Pregenerated sensors for GIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026333Ensembl transcript IDs: ENSMUST00000027571.13, ENSMUST00000112842.8, ENSMUST00000112844.10, ENSMUST00000138142.8, ENSMUST00000189031.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATaGTGGCCTAAAACTCAGAGATCCACCTGCCTCTGCCTTCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: LCGPGCPGRNLFWRP*WPKTQRSTCLCLPS Trigger: GCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 90 bp | AGGGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTaGAGACCATGCTGGCCTAAAACTCAGAGATCCACCTGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: RASLCGPGCPGRNLF*RPCWPKTQRSTCLC Trigger: GCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 90 bp | TGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATGCTaGCCTAAAACTCAGAGATCCACCTGCCTCTGCCTTCCAAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: CGPGCPGRNLFWRPC*PKTQRSTCLCLPSN Trigger: ATTGCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 90 bp | AAGGCAAAGGAAAGGGCTGGCAGATGCTCATCCCAGCTGTTGGGGTaGTCGGCACAGTGTTTGGAGAGGAATGTTTTGATGGTGCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: KAKERAGRCSSQLLG*SAQCLERNVLMVLG Trigger: ACCTAGCACCATCAAAACATTCCTCTCCAAACACTGTGCCGACCACCCCAACAGCTGGGATGAGCATCTGCCAGCCCTTTCCTTTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138142.8 ENSMUST00000189031.2 |
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| 3UTR GCA 90 bp | TTCTGGAGACCATGCTGGCCTAAAACTCAGAGATCCACCTGCCTCTaGCTTCCAAGCAATGGGATTAAAGATGTGCACCACCACAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: FWRPCWPKTQRSTCL*LPSNGIKDVHHHSL Trigger: CAGGCTGTGGTGGTGCACATCTTTAATCCCATTGCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR GCA 90 bp | GACTTCATTCTTTCCCTGACAGTCACTTGTCCTTCAGCTGGAGTGTaGTCTGCTGGTGCAGTGGATCCTAGTGTGGTTCCCAGTACTCAA | + |
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Preference number: 1 (lower is better) Translates to: DFILSLTVTCPSAGV*SAGAVDPSVVPSTQ Trigger: TTGAGTACTGGGAACCACACTAGGATCCACTGCACCAGCAGAGCACACTCCAGCTGAAGGACAAGTGACTGTCAGGGAAAGAATGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR CCA 90 bp | GCTGGTGCAGTGGATCCTAGTGTGGTTCCCAGTACTCAACCTGGTTaGTGCCCAATCACCTGTAACTTCAGCTTCAGCATATCCAATACC | + |
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Preference number: 1 (lower is better) Translates to: AGAVDPSVVPSTQPG*CPITCNFSFSISNT Trigger: GGTATTGGATATGCTGAAGCTGAAGTTACAGGTGATTGGGCACCAACCAGGTTGAGTACTGGGAACCACACTAGGATCCACTGCACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR GCA 90 bp | AACTTGTTCTGGAGACCATGCTGGCCTAAAACTCAGAGATCCACCTaGCTCTGCCTTCCAAGCAATGGGATTAAAGATGTGCACCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NLFWRPCWPKTQRST*LCLPSNGIKDVHHH Trigger: GTGGTGGTGCACATCTTTAATCCCATTGCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 90 bp | TTTACTCAGTTCATCCGAATTGTTGTTCTCCATCTGGCTCGATGCTaGTGTCTTGTTCTCCACCACGCCATCAGCCTCTCTAATCGCAGC | + |
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Preference number: 1 (lower is better) Translates to: FTQFIRIVVLHLARC*CLVLHHAISLSNRS Trigger: GCTGCGATTAGAGAGGCTGATGGCGTGGTGGAGAACAAGACACCAGCATCGAGCCAGATGGAGAACAACAATTCGGATGAACTGAGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR TCA 90 bp | AATGTCTTTGGTTTGTGTACAAGGTCAGAGACTTCATTCTTTCCCTaGCAGTCACTTGTCCTTCAGCTGGAGTGTGCTCTGCTGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: NVFGLCTRSETSFFP*QSLVLQLECALLVQ Trigger: CTGCACCAGCAGAGCACACTCCAGCTGAAGGACAAGTGACTGTCAGGGAAAGAATGAAGTCTCTGACCTTGTACACAAACCAAAGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR TCA 90 bp | CGATTGAACATTTGGAAATACGGTGTGTTTTTATTAGGCTCCAAGTaGGTGACATTGAAGGCAAAGGAAAGGGCTGGCAGATGCTCATCC | + |
