Pregenerated sensors for GIMAP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043931Ensembl transcript IDs: ENSMUST00000052503.8, ENSMUST00000204785.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAAGCAGTGTTTATTTGGGCTCATGGTTACAGAGGCATTTCAGTaGATCATAGTGGGAACGGTAGGACAGGCTAGCATTGGGAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: GKQCLFGLMVTEAFQ*IIVGTVGQASIGSR Trigger: TCTGCTCCCAATGCTAGCCTGTCCTACCGTTCCCACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAATAAACACTGCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGCTAGCATTGGGAGCAGAGGGCCGAGTGTGATCCATCCAGCCTTGGAGCCTGGCACTGAGCCCTaGCTCTGGTACACTGAATCC | + |
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Preference number: 2 (lower is better) Translates to: GQASIGSRGPSVIHPALEPGTEP*LWYTES Trigger: GGATTCAGTGTACCAGAGTCAGGGCTCAGTGCCAGG...CTCCAAGGCTGGATGGATCACACTCGGCCCTCTGCTCCCAATGCTAGCCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTGGGAACTGGTCAGGAGTGAGGTaGAAAAATGCGCAGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VFIWAHGYRGISVHHSGNWSGVR*KNAQKK Trigger: CTTCTTCTGCGCATTTTTCCACCTCACTCCTGACCA...GTTCCCACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAATAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTGGGAACGGTAGGGGTACACTGAATCCCTaGCTTTGCTATCTCTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: IWAHGYRGISVHHSGNGRGTLNP*LCYLLN Trigger: ATTTAAGAGATAGCAAAGCCAGGGATTCAGTGTACC...CCTACCGTTCCCACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGAGGGCCGAGTGTGATCCATCCAGCCTTGGAGCCTGGCACTGAGCCCGTGAAGCGGTTCAGTTaGAGAACCAGAATGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSRGPSVIHPALEPGTEPVKRFS*RTRMMA Trigger: TGCCATCATTCTGGTTCTGCAACTGAACCGCTTCAC...GGGCTCAGTGCCAGGCTCCAAGGCTGGATGGATCACACTCGGCCCTCTGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR TCA 90 bp | CTGTTAGAAAAGGGTCAGCAGGGAGAGTGGTCAGGAGTGAGGTGGAAAAATGCGACCAGAATGATGGCATaGGGCCCAGGGCAGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LLEKGQQGEWSGVRWKNATRMMA*GPGQDW Trigger: CCAGTCCTGCCCTGGGCCTCATGCCATCATTCTGGT...CGCATTTTTCCACCTCACTCCTGACCACTCTCCCTGCTGACCCTTTTCTAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGAGGGCCGAGTGTGATCCATCCAGCCTTGGAGCCTGGCACTGAGCCCGAATATGTTCTTCTCTaGTTCCTCACGAAGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GSRGPSVIHPALEPGTEPEYVLL*FLTKVS Trigger: AGAAACCTTCGTGAGGAAGCAGAGAAGAACATATTC...GGGCTCAGTGCCAGGCTCCAAGGCTGGATGGATCACACTCGGCCCTCTGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | GAAAAGGGTCAGCAGGGAGAGTGGTCAGGAGTGAGGTGGAAAAATGCGCAGAAGCTCTTTCCTTCCACCTaGGGGAGTCACTCTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: EKGQQGEWSGVRWKNAQKLFPST*GSHSDS Trigger: ACTGTCAGAGTGACTCCCGCAGGTGGAAGGAAAGAG...CTTCTGCGCATTTTTCCACCTCACTCCTGACCACTCTCCCTGCTGACCCTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR CCA 90 bp | CAAATGGCTGTTAGAAAAGGGTCAGCAGGGAGAGTGGTCAGGAGTGAGGTGGAAGGATGGTGTTTGCTGTaGCGCTCTTTCCACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QMAVRKGSAGRVVRSEVEGWCLL*RSFHFL Trigger: CAGGAAGTGGAAAGAGCGCCACAGCAAACACCATCC...TTCCACCTCACTCCTGACCACTCTCCCTGCTGACCCTTTTCTAACAGCCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | GAAAAGGGTCAGCAGGGAGAGTGGTCAGGAGTGAGGTGGAAAAATGCGCAGAAGAGACCACCATTGTTCTaGACCAGGGTTTCTACAAGC | + |
