Pregenerated sensors for GINS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031669Ensembl transcript IDs: ENSMUST00000034094.11, ENSMUST00000212434.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGAGGAATCTGAGTTCCAACTTGACTGTGTATGCAACATGTCTGTaGTCCTTGCTTAAGATGGAGTCTGGCTCCTCCTCAGCTGCATTC | + |
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Preference number: 1 (lower is better) Translates to: PRNLSSNLTVYATCL*SLLKMESGSSSAAF Trigger: GAATGCAGCTGAGGAGGAGCCAGACTCCATCTTAAGCAAGGAGCACAGACATGTTGCATACACAGTCAAGTTGGAACTCAGATTCCTCGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR CCA 90 bp | GGGCTCTTCCCAACCTGTAAGCCCCTGATGCAATTATACAAAGGTTaGCAAACATCCTTTCATAACTACTTTGCAATTCCTAACACCTCC | + |
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Preference number: 1 (lower is better) Translates to: GLFPTCKPLMQLYKG*QTSFHNYFAIPNTS Trigger: GGAGGTGTTAGGAATTGCAAAGTAGTTATGAAAGGATGTTTGCCAACCTTTGTATAATTGCATCAGGGGCTTACAGGTTGGGAAGAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTCATAGGATACCAGGGGTGGCCAGTGGTGTGGAGAATCTGCCCACCAGAGAGACTCCCAGTAAGTaGTCAGGGGTGCTTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SGHRIPGVASGVENLPTRETPSK*SGVLFA Trigger: TGCAAAAAGCACCCCTGACCACTTACTGGGAGTCTC...TCTGGTGGGCAGATTCTCCACACCACTGGCCACCCCTGGTATCCTATGACCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGCCTCAGCTGCATTCCTaGGCCAAAAGCCTATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: QWCGESAHQTIQRAPGNEPQLHS*AKSLCC Trigger: ACAGCATAGGCTTTTGGCCCAGGAATGCAGCTGAGG...CTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTCATAGGATACCAGGGGTGGCCAGTGGTGTGGAGAATCTGCCCACCAGATGGAAGATGGCTGCCTaGAGAGTTTTTCTAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: SGHRIPGVASGVENLPTRWKMAA*RVFLDR Trigger: CCTGTCTAGAAAAACTCTCCAGGCAGCCATCTTCCA...TCTGGTGGGCAGATTCTCCACACCACTGGCCACCCCTGGTATCCTATGACCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGAGAGATGACTCACTTTaGAGCCAACGAGACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: QWCGESAHQTIQRAPGNERDDSL*SQRDQT Trigger: TGTCTGGTCTCGTTGGCTGCAAAGTGAGTCATCTCT...CTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGTCAGGAAGCTGTCTCTaGTCTTCAAGTGCTCAATCC | + |
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Preference number: 2 (lower is better) Translates to: QWCGESAHQTIQRAPGNESGSCL*SSSAQS Trigger: GGATTGAGCACTTGAAGAGCAGAGACAGCTTCCTGA...CTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR CAA 90 bp | AATCTGAGTTCCAACTTGACTGTGTATGCAACATGTCTGTGCTCCTaGCTTAAGATGGAGTCTGGCTCCTCCTCAGCTGCATTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: NLSSNLTVYATCLCS*LKMESGSSSAAFLG Trigger: GCCCAGGAATGCAGCTGAGGAGGAGCCAGACTCCATCTTAAGCAAGGAGCACAGACATGTTGCATACACAGTCAAGTTGGAACTCAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGCGCTCTAAAGATTCCTaGCAAACACAAGTACATGGC | + |
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Preference number: 2 (lower is better) Translates to: QWCGESAHQTIQRAPGNERSKDS*QTQVHG Trigger: GCCATGTACTTGTGTTTGTCAGGAATCTTTAGAGCG...CTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGTTACTGGAAGATGGCTaGCTGGAGAGTTTTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QWCGESAHQTIQRAPGNELLEDG*LESFSR Trigger: TCTAGAAAAACTCTCCAGGCAGCCATCTTCCAGTAA...CTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR TCA 90 bp | ATGGTCTGGGGAACTTGTCCCTCTCAGTTTGGTGCATGTTTAAAGAGACTCCCATTGTACATTAGGCCATaGACTCATATGGAACGGGCT | + |
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Preference number: 2 (lower is better) Translates to: MVWGTCPSQFGACLKRLPLYIRP*THMERA Trigger: AGCCCGTTCCATATGAGTTCATGGCCTAATGTACAA...TGGGAGTCTCTTTAAACATGCACCAAACTGAGAGGGACAAGTTCCCCAGACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGACTTTTGTCCCTCTCAGTTTaGTGCATGTTTAAAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: GVENLPTRQSKGLQEMRLLSLSV*CMFKET Trigger: AGTCTCTTTAAACATGCACCAAACTGAGAGGGACAA...AAGTCTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR GCA 90 bp | TTATACAAAGGTTGGCAAACATCCTTTCATAACTACTTTGCAATTCCTAACACCTGGCTCCTCCTCAGCTaGATTCCTGGGCCAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LYKGWQTSFHNYFAIPNTWLLLS*IPGPKA Trigger: GGCTTTTGGCCCAGGAATGCAGCTGAGGAGGAGCCA...GGTGTTAGGAATTGCAAAGTAGTTATGAAAGGATGTTTGCCAACCTTTGTATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTAAGTTTCCATTAAACAACTGTGTTATCTGGACACCCAAAGCTCTCCTTGTTCTGCCATTCATCTaGCTTTCCACTTTTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: IFKFPLNNCVIWTPKALLVLPFI*LSTFLP Trigger: GGGGAGAAAAGTGGAAAGTCAGATGAATGGCAGAAC...AAGGAGAGCTTTGGGTGTCCAGATAACACAGTTGTTTAATGGAAACTTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR GCA 90 bp | ATTTTTAAGTTTCCATTAAACAACTGTGTTATCTGGACACCCAAAGCTCTCCTTGCAGCATTGTGGAGATaGTGTCCTTTGTCCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: IFKFPLNNCVIWTPKALLAALWR*CPLSNH Trigger: ATGGTTGGACAAAGGACAGCATCTCCACAATGCTGC...AAGGAGAGCTTTGGGTGTCCAGATAACACAGTTGTTTAATGGAAACTTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTAAGTTTCCATTAAACAACTGTGTTATCTGGACACCCAAAGCTCTCCTTCTAGTTCAAAAGCCCTaGATACAGGGCACAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: IFKFPLNNCVIWTPKALLLVQKP*IQGTKA Trigger: AGCTTTTGTGCCCTGTATTCAGGGCTTTTGAACTAG...AAGGAGAGCTTTGGGTGTCCAGATAACACAGTTGTTTAATGGAAACTTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR GCA 90 bp | AAAAACACTTTGCAGGCCAGATCCTTTATTTCTCTTTGTACATTAGGCCATGAACAACTTGACTGTGTATaGAACATGTCTGTGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: KNTLQARSFISLCTLGHEQLDCV*NMSVLL Trigger: AAGGAGCACAGACATGTTGCATACACAGTCAAGTTG...TTCATGGCCTAATGTACAAAGAGAAATAAAGGATCTGGCCTGCAAAGTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTAAGTTTCCATTAAACAACTGTGTTATCTGGACACCCAAAGCTCTCCTTGAAGCAGTACACATTTaGTCTCCCATGAAGTTAACT | + |
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Preference number: 2 (lower is better) Translates to: IFKFPLNNCVIWTPKALLEAVHI*SPMKLT Trigger: AGTTAACTTCATGGGAGACCAAATGTGTACTGCTTC...AAGGAGAGCTTTGGGTGTCCAGATAACACAGTTGTTTAATGGAAACTTAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTAAGTTTCCATTAAACAACTGTGTTATCTGGACACCCAAAGCTCTCCTTTTTTTATTTAGCTTATaGTCTGGGGAACTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: IFKFPLNNCVIWTPKALLFLFSL*SGELVP Trigger: AGGGACAAGTTCCCCAGACCATAAGCTAAATAAAAA...AAGGAGAGCTTTGGGTGTCCAGATAACACAGTTGTTTAATGGAAACTTAAAAAT 36% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR CCA 72 bp | CTGTGTATGCAACATGTCTGTGCTCCTTGCTTAAGATaGAGTCTGGCTCCTCCTCAGCTGCATTCCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: LCMQHVCAPCLR*SLAPPQLHSWA Trigger: GGCCCAGGAATGCAGCTGAGGAGGAGCCAGACTCCATCTTAAGCAAGGAGCACAGACATGTTGCATACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CAA 90 bp | GGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGACTTCAGGCGCCCTTCTCTTaGGCTTCTCGTTCTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: GVENLPTRQSKGLQEMRLQAPFS*ASRSPS Trigger: TGAAGGAGAACGAGAAGCCAAAGAGAAGGGCGCCTG...AAGTCTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CAA 90 bp | TGTCCCTCTCAGTTTGGTGCATGTTTAAAGAGACTCCCAGTAAGTGGTCAGGGGACATGTCTGTGCTCCTaGCTTAAGATGGAGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: CPSQFGACLKRLPVSGQGTCLCS*LKMESG Trigger: GCCAGACTCCATCTTAAGCAAGGAGCACAGACATGT...CCCCTGACCACTTACTGGGAGTCTCTTTAAACATGCACCAAACTGAGAGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR GCA 72 bp | CTGAGTTCCAACTTGACTGTGTATGCAACATGTCTGTaGTCCTTGCTTAAGATGGAGTCTGGCTCCTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: LSSNLTVYATCL*SLLKMESGSSS Trigger: TGAGGAGGAGCCAGACTCCATCTTAAGCAAGGAGCACAGACATGTTGCATACACAGTCAAGTTGGAACTCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR CCA 72 bp | CTGGTGAAGGTTAAAAGCCCTGAAGCAGTACACATTTaGTCTCCCATGAAGTTAACTGGTCTTATCAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: LVKVKSPEAVHI*SPMKLTGLIKG Trigger: GCCCTTGATAAGACCAGTTAACTTCATGGGAGACCAAATGTGTACTGCTTCAGGGCTTTTAACCTTCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR CCA 72 bp | ACACACACACTCATTCACACCTTTAGAGAAGAACCCTaGCTAACACAAGGGATAAAAATGCCACCACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: THTLIHTFREEP*LTQGIKMPPQA Trigger: AGCCTGTGGTGGCATTTTTATCCCTTGTGTTAGCCAGGGTTCTTCTCTAAAGGTGTGAATGAGTGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| 3UTR TCA 72 bp | TTTTTCAGCAAGGGCTCTTCCCAACCTGTAAGCCCCTaGTGCAATTATACAAAGGTTGGCAAACATCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: FFSKGSSQPVSP*CNYTKVGKHPF Trigger: GAAAGGATGTTTGCCAACCTTTGTATAATTGCATCAGGGGCTTACAGGTTGGGAAGAGCCCTTGCTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR CCA 72 bp | TCAGTTTGGTGCATGTTTAAAGAGACTCCCAGTAAGTaGTCAGGGGTGCTTTTTGCATTAAAGTTGCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: SVWCMFKETPSK*SGVLFALKLQY Trigger: ATACTGCAACTTTAATGCAAAAAGCACCCCTGACCACTTACTGGGAGTCTCTTTAAACATGCACCAAACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CAA 90 bp | ATTTTTAAGTTTCCATTAAACAACTGTGTTATCTGGACACCCAAAGCTCTCCTTTGGAGATGCTGTCCTTaGTCCAACCATGAGGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: IFKFPLNNCVIWTPKALLWRCCP*SNHEED Trigger: ATCTTCCTCATGGTTGGACAAAGGACAGCATCTCCA...AAGGAGAGCTTTGGGTGTCCAGATAACACAGTTGTTTAATGGAAACTTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR-3UTR CAA 90 bp | TTATACAAAGGTTGGCAAACATCCTTTCATAACTACTTTGCAATTCCTAACACCTTCTTAGCCAGAATCTaGCCCTTAACCTCCTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: LYKGWQTSFHNYFAIPNTFLARI*PLTSLF Trigger: AAACAAGGAGGTTAAGGGCAAGATTCTGGCTAAGAA...GGTGTTAGGAATTGCAAAGTAGTTATGAAAGGATGTTTGCCAACCTTTGTATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR TCA 90 bp | GGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGACTTTCTGGGAGGAGTCCATaGTGCGGCGGAACCGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GVENLPTRQSKGLQEMRLSGRSP*CGGTVQ Trigger: TTGGACGGTTCCGCCGCATCATGGACTCCTCCCAGA...AAGTCTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR CCA 90 bp | TTGCTTAAGATGGAGTCTGGCTCCTCCTCAGCTGCATTCCTGGGCCAAAAGCCTAGCGCCCGACTCCACTaGGAAATACGCCTCGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LLKMESGSSSAAFLGQKPSARLH*EIRLGH Trigger: ATGTCCGAGGCGTATTTCCCAGTGGAGTCGGGCGCT...AGGCTTTTGGCCCAGGAATGCAGCTGAGGAGGAGCCAGACTCCATCTTAAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR TCA 90 bp | AGTGGTCATAGGATACCAGGGGTGGCCAGTGGTGTGGAGAATCTGCCCACCAGACTTCTCTGCCCGATTTaGAATAAGCCCCTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SGHRIPGVASGVENLPTRLLCPI*NKPLSV Trigger: GACAGAGAGGGGCTTATTTCAAATCGGGCAGAGAAG...TCTGGTGGGCAGATTCTCCACACCACTGGCCACCCCTGGTATCCTATGACCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR GCA 90 bp | AGTGGTCATAGGATACCAGGGGTGGCCAGTGGTGTGGAGAATCTGCCCACCAGATCCGGACTGTCAAAATaGAGGAGTTGTGAGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SGHRIPGVASGVENLPTRSGLSK*RSCEPN Trigger: GTTTGGCTCACAACTCCTGCATTTTGACAGTCCGGA...TCTGGTGGGCAGATTCTCCACACCACTGGCCACCCCTGGTATCCTATGACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR TCA 90 bp | CTGGCTCCTCCTCAGCTGCATTCCTGGGCCAAAAGCCTATGCTGTGAGGCTAGCAAAATGCAGGAGTTGTaGGCCAAACCCATAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: LAPPQLHSWAKSLCCEASKMQEL*AKPIEM Trigger: CATTTCTATGGGTTTGGCTCACAACTCCTGCATTTT...GCTAGCCTCACAGCATAGGCTTTTGGCCCAGGAATGCAGCTGAGGAGGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR GCA 90 bp | GCTAACACAAGGGATAAAAATGCCACCACAGGCTCCCAAGATATGTACAGCCCAACCGGCAGCTTCTCCTaGGACATCAGGATGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: ANTRDKNATTGSQDMYSPTGSFS*DIRMSS Trigger: GGACGACATCCTGATGTCGCAGGAGAAGCTGCCGGT...TGGGCTGTACATATCTTGGGAGCCTGTGGTGGCATTTTTATCCCTTGTGTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR CCA 90 bp | TTTAGAGAAGAACCCTGGCTAACACAAGGGATAAAAATGCCACCACAGGCTCCCAGCGCCCGACTCCACTaGGAAATACGCCTCGGACAT | + |
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Preference number: 4 (lower is better) Translates to: FREEPWLTQGIKMPPQAPSARLH*EIRLGH Trigger: ATGTCCGAGGCGTATTTCCCAGTGGAGTCGGGCGCT...GGGAGCCTGTGGTGGCATTTTTATCCCTTGTGTTAGCCAGGGTTCTTCTCTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR GCA 90 bp | AGTGGTCATAGGATACCAGGGGTGGCCAGTGGTGTGGAGAATCTGCCCACCAGAAGACTGGGAAATATCTaGATTCTCCGGACTGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SGHRIPGVASGVENLPTRRLGNI*ILRTVK Trigger: TTTGACAGTCCGGAGAATGCAGATATTTCCCAGTCT...TCTGGTGGGCAGATTCTCCACACCACTGGCCACCCCTGGTATCCTATGACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR CCA 90 bp | CAGAAGACCAACAGGGTCATGGGCAACCACATCCGCCCCAACCAGGTAGTTCCACCTCTTGGTACATTTTaGGAAGTTCCACAGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKTNRVMGNHIRPNQVVPPLGTF*EVPQKG Trigger: TCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGG...TGGAACTACCTGGTTGGGGCGGATGTGGTTGCCCATGACCCTGTTGGTCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR CCA 90 bp | TTGCTTAAGATGGAGTCTGGCTCCTCCTCAGCTGCATTCCTGGGCCAAAAGCCTGTCTTCAGCAGAGACTaGGAAATATCTGCATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLKMESGSSSAAFLGQKPVFSRD*EISAFS Trigger: GGAGAATGCAGATATTTCCCAGTCTCTGCTGAAGAC...AGGCTTTTGGCCCAGGAATGCAGCTGAGGAGGAGCCAGACTCCATCTTAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| 3UTR CAA 72 bp | TCCAACTTGACTGTGTATGCAACATGTCTGTGCTCCTaGCTTAAGATGGAGTCTGGCTCCTCCTCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SNLTVYATCLCS*LKMESGSSSAA Trigger: TGCAGCTGAGGAGGAGCCAGACTCCATCTTAAGCAAGGAGCACAGACATGTTGCATACACAGTCAAGTTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR GCA 90 bp | TCCAGCTCTAAGTCCCCATGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCCACAGAAAGGATaGGCCGCTTGTGGTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSSKSPCILSLSLSLSLSVPQKG*AACGQR Trigger: TCTTTGACCACAAGCGGCGCATCCTTTCTGTGGAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATACATGGGGACTTAGAGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR GCA 90 bp | GGTGTGGAGAATCTGCCCACCAGACAATCCAAAGGGCTCCAGGAAATGAGACTTCACGACATTAGCATCTaGACTGAATACAGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVENLPTRQSKGLQEMRLHDISI*TEYSPP Trigger: TGGAGGACTGTATTCAGTGCAGATGCTAATGTCGTG...AAGTCTCATTTCCTGGAGCCCTTTGGATTGTCTGGTGGGCAGATTCTCCACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR GCA 90 bp | AGAGAAGAACCCTGGCTAACACAAGGGATAAAAATGCCACCACAGGCTCCCAAGTCCGGACTGTCAAAATaGAGGAGTTGTGAGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: REEPWLTQGIKMPPQAPKSGLSK*RSCEPN Trigger: GTTTGGCTCACAACTCCTGCATTTTGACAGTCCGGA...CTTGGGAGCCTGTGGTGGCATTTTTATCCCTTGTGTTAGCCAGGGTTCTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR CCA 90 bp | TGTCCCTCTCAGTTTGGTGCATGTTTAAAGAGACTCCCAGTAAGTGGTCAGGGGGTCCTCCATCCCTCTTaGTACATTTTGGGAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CPSQFGACLKRLPVSGQGVLHPS*YILGSS Trigger: GGAACTTCCCAAAATGTACCAAGAGGGATGGAGGAC...CCCCTGACCACTTACTGGGAGTCTCTTTAAACATGCACCAAACTGAGAGGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR TCA 90 bp | TGTCCCTCTCAGTTTGGTGCATGTTTAAAGAGACTCCCAGTAAGTGGTCAGGGGCTGGAAGCTGTAATCTaGGAAGCTTGTCCTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CPSQFGACLKRLPVSGQGLEAVI*EACPFS Trigger: GGAAAAAGGACAAGCTTCTCAGATTACAGCTTCCAG...CCCCTGACCACTTACTGGGAGTCTCTTTAAACATGCACCAAACTGAGAGGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR CCA 90 bp | GTCCCCATGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACCTTCAGCAGAGACTaGGAAATATCTGCATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VPMYSLSLSLSLSLSLTHTFSRD*EISAFS Trigger: GGAGAATGCAGATATTTCCCAGTCTCTGCTGAAGGT...GTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATACATGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTAAGTCCCCATGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAATGCAGGAGTTGTaGGCCAAACCCATAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: SSKSPCILSLSLSLSLSLKMQEL*AKPIEM Trigger: CATTTCTATGGGTTTGGCTCACAACTCCTGCATTTT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATACATGGGGACTTAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR GCA 90 bp | AAAAACACTTTGCAGGCCAGATCCTTTATTTCTCTTTGTACATTAGGCCATGAAACCGGCAGCTTCTCCTaGGACATCAGGATGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: KNTLQARSFISLCTLGHETGSFS*DIRMSS Trigger: GGACGACATCCTGATGTCGCAGGAGAAGCTGCCGGT...TTCATGGCCTAATGTACAAAGAGAAATAAAGGATCTGGCCTGCAAAGTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR GCA 90 bp | CAACTCTCCAGCTCTAAGTCCCCATGTATTCTCTCTCTCTCTCTCTCTCTCTCTAGACTGGGAAATATCTaGATTCTCCGGACTGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QLSSSKSPCILSLSLSLSRLGNI*ILRTVK Trigger: TTTGACAGTCCGGAGAATGCAGATATTTCCCAGTCT...AGAGAGAGAGAGAGAGAGAGAGAGAATACATGGGGACTTAGAGCTGGAGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR CCA 90 bp | CTAAGTCCCCATGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCTTGGTACATTTTaGGAAGTTCCACAGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSPHVFSLSLSLSLSLSHPLGTF*EVPQKG Trigger: TCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGG...GTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATACATGGGGACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR TCA 90 bp | AAAAACACTTTGCAGGCCAGATCCTTTATTTCTCTTTGTACATTAGGCCATGAACCTGGCTACCAGCGCTaGAGTGTCTTCATTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: KNTLQARSFISLCTLGHEPGYQR*SVFIVR Trigger: TCTTACAATGAAGACACTTCAGCGCTGGTAGCCAGG...TTCATGGCCTAATGTACAAAGAGAAATAAAGGATCTGGCCTGCAAAGTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR GCA 90 bp | AAAAACACTTTGCAGGCCAGATCCTTTATTTCTCTTTGTACATTAGGCCATGAAGTTCCACAGAAAGGATaGGCCGCTTGTGGTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KNTLQARSFISLCTLGHEVPQKG*AACGQR Trigger: TCTTTGACCACAAGCGGCGCATCCTTTCTGTGGAAC...TTCATGGCCTAATGTACAAAGAGAAATAAAGGATCTGGCCTGCAAAGTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR TCA 90 bp | ATTTTTAAGTTTCCATTAAACAACTGTGTTATCTGGACACCCAAAGCTCTCCTTCCTTTTTCCCAACTCTaGAAGTCATTTAGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: IFKFPLNNCVIWTPKALLPFSQL*KSFRLL Trigger: GAGAAGTCTAAATGACTTTCAGAGTTGGGAAAAAGG...AAGGAGAGCTTTGGGTGTCCAGATAACACAGTTGTTTAATGGAAACTTAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS CCA 90 bp | CGGAGCCCGCGCCCCGCTCCAGGAAGAAGGCTCCCAGGCGCGGCATaGGCGTCTCGACCCGCACCGGCAGCTTCTCCTGCGACATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RSPRPAPGRRLPGAA*ASRPAPAASPATSG Trigger: TCCTGATGTCGCAGGAGAAGCTGCCGGTGCGGGTCGAGACGCCCATGCCGCGCCTGGGAGCCTTCTTCCTGGAGCGGGGCGCGGGCTCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS GCA 90 bp | CCCAGGCGCGGCATGGGCGTCTCGACCCGCACCGGCAGCTTCTCCTaGGACATCAGGATGTCGTCCAAAGACAGGAAGTTCTCCTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: PRRGMGVSTRTGSFS*DIRMSSKDRKFSSG Trigger: GCCGGAGGAGAACTTCCTGTCTTTGGACGACATCCTGATGTCGCAGGAGAAGCTGCCGGTGCGGGTCGAGACGCCCATGCCGCGCCTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS-3UTR CAA 90 bp | CCAAAAGCCTATGCTGTGAGGCTAGCAGGTAGCTACAGTCCAGAAGACCAACAGAAATGGGGCCCCATTTaGTGGAGGTCCACGACATTA | + |
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Preference number: 5 (lower is better) Translates to: PKAYAVRLAGSYSPEDQQKWGPI*WRSTTL Trigger: TAATGTCGTGGACCTCCACAAAATGGGGCCCCATTT...CTGTTGGTCTTCTGGACTGTAGCTACCTGCTAGCCTCACAGCATAGGCTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS CCA 90 bp | TCCACGACATTAGCATCTGCACTGAATACAGTCCTCCATCCCTCTTaGTACATTTTGGGAAGTTCCACAGAAAGGATGCGCCGCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: STTLASALNTVLHPS*YILGSSTERMRRLW Trigger: CCACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGGATGGAGGACTGTATTCAGTGCAGATGCTAATGTCGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGTTTGGTGCATGTTTAAAGAGACTCCCAGTAAGTGGTCAGGGGTGCTTTGGGGAAGTTCAAGTTTaGTACCCTGAGGGAGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: SQFGACLKRLPVSGQGCFGEVQV*YPEGAD Trigger: ATCCGCTCCCTCAGGGTACAAAACTTGAACTTCCCC...AAAGCACCCCTGACCACTTACTGGGAGTCTCTTTAAACATGCACCAAACTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR CAA 90 bp | ACCTTTAGAGAAGAACCCTGGCTAACACAAGGGATAAAAATGCCACCACAGGCTGGGGAAGTTCAAGTTTaGTACCCTGAGGGAGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: TFREEPWLTQGIKMPPQAGEVQV*YPEGAD Trigger: ATCCGCTCCCTCAGGGTACAAAACTTGAACTTCCCC...AGCCTGTGGTGGCATTTTTATCCCTTGTGTTAGCCAGGGTTCTTCTCTAAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCTCTCAGTTTGGTGCATGTTTAAAGAGACTCCCAGTAAGTGGTCAGGGGCCCTCTTGGTACATTTaGGGAAGTTCCACAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: CPSQFGACLKRLPVSGQGPSWYI*GSSTER Trigger: CCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGG...CCCCTGACCACTTACTGGGAGTCTCTTTAAACATGCACCAAACTGAGAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS CCA 90 bp | TCTTGGTACATTTTGGGAAGTTCCACAGAAAGGATGCGCCGCTTGTaGTCAAAGAGTCCTTTAGCCAGCCACAGGGGAAGTTCAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SWYILGSSTERMRRL*SKSPLASHRGSSSF Trigger: AAAACTTGAACTTCCCCTGTGGCTGGCTAAAGGACTCTTTGACCACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CCA 90 bp | TTCTCTGCCCGATTTGAAATAAGCCCCTCTCTGTCTCATCTAACCTaGCTACCAGCGCTGAAGTGTCTTCATTGTAAGAATTCTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FSARFEISPSLSHLT*LPALKCLHCKNSGR Trigger: CCTCCCAGAATTCTTACAATGAAGACACTTCAGCGCTGGTAGCCAGGTTAGATGAGACAGAGAGGGGCTTATTTCAAATCGGGCAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS-3UTR CAA 90 bp | GCTAACACAAGGGATAAAAATGCCACCACAGGCTCCCAAGATATGTACAGCCCACCCTCTTGGTACATTTaGGGAAGTTCCACAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: ANTRDKNATTGSQDMYSPPSWYI*GSSTER Trigger: CCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGG...TGGGCTGTACATATCTTGGGAGCCTGTGGTGGCATTTTTATCCCTTGTGTTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212434.2 |
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| CDS-3UTR CAA 90 bp | ATGGTCTGGGGAACTTGTCCCTCTCAGTTTGGTGCATGTTTAAAGAGACTCCCATGTAATCTGAGAAGCTaGTCCTTTTTCCCAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: MVWGTCPSQFGACLKRLPCNLRS*SFFPTL Trigger: CAGAGTTGGGAAAAAGGACAAGCTTCTCAGATTACA...TGGGAGTCTCTTTAAACATGCACCAAACTGAGAGGGACAAGTTCCCCAGACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS CCA 72 bp | CGCCCCGCTCCAGGAAGAAGGCTCCCAGGCGCGGCATaGGCGTCTCGACCCGCACCGGCAGCTTCTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RPAPGRRLPGAA*ASRPAPAASPA Trigger: CGCAGGAGAAGCTGCCGGTGCGGGTCGAGACGCCCATGCCGCGCCTGGGAGCCTTCTTCCTGGAGCGGGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS GCA 72 bp | GGCATGGGCGTCTCGACCCGCACCGGCAGCTTCTCCTaGGACATCAGGATGTCGTCCAAAGACAGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GMGVSTRTGSFS*DIRMSSKDRKF Trigger: GAACTTCCTGTCTTTGGACGACATCCTGATGTCGCAGGAGAAGCTGCCGGTGCGGGTCGAGACGCCCATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CAA 90 bp | CCCTCTTGGTACATTTTGGGAAGTTCCACAGAAAGGATGCGCCGCTaGTGGTCAAAGAGTCCTTTAGCCAGCCACAGGGGAAGTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: PSWYILGSSTERMRR*WSKSPLASHRGSSS Trigger: ACTTGAACTTCCCCTGTGGCTGGCTAAAGGACTCTTTGACCACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS GCA 72 bp | GGGCCCCATTTTGTGGAGGTCCACGACATTAGCATCTaGACTGAATACAGTCCTCCATCCCTCTTGGTACAT | + |