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Preference number: 1 (lower is better) Translates to: RLNIWKYGVFLLGSK*VTLKAKERAGRCSS Trigger: GGATGAGCATCTGCCAGCCCTTTCCTTTGCCTTCAATGTCACTCACTTGGAGCCTAATAAAAACACACCGTATTTCCAAATGTTCAATCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR CCA 90 bp | CCACTCTGTTTTAGTTTCTTTCTAGAATTCTATCTGCAATGTCTTTaGTTTGTGTACAAGGTCAGAGACTTCATTCTTTCCCTGACAGTC | + |
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Preference number: 1 (lower is better) Translates to: PLCFSFFLEFYLQCL*FVYKVRDFILSLTV Trigger: GACTGTCAGGGAAAGAATGAAGTCTCTGACCTTGTACACAAACCAAAGACATTGCAGATAGAATTCTAGAAAGAAACTAAAACAGAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR CCA 90 bp | TCTGTTTCTCAAGAGAACTGTGGTCTTCTACCAATGCAGAGATTTTaGAATTTCTATATTCTAAGAGTTCATGATCCTTGCTTGATATCA | + |
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Preference number: 1 (lower is better) Translates to: SVSQENCGLLPMQRF*NFYILRVHDPCLIS Trigger: TGATATCAAGCAAGGATCATGAACTCTTAGAATATAGAAATTCCAAAATCTCTGCATTGGTAGAAGACCACAGTTCTCTTGAGAAACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR CCA 90 bp | TTTGAAGAATCCAGTAGGCTAAAAGTCTGTTTCTCAAGAGAACTGTaGTCTTCTACCAATGCAGAGATTTTGGAATTTCTATATTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: FEESSRLKVCFSREL*SSTNAEILEFLYSK Trigger: CTTAGAATATAGAAATTCCAAAATCTCTGCATTGGTAGAAGACCACAGTTCTCTTGAGAAACAGACTTTTAGCCTACTGGATTCTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR CAA 90 bp | CAAGACAGGGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTaGTTCTGGAGACCATGCTGGCCTAAAACTCAGAGATCCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: QDRASLCGPGCPGRN*FWRPCWPKTQRSTC Trigger: GCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCCCTGTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATGCTGGCATGGGATTAAAGATGTaGACCACCACAGCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LCVVLAAPAGTCSGDHAGMGLKM*TTTAWL Trigger: CAGCCAGGCTGTGGTGGTGCACATCTTTAATCCCAT...GCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCCCTCTTAAGCAACACTaGGCTCTGTATTTATCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QGFSVWSWLPRQELVLETPLKQH*ALYLSE Trigger: TTCTGATAAATACAGAGCTCAGTGTTGCTTAAGAGG...GGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CAA 90 bp | ACATTGAAGGCAAAGGAAAGGGCTGGCAGATGCTCATCCCAGCTGTaGGGGTGGTCGGCACAGTGTTTGGAGAGGAATGTTTTGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: TLKAKERAGRCSSQL*GWSAQCLERNVLMV Trigger: CACCATCAAAACATTCCTCTCCAAACACTGTGCCGACCACCCCAACAGCTGGGATGAGCATCTGCCAGCCCTTTCCTTTGCCTTCAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138142.8 ENSMUST00000189031.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCAAGACAGGGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTCCACCACAGCCTGGCTaGTTTGACAGTTTTCTATCT | + |
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Preference number: 2 (lower is better) Translates to: FFKTGLLCVVLAAPAGTCPPQPG*FDSFLS Trigger: AGATAGAAAACTGTCAAATCAGCCAGGCTGTGGTGG...ACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCCCTGTCTTGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CAA 90 bp | AGTTCATCCGAATTGTTGTTCTCCATCTGGCTCGATGCTGGTGTCTaGTTCTCCACCACGCCATCAGCCTCTCTAATCGCAGCTACGATT | + |
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Preference number: 2 (lower is better) Translates to: SSSELLFSIWLDAGV*FSTTPSASLIAATI Trigger: AATCGTAGCTGCGATTAGAGAGGCTGATGGCGTGGTGGAGAACAAGACACCAGCATCGAGCCAGATGGAGAACAACAATTCGGATGAACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR CAA 90 bp | TCCCAGCTGTTGGGGTGGTCGGCACAGTGTTTGGAGAGGAATGTTTaGATGGTGCTAGGTGTGTTTTCAGCTGGATTAACACTTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SQLLGWSAQCLERNV*MVLGVFSAGLTLPE Trigger: TTCTGGAAGTGTTAATCCAGCTGAAAACACACCTAGCACCATCAAAACATTCCTCTCCAAACACTGTGCCGACCACCCCAACAGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138142.8 ENSMUST00000189031.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGACCATGCTGGCCTAAAACTCAGAGATCCACCTGCCTCTGCCTTCCAAGCAACAGCCTGGCTGATTTaGCAGTTTTCTATCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: GDHAGLKLRDPPASAFQATAWLI*QFSILR Trigger: TCTTAAGATAGAAAACTGTCAAATCAGCCAGGCTGT...TGCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR-3UTR TCA 90 bp | GACATTGAAGGCAAAGGAAAGGGCTGGCAGATGCTCATCCCAGCTGTTGGGGTGATTATAGCATACACATaGCTTCTGTTGCTTGTATGG | + |
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Preference number: 2 (lower is better) Translates to: DIEGKGKGWQMLIPAVGVIIAYT*LLLLVW Trigger: CCATACAAGCAACAGAAGTCATGTGTATGCTATAAT...CACCCCAACAGCTGGGATGAGCATCTGCCAGCCCTTTCCTTTGCCTTCAATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTGACATTGAAGGCAAAGGAAAGGGCTGGCAGATGCTCATCCCAGCTGTTAGGTGTGTTTTCAGCTaGATTAACACTTCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VSDIEGKGKGWQMLIPAVRCVFS*INTSRS Trigger: GCTTCTGGAAGTGTTAATCCAGCTGAAAACACACCT...AACAGCTGGGATGAGCATCTGCCAGCCCTTTCCTTTGCCTTCAATGTCACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138142.8 ENSMUST00000189031.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTGGTATGTTCCAACTGGGATCTCAGGTAATCCAATGTAGTCGTGATCTGTTATTAGGCTCCAAGTaGGTGACATTGAAGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LPGMFQLGSQVIQCSRDLLLGSK*VTLKAK Trigger: CTTTGCCTTCAATGTCACTCACTTGGAGCCTAATAA...CAGATCACGACTACATTGGATTACCTGAGATCCCAGTTGGAACATACCAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATCGACCATGTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTATATCTGCAATGTCTTTaGTTTGTGTACAAGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FIDHVGTAVGSLPELCSVYLQCL*FVYKVR Trigger: TCTGACCTTGTACACAAACCAAAGACATTGCAGATA...TACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTACATGGTCGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR-3UTR GCA 90 bp | GAATTCTATCTGCAATGTCTTTGGTTTGTGTACAAGGTCAGAGACTTCATTCTTAAACACACGTATACATaGACATGCGCGCGCGCACAC | + |
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Preference number: 2 (lower is better) Translates to: EFYLQCLWFVYKVRDFILKHTYT*TCARAH Trigger: GTGTGCGCGCGCGCATGTGCATGTATACGTGTGTTT...AAGAATGAAGTCTCTGACCTTGTACACAAACCAAAGACATTGCAGATAGAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR-3UTR TCA 90 bp | TCTGTTTCTCAAGAGAACTGTGGTCTTCTACCAATGCAGAGATTTTGGAATTTCCGCAAGGATTCCGATTaGACATTTGGAAATACGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVSQENCGLLPMQRFWNFRKDSD*TFGNTV Trigger: CACCGTATTTCCAAATGTTCAATCGGAATCCTTGCG...GAAATTCCAAAATCTCTGCATTGGTAGAAGACCACAGTTCTCTTGAGAAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGAGGAATGTTTTGATGGTGCTAGGTGTGTTTTCAGCTGGATTAACACTTACACATGACTTCTGTTaGTTGTATGGAAAGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LERNVLMVLGVFSAGLTLTHDFC*LYGKVP Trigger: TGGGACCTTTCCATACAAGCAACAGAAGTCATGTGT...AAGTGTTAATCCAGCTGAAAACACACCTAGCACCATCAAAACATTCCTCTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTTCTCAAGAGAACTGTGGTCTTCTACCAATGCAGAGATTTTGGAATTTCAGCTATCCCAATAGTTaGATCTTCTACCAGAATATT | + |
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Preference number: 2 (lower is better) Translates to: SVSQENCGLLPMQRFWNFSYPNS*IFYQNI Trigger: AATATTCTGGTAGAAGATGCAACTATTGGGATAGCT...GAAATTCCAAAATCTCTGCATTGGTAGAAGACCACAGTTCTCTTGAGAAACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR GCA 72 bp | CCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATaGTGGCCTAAAACTCAGAGATCCACCTGCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: PGCPGRNLFWRP*WPKTQRSTCLC Trigger: GCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 72 bp | GGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATGCTaGCCTAAAACTCAGAGATCCACCTGCCTCTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: GCPGRNLFWRPC*PKTQRSTCLCL Trigger: AAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 72 bp | CTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTaGAGACCATGCTGGCCTAAAACTCAGAGATCCACC | + |
