Pregenerated sensors for GIMAP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047867Ensembl transcript IDs: ENSMUST00000053661.7, ENSMUST00000119315.2, ENSMUST00000126422.3
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGGATGAGGACAGCAGTAGTGACAAAGGCCAGCACCTGTCCCTaGGGTCTGCCCTGGGCTTACATTCTCAGCCTGCATCCTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PRMRTAVVTKASTCP*GLPWAYILSLHPGR Trigger: CCTTCCAGGATGCAGGCTGAGAATGTAAGCCCAGGGCAGACCCCAGGGACAGGTGCTGGCCTTTGTCACTACTGCTGTCCTCATCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR TCA 90 bp | GTACCGGCCTACCTGTATCACCAGCAGCACTGCATGGGGCCCTGGTaGGGCCAAGAGGTCACAGATCTTCTTAGCTGTTGCCTCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VPAYLYHQQHCMGPW*GQEVTDLLSCCLRL Trigger: CAGCCTGAGGCAACAGCTAAGAAGATCTGTGACCTCTTGGCCTCACCAGGGCCCCATGCAGTGCTGCTGGTGATACAGGTAGGCCGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR CCA 90 bp | CTGTCCCTGGGGTCTGCCCTGGGCTTACATTCTCAGCCTGCATCCTaGAAGGTGGAAGTGAACATTCTTACCAAGGGGACATCAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSLGSALGLHSQPAS*KVEVNILTKGTSEP Trigger: TGGCTCTGATGTCCCCTTGGTAAGAATGTTCACTTCCACCTTCCAGGATGCAGGCTGAGAATGTAAGCCCAGGGCAGACCCCAGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR GCA 90 bp | AAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTaGCTCAGTACCTACAGGGCTTCTCAGAGGCCATCTGAATCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KTLLLMASLVHMDAL*LSTYRASQRPSESG Trigger: CCCAGATTCAGATGGCCTCTGAGAAGCCCTGTAGGTACTGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR CCA 90 bp | GACTTATGGTGGAGCACAGGGGAGACAGCACACAGGGGATGGCTCTaGGTTGGCTCTCTCATATTTGACTCCTCAGGATCTCTGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: DLWWSTGETAHRGWL*VGSLIFDSSGSLLC Trigger: ACACAGCAGAGATCCTGAGGAGTCAAATATGAGAGAGCCAACCCAGAGCCATCCCCTGTGTGCTGTCTCCCCTGTGCTCCACCATAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR TCA 90 bp | GGAGACAGCACACAGGGGATGGCTCTGGGTTGGCTCTCTCATATTTaGCTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GDSTQGMALGWLSHI*LLRISAVSCLSVAR Trigger: TCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAATATGAGAGAGCCAACCCAGAGCCATCCCCTGTGTGCTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR GCA 90 bp | CTGCATGTCTTTCTCAAGGAGGAGCTTAGGTGTGAAGACTCTTTTTaGCTTGGGACTGGCAATTCTTACCTCCCAGGGCCATCACACCTG | + |
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Preference number: 1 (lower is better) Translates to: LHVFLKEELRCEDSF*LGTGNSYLPGPSHL Trigger: CAGGTGTGATGGCCCTGGGAGGTAAGAATTGCCAGTCCCAAGGCAAAAAGAGTCTTCACACCTAAGCTCCTCCTTGAGAAAGACATGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR GCA 90 bp | CATCTGAATCTGGGACAGCCTTTTCAGCCAGGACTCTTTAATGGTTaGCTCCTCAGGGCCTTGCTATTTGGTTACAGTGTCTTGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: HLNLGQPFQPGLFNG*LLRALLFGYSVLLG Trigger: TCCCAGCAAGACACTGTAACCAAATAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTCCTGGCTGAAAAGGCTGTCCCAGATTCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR GCA 90 bp | ATCCCCTTGTGCCTTGTTGTTGAAGCCACAGTGGCGCCTCTCACATaGAACATCCAGAACATCCAGGCTCTTATTGTTGTTCTCTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: IPLCLVVEATVAPLT*NIQNIQALIVVLLN Trigger: ATTCAAGAGAACAACAATAAGAGCCTGGATGTTCTGGATGTTGCATGTGAGAGGCGCCACTGTGGCTTCAACAACAAGGCACAAGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR CCA 90 bp | TCGATCACCTCAAGTTCTTTCCCCTCAAACTCTCTAGTCCCTTTCTaGAATGTCGTGGTCACTGGTCGAGCGCTGATTTTGGATTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SITSSSFPSNSLVPF*NVVVTGRALILDSK Trigger: CTTTGAATCCAAAATCAGCGCTCGACCAGTGACCACGACATTCCAGAAAGGGACTAGAGAGTTTGAGGGGAAAGAACTTGAGGTGATCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR TCA 90 bp | CTTCAGACCTGGAAGAAGTTTACAAAACCAAACACCAGAGGGAGATaGGATGATCCTCTCTGTTTATCAGAGGCCATGCCCCTTAGTACC | + |
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Preference number: 1 (lower is better) Translates to: LQTWKKFTKPNTRGR*DDPLCLSEAMPLST Trigger: GGTACTAAGGGGCATGGCCTCTGATAAACAGAGAGGATCATCTCATCTCCCTCTGGTGTTTGGTTTTGTAAACTTCTTCCAGGTCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR TCA 90 bp | CCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGTTaGCTCTGTTGTAAGACTTGCTTGTGCTTGGTAATCTGTTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: PQDLCCVLPICCKTC*LCCKTCLCLVICSY Trigger: ATAGGAACAGATTACCAAGCACAAGCAAGTCTTACAACAGAGTCAACAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR CCA 90 bp | TGCTATTTGGTTACAGTGTCTTGCTGGGAACATTTGGAAATTCCATaGTGTAACAATGGCCCTCATTTTCCCACAAGATCAATTCGACTT | + |
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Preference number: 1 (lower is better) Translates to: CYLVTVSCWEHLEIP*CNNGPHFPTRSIRL Trigger: AAGTCGAATTGATCTTGTGGGAAAATGAGGGCCATTGTTACACCATGGAATTTCCAAATGTTCCCAGCAAGACACTGTAACCAAATAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTGCCTCAACAGCACACAGGGGATaGCTCTGGGTTGGCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LRHSCLWPAWFTWMPSASTAHRG*LWVGSL Trigger: GAGAGAGCCAACCCAGAGCCATCCCCTGTGTGCTGT...TGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGGCGCCTCTCACATGCAACATCCAGAACATCCAGGCTCTTATTGTTGTTAGGGCTGCTAGGCTCTaGCTTCCACGCCTTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TVAPLTCNIQNIQALIVVRAARL*LPRLLS Trigger: GCTGAGAAGGCGTGGAAGGCAGAGCCTAGCAGCCCT...AACAACAATAAGAGCCTGGATGTTCTGGATGTTGCATGTGAGAGGCGCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTCTGGAATGTCGTGGTCACTGGTCGAGCGCTGATTTTGGATTCAAAGGCGCCTGGTCTACAAAGTaGATTTCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PFLECRGHWSSADFGFKGAWSTK*ISGQPG Trigger: CCCTGGCTGTCCTGAAATTCACTTTGTAGACCAGGC...GCCTTTGAATCCAAAATCAGCGCTCGACCAGTGACCACGACATTCCAGAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGGCGCCTCTCACATGCAACATCCAGAACATCCAGGCTCTTATTGTTGTTCCTGTCCCTGGGGTCTaGCCTGGGCTTACATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: TVAPLTCNIQNIQALIVVPVPGV*PGLTFS Trigger: TGAGAATGTAAGCCCAGGGCAGACCCCAGGGACAGG...AACAACAATAAGAGCCTGGATGTTCTGGATGTTGCATGTGAGAGGCGCCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTGCCTCAAGGCTGGTTCTGAGGTaGAAAAATATCTGGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LRHSCLWPAWFTWMPSASRLVLR*KNIWGV Trigger: GACACCCCAGATATTTTTTCACCTCAGAACCAGCCT...TGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | AATGATAGTTTTCCAAGTGTGGTCCCCAGGGAGAGACTGATGGCTCTCAGATTAACAGCACACAGGGGATaGCTCTGGGTTGGCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: NDSFPSVVPRERLMALRLTAHRG*LWVGSL Trigger: GAGAGAGCCAACCCAGAGCCATCCCCTGTGTGCTGT...TAATCTGAGAGCCATCAGTCTCTCCCTGGGGACCACACTTGGAAAACTATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTGCCTCATTTATTGGGGACTTATaGTGGAGCACAGGGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: LRHSCLWPAWFTWMPSASFIGDL*WSTGET Trigger: TGTCTCCCCTGTGCTCCACCATAAGTCCCCAATAAA...TGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR CAA 90 bp | ATGTCTTTCTCAAGGAGGAGCTTAGGTGTGAAGACTCTTTTTGCCTaGGGACTGGCAATTCTTACCTCCCAGGGCCATCACACCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: MSFSRRSLGVKTLFA*GLAILTSQGHHTCQ Trigger: CTGACAGGTGTGATGGCCCTGGGAGGTAAGAATTGCCAGTCCCAAGGCAAAAAGAGTCTTCACACCTAAGCTCCTCCTTGAGAAAGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGCACATGGATGCCCTCTaGCTCAGTACCTACAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: IFDSSGSLLCPAYLLQDLHMDAL*LSTYRA Trigger: AGCCCTGTAGGTACTGAGGCAGAGGGCATCCATGTG...CAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTGCCTCAGTGTGGGTGTTTGGATaGCTCATCAAGACACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LRHSCLWPAWFTWMPSASVWVFG*LIKTQL Trigger: TAACTGTGTCTTGATGAGGCATCCAAACACCCