Pregenerated sensors for GINS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031821Ensembl transcript IDs: ENSMUST00000034278.6
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGTTCCGTACTTGTGTGTGCCCTACGCCTCACTGCTGGGGCCCTaGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCT | + |
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Preference number: 1 (lower is better) Translates to: LVPYLCVPYASLLGP*TQTQAGGPTGASVA Trigger: AGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGGGCCCCAGCAGTGAGGCGTAGGGCACACACAAGTACGGAACCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CCA 90 bp | GCATCTCACTGGTTCCGTACTTGTGTGTGCCCTACGCCTCACTGCTaGGGCCCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: ASHWFRTCVCPTPHC*GPGPRPRQEGRRVP Trigger: AGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGGGCCCCAGCAGTGAGGCGTAGGGCACACACAAGTACGGAACCAGTGAGATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | TTGTGCAGTGTCCCACACAGCAGGGCTGAGGGGCCTAGGGCTGCCTaGTCTCCAAAGCAGATGACCCATGTGCGGCAGGGACTCGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LCSVPHSRAEGPRAA*SPKQMTHVRQGLGK Trigger: TTTGCCGAGTCCCTGCCGCACATGGGTCATCTGCTTTGGAGAGCAGGCAGCCCTAGGCCCCTCAGCCCTGCTGTGTGGGACACTGCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR TCA 90 bp | CAAGCGATGCCCTCCCAGGTCAGTCTGGGGCACAAGCTGAGCCGCTaGCTAGCAATGCCTACAGCCTTTCCCAATGCCCTTGCCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: QAMPSQVSLGHKLSR*LAMPTAFPNALACP Trigger: AGGGCAGGCAAGGGCATTGGGAAAGGCTGTAGGCATTGCTAGTCAGCGGCTCAGCTTGTGCCCCAGACTGACCTGGGAGGGCATCGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CCA 90 bp | TTTAACCTCTTCCTGCCAGGAGCGGGACTAATGCGCCGGGAAGGCTaGGTGCGTACAAGCAAAGGGCTCCCCATCAGTCCCGTCCGTCTG | + |
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Preference number: 1 (lower is better) Translates to: FNLFLPGAGLMRREG*VRTSKGLPISPVRL Trigger: CAGACGGACGGGACTGATGGGGAGCCCTTTGCTTGTACGCACCCAGCCTTCCCGGCGCATTAGTCCCGCTCCTGGCAGGAAGAGGTTAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | CCCGTCCGTCTGTCGCCTTCCCGCAAGCGTCATCATCGAAGCCACTaGTCCTGGGAGCACACAAGCTTCTCCCTGGAACAGCTCTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: PVRLSPSRKRHHRSH*SWEHTSFSLEQLLG Trigger: TCCTAAGAGCTGTTCCAGGGAGAAGCTTGTGTGCTCCCAGGAGCAGTGGCTTCGATGATGACGCTTGCGGGAAGGCGACAGACGGACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | CCAAGCTTGAAGACACTTGAGCTGAGCTGGCCCGAACACTCGCTGTaGTTGGCGTGCAGTCCTTGGGTGGAAGAGAAAGGCTGGCGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PSLKTLELSWPEHSL*LACSPWVEEKGWRL Trigger: AAGCCGCCAGCCTTTCTCTTCCACCCAAGGACTGCACGCCAAGCACAGCGAGTGTTCGGGCCAGCTCAGCTCAAGTGTCTTCAAGCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | ACCCTGGGCCGAGTCCTGCCCGACTTCCCAGTTAAATGCTGCTTGTaGCCAGTGCTGCTTTCCCAAGCTCACCCCACCTCCATGACTAGA | + |
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Preference number: 1 (lower is better) Translates to: TLGRVLPDFPVKCCL*PVLLSQAHPTSMTR Trigger: TCTAGTCATGGAGGTGGGGTGAGCTTGGGAAAGCAGCACTGGGCACAAGCAGCATTTAACTGGGAAGTCGGGCAGGACTCGGCCCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | AAGACACTTGAGCTGAGCTGGCCCGAACACTCGCTGTGCTTGGCGTaGAGTCCTTGGGTGGAAGAGAAAGGCTGGCGGCTTCTCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: KTLELSWPEHSLCLA*SPWVEEKGWRLLCS Trigger: TGAACAGAGAAGCCGCCAGCCTTTCTCTTCCACCCAAGGACTGCACGCCAAGCACAGCGAGTGTTCGGGCCAGCTCAGCTCAAGTGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | AATGTTGTTAACTGCTCAGTTCTAGGAAGCAGGAGAGCTCGCTTGTaGAGTGTCCCACACAGCAGGGCTGAGGGGCCTAGGGCTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: NVVNCSVLGSRRARL*SVPHSRAEGPRAAC Trigger: GCAGGCAGCCCTAGGCCCCTCAGCCCTGCTGTGTGGGACACTGCACAAGCGAGCTCTCCTGCTTCCTAGAACTGAGCAGTTAACAACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CCA 90 bp | ACCATGTCTCCCACTCCACCTGCAAGTGATTGCTGCCATCTGTCCTaGGTGGGATGCACCGAGCTAGTCACGGGTGTCGGATCAGATCTT | + |