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Preference number: 3 (lower is better) Translates to: LCGPGCPGRNLF*RPCWPKTQRST Trigger: GGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 72 bp | CTGGAGTGTGCTCTGCTGGTGCAGTGGATCCTAGTGTaGTTCCCAGTACTCAACCTGGTTGGTGCCCAATCA | + |
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Preference number: 3 (lower is better) Translates to: LECALLVQWILV*FPVLNLVGAQS Trigger: TGATTGGGCACCAACCAGGTTGAGTACTGGGAACCACACTAGGATCCACTGCACCAGCAGAGCACACTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR-3UTR CAA 90 bp | GTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGTTCCCTGACAGTCACTaGTCCTTCAGCTGGAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VGTAVGSLPELCSVEESRFPDSH*SFSWSV Trigger: CACACTCCAGCTGAAGGACAAGTGACTGTCAGGGAA...CCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR CCA 72 bp | GAAAGGGCTGGCAGATGCTCATCCCAGCTGTTGGGGTaGTCGGCACAGTGTTTGGAGAGGAATGTTTTGATG | + |
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Preference number: 3 (lower is better) Translates to: ERAGRCSSQLLG*SAQCLERNVLM Trigger: CATCAAAACATTCCTCTCCAAACACTGTGCCGACCACCCCAACAGCTGGGATGAGCATCTGCCAGCCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138142.8 ENSMUST00000189031.2 |
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| 3UTR GCA 72 bp | CATGTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTaGTCTGTAGAGGAGAGTAGGCAAAGCCTACTAGCA | + |
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Preference number: 3 (lower is better) Translates to: HVGTAVGSLPEL*SVEESRQSLLA Trigger: TGCTAGTAGGCTTTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR-3UTR CAA 90 bp | GACATTGAAGGCAAAGGAAAGGGCTGGCAGATGCTCATCCCAGCTGTTGGGGTGCATGACTTCTGTTGCTaGTATGGAAAGGTCCCATCA | + |
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Preference number: 3 (lower is better) Translates to: DIEGKGKGWQMLIPAVGVHDFCC*YGKVPS Trigger: TGATGGGACCTTTCCATACAAGCAACAGAAGTCATG...CACCCCAACAGCTGGGATGAGCATCTGCCAGCCCTTTCCTTTGCCTTCAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR GCA 72 bp | CCATGCTGGCCTAAAACTCAGAGATCCACCTGCCTCTaGCTTCCAAGCAATGGGATTAAAGATGTGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: PCWPKTQRSTCL*LPSNGIKDVHH Trigger: GTGGTGCACATCTTTAATCCCATTGCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR CCA 72 bp | TTCATCCGAATTGTTGTTCTCCATCTGGCTCGATGCTaGTGTCTTGTTCTCCACCACGCCATCAGCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: FIRIVVLHLARC*CLVLHHAISLS Trigger: AGAGAGGCTGATGGCGTGGTGGAGAACAAGACACCAGCATCGAGCCAGATGGAGAACAACAATTCGGATGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR GCA 72 bp | TGGAGACCATGCTGGCCTAAAACTCAGAGATCCACCTaGCTCTGCCTTCCAAGCAATGGGATTAAAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: WRPCWPKTQRST*LCLPSNGIKDV Trigger: CACATCTTTAATCCCATTGCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGGCCAGCATGGTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR TCA 72 bp | GGTTTGTGTACAAGGTCAGAGACTTCATTCTTTCCCTaGCAGTCACTTGTCCTTCAGCTGGAGTGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: GLCTRSETSFFP*QSLVLQLECAL Trigger: CAGAGCACACTCCAGCTGAAGGACAAGTGACTGTCAGGGAAAGAATGAAGTCTCTGACCTTGTACACAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
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| 3UTR TCA 72 bp | ATTTGGAAATACGGTGTGTTTTTATTAGGCTCCAAGTaGGTGACATTGAAGGCAAAGGAAAGGGCTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: IWKYGVFLLGSK*VTLKAKERAGR Trigger: TCTGCCAGCCCTTTCCTTTGCCTTCAATGTCACTCACTTGGAGCCTAATAAAAACACACCGTATTTCCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR TCA 72 bp | GGATTAAAGATGTGCACCACCACAGCCTGGCTGATTTaGCAGTTTTCTATCTTAAGACAGAATAGGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: GLKMCTTTAWLI*QFSILRQNRDK Trigger: TTTGTCCCTATTCTGTCTTAAGATAGAAAACTGTCAAATCAGCCAGGCTGTGGTGGTGCACATCTTTAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTTTCTCAAGAGAACTGTGGTCTTCTACCAATGCAGAGATTTTGGAATTTCCTTCTACCAGAATATTaGCCTGGTATGTTCCAACTG | + |