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Preference number: 6 (lower is better) Translates to: GPHFVEVHDISI*TEYSPPSLLVH Trigger: ATGTACCAAGAGGGATGGAGGACTGTATTCAGTGCAGATGCTAATGTCGTGGACCTCCACAAAATGGGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CCA 72 bp | ATTTTGGGAAGTTCCACAGAAAGGATGCGCCGCTTGTaGTCAAAGAGTCCTTTAGCCAGCCACAGGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ILGSSTERMRRL*SKSPLASHRGS Trigger: ACTTCCCCTGTGGCTGGCTAAAGGACTCTTTGACCACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CAA 72 bp | TACATTTTGGGAAGTTCCACAGAAAGGATGCGCCGCTaGTGGTCAAAGAGTCCTTTAGCCAGCCACAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: YILGSSTERMRR*WSKSPLASHRG Trigger: TCCCCTGTGGCTGGCTAAAGGACTCTTTGACCACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CAA 72 bp | GCACTGAATACAGTCCTCCATCCCTCTTGGTACATTTaGGGAAGTTCCACAGAAAGGATGCGCCGCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: ALNTVLHPSWYI*GSSTERMRRLW Trigger: CCACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGGATGGAGGACTGTATTCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CAA 90 bp | GTCCACGACATTAGCATCTGCACTGAATACAGTCCTCCATCCCTCTaGGTACATTTTGGGAAGTTCCACAGAAAGGATGCGCCGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: VHDISICTEYSPPSL*VHFGKFHRKDAPLV Trigger: CACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGGATGGAGGACTGTATTCAGTGCAGATGCTAATGTCGTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CCA 72 bp | CGGCGGAACCGTCCAATAAAAGTCTTCAGCAGAGACTaGGAAATATCTGCATTCTCCGGACTGTCAAAATGC | + |
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Preference number: 6 (lower is better) Translates to: RRNRPIKVFSRD*EISAFSGLSKC Trigger: GCATTTTGACAGTCCGGAGAATGCAGATATTTCCCAGTCTCTGCTGAAGACTTTTATTGGACGGTTCCGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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| CDS CAA 90 bp | TTAGCATCTGCACTGAATACAGTCCTCCATCCCTCTTGGTACATTTaGGGAAGTTCCACAGAAAGGATGCGCCGCTTGTGGTCAAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LASALNTVLHPSWYI*GSSTERMRRLWSKS Trigger: ACTCTTTGACCACAAGCGGCGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGGATGGAGGACTGTATTCAGTGCAGATGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CCA 72 bp | TTAGCATCTGCACTGAATACAGTCCTCCATCCCTCTTaGTACATTTTGGGAAGTTCCACAGAAAGGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: LASALNTVLHPS*YILGSSTERMR Trigger: GCGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGGATGGAGGACTGTATTCAGTGCAGATGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CAA 72 bp | ATTAGCATCTGCACTGAATACAGTCCTCCATCCCTCTaGGTACATTTTGGGAAGTTCCACAGAAAGGATGCG | + |
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Preference number: 6 (lower is better) Translates to: ISICTEYSPPSL*VHFGKFHRKDA Trigger: CGCATCCTTTCTGTGGAACTTCCCAAAATGTACCAAGAGGGATGGAGGACTGTATTCAGTGCAGATGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034094.11 ENSMUST00000212434.2 |
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| CDS CCA 72 bp | CGATTTGAAATAAGCCCCTCTCTGTCTCATCTAACCTaGCTACCAGCGCTGAAGTGTCTTCATTGTAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RFEISPSLSHLT*LPALKCLHCKN Trigger: ATTCTTACAATGAAGACACTTCAGCGCTGGTAGCCAGGTTAGATGAGACAGAGAGGGGCTTATTTCAAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034094.11 |
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