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Preference number: 4 (lower is better) Translates to: EKGQQGEWSGVRWKNAQKRPPLF*TRVSTS Trigger: GCTTGTAGAAACCCTGGTGCAGAACAATGGTGGTCT...CTTCTGCGCATTTTTCCACCTCACTCCTGACCACTCTCCCTGCTGACCCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR TCA 90 bp | GTGTTTATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTGGGAACGTTGCAGAACCAGAATaGTGGCATGAGGCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VFIWAHGYRGISVHHSGNVAEPE*WHEAQG Trigger: GCCCTGGGCCTCATGCCATCATTCTGGTTCTGCAAC...GTTCCCACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAATAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTGGGAACATCAGCTCCTGCACCTaGGTTTCCCTCTCAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VFIWAHGYRGISVHHSGNISSCT*VSLSAL Trigger: GAGGGCTGAGAGGGAAACGCAGGTGCAGGAGCTGAT...GTTCCCACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAATAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR TCA 90 bp | TGTTTATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTGGGAACGTCTCTGCTTTGTTATTaGTGGCCAGGCAGCGATTGC | + |
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Preference number: 4 (lower is better) Translates to: CLFGLMVTEAFQCIIVGTSLLCY*WPGSDC Trigger: GCAATCGCTGCCTGGCCATCAATAACAAAGCAGAGA...CGTTCCCACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAATAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | TATCTCTTAAATCTGCAAATGGCTGTTAGAAAAGGGTCAGCAGGGAGAGTGGTCCCTCTCAGCCCTCTCTaGTTTGTTATTGATGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YLLNLQMAVRKGSAGRVVPLSPL*FVIDGQ Trigger: CTGGCCATCAATAACAAAGCAGAGAGGGCTGAGAGG...GACCACTCTCCCTGCTGACCCTTTTCTAACAGCCATTTGCAGATTTAAGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | GTTACAGAGGCATTTCAGTGCATCATAGTGGGAACGGTAGGACAGGCTAGCATTGAAACAAATCTCTTTTaGCCCAGGATGGTGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VTEAFQCIIVGTVGQASIETNLF*PRMVFA Trigger: AGCAAACACCATCCTGGGGCAAAAGAGATTTGTTTC...AATGCTAGCCTGTCCTACCGTTCCCACTATGATGCACTGAAATGCCTCTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR CCA 90 bp | AATCCCTGGCTTTGCTATCTCTTAAATCTGCAAATGGCTGTTAGAAAAGGGTCATCTTTTGCCCCAGGATaGTGTTTGCTGTGGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPWLCYLLNLQMAVRKGSSFAPG*CLLWRS Trigger: AGAGCGCCACAGCAAACACCATCCTGGGGCAAAAGA...TGACCCTTTTCTAACAGCCATTTGCAGATTTAAGAGATAGCAAAGCCAGGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | TATCTCTTAAATCTGCAAATGGCTGTTAGAAAAGGGTCAGCAGGGAGAGTGGTCGGTGACAGCATGGGGTaGGATTCTAGAAACAAATCT | + |
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Preference number: 4 (lower is better) Translates to: YLLNLQMAVRKGSAGRVVGDSMG*DSRNKS Trigger: AGATTTGTTTCTAGAATCGCACCCCATGCTGTCACC...GACCACTCTCCCTGCTGACCCTTTTCTAACAGCCATTTGCAGATTTAAGAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR GCA 90 bp | AATCCCTGGCTTTGCTATCTCTTAAATCTGCAAATGGCTGTTAGAAAAGGGTCACTCAAGATCTCCACTTaGTTCTTCAGCCTTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NPWLCYLLNLQMAVRKGSLKIST*FFSLRS Trigger: GGAGCGAAGGCTGAAGAAGCAAGTGGAGATCTTGAG...TGACCCTTTTCTAACAGCCATTTGCAGATTTAAGAGATAGCAAAGCCAGGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR CCA 90 bp | GAAGCAGTGTTTATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTAAGTCGCTTAAGCTCTaGTCCTCCAGATCATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EAVFIWAHGYRGISVHHSKSLKL*SSRSSL Trigger: CAAAGATGATCTGGAGGACCAGAGCTTAAGCGACTT...ACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAATAAACACTGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR CAA 90 bp | GAAAAGGGTCAGCAGGGAGAGTGGTCAGGAGTGAGGTGGAAAAATGCGCAGAAGCGTGAAGCGGTTCAGTaGCAGAACCAGAATGATGGC | + |
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Preference number: 5 (lower is better) Translates to: EKGQQGEWSGVRWKNAQKREAVQ*QNQNDG Trigger: GCCATCATTCTGGTTCTGCAACTGAACCGCTTCACG...CTTCTGCGCATTTTTCCACCTCACTCCTGACCACTCTCCCTGCTGACCCTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR CAA 90 bp | CAAATGGCTGTTAGAAAAGGGTCAGCAGGGAGAGTGGTCAGGAGTGAGGTGGAAATGGCCAGGCAGCGATaGCCACACTCCTTGATGATG | + |
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Preference number: 5 (lower is better) Translates to: QMAVRKGSAGRVVRSEVEMARQR*PHSLMM Trigger: CATCATCAAGGAGTGTGGCAATCGCTGCCTGGCCAT...TTCCACCTCACTCCTGACCACTCTCCCTGCTGACCCTTTTCTAACAGCCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS GCA 90 bp | TTCTGGGTGACAGCATGGGGTGCGATTCTAGAAACAAATCTCTTTTaGCCCAGGATGGTGTTTGCTGTGGCGCTCTTTCCACTTCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: FWVTAWGAILETNLF*PRMVFAVALFPLPV Trigger: AACAGGAAGTGGAAAGAGCGCCACAGCAAACACCATCCTGGGGCAAAAGAGATTTGTTTCTAGAATCGCACCCCATGCTGTCACCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052503.8 ENSMUST00000204785.2 |
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| CDS-3UTR CAA 90 bp | ATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTGGGAACGGTAGGCCTCAAGATCTCCACTaGCTTCTTCAGCCTTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: IWAHGYRGISVHHSGNGRPQDLH*LLQPSL Trigger: GAGCGAAGGCTGAAGAAGCAAGTGGAGATCTTGAGG...CCTACCGTTCCCACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CCA 90 bp | CTTTTCAGGTTTGTATCTGAGTCAGCAATGAAGTCGCTTAAGCTCTaGTCCTCCAGATCATCTTTGCGGGTGAACAAGACAATCATGTAC | + |
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Preference number: 5 (lower is better) Translates to: LFRFVSESAMKSLKL*SSRSSLRVNKTIMY Trigger: GTACATGATTGTCTTGTTCACCCGCAAAGATGATCTGGAGGACCAGAGCTTAAGCGACTTCATTGCTGACTCAGATACAAACCTGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS-3UTR CAA 90 bp | GAAGCAGTGTTTATTTGGGCTCATGGTTACAGAGGCATTTCAGTGCATCATAGTCGATTGCCACACTCCTaGATGATGCTTTTCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: EAVFIWAHGYRGISVHHSRLPHS*MMLFRF Trigger: AAACCTGAAAAGCATCATCAAGGAGTGTGGCAATCG...ACTATGATGCACTGAAATGCCTCTGTAACCATGAGCCCAAATAAACACTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS TCA 72 bp | CATGAGGCCCAGGGCAGGACTGGAGGACACACCGGCTaGTTTCAAGGCAGGTGGTTTCCAGTTTTACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HEAQGRTGGHTG*FQGRWFPVLPW Trigger: CCAAGGTAAAACTGGAAACCACCTGCCTTGAAATCAGCCGGTGTGTCCTCCAGTCCTGCCCTGGGCCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS GCA 72 bp | TTCTGCACCAGGGTTTCTACAAGCCCCATCAGCTCCTaGACCTGCGTTTCCCTCTCAGCCCTCTCTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: FCTRVSTSPISS*TCVSLSALSAL Trigger: CAAAGCAGAGAGGGCTGAGAGGGAAACGCAGGTGCAGGAGCTGATGGGGCTTGTAGAAACCCTGGTGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 72 bp | TCCTGCACCTGCGTTTCCCTCTCAGCCCTCTCTGCTTaGTTATTGATGGCCAGGCAGCGATTGCCACACTCC | + |