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Preference number: 1 (lower is better) Translates to: TMSPTPPASDCCHLS*VGCTELVTGVGSDL Trigger: AAGATCTGATCCGACACCCGTGACTAGCTCGGTGCATCCCACCCAGGACAGATGGCAGCAATCACTTGCAGGTGGAGTGGGAGACATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR TCA 90 bp | ACCCTAACAGTGGGGGCAGGGAGGGTACAGCCAGGCTCACAGCACTaGGAGTCTCAACCAGCTAAGCTAAATTGCAAGCTAGATGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: TLTVGAGRVQPGSQH*ESQPAKLNCKLDAS Trigger: GGAGGCATCTAGCTTGCAATTTAGCTTAGCTGGTTGAGACTCTCAGTGCTGTGAGCCTGGCTGTACCCTCCCTGCCCCCACTGTTAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | CCCACTCCACCTGCAAGTGATTGCTGCCATCTGTCCTGGGTGGGATaGACCGAGCTAGTCACGGGTGTCGGATCAGATCTTTTAAAAACA | + |
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Preference number: 1 (lower is better) Translates to: PTPPASDCCHLSWVG*TELVTGVGSDLLKT Trigger: TGTTTTTAAAAGATCTGATCCGACACCCGTGACTAGCTCGGTGCATCCCACCCAGGACAGATGGCAGCAATCACTTGCAGGTGGAGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CCA 90 bp | AATGCCCTTGCCTGCCCTGGAGCTTCTAGGGCCACCTCTAGCATCTaGAGACCGAATATCCCCATGCTCAGAAGTAAAGTGACAATCAGA | + |
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Preference number: 1 (lower is better) Translates to: NALACPGASRATSSI*RPNIPMLRSKVTIR Trigger: TCTGATTGTCACTTTACTTCTGAGCATGGGGATATTCGGTCTCCAGATGCTAGAGGTGGCCCTAGAAGCTCCAGGGCAGGCAAGGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | AGCAGTCTGTACTCTTTCAAGTACGCAAGCTTTGACTTCACTACTTaGTGTAGCCTGTCCCCACTGTCTATCCAGTGCTTACTTCAACCC | + |
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Preference number: 1 (lower is better) Translates to: SSLYSFKYASFDFTT*CSLSPLSIQCLLQP Trigger: GGGTTGAAGTAAGCACTGGATAGACAGTGGGGACAGGCTACAGCAAGTAGTGAAGTCAAAGCTTGCGTACTTGAAAGAGTACAGACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 90 bp | CTTGCTTTTAGTGTTTGTACTGCTGCTGGTCAGAATGTTGTTAACTaGTCAGTTCTAGGAAGCAGGAGAGCTCGCTTGTGCAGTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: LAFSVCTAAGQNVVN*SVLGSRRARLCSVP Trigger: TGGGACACTGCACAAGCGAGCTCTCCTGCTTCCTAGAACTGAGCAGTTAACAACATTCTGACCAGCAGCAGTACAAACACTAAAAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCTCTGGGGGTTGGCGTGCAGTCCTTaGGTGGAAGAGAAAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PGPRPRQEGRRVPRSLWGLACSP*VEEKGW Trigger: CCAGCCTTTCTCTTCCACCCAAGGACTGCACGCCAA...CCCCCAGAGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CAA 90 bp | CTAGAGGCTGCCTTGACCCGAGGAGGCATCTCACTGGTTCCGTACTaGTGTGTGCCCTACGCCTCACTGCTGGGGCCCTGGACCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: LEAALTRGGISLVPY*CVPYASLLGPWTQT Trigger: GGTCTGGGTCCAGGGCCCCAGCAGTGAGGCGTAGGGCACACACAAGTACGGAACCAGTGAGATGCCTCCTCGGGTCAAGGCAGCCTCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCGGAGACAGGCACAGCTCTGGCAGAAAGCTCAACGCTAAGGGATCTCCTGCCCCTGCCCTCAGCTaGCCAGGCCCCAGCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSGDRHSSGRKLNAKGSPAPALS*PGPSME Trigger: CTCCATGCTGGGGCCTGGGCAGCTGAGGGCAGGGGC...AGGAGATCCCTTAGCGTTGAGCTTTCTGCCAGAGCTGTGCCTGTCTCCGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CAA 90 bp | AGCTTGAAGACACTTGAGCTGAGCTGGCCCGAACACTCGCTGTGCTaGGCGTGCAGTCCTTGGGTGGAAGAGAAAGGCTGGCGGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SLKTLELSWPEHSLC*ACSPWVEEKGWRLL Trigger: GAGAAGCCGCCAGCCTTTCTCTTCCACCCAAGGACTGCACGCCAAGCACAGCGAGTGTTCGGGCCAGCTCAGCTCAAGTGTCTTCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCATTGTCCCACAGGAGTTCCTCTGGCTGAGTATGCCATCCAGAGCAAGCCCCAATGCCCTTGCCTaGCCTGGAGCTTCTAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PSIVPQEFLWLSMPSRASPNALA*PGASRA Trigger: GGCCCTAGAAGCTCCAGGGCAGGCAAGGGCATTGGG...GCTTGCTCTGGATGGCATACTCAGCCAGAGGAACTCCTGTGGGACAATGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | CTGACGTCCACCGTGCATGTGGCTGAGGGAGAGAGCCAGCTGGTTGTTTCTGGTTACAGCCTTTCCCAATaGCCTTGCCTGCCCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LTSTVHVAEGESQLVVSGYSLSQ*PCLPWS Trigger: GCTCCAGGGCAGGCAAGGGCATTGGGAAAGGCTGTA...ACCAGAAACAACCAGCTGGCTCTCTCCCTCAGCCACATGCACGGTGGACGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | CGTGCCATGCATGAAACAAAGGGTTCCAGGCTCCAGAGAGGAGATCACCTCGACGCTGACATCTGTCCCTaGTCCACCCCTGCCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: RAMHETKGSRLQRGDHLDADICP*STPAPT Trigger: GGTAGGGGCAGGGGTGGAGCAGGGACAGATGTCAGC...GTCGAGGTGATCTCCTCTCTGGAGCCTGGAACCCTTTGTTTCATGCATGGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCGGAGACAGGCACAGCTCTGGCAGAAAGCTCAACGCTAAGGGATCTCCTAGCATGGAGATGGCCTaGACAGCAGGCTCAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: SSGDRHSSGRKLNAKGSPSMEMA*TAGSAP Trigger: AGGTGCTGAGCCTGCTGTGCAGGCCATCTCCATGCT...AGGAGATCCCTTAGCGTTGAGCTTTCTGCCAGAGCTGTGCCTGTCTCCGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR TCA 90 bp | CGTGCCATGCATGAAACAAAGGGTTCCAGGCTCCAGAGAGGAGATCACCTCGACCCAGGCTCACAGCACTaGGAGTCTCAACCAGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: RAMHETKGSRLQRGDHLDPGSQH*ESQPAK Trigger: CTTAGCTGGTTGAGACTCTCAGTGCTGTGAGCCTGG...GTCGAGGTGATCTCCTCTCTGGAGCCTGGAACCCTTTGTTTCATGCATGGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGCCATCTGTCCTGGGTGGGATGCACCGAGCTAGTCACGGGTGTCGGATCTCTGTTCAATGGAGTTaGACTTGCAGTATGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LLPSVLGGMHRASHGCRISVQWS*TCSMAD Trigger: GTCAGCCATACTGCAAGTTCAACTCCATTGAACAGA...GATCCGACACCCGTGACTAGCTCGGTGCATCCCACCCAGGACAGATGGCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | CTGACGTCCACCGTGCATGTGGCTGAGGGAGAGAGCCAGCTGGTTGTTTCTGGTGTTAAATGCTGCTTGTaGCCAGTGCTGCTTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LTSTVHVAEGESQLVVSGVKCCL*PVLLSQ Trigger: TTGGGAAAGCAGCACTGGGCACAAGCAGCATTTAAC...ACCAGAAACAACCAGCTGGCTCTCTCCCTCAGCCACATGCACGGTGGACGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCGGAGACAGGCACAGCTCTGGCAGAAAGCTCAACGCTAAGGGATCTCCTGACTTCCCAGTTAAATaGTGCTTGTGCCCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SSGDRHSSGRKLNAKGSPDFPVK*CLCPVL Trigger: CAGCACTGGGCACAAGCAGCATTTAACTGGGAAGTC...AGGAGATCCCTTAGCGTTGAGCTTTCTGCCAGAGCTGTGCCTGTCTCCGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGCACCTGTCTCAGCTAGGACTCAGTTTCTCTTTCTGAGGTCGGCGTTATTTAAAGCTGTGAGGAGCTaGGCTCCGGAGACAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: EAPVSARTQFLFLRSALFKAVRS*APETGT Trigger: TGTGCCTGTCTCCGGAGCTCAGCTCCTCACAGCTTT...AAATAACGCCGACCTCAGAAAGAGAAACTGAGTCCTAGCTGAGACAGGTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR CCA 90 bp | GATGAGGCTAACAAGACCACAGTAGCCCCCTTCCCAGGTACCACACTGTCCCTGGTTGAACTTGCAGTATaGCTGACCTCTGACAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: DEANKTTVAPFPGTTLSLVELAV*LTSDKD Trigger: GTCTTTGTCAGAGGTCAGCCATACTGCAAGTTCAAC...CAGGGACAGTGTGGTACCTGGGAAGGGGGCTACTGTGGTCTTGTTAGCCTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGCACCTGTCTCAGCTAGGACTCAGTTTCTCTTTCTGAGGTCGGCGTTATTTCAAAGCACCTTCCTCTaGCCACAGCCAGTCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: EAPVSARTQFLFLRSALFQSTFL*PQPVRE Trigger: TTCTCTGACTGGCTGTGGGCAGAGGAAGGTGCTTTG...AAATAACGCCGACCTCAGAAAGAGAAACTGAGTCCTAGCTGAGACAGGTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR TCA 90 bp | GATGAGGCTAACAAGACCACAGTAGCCCCCTTCCCAGGTACCACACTGTCCCTGATCTGCTCTAGACTGTaGAATCAGCATGTATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: DEANKTTVAPFPGTTLSLICSRL*NQHVCE Trigger: TTCACATACATGCTGATTTCACAGTCTAGAGCAGAT...CAGGGACAGTGTGGTACCTGGGAAGGGGGCTACTGTGGTCTTGTTAGCCTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCTTCCATTGTCCCACAGGAGTTCCTCTGGCTGAGTATGCCATCCAGAGCTGGGGGCAGTTTAGATaGTGTGAAATTAAACCCGTT | + |
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Preference number: 2 (lower is better) Translates to: SPFHCPTGVPLAEYAIQSWGQFR*CEIKPV Trigger: AACGGGTTTAATTTCACAGCATCTAAACTGCCCCCA...GCTCTGGATGGCATACTCAGCCAGAGGAACTCCTGTGGGACAATGGAAGGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | CGTGCCATGCATGAAACAAAGGGTTCCAGGCTCCAGAGAGGAGATCACCTCGACCAGAATGTTGTTAACTaGTCAGTTCTAGGAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RAMHETKGSRLQRGDHLDQNVVN*SVLGSR Trigger: CCTGCTTCCTAGAACTGAGCAGTTAACAACATTCTG...GTCGAGGTGATCTCCTCTCTGGAGCCTGGAACCCTTTGTTTCATGCATGGCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAAACCTTGCTTTTAGTGTTTGTACTGCTGCTGGTCAGAATGTTGTTAACGCCCCAGCATGGAGATaGCCTGCACAGCAGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KENLAFSVCTAAGQNVVNAPAWR*PAQQAQ Trigger: CTGAGCCTGCTGTGCAGGCCATCTCCATGCTGGGGC...GTTAACAACATTCTGACCAGCAGCAGTACAAACACTAAAAGCAAGGTTTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAAACCTTGCTTTTAGTGTTTGTACTGCTGCTGGTCAGAATGTTGTTAACCCTGCAAGTGATTGCTaGCATCTGTCCTGGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: KENLAFSVCTAAGQNVVNPASDC*HLSWVG Trigger: TCCCACCCAGGACAGATGGCAGCAATCACTTGCAGG...GTTAACAACATTCTGACCAGCAGCAGTACAAACACTAAAAGCAAGGTTTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR CAA 90 bp | GACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCTCTGGGGGCAGTGAACACTCGCTGTGCTaGGCGTGCAGTCCTTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: DPDPGRRADGCLGRSGGSEHSLC*ACSPWV Trigger: CACCCAAGGACTGCACGCCAAGCACAGCGAGTGTTC...ACTGCCCCCAGAGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 72 bp | GCCCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTaGCTCGGTCGCTCTGGGGGCAGTTTAGATGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: ALDPDPGRRADG*LGRSGGSLDAV Trigger: CACAGCATCTAAACTGCCCCCAGAGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CCA 72 bp | TACTTGTGTGTGCCCTACGCCTCACTGCTGGGGCCCTaGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: YLCVPYASLLGP*TQTQAGGPTGA Trigger: GGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGGGCCCCAGCAGTGAGGCGTAGGGCACACACAAGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCTCTGGGGGTTCCACGGGCCAAGCTaGAAGACACTTGAGCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: PGPRPRQEGRRVPRSLWGFHGPS*KTLELS Trigger: GCTCAGCTCAAGTGTCTTCAAGCTTGGCCCGTGGAA...CCCCCAGAGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 72 bp | CACTGGTTCCGTACTTGTGTGTGCCCTACGCCTCACTaGTGGGGCCCTGGACCCAGACCCAGGCAGGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: HWFRTCVCPTPH*WGPGPRPRQEG Trigger: GCCCTCCTGCCTGGGTCTGGGTCCAGGGCCCCAGCAGTGAGGCGTAGGGCACACACAAGTACGGAACCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 72 bp | CCCGAGGAGGCATCTCACTGGTTCCGTACTTGTGTGTaGCCTACGCCTCACTGCTGGGGCCCTGGACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PEEASHWFRTCV*PTPHCWGPGPR Trigger: TCTGGGTCCAGGGCCCCAGCAGTGAGGCGTAGGGCACACACAAGTACGGAACCAGTGAGATGCCTCCTCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CCA 72 bp | TTCCTGCCAGGAGCGGGACTAATGCGCCGGGAAGGCTaGGTGCGTACAAGCAAAGGGCTCCCCATCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: FLPGAGLMRREG*VRTSKGLPISP Trigger: GGGACTGATGGGGAGCCCTTTGCTTGTACGCACCCAGCCTTCCCGGCGCATTAGTCCCGCTCCTGGCAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 72 bp | GAGCTGAGCTGGCCCGAACACTCGCTGTGCTTGGCGTaGAGTCCTTGGGTGGAAGAGAAAGGCTGGCGGCTT | + |
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Preference number: 3 (lower is better) Translates to: ELSWPEHSLCLA*SPWVEEKGWRL Trigger: AAGCCGCCAGCCTTTCTCTTCCACCCAAGGACTGCACGCCAAGCACAGCGAGTGTTCGGGCCAGCTCAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 72 bp | CTGGGCCGAGTCCTGCCCGACTTCCCAGTTAAATGCTaGTTGTGCCCAGTGCTGCTTTCCCAAGCTCACCCC | + |
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Preference number: 3 (lower is better) Translates to: LGRVLPDFPVKC*LCPVLLSQAHP Trigger: GGGGTGAGCTTGGGAAAGCAGCACTGGGCACAAGCAGCATTTAACTGGGAAGTCGGGCAGGACTCGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR CCA 72 bp | CCCACTCCACCTGCAAGTGATTGCTGCCATCTGTCCTaGGTGGGATGCACCGAGCTAGTCACGGGTGTCGGA | + |
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Preference number: 3 (lower is better) Translates to: PTPPASDCCHLS*VGCTELVTGVG Trigger: TCCGACACCCGTGACTAGCTCGGTGCATCCCACCCAGGACAGATGGCAGCAATCACTTGCAGGTGGAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 72 bp | ACCCTGGGCCGAGTCCTGCCCGACTTCCCAGTTAAATaGTGCTTGTGCCCAGTGCTGCTTTCCCAAGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: TLGRVLPDFPVK*CLCPVLLSQAH Trigger: GTGAGCTTGGGAAAGCAGCACTGGGCACAAGCAGCATTTAACTGGGAAGTCGGGCAGGACTCGGCCCAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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| 3UTR GCA 72 bp | CTGTCGCCTTCCCGCAAGCGTCATCATCGAAGCCACTaGTCCTGGGAGCACACAAGCTTCTCCCTGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSPSRKRHHRSH*SWEHTSFSLEQ Trigger: CTGTTCCAGGGAGAAGCTTGTGTGCTCCCAGGAGCAGTGGCTTCGATGATGACGCTTGCGGGAAGGCGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CCA 72 bp | TGGCCCGAACACTCGCTGTGCTTGGCGTGCAGTCCTTaGGTGGAAGAGAAAGGCTGGCGGCTTCTCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WPEHSLCLACSP*VEEKGWRLLCS Trigger: TGAACAGAGAAGCCGCCAGCCTTTCTCTTCCACCCAAGGACTGCACGCCAAGCACAGCGAGTGTTCGGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CCA 72 bp | TTCCACGGGCCAAGCTTGAAGACACTTGAGCTGAGCTaGCCCGAACACTCGCTGTGCTTGGCGTGCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FHGPSLKTLELS*PEHSLCLACSP Trigger: AGGACTGCACGCCAAGCACAGCGAGTGTTCGGGCCAGCTCAGCTCAAGTGTCTTCAAGCTTGGCCCGTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR TCA 72 bp | CCAGTCCTTGACCATGTCTCCCACTCCACCTGCAAGTaGTTGCTGCCATCTGTCCTGGGTGGGATGCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: PVLDHVSHSTCK*LLPSVLGGMHR Trigger: TCGGTGCATCCCACCCAGGACAGATGGCAGCAATCACTTGCAGGTGGAGTGGGAGACATGGTCAAGGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR TCA 72 bp | CAGTCCCTTCCATTGTCCCACAGGAGTTCCTCTGGCTaGGTATGCCATCCAGAGCAAGCGATGCCCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSLPLSHRSSSG*VCHPEQAMPSQ Trigger: CTGGGAGGGCATCGCTTGCTCTGGATGGCATACTCAGCCAGAGGAACTCCTGTGGGACAATGGAAGGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR TCA 72 bp | TCCTCCTCCGACACTGACGTCCACCGTGCATGTGGCTaGGGGAGAGAGCCAGCTGGTTGTTTCTGGTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSDTDVHRACG*GREPAGCFWYS Trigger: GCTATACCAGAAACAACCAGCTGGCTCTCTCCCTCAGCCACATGCACGGTGGACGTCAGTGTCGGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR GCA 72 bp | CACCCCTCTGGTTCTCAGCAAACTCAGACAAGGCAGTaGCACCAGGCCTGTCAGCAAAGCACCTTCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HPSGSQQTQTRQ*HQACQQSTFLC Trigger: GCAGAGGAAGGTGCTTTGCTGACAGGCCTGGTGGCACTGCCTTGTCTGAGTTTGCTGAGAACCAGAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CCA 72 bp | CGCACAGTCCCTTCCATTGTCCCACAGGAGTTCCTCTaGCTGAGTATGCCATCCAGAGCAAGCGATGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTVPSIVPQEFL*LSMPSRASDAL Trigger: GAGGGCATCGCTTGCTCTGGATGGCATACTCAGCCAGAGGAACTCCTGTGGGACAATGGAAGGGACTGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR GCA 72 bp | CCTGCAAGTGATTGCTGCCATCTGTCCTGGGTGGGATaGACCGAGCTAGTCACGGGTGTCGGATCAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PASDCCHLSWVG*TELVTGVGSDL Trigger: AAGATCTGATCCGACACCCGTGACTAGCTCGGTGCATCCCACCCAGGACAGATGGCAGCAATCACTTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR GCA 72 bp | TTGACCATGTCTCCCACTCCACCTGCAAGTGATTGCTaGCATCTGTCCTGGGTGGGATGCACCGAGCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTMSPTPPASDC*HLSWVGCTELV Trigger: GACTAGCTCGGTGCATCCCACCCAGGACAGATGGCAGCAATCACTTGCAGGTGGAGTGGGAGACATGGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR GCA 72 bp | CAGTGCCACCAGGCCTGTCAGCAAAGCACCTTCCTCTaGCCACAGCCAGTCAGAGAAAACGATCCAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QCHQACQQSTFL*PQPVRENDPKE Trigger: CTCCTTTGGATCGTTTTCTCTGACTGGCTGTGGGCAGAGGAAGGTGCTTTGCTGACAGGCCTGGTGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR TCA 72 bp | GTGGGGGCAGGGAGGGTACAGCCAGGCTCACAGCACTaGGAGTCTCAACCAGCTAAGCTAAATTGCAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VGAGRVQPGSQH*ESQPAKLNCKL Trigger: TAGCTTGCAATTTAGCTTAGCTGGTTGAGACTCTCAGTGCTGTGAGCCTGGCTGTACCCTCCCTGCCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGAGGCTAACAAGACCACAGTAGCCCCCTTCCCAGGTACCACACTGTCCCTGACGAAATTCATCTTTTaGTATCACCACCCCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: DEANKTTVAPFPGTTLSLTKFIF*YHHPHP Trigger: AGGGTGGGGGTGGTGATACAAAAAGATGAATTTCGT...CAGGGACAGTGTGGTACCTGGGAAGGGGGCTACTGTGGTCTTGTTAGCCTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CCA 72 bp | GAGGCAAACCCACACCCAAAAGTACCTTGTTTTCCTTaGGGAAGATGCGTGGAGCTGTCCACAGATAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: EANPHPKVPCFP*GRCVELSTDSL Trigger: TAGGCTATCTGTGGACAGCTCCACGCATCTTCCCCAAGGAAAACAAGGTACTTTTGGGTGTGGGTTTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR-3UTR CAA 90 bp | CGTGCCATGCATGAAACAAAGGGTTCCAGGCTCCAGAGAGGAGATCACCTCGACTCAAGTACGCAAGCTTaGACTTCACTACTTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RAMHETKGSRLQRGDHLDSSTQA*TSLLAV Trigger: TACAGCAAGTAGTGAAGTCAAAGCTTGCGTACTTGA...GTCGAGGTGATCTCCTCTCTGGAGCCTGGAACCCTTTGTTTCATGCATGGCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCATCGAAGCCACTGCTCCTGGGAGCACACAAGCTTCTCCCTGGAACAGCTCATACAAACGTACGTTTaGAGAGAAAAGTCAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HHRSHCSWEHTSFSLEQLIQTYV*REKSKV Trigger: CACCTTTGACTTTTCTCTCAAAACGTACGTTTGTAT...GAGCTGTTCCAGGGAGAAGCTTGTGTGCTCCCAGGAGCAGTGGCTTCGATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR GCA 72 bp | AGTGTTTGTACTGCTGCTGGTCAGAATGTTGTTAACTaGTCAGTTCTAGGAAGCAGGAGAGCTCGCTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SVCTAAGQNVVN*SVLGSRRARLC Trigger: GCACAAGCGAGCTCTCCTGCTTCCTAGAACTGAGCAGTTAACAACATTCTGACCAGCAGCAGTACAAACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAAACCTTGCTTTTAGTGTTTGTACTGCTGCTGGTCAGAATGTTGTTAACGGCACACAGCAGGGTTaGCACAGCAGAGGCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KENLAFSVCTAAGQNVVNGTQQG*HSRGLW Trigger: CCAGAGGCCTCTGCTGTGCAAACCCTGCTGTGTGCC...GTTAACAACATTCTGACCAGCAGCAGTACAAACACTAAAAGCAAGGTTTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR GCA 72 bp | TACTCTTTCAAGTACGCAAGCTTTGACTTCACTACTTaGTGTAGCCTGTCCCCACTGTCTATCCAGTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: YSFKYASFDFTT*CSLSPLSIQCL Trigger: TAAGCACTGGATAGACAGTGGGGACAGGCTACAGCAAGTAGTGAAGTCAAAGCTTGCGTACTTGAAAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CCA 72 bp | CAGATAGCCTACCCACTGGATTGCTACCGCCGTGTGTaGTGTTTTCATACAAACGTACGTTTTGAGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QIAYPLDCYRRV*CFHTNVRFERK Trigger: TTTTCTCTCAAAACGTACGTTTGTATGAAAACACCACACACGGCGGTAGCAATCCAGTGGGTAGGCTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR TCA 72 bp | GGATCAGATCTTTTAAAAACACTTGTCTCATGTAATTaGGACCCGCCACCATCGCAGATGAGTGACAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GSDLLKTLVSCN*DPPPSQMSDKR Trigger: TCTCTTGTCACTCATCTGCGATGGTGGCGGGTCTCAATTACATGAGACAAGTGTTTTTAAAAGATCTGATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCCCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCTCGGAGCTTGTACATGTaGTTGAGGGCCTGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGPWTQTQAGGPTGASVARSLYM*LRAWVR Trigger: CCTCACCCAGGCCCTCAACCACATGTACAAGCTCCG...AGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGGGCCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR TCA 90 bp | CCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCTCTGGGGGATGTTGTCAGAAGCATaGTTCAGCAGGAGCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGPRPRQEGRRVPRSLWGMLSEA*FSRSFV Trigger: CACGAAGCTCCTGCTGAATCATGCTTCTGACAACAT...CCCCCAGAGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR TCA 90 bp | CTGACGTCCACCGTGCATGTGGCTGAGGGAGAGAGCCAGCTGGTTGTTTCTGGTGGCTGGGCACTGGGGTaGATGTCTCCTCCTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSTVHVAEGESQLVVSGGWALG*MSPPSA Trigger: AGCGGAAGGAGGAGACATTCACCCCAGTGCCCAGCC...ACCAGAAACAACCAGCTGGCTCTCTCCCTCAGCCACATGCACGGTGGACGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CCA 90 bp | AACAAGCCCCACCCTAACAGTGGGGGCAGGGAGGGTACAGCCAGGCTCACAGCACAGACACTCGAAGCTTaGCCATGCGTGTGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NKPHPNSGGREGTARLTAQTLEA*PCVCPT Trigger: TGTGGGACACACGCATGGCCAAGCTTCGAGTGTCTG...TGCTGTGAGCCTGGCTGTACCCTCCCTGCCCCCACTGTTAGGGTGGGGCTTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CAA 72 bp | ACACTTGAGCTGAGCTGGCCCGAACACTCGCTGTGCTaGGCGTGCAGTCCTTGGGTGGAAGAGAAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLELSWPEHSLC*ACSPWVEEKGW Trigger: CCAGCCTTTCTCTTCCACCCAAGGACTGCACGCCAAGCACAGCGAGTGTTCGGGCCAGCTCAGCTCAAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTTCCACACTCTTCCCCCAATCTCCGCCACACAGGGCACACAGCAGGGTTCAGGTTGTCCAGCTTaGCATGTGCCTCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVFHTLPPISATQGTQQGSGCPA*HVPLAA Trigger: GGCAGCAAGAGGCACATGCCAAGCTGGACAACCTGA...ACCCTGCTGTGTGCCCTGTGTGGCGGAGATTGGGGGAAGAGTGTGGAACACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR TCA 90 bp | CATCATCGAAGCCACTGCTCCTGGGAGCACACAAGCTTCTCCCTGGAACAGCTCTCAGCAGGAGCTTCGTaGTCTCCATGTAGTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHRSHCSWEHTSFSLEQLSAGAS*SPCSAG Trigger: GCCCGCACTACATGGAGATCACGAAGCTCCTGCTGA...GAGCTGTTCCAGGGAGAAGCTTGTGTGCTCCCAGGAGCAGTGGCTTCGATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR TCA 90 bp | CGTGCCATGCATGAAACAAAGGGTTCCAGGCTCCAGAGAGGAGATCACCTCGACAGGCCCCGCTGCTGCTaGTCTCCATCAAGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAMHETKGSRLQRGDHLDRPRCC*SPSRSG Trigger: ACCTGACCTTGATGGAGATCAGCAGCAGCGGGGCCT...GTCGAGGTGATCTCCTCTCTGGAGCCTGGAACCCTTTGTTTCATGCATGGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CAA 72 bp | GTTGTTTCTGGTATAGCTGTGCCACGAGAGCCCAGCTaGCTGTTGCTGCGGCCCTGGGGTTTAACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVSGIAVPREPS*LLLRPWGLTSS Trigger: GGAAGAGGTTAAACCCCAGGGCCGCAGCAACAGCAAGCTGGGCTCTCGTGGCACAGCTATACCAGAAACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CAA 72 bp | TTCCCAGTTTCAGCACTTCAGTCAGGGCTGACCAACTaGAAAAGAGCCTCCGACTGTCCTCCATCGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPVSALQSGLTN*KRASDCPPSDR Trigger: CCTGTCCGATGGAGGACAGTCGGAGGCTCTTTTCAAGTTGGTCAGCCCTGACTGAAGTGCTGAAACTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAGAAGTAAAGTGACAATCAGAACCAGGTACAAGCCAGTAAAGCGGCAGGTGCGGGCTGGGCACTaGGGTGAATGTCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLRSKVTIRTRYKPVKRQVRAGH*GECLLL Trigger: AAGGAGGAGACATTCACCCCAGTGCCCAGCCCGCAC...CTGCCGCTTTACTGGCTTGTACCTGGTTCTGATTGTCACTTTACTTCTGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR GCA 90 bp | ATGCTCAGAAGTAAAGTGACAATCAGAACCAGGTACAAGCCAGTAAAGCGGCAGGTCCAGCTTGGCATGTaGCTCTTGCTGCCGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: MLRSKVTIRTRYKPVKRQVQLGM*LLLPHK Trigger: TTTGTGCGGCAGCAAGAGGCACATGCCAAGCTGGAC...CTGCCGCTTTACTGGCTTGTACCTGGTTCTGATTGTCACTTTACTTCTGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAACCTTGCTTTTAGTGTTTGTACTGCTGCTGGTCAGAATGTTGTTAACGTGCTCTCGGAGGGCTaGAGGTTTGTGCGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KENLAFSVCTAAGQNVVNVLSEG*RFVRSL Trigger: CAAGCTCCGCACAAACCTCCAGCCCTCCGAGAGCAC...GTTAACAACATTCTGACCAGCAGCAGTACAAACACTAAAAGCAAGGTTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| 3UTR CAA 72 bp | ATAGCAGCAGTCTGTACTCTTTCAAGTACGCAAGCTTaGACTTCACTACTTGCTGTAGCCTGTCCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IAAVCTLSSTQA*TSLLAVACPHC Trigger: ACAGTGGGGACAGGCTACAGCAAGTAGTGAAGTCAAAGCTTGCGTACTTGAAAGAGTACAGACTGCTGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCCCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCTACGGGTAAGCCGGGGTaGAAGGGCCCCAGGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGPWTQTQAGGPTGASVATGKPG*KGPRSP Trigger: GGGGGACCTGGGGCCCTTCAACCCCGGCTTACCCGT...AGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGGGCCCCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGACCCAGACCCAGGCAGGAGGGCCGACGGGTGCCTCGGTCGCTCTGGGGGCGGATGGTGTCTGCTTaGGGGATGTTGTCAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPRPRQEGRRVPRSLWGRMVSA*GMLSEA Trigger: TGCTTCTGACAACATCCCCAAAGCAGACACCATCCG...CCCCCAGAGCGACCGAGGCACCCGTCGGCCCTCCTGCCTGGGTCTGGGTCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CAA 90 bp | CTGACGTCCACCGTGCATGTGGCTGAGGGAGAGAGCCAGCTGGTTGTTTCTGGTAGCTTGTACATGTGGTaGAGGGCCTGGGTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTSTVHVAEGESQLVVSGSLYMW*RAWVRK Trigger: CTTCCTCACCCAGGCCCTCAACCACATGTACAAGCT...ACCAGAAACAACCAGCTGGCTCTCTCCCTCAGCCACATGCACGGTGGACGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS CCA 90 bp | ATTCAGCAGGAGCTTCGTGATCTCCATGTAGTGCGGGCTGGGCACTaGGGTGAATGTCTCCTCCTTCCGCTCCTCATCACGCATCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQQELRDLHVVRAGH*GECLLLPLLITHLF Trigger: GAACAGATGCGTGATGAGGAGCGGAAGGAGGAGACATTCACCCCAGTGCCCAGCCCGCACTACATGGAGATCACGAAGCTCCTGCTGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CAA 90 bp | AGTCCCTTCCATTGTCCCACAGGAGTTCCTCTGGCTGAGTATGCCATCCAGAGCGTCAGGTTGTCCAGCTaGGCATGTGCCTCTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPFHCPTGVPLAEYAIQSVRLSS*ACASCC Trigger: GCAGCAAGAGGCACATGCCAAGCTGGACAACCTGAC...GCTCTGGATGGCATACTCAGCCAGAGGAACTCCTGTGGGACAATGGAAGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CAA 90 bp | GATGAGGCTAACAAGACCACAGTAGCCCCCTTCCCAGGTACCACACTGTCCCTGAGGTTTGTGCGGAGCTaGTACATGTGGTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DEANKTTVAPFPGTTLSLRFVRS*YMWLRA Trigger: GGCCCTCAACCACATGTACAAGCTCCGCACAAACCT...CAGGGACAGTGTGGTACCTGGGAAGGGGGCTACTGTGGTCTTGTTAGCCTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
||
| CDS-3UTR CAA 90 bp | CGTGCCATGCATGAAACAAAGGGTTCCAGGCTCCAGAGAGGAGATCACCTCGACTCCATCAAGGTCAGGTaGTCCAGCTTGGCATGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAMHETKGSRLQRGDHLDSIKVR*SSLACA Trigger: GGCACATGCCAAGCTGGACAACCTGACCTTGATGGA...GTCGAGGTGATCTCCTCTCTGGAGCCTGGAACCCTTTGTTTCATGCATGGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034278.6 |
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