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Preference number: 3 (lower is better) Translates to: SVSQENCGLLPMQRFWNFLLPEY*PGMFQL Trigger: CAGTTGGAACATACCAGGCAAATATTCTGGTAGAAG...GAAATTCCAAAATCTCTGCATTGGTAGAAGACCACAGTTCTCTTGAGAAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR CCA 72 bp | TCCAGTAGGCTAAAAGTCTGTTTCTCAAGAGAACTGTaGTCTTCTACCAATGCAGAGATTTTGGAATTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SSRLKVCFSREL*SSTNAEILEFL Trigger: TAGAAATTCCAAAATCTCTGCATTGGTAGAAGACCACAGTTCTCTTGAGAAACAGACTTTTAGCCTACTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR TCA 72 bp | TTTGTGAACAAATCTGTCATGATTATAGCATACACATaGCTTCTGTTGCTTGTATGGAAAGGTCCCATCAGA | + |
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Preference number: 3 (lower is better) Translates to: FVNKSVMIIAYT*LLLLVWKGPIR Trigger: TCTGATGGGACCTTTCCATACAAGCAACAGAAGTCATGTGTATGCTATAATCATGACAGATTTGTTCACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
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| 3UTR TCA 72 bp | CAGTTTTCTATCTTAAGACAGAATAGGGACAAAAGCTaGGAGTTCACACTGGAACAGATTTATTATAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QFSILRQNRDKS*EFTLEQIYYKE Trigger: CTCTTTATAATAAATCTGTTCCAGTGTGAACTCTCAGCTTTTGTCCCTATTCTGTCTTAAGATAGAAAACTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATGCAGACTCCACTAGAGTaGGGGTTCTGGAAATGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSVWSWLPRQELVLETMQTPLE*GFWKCR Trigger: ACGGCATTTCCAGAACCCTCACTCTAGTGGAGTCTG...CATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATGGGAAGCCATACCCACTaGTTGACGTCATTGGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GFSVWSWLPRQELVLETMGSHTH*LTSLVT Trigger: CGTGACCAATGACGTCAAGCAGTGGGTATGGCTTCC...CATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| 3UTR CAA 72 bp | GCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTaGTTCTGGAGACCATGCTGGCCTAAAACTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLCGPGCPGRN*FWRPCWPKTQR Trigger: TCTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAGACTCCACTAGAGTaGGGGTTCTGGAAATGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGTAVGSLPELCSVEESRQTPLE*GFWKCR Trigger: ACGGCATTTCCAGAACCCTCACTCTAGTGGAGTCTG...CCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | GGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAACTCCATCTGGCTCGATaGTGGTGTCTTGTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTAVGSLPELCSVEESRQLHLAR*WCLVLH Trigger: GTGGAGAACAAGACACCAGCATCGAGCCAGATGGAG...TTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACGACAAATTTCTTAGCTaGTCGTCTTATGCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLLCVVLAAPAGTCSGDDKFLS*SSYAAS Trigger: AGAAGCGGCATAAGACGAGCAGCTAAGAAATTTGTC...GTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACCATGGCAATCTGTTTAAGATaGAGGTCACCATTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSVWSWLPRQELVLETMAICLR*RSPFFP Trigger: TGGGAAAAATGGTGACCTTCATCTTAAACAGATTGC...CATGGTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTACTCAACCTGGTTGGTGCCCAATCACCTGTAACTTCAGCTTCAGCATATTCCCAGCTGTTGGGGTaGTCGGCACAGTGTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVLNLVGAQSPVTSASAYSQLLG*SAQCLE Trigger: CTCCAAACACTGTGCCGACCACCCCAACAGCTGGGA...ATATGCTGAAGCTGAAGTTACAGGTGATTGGGCACCAACCAGGTTGAGTACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CCA 90 bp | TTGATAGGTCGTTTGAGTCTGGTTCCCGTGTTATCTCTGAGGACAGCACATCCAACGGGTTTCCCACCATaGGAAGGTGCTGCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIGRLSLVPVLSLRTAHPTGFPP*EGAAEV