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Preference number: 6 (lower is better) Translates to: SCTCVSLSALSA*LLMARQRLPHS Trigger: GGAGTGTGGCAATCGCTGCCTGGCCATCAATAACAAAGCAGAGAGGGCTGAGAGGGAAACGCAGGTGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 90 bp | CCCATCAGCTCCTGCACCTGCGTTTCCCTCTCAGCCCTCTCTGCTTaGTTATTGATGGCCAGGCAGCGATTGCCACACTCCTTGATGATG | + |
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Preference number: 6 (lower is better) Translates to: PISSCTCVSLSALSA*LLMARQRLPHSLMM Trigger: CATCATCAAGGAGTGTGGCAATCGCTGCCTGGCCATCAATAACAAAGCAGAGAGGGCTGAGAGGGAAACGCAGGTGCAGGAGCTGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS TCA 72 bp | AGGAGGTCTCTTTCCTTCCACCTGCGGGAGTCACTCTaGCAGTTCTGGGTGACAGCATGGGGTGCGATTCTA | + |
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Preference number: 6 (lower is better) Translates to: RRSLSFHLRESL*QFWVTAWGAIL Trigger: TAGAATCGCACCCCATGCTGTCACCCAGAACTGTCAGAGTGACTCCCGCAGGTGGAAGGAAAGAGACCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052503.8 ENSMUST00000204785.2 |
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| CDS GCA 72 bp | ACCAGGGTTTCTACAAGCCCCATCAGCTCCTGCACCTaGGTTTCCCTCTCAGCCCTCTCTGCTTTGTTATTG | + |
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Preference number: 6 (lower is better) Translates to: TRVSTSPISSCT*VSLSALSALLL Trigger: CAATAACAAAGCAGAGAGGGCTGAGAGGGAAACGCAGGTGCAGGAGCTGATGGGGCTTGTAGAAACCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 72 bp | ACCTGCGTTTCCCTCTCAGCCCTCTCTGCTTTGTTATaGATGGCCAGGCAGCGATTGCCACACTCCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: TCVSLSALSALL*MARQRLPHSLM Trigger: CATCAAGGAGTGTGGCAATCGCTGCCTGGCCATCAATAACAAAGCAGAGAGGGCTGAGAGGGAAACGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 90 bp | GATCCTGATAACAGTTTCTTGCTCTTCCACCGTGAAGCGGTTCAGTaGCAGAACCAGAATGATGGCATGAGGCCCAGGGCAGGACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DPDNSFLLFHREAVQ*QNQNDGMRPRAGLE Trigger: CTCCAGTCCTGCCCTGGGCCTCATGCCATCATTCTGGTTCTGCAACTGAACCGCTTCACGGTGGAAGAGCAAGAAACTGTTATCAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 72 bp | CGGCTGATTTCAAGGCAGGTGGTTTCCAGTTTTACCTaGGTGTCGAAGAGCCCTGGGGTATCAACAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: RLISRQVVSSFT*VSKSPGVSTTR Trigger: CCTGGTTGTTGATACCCCAGGGCTCTTCGACACCAAGGTAAAACTGGAAACCACCTGCCTTGAAATCAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052503.8 ENSMUST00000204785.2 |
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| CDS CAA 72 bp | AACAGTTTCTTGCTCTTCCACCGTGAAGCGGTTCAGTaGCAGAACCAGAATGATGGCATGAGGCCCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: NSFLLFHREAVQ*QNQNDGMRPRA Trigger: TGCCCTGGGCCTCATGCCATCATTCTGGTTCTGCAACTGAACCGCTTCACGGTGGAAGAGCAAGAAACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 90 bp | AGGACACACCGGCTGATTTCAAGGCAGGTGGTTTCCAGTTTTACCTaGGTGTCGAAGAGCCCTGGGGTATCAACAACCAGGAGGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RTHRLISRQVVSSFT*VSKSPGVSTTRRSL Trigger: AAGAGACCTCCTGGTTGTTGATACCCCAGGGCTCTTCGACACCAAGGTAAAACTGGAAACCACCTGCCTTGAAATCAGCCGGTGTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052503.8 ENSMUST00000204785.2 |
