Pregenerated sensors for GINM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040006Ensembl transcript IDs: ENSMUST00000039763.14, ENSMUST00000065124.2, ENSMUST00000124838.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTCACCAACTGTAAAGGTCTaGGGAATTTGGCAATTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QQRHLGGLGTWLCLASLSPTVKV*GIWQFL Trigger: AAGAAATTGCCAAATTCCCAAGACCTTTACAGTTGG...TGAAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGGTCTTGGGCATTCTGCGGGGCTGTaGACGGCGGCCTGGGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: ASLCTEPHTERANCKGLGHSAGL*TAAWAR Trigger: ACGCGCCCAGGCCGCCGTCCACAGCCCCGCAGAATG...CCCAAGACCTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR GCA 90 bp | TCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGATTTGGATGCCATTCTaGGGGGCTGTGGACGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SEQPACARSLTLKGPTVKIWMPF*GAVDGG Trigger: GCCGCCGTCCACAGCCCCGCAGAATGGCATCCAAAT...CTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CCA 90 bp | TGGTATTCAAATGGCAAGTCTGGGGGCAATAGAGTCCATGATTGGAGATGGTGCCATTCTGCGGGGCTGTaGACGGCGGCCTGGGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WYSNGKSGGNRVHDWRWCHSAGL*TAAWAR Trigger: ACGCGCCCAGGCCGCCGTCCACAGCCCCGCAGAATG...GCACCATCTCCAATCATGGACTCTATTGCCCCCAGACTTGCCATTTGAATACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR TCA 90 bp | GCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGGTCTTGGGTTTCCACATTCCCCATaGGGTAGTGGCTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTEPHTERANCKGLGFPHSP*GSGWWS Trigger: AGACCACCAGCCACTACCTCATGGGGAATGTGGAAA...CCCAAGACCTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR GCA 90 bp | CTTAGTGATTCATCTTCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAATTTGGATGCCATTCTaGGGGGCTGTGGACGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSDSSSEQPACARSLTLKIWMPF*GAVDGG Trigger: GCCGCCGTCCACAGCCCCGCAGAATGGCATCCAAAT...TTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGAAGATGAATCACTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR GCA 90 bp | TCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGCACTGCTATGACTCCTaGTGCTCCCAGAACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEQPACARSLTLKGPTVKHCYDS*CSQNSN Trigger: GTTGGAGTTCTGGGAGCAGCAGGAGTCATAGCAGTG...CTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CCA 90 bp | TCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGTGGATGACAATCAGCTaGGAGCTGGCACTGTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEQPACARSLTLKGPTVKWMTIS*ELALYV Trigger: GACGTACAGTGCCAGCTCCCAGCTGATTGTCATCCA...CTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR GCA 90 bp | TGCAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTCACTGCTATGACTCCTaGTGCTCCCAGAACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSKGTWEVLALGFVLLPFHCYDS*CSQNSN Trigger: GTTGGAGTTCTGGGAGCAGCAGGAGTCATAGCAGTG...AAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGGTCTTGGGGTAGTTACATTGATTTaGATGCCATTCTGCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTEPHTERANCKGLGVVTLI*MPFCGA Trigger: AGCCCCGCAGAATGGCATCCAAATCAATGTAACTAC...CCCAAGACCTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGGTCTTGGGAGCTTCTCCATCCACTaGCACATTACCTTGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTEPHTERANCKGLGSFSIH*HITLYE Trigger: TTCATACAAGGTAATGTGCCAGTGGATGGAGAAGCT...CCCAAGACCTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTGCACATTACCTTGTATaGAGATGGAGGCTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSKGTWEVLALGFVLLPFAHYLV*RWRLCS Trigger: AGAGCAGAGCCTCCATCTTCATACAAGGTAATGTGC...AAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR TCA 90 bp | CAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTCAGCACATTACCTTGTATaGAGATGGAGGCTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQRHLGGLGTWLCLASLSAHYLV*RWRLCS Trigger: AGAGCAGAGCCTCCATCTTCATACAAGGTAATGTGC...TGAAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR GCA 90 bp | CAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTCAGAGTCTCAGGCAACTTaGCAGGTAAAGCATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQRHLGGLGTWLCLASLSESQAT*QVKHFH Trigger: ATGGAAATGCTTTACCTGGCAAGTTGCCTGAGACTC...TGAAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CCA 90 bp | TGGTATTCAAATGGCAAGTCTGGGGGCAATAGAGTCCATGATTGGAGATGGTGCTGGATGACAATCAGCTaGGAGCTGGCACTGTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: WYSNGKSGGNRVHDWRWCWMTIS*ELALYV Trigger: GACGTACAGTGCCAGCTCCCAGCTGATTGTCATCCA...GCACCATCTCCAATCATGGACTCTATTGCCCCCAGACTTGCCATTTGAATACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CCA 90 bp | TCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGAGCTTCTCCATCCACTaGCACATTACCTTGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEQPACARSLTLKGPTVKSFSIH*HITLYE Trigger: TTCATACAAGGTAATGTGCCAGTGGATGGAGAAGCT...CTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR GCA 90 bp | CTTAGTGATTCATCTTCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGAGTCTCAGGCAACTTaGCAGGTAAAGCATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSDSSSEQPACARSLTLKESQAT*QVKHFH Trigger: ATGGAAATGCTTTACCTGGCAAGTTGCCTGAGACTC...TTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGAAGATGAATCACTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTCTAAGATCCTCACAGTaGCAATTCCAAAATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSKGTWEVLALGFVLLPFLRSSQ*QFQNSV Trigger: AACACTATTTTGGAATTGTCACTGTGAGGATCTTAG...AAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR TCA 90 bp | CAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTCAAAAAGTCAGGAAGCGTaGATAAAATGTCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQRHLGGLGTWLCLASLSKSQEA*IKCHCL Trigger: AAGACAGTGACATTTTATTCACGCTTCCTGACTTTT...TGAAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAAGGCACCTGGGAGGTCTTGGCACTTGGCTTTGTCTTGCTTCCCTTTAAAAGTCAGGAAGCGTaGATAAAATGTCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSKGTWEVLALGFVLLPFKSQEA*IKCHCL Trigger: AAGACAGTGACATTTTATTCACGCTTCCTGACTTTT...AAAGGGAAGCAAGACAAAGCCAAGTGCCAAGACCTCCCAGGTGCCTTTGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGGCCAACTGTAAAGGTCTTGGGAATTTGGCAATTTCTTTGTTTAAGTTGTGCTATGACTCCTGCTaGTCCCAGAACTCCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERANCKGLGNLAISLFKLCYDSC*SQNSNH Trigger: GTGGTTGGAGTTCTGGGAGCAGCAGGAGTCATAGCA...CAACTTAAACAAAGAAATTGCCAAATTCCCAAGACCTTTACAGTTGGCCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR TCA 90 bp | TGGTATTCAAATGGCAAGTCTGGGGGCAATAGAGTCCATGATTGGAGATGGTGCCTAAGATCCTCACAGTaGCAATTCCAAAATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WYSNGKSGGNRVHDWRWCLRSSQ*QFQNSV Trigger: AACACTATTTTGGAATTGTCACTGTGAGGATCTTAG...GCACCATCTCCAATCATGGACTCTATTGCCCCCAGACTTGCCATTTGAATACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| 3UTR CAA 72 bp | CACACTGAAAGGGCCAACTGTAAAGGTCTTGGGAATTaGGCAATTTCTTTGTTTAAGTTGAATGATTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTERANCKGLGN*AISLFKLNDLN Trigger: ATTTAAATCATTCAACTTAAACAAAGAAATTGCCAAATTCCCAAGACCTTTACAGTTGGCCCTTTCAGTGTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS GCA 90 bp | TATGGAAACCCCAGGGCAACCTCTTCCAAAGGCAAGGGGAGGATGTaGCGCCGGCTTGGAGGTTTCTCAGCTCTCGGATGCCTCCGCTAT | + |
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Preference number: 5 (lower is better) Translates to: YGNPRATSSKGKGRM*RRLGGFSALGCLRY Trigger: ATAGCGGAGGCATCCGAGAGCTGAGAAACCTCCAAGCCGGCGGCACATCCTCCCCTTGCCTTTGGAAGAGGTTGCCCTGGGGTTTCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065124.2 |
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| CDS CCA 90 bp | TCTTCAGACTCTTCCCCACTCTTGCTCAGGGTAGTTACATTGATTTaGATGCCATTCTGCGGGGCTGTGGACGGCGGCCTGGGCGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSDSSPLLLRVVTLI*MPFCGAVDGGLGAL Trigger: CAACGCGCCCAGGCCGCCGTCCACAGCCCCGCAGAATGGCATCCAAATCAATGTAACTACCCTGAGCAAGAGTGGGGAAGAGTCTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGGTCTTGGGGACTCTTCCCCACTCTaGCTCAGGGTAGTTACATTG | + |
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Preference number: 5 (lower is better) Translates to: ASLCTEPHTERANCKGLGDSSPL*LRVVTL Trigger: CAATGTAACTACCCTGAGCAAGAGTGGGGAAGAGTC...CCCAAGACCTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGGTCTTGGGCTAACAGTTCCTTTTTaGGAAAAGTCAGGAAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: ASLCTEPHTERANCKGLGLTVPF*EKSGSV Trigger: CACGCTTCCTGACTTTTCCAAAAAAGGAACTGTTAG...CCCAAGACCTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039763.14 |
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| CDS-3UTR CAA 90 bp | TCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGCACTGGCACATTACCTaGTATGAAGATGGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEQPACARSLTLKGPTVKHWHIT*YEDGGS Trigger: AGAGCCTCCATCTTCATACAAGGTAATGTGCCAGTG...CTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | TCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGTTCAGTAACATTCTTTaGTTGAGCTTGTCTCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SEQPACARSLTLKGPTVKFSNIL*LSLSPV Trigger: GACGGGAGACAAGCTCAACAAAAGAATGTTACTGAA...CTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | TGGTATTCAAATGGCAAGTCTGGGGGCAATAGAGTCCATGATTGGAGATGGTGCGACTCTTCCCCACTCTaGCTCAGGGTAGTTACATTG | + |
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Preference number: 5 (lower is better) Translates to: WYSNGKSGGNRVHDWRWCDSSPL*LRVVTL Trigger: CAATGTAACTACCCTGAGCAAGAGTGGGGAAGAGTC...GCACCATCTCCAATCATGGACTCTATTGCCCCCAGACTTGCCATTTGAATACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | CTTAGTGATTCATCTTCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAATTCTTTTGTTGAGCTaGTCTCCCGTCAATCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSDSSSEQPACARSLTLKILLLS*SPVNLH Trigger: GTGGAGATTGACGGGAGACAAGCTCAACAAAAGAAT...TTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGAAGATGAATCACTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | TCTGAACAGCCAGCCTGTGCACGGAGCCTCACACTGAAAGGGCCAACTGTAAAGTTTATCTGTAAGTTTTaGTGCTGTTTTCTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SEQPACARSLTLKGPTVKFICKF*CCFLRA Trigger: GGCTCTGAGAAAACAGCACAAAAACTTACAGATAAA...CTTTACAGTTGGCCCTTTCAGTGTGAGGCTCCGTGCACAGGCTGGCTGTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | TGGTATTCAAATGGCAAGTCTGGGGGCAATAGAGTCCATGATTGGAGATGGTGCATTCTTTTGTTGAGCTaGTCTCCCGTCAATCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WYSNGKSGGNRVHDWRWCILLLS*SPVNLH Trigger: GTGGAGATTGACGGGAGACAAGCTCAACAAAAGAAT...GCACCATCTCCAATCATGGACTCTATTGCCCCCAGACTTGCCATTTGAATACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | TGGTATTCAAATGGCAAGTCTGGGGGCAATAGAGTCCATGATTGGAGATGGTGCACAGTTCCTACTTTTTaGGAAAAGTCAGGAAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WYSNGKSGGNRVHDWRWCTVPTF*EKSGSV Trigger: CACGCTTCCTGACTTTTCCAAAAAAGTAGGAACTGT...GCACCATCTCCAATCATGGACTCTATTGCCCCCAGACTTGCCATTTGAATACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000124838.2 |
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| CDS TCA 90 bp | GGGTATAAGATGATAGGTACCGAGATCCCATTCATTTTATCCACCTaGAGAATTCCTTTGTTCTCACACACTGGGAAGAGCAGCTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: GYKMIGTEIPFILST*RIPLFSHTGKSSFN Trigger: GTTAAAGCTGCTCTTCCCAGTGTGTGAGAACAAAGGAATTCTTCAGGTGGATAAAATGAATGGGATCTCGGTACCTATCATCTTATACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGGCCAACTGTAAAGGTCTTGGGAATTTGGCAATTTCTTTGTTTAAGTTGCACTGGCACATTACCTaGTATGAAGATGGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERANCKGLGNLAISLFKLHWHIT*YEDGGS Trigger: AGAGCCTCCATCTTCATACAAGGTAATGTGCCAGTG...CAACTTAAACAAAGAAATTGCCAAATTCCCAAGACCTTTACAGTTGGCCCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGGCCAACTGTAAAGGTCTTGGGAATTTGGCAATTTCTTTGTTTAAGTTGAGTAACATTCTTTTGTaGAGCTTGTCTCCCGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: ERANCKGLGNLAISLFKLSNILL*SLSPVN Trigger: ATTGACGGGAGACAAGCTCAACAAAAGAATGTTACT...CAACTTAAACAAAGAAATTGCCAAATTCCCAAGACCTTTACAGTTGGCCCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGGCCAACTGTAAAGGTCTTGGGAATTTGGCAATTTCTTTGTTTAAGTTGTTTATCTGTAAGTTTTaGTGCTGTTTTCTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERANCKGLGNLAISLFKLFICKF*CCFLRA Trigger: GGCTCTGAGAAAACAGCACAAAAACTTACAGATAAA...CAACTTAAACAAAGAAATTGCCAAATTCCCAAGACCTTTACAGTTGGCCCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS TCA 90 bp | TTCTCCTCCAATTTTTCCAGATTTTCACTCTTCACTATCAAAGTCTaGCAGCTTATTCGGGTTACACCACTATTTACAGGTAAGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FSSNFSRFSLFTIKV*QLIRVTPLFTGKSF Trigger: AAATGACTTACCTGTAAATAGTGGTGTAACCCGAATAAGCTGTCAGACTTTGATAGTGAAGAGTGAAAATCTGGAAAAATTGGAGGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS CAA 72 bp | CCATTCTGCGGGGCTGTGGACGGCGGCCTGGGCGCGTaGGTGGTCAGCCATCCCGCGGCTGGCAGCGCTATG | + |
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Preference number: 6 (lower is better) Translates to: PFCGAVDGGLGA*VVSHPAAGSAM Trigger: CATAGCGCTGCCAGCCGCGGGATGGCTGACCACCAACGCGCCCAGGCCGCCGTCCACAGCCCCGCAGAATGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS CAA 90 bp | ATTTGGATGCCATTCTGCGGGGCTGTGGACGGCGGCCTGGGCGCGTaGGTGGTCAGCCATCCCGCGGCTGGCAGCGCTATGAACAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: IWMPFCGAVDGGLGA*VVSHPAAGSAMNSN Trigger: GTTGCTGTTCATAGCGCTGCCAGCCGCGGGATGGCTGACCACCAACGCGCCCAGGCCGCCGTCCACAGCCCCGCAGAATGGCATCCAAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS GCA 72 bp | CCCAGGGCAACCTCTTCCAAAGGCAAGGGGAGGATGTaGCGCCGGCTTGGAGGTTTCTCAGCTCTCGGATGC | + |
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Preference number: 6 (lower is better) Translates to: PRATSSKGKGRM*RRLGGFSALGC Trigger: GCATCCGAGAGCTGAGAAACCTCCAAGCCGGCGGCACATCCTCCCCTTGCCTTTGGAAGAGGTTGCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065124.2 |
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| CDS GCA 72 bp | TTGCTCAGGGTAGTTACATTGATTTGGATGCCATTCTaGGGGGCTGTGGACGGCGGCCTGGGCGCGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLRVVTLIWMPF*GAVDGGLGALV Trigger: CACCAACGCGCCCAGGCCGCCGTCCACAGCCCCGCAGAATGGCATCCAAATCAATGTAACTACCCTGAGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS CAA 90 bp | TTCTTCAGACTCTTCCCCACTCTTGCTCAGGGTAGTTACATTGATTaGGATGCCATTCTGCGGGGCTGTGGACGGCGGCCTGGGCGCGTT | + |
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Preference number: 6 (lower is better) Translates to: FFRLFPTLAQGSYID*DAILRGCGRRPGRV Trigger: AACGCGCCCAGGCCGCCGTCCACAGCCCCGCAGAATGGCATCCAAATCAATGTAACTACCCTGAGCAAGAGTGGGGAAGAGTCTGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS CCA 72 bp | TCTTCCCCACTCTTGCTCAGGGTAGTTACATTGATTTaGATGCCATTCTGCGGGGCTGTGGACGGCGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSPLLLRVVTLI*MPFCGAVDGGL Trigger: CAGGCCGCCGTCCACAGCCCCGCAGAATGGCATCCAAATCAATGTAACTACCCTGAGCAAGAGTGGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS CCA 72 bp | GATGCCTCGGGCTTGGCGATTTTGATGGAGAGACTATaGAAACCCCAGGGCAACCTCTTCCAAAGGCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: DASGLAILMERL*KPQGNLFQRQG Trigger: CCCTTGCCTTTGGAAGAGGTTGCCCTGGGGTTTCCATAGTCTCTCCATCAAAATCGCCAAGCCCGAGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065124.2 |
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| CDS CCA 72 bp | TCAATCTCCACAACCTCTCCTTGGATGACAATCAGCTaGGAGCTGGCACTGTACGTCACAGGCCTCTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: SISTTSPWMTIS*ELALYVTGLSR Trigger: TCTCGAGAGGCCTGTGACGTACAGTGCCAGCTCCCAGCTGATTGTCATCCAAGGAGAGGTTGTGGAGATTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS CAA 72 bp | CTCGGATGCCTCCGCTATTCCTACGGAATGGCCCTCTaGAGATACAGGTCTTTATATGGGTCACCAAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LGCLRYSYGMAL*RYRSLYGSPRA Trigger: CGCCCTTGGTGACCCATATAAAGACCTGTATCTCAAGAGGGCCATTCCGTAGGAATAGCGGAGGCATCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065124.2 |
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| CDS CAA 90 bp | TTGTATGAAGATGGAGGCTCTGCTCTAAGAGGAGTCTCAGGCAACTaGCCAGGTAAAGCATTTCCATCCACAGTGGTTTCCACATTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LYEDGGSALRGVSGN*PGKAFPSTVVSTFP Trigger: GGGGAATGTGGAAACCACTGTGGATGGAAATGCTTTACCTGGCAAGTTGCCTGAGACTCCTCTTAGAGCAGAGCCTCCATCTTCATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS CCA 72 bp | AACCTACAGAGCGCTTTTCTCAGCTTCTCCATCCACTaGCACATTACCTTGTATGAAGATGGAGGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NLQSAFLSFSIH*HITLYEDGGSA Trigger: AGCAGAGCCTCCATCTTCATACAAGGTAATGTGCCAGTGGATGGAGAAGCTGAGAAAAGCGCTCTGTAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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| CDS TCA 72 bp | ATGATAGGTACCGAGATCCCATTCATTTTATCCACCTaGAGAATTCCTTTGTTCTCACACACTGGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: MIGTEIPFILST*RIPLFSHTGKS Trigger: GCTCTTCCCAGTGTGTGAGAACAAAGGAATTCTTCAGGTGGATAAAATGAATGGGATCTCGGTACCTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039763.14 ENSMUST00000124838.2 |
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