Trigger: CACCTCAGCAGCACCTTCCCATGGTGGGAAACCCGT...TGGATGTGCTGTCCTCAGAGATAACACGGGAACCAGACTCAAACGACCTATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCGCAAGGATTCCGATTaGACATTTGGAAATACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTAVGSLPELCSVEESRRKDSD*TFGNTV Trigger: CACCGTATTTCCAAATGTTCAATCGGAATCCTTGCG...CCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR TCA 90 bp | CCTAAAACTCAGAGATCCACCTGCCTCTGCCTTCCAAGCAATGGGATTAAAGATGCCATACCCACTGCTTaGCGTCATTGGTCACGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PKTQRSTCLCLPSNGIKDAIPTA*RHWSRT Trigger: CGTCCGTGACCAATGACGTCAAGCAGTGGGTATGGC...ATCTTTAATCCCATTGCTTGGAAGGCAGAGGCAGGTGGATCTCTGAGTTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| 3UTR CAA 72 bp | TGCTCATCCCAGCTGTTGGGGTGGTCGGCACAGTGTTaGGAGAGGAATGTTTTGATGGTGCTAGGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSQLLGWSAQC*ERNVLMVLGVF Trigger: AAACACACCTAGCACCATCAAAACATTCCTCTCCAAACACTGTGCCGACCACCCCAACAGCTGGGATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138142.8 ENSMUST00000189031.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGACTGTGCGCTTATAGTATaGAATCTGTTTAAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLLCVVLAAPAGTCSGDCALIV*NLFKMK Trigger: CTTCATCTTAAACAGATTGCATACTATAAGCGCACA...GTCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGAATGTAGTCGTGATCTaGCACTATCGAACCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGTAVGSLPELCSVEESRNVVVI*HYRTLQ Trigger: TTGCAAGGTTCGATAGTGGCAGATCACGACTACATT...CCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAAGCAATCTGTTTAAGATaGAGGTCACCATTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTAVGSLPELCSVEESRQAICLR*RSPFFP Trigger: TGGGAAAAATGGTGACCTTCATCTTAAACAGATTGC...TTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAAAAGTACTCGAGAACTTaGTTTGAAGAATCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAVGSLPELCSVEESRQKYSRT*FEESSR Trigger: CCTACTGGATTCTTCAAATCAAGTTCTCGAGTACTT...TTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR TCA 90 bp | CCAGTACTCAACCTGGTTGGTGCCCAATCACCTGTAACTTCAGCTTCAGCATATTTATTTTCCACTGCTTaGCGTCATTGGTCACGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PVLNLVGAQSPVTSASAYLFSTA*RHWSRT Trigger: CGTCCGTGACCAATGACGTCAAGCAGTGGAAAATAA...ATATGCTGAAGCTGAAGTTACAGGTGATTGGGCACCAACCAGGTTGAGTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR TCA 90 bp | GTACTCAACCTGGTTGGTGCCCAATCACCTGTAACTTCAGCTTCAGCATATCCATTCCCGTGTTATCTCTaGGGACAGCACATCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLVGAQSPVTSASAYPFPCYL*GQHIHF Trigger: AAAGTGGATGTGCTGTCCTCAGAGATAACACGGGAA...TGGATATGCTGAAGCTGAAGTTACAGGTGATTGGGCACCAACCAGGTTGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAGTGACTTCATTGAGGTGACAAAGAGACAATCACTTTATCGACCATGTCCGACCCACTCAGACTaGAAGCGGCCATCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EESDFIEVTKRQSLYRPCPTHSD*KRPSFH Trigger: GTGGAAGGATGGCCGCTTCCAGTCTGAGTGGGTCGG...ACATGGTCGATAAAGTGATTGTCTCTTTGTCACCTCAATGAAGTCACTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | GTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGTGTGCGCTTATAGTATaGAATCTGTTTAAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGTAVGSLPELCSVEESRCALIV*NLFKMK Trigger: CTTCATCTTAAACAGATTGCATACTATAAGCGCACA...CCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CCA 90 bp | TTTATCGACCATGTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTATTCTCAAGAGAACTGTaGTCTTCTACCAATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIDHVGTAVGSLPELCSVFSREL*SSTNAE Trigger: CTCTGCATTGGTAGAAGACCACAGTTCTCTTGAGAA...TACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTACATGGTCGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CCA 90 bp | GTACTCAACCTGGTTGGTGCCCAATCACCTGTAACTTCAGCTTCAGCATATCCAAGGTGTGTTTTCAGCTaGATTAACACTTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLVGAQSPVTSASAYPRCVFS*INTSRS Trigger: GCTTCTGGAAGTGTTAATCCAGCTGAAAACACACCT...TGGATATGCTGAAGCTGAAGTTACAGGTGATTGGGCACCAACCAGGTTGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR TCA 90 bp | ATAGGGCCTAAGGTGGGACATTTTGATAGGTCGTTTGAGTCTGGTTCCCGTGTTGCAATCTGTTTAAGATaGAGGTCACCATTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGPKVGHFDRSFESGSRVAICLR*RSPFFP Trigger: TGGGAAAAATGGTGACCTTCATCTTAAACAGATTGC...AACACGGGAACCAGACTCAAACGACCTATCAAAATGTCCCACCTTAGGCCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCTATCTGCAATGTCTTTGGTTTGTGTACAAGGTCAGAGACTTCATTCTTGACTGTCCTGCTCACTaGACTCTCTCACATAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EFYLQCLWFVYKVRDFILDCPAH*TLSHRA Trigger: GGCCCTATGTGAGAGAGTCCAGTGAGCAGGACAGTC...AAGAATGAAGTCTCTGACCTTGTACACAAACCAAAGACATTGCAGATAGAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | AGAGACTTCATTCTTTCCCTGACAGTCACTTGTCCTTCAGCTGGAGTGTGCTCTATTATTATTTTCCACTaGTTGACGTCATTGGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RDFILSLTVTCPSAGVCSIIIFH*LTSLVT Trigger: CGTGACCAATGACGTCAAGCAGTGGAAAATAATAAT...AGAGCACACTCCAGCTGAAGGACAAGTGACTGTCAGGGAAAGAATGAAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAGTGACTTCATTGAGGTGACAAAGAGACAATCACTTTATCGACCATGTCACTTGTACCTTCACTaGCCTCTTCAGGAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: EESDFIEVTKRQSLYRPCHLYLH*PLQEDT Trigger: AGTGTCCTCCTGAAGAGGGCAGTGAAGGTACAAGTG...ACATGGTCGATAAAGTGATTGTCTCTTTGTCACCTCAATGAAGTCACTTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | CCAGTACTCAACCTGGTTGGTGCCCAATCACCTGTAACTTCAGCTTCAGCATATGTGGTCTTCTACCAATaGAGAGATTTTGGAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLNLVGAQSPVTSASAYVVFYQ*RDFGIS Trigger: AGAAATTCCAAAATCTCTGCATTGGTAGAAGACCAC...ATATGCTGAAGCTGAAGTTACAGGTGATTGGGCACCAACCAGGTTGAGTACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| 3UTR CAA 72 bp | AGGACACTCCAACACGCAAGGATTCCGATTGAACATTaGGAAATACGGTGTGTTTTTATTAGGCTCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLQHARIPIEH*EIRCVFIRLQV Trigger: CACTTGGAGCCTAATAAAAACACACCGTATTTCCAAATGTTCAATCGGAATCCTTGCGTGTTGGAGTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
||
| CDS-3UTR GCA 90 bp | GTACTCAACCTGGTTGGTGCCCAATCACCTGTAACTTCAGCTTCAGCATATCCAAGCTATCCCAATAGTTaGATCTTCTACCAGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLVGAQSPVTSASAYPSYPNS*IFYQNI Trigger: AATATTCTGGTAGAAGATGCAACTATTGGGATAGCT...TGGATATGCTGAAGCTGAAGTTACAGGTGATTGGGCACCAACCAGGTTGAGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR TCA 90 bp | TTGGAGAGGAATGTTTTGATGGTGCTAGGTGTGTTTTCAGCTGGATTAACACTTGCTACTTGGCAATGCTaGCAAGCATATACCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LERNVLMVLGVFSAGLTLATWQC*QAYTFE Trigger: TTCAAAGGTATATGCTTGTCAGCATTGCCAAGTAGC...AAGTGTTAATCCAGCTGAAAACACACCTAGCACCATCAAAACATTCCTCTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAGTGACTTCATTGAGGTGACAAAGAGACAATCACTTTATCGACCATGTTTATTAGGCTCCAAGTaGGTGACATTGAAGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EESDFIEVTKRQSLYRPCLLGSK*VTLKAK Trigger: CTTTGCCTTCAATGTCACTCACTTGGAGCCTAATAA...ACATGGTCGATAAAGTGATTGTCTCTTTGTCACCTCAATGAAGTCACTTTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | GCTAGGTGTGTTTTCAGCTGGATTAACACTTCCAGAAGCACGAGAAATTACAATAAGGTGCTGCTGAGGTaGTACGATAACTGTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARCVFSWINTSRSTRNYNKVLLR*YDNCIF Trigger: AAAAATACAGTTATCGTAGCACCTCAGCAGCACCTT...ATTGTAATTTCTCGTGCTTCTGGAAGTGTTAATCCAGCTGAAAACACACCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCTATCTGCAATGTCTTTGGTTTGTGTACAAGGTCAGAGACTTCATTCTTGACAAATTTCTTAGCTaGTCGTCTTATGCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFYLQCLWFVYKVRDFILDKFLS*SSYAAS Trigger: AGAAGCGGCATAAGACGAGCAGCTAAGAAATTTGTC...AAGAATGAAGTCTCTGACCTTGTACACAAACCAAAGACATTGCAGATAGAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR GCA 90 bp | TTGGAGAGGAATGTTTTGATGGTGCTAGGTGTGTTTTCAGCTGGATTAACACTTTGTGCGCTTATAGTATaGAATCTGTTTAAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LERNVLMVLGVFSAGLTLCALIV*NLFKMK Trigger: CTTCATCTTAAACAGATTGCATACTATAAGCGCACA...AAGTGTTAATCCAGCTGAAAACACACCTAGCACCATCAAAACATTCCTCTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138142.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGGCTTCTCTGTGTGGTCCTGGCTGCCCCGGCAGGAACTTGTTCTGGAGAAGCCATACCCACTGCTaGACGTCATTGGTCACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DRASLCGPGCPGRNLFWRSHTHC*TSLVTD Trigger: GTCCGTGACCAATGACGTCAAGCAGTGGGTATGGCT...TCTCCAGAACAAGTTCCTGCCGGGGCAGCCAGGACCACACAGAGAAGCCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112842.8 |
||
| CDS TCA 90 bp | CGTCATTGGTCACGGACGTCCAGTAGTAGCCAGACTCCACTAGAGTaGGGGTTCTGGAAATGCCGTGATGGACACCAGGGCCATTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RHWSRTSSSSQTPLE*GFWKCRDGHQGHSH Trigger: ATGAGAATGGCCCTGGTGTCCATCACGGCATTTCCAGAACCCTCACTCTAGTGGAGTCTGGCTACTACTGGACGTCCGTGACCAATGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027571.13 ENSMUST00000112842.8 ENSMUST00000112844.10 ENSMUST00000189031.2 |
||
| CDS-3UTR CAA 90 bp | GGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAATGGTCGGCACAGTGTTaGGAGAGGAATGTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTAVGSLPELCSVEESRQWSAQC*ERNVLM Trigger: CATCAAAACATTCCTCTCCAAACACTGTGCCGACCA...TTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CAA 90 bp | GTAGGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCTCAGTTCATCCGAATaGTTGTTCTCCATCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTAVGSLPELCSVEESRLSSSE*LFSIWL Trigger: GAGCCAGATGGAGAACAACAATTCGGATGAACTGAG...CCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CAA 90 bp | GGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAAAGTTCATCCGAATTGTaGTTCTCCATCTGGCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GTAVGSLPELCSVEESRQSSSEL*FSIWLD Trigger: ATCGAGCCAGATGGAGAACAACAATTCGGATGAACT...TTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CAA 90 bp | GGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAATTGGAGAGGAATGTTTaGATGGTGCTAGGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GTAVGSLPELCSVEESRQLERNV*MVLGVF Trigger: AAACACACCTAGCACCATCAAAACATTCCTCTCCAA...TTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CAA 90 bp | GGCACTGCAGTAGGCTCCCTTCCTGAACTCTGCTCTGTAGAGGAGAGTAGGCAACTTCTACCAGAATATTaGCCTGGTATGTTCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GTAVGSLPELCSVEESRQLLPEY*PGMFQL Trigger: CAGTTGGAACATACCAGGCAAATATTCTGGTAGAAG...TTGCCTACTCTCCTCTACAGAGCAGAGTTCAGGAAGGGAGCCTACTGCAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAGTGACTTCATTGAGGTGACAAAGAGACAATCACTTTATCGACCATGTCTAAGGTGGGACATTTaGATAGGTCGTTTGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EESDFIEVTKRQSLYRPCLRWDI*IGRLSL Trigger: CAGACTCAAACGACCTATCAAAATGTCCCACCTTAG...ACATGGTCGATAAAGTGATTGTCTCTTTGTCACCTCAATGAAGTCACTTTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027571.13 |
||
| CDS TCA 90 bp | ATAACCCATTTTGTGAACAAATCTGTCATGATTATAGCATACACATaGCTTCTGTTGCTTGTATGGAAAGGTCCCATCAGATCAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ITHFVNKSVMIIAYT*LLLLVWKGPIRSTV Trigger: TACTGTTGATCTGATGGGACCTTTCCATACAAGCAACAGAAGTCATGTGTATGCTATAATCATGACAGATTTGTTCACAAAATGGGTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112844.10 |
||
| CDS TCA 72 bp | CCAGACTCCACTAGAGTGAGGGTTCTGGAAATGCCGTaGTGGACACCAGGGCCATTCTCATGGCACTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PDSTRVRVLEMP*WTPGPFSWHSL Trigger: GAGAGAGTGCCATGAGAATGGCCCTGGTGTCCATCACGGCATTTCCAGAACCCTCACTCTAGTGGAGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027571.13 ENSMUST00000112842.8 ENSMUST00000112844.10 ENSMUST00000189031.2 |
||