTTGTCGGATCTTGTCCATGGCGATGCTGTAATC | + |
Preference number: 6 (lower is better) Translates to: LPPLCQQPVHEV*LSDLVHGDAVI Trigger: GATTACAGCATCGCCATGGACAAGATCCGACAACAAGACTTCGTGAACTGGCTGCTGGCACAGAGGGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS CCA 72 bp | CTTGGACCTCGAGGTCGAGGGCCAGCAAATTTAGCATaGGATCGGAACTCAACCTCTTCTTTTTCTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: LGPRGRGPANLA*DRNSTSSFSPS Trigger: GCTGGGAGAAAAAGAAGAGGTTGAGTTCCGATCCCATGCTAAATTTGCTGGCCCTCGACCTCGAGGTCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS CCA 72 bp | GCTGTAATCACTGATGAAAGTCCCCTCTGCGTACCTTaGACCTCGAGGTCGAGGGCCAGCAAATTTAGCATG | + |
Preference number: 6 (lower is better) Translates to: AVITDESPLCVP*TSRSRASKFSM Trigger: CATGCTAAATTTGCTGGCCCTCGACCTCGAGGTCCAAGGTACGCAGAGGGGACTTTCATCAGTGATTACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS CAA 72 bp | AGAAGGTCTCTCAGCACATCATCATCACTGAGGCTCTaGGGCAAAGAGCTCTCCTGTGCCTCTTTGTCCTCC | + |
Preference number: 6 (lower is better) Translates to: RRSLSTSSSLRL*GKELSCASLSS Trigger: GGAGGACAAAGAGGCACAGGAGAGCTCTTTGCCCAAGAGCCTCAGTGATGATGATGTGCTGAGAGACCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS CAA 90 bp | ACTCTTCTTCCCCCTCTGTGCCAGCAGCCAGTTCACGAAGTCTTGTaGTCGGATCTTGTCCATGGCGATGCTGTAATCACTGATGAAAGT | + |
Preference number: 6 (lower is better) Translates to: TLLPPLCQQPVHEVL*SDLVHGDAVITDES Trigger: ACTTTCATCAGTGATTACAGCATCGCCATGGACAAGATCCGACAACAAGACTTCGTGAACTGGCTGCTGGCACAGAGGGGGAAGAAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS TCA 72 bp | CTTGAATCAGAAGGTCTCTCAGCACATCATCATCACTaGGGCTCTTGGGCAAAGAGCTCTCCTGTGCCTCTT | + |
Preference number: 6 (lower is better) Translates to: LESEGLSAHHHH*GSWAKSSPVPL Trigger: AAGAGGCACAGGAGAGCTCTTTGCCCAAGAGCCTCAGTGATGATGATGTGCTGAGAGACCTTCTGATTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |
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CDS TCA 72 bp | AGCTCTGTTTGGTCCACCATCCAGGCCAGTAGCTCTTaGATCAGAAGGTCTCTCAGCACATCATCATCACTG | + |
Preference number: 6 (lower is better) Translates to: SSVWSTIQASSS*IRRSLSTSSSL Trigger: CAGTGATGATGATGTGCTGAGAGACCTTCTGATTCAAGAGCTACTGGCCTGGATGGTGGACCAAACAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103156.2 ENSMUST00000103157.10 |