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| CDS CAA 90 bp | GTTCTGGGTGACAGCATGGGGTGCGATTCTAGAAACAAATCTCTTTaGCCCCAGGATGGTGTTTGCTGTGGCGCTCTTTCCACTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VLGDSMGCDSRNKSL*PQDGVCCGALSTSC Trigger: ACAGGAAGTGGAAAGAGCGCCACAGCAAACACCATCCTGGGGCAAAAGAGATTTGTTTCTAGAATCGCACCCCATGCTGTCACCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052503.8 ENSMUST00000204785.2 |
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| CDS CAA 72 bp | GACAGCATGGGGTGCGATTCTAGAAACAAATCTCTTTaGCCCCAGGATGGTGTTTGCTGTGGCGCTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: DSMGCDSRNKSL*PQDGVCCGALS Trigger: GGAAAGAGCGCCACAGCAAACACCATCCTGGGGCAAAAGAGATTTGTTTCTAGAATCGCACCCCATGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052503.8 ENSMUST00000204785.2 |
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| CDS CAA 90 bp | TCCCTCTCAGCCCTCTCTGCTTTGTTATTGATGGCCAGGCAGCGATaGCCACACTCCTTGATGATGCTTTTCAGGTTTGTATCTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSALSALLLMARQR*PHSLMMLFRFVSES Trigger: TGACTCAGATACAAACCTGAAAAGCATCATCAAGGAGTGTGGCAATCGCTGCCTGGCCATCAATAACAAAGCAGAGAGGGCTGAGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 72 bp | GCCCTCTCTGCTTTGTTATTGATGGCCAGGCAGCGATaGCCACACTCCTTGATGATGCTTTTCAGGTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: ALSALLLMARQR*PHSLMMLFRFV Trigger: TACAAACCTGAAAAGCATCATCAAGGAGTGTGGCAATCGCTGCCTGGCCATCAATAACAAAGCAGAGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 90 bp | CTCTCTGCTTTGTTATTGATGGCCAGGCAGCGATTGCCACACTCCTaGATGATGCTTTTCAGGTTTGTATCTGAGTCAGCAATGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LSALLLMARQRLPHS*MMLFRFVSESAMKS Trigger: CGACTTCATTGCTGACTCAGATACAAACCTGAAAAGCATCATCAAGGAGTGTGGCAATCGCTGCCTGGCCATCAATAACAAAGCAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 72 bp | TTGTTATTGATGGCCAGGCAGCGATTGCCACACTCCTaGATGATGCTTTTCAGGTTTGTATCTGAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLLMARQRLPHS*MMLFRFVSESA Trigger: TGCTGACTCAGATACAAACCTGAAAAGCATCATCAAGGAGTGTGGCAATCGCTGCCTGGCCATCAATAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS CAA 72 bp | ATCATGTACTTCATGACTTCCTCCCCAAAGATAGCCTaGATCCTGATAACAGTTTCTTGCTCTTCCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: IMYFMTSSPKIA*ILITVSCSSTV Trigger: CACGGTGGAAGAGCAAGAAACTGTTATCAGGATCAAGGCTATCTTTGGGGAGGAAGTCATGAAGTACATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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| CDS GCA 72 bp | AACTTCTTCAATAATCTGGTTGAATATGTTCTTCTCTaGTTCCTCACGAAGGTTTCTTATCTTCAGATTGTA | + |
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Preference number: 6 (lower is better) Translates to: NFFNNLVEYVLL*FLTKVSYLQIV Trigger: TACAATCTGAAGATAAGAAACCTTCGTGAGGAAGCAGAGAAGAACATATTCAACCAGATTATTGAAGAAGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052503.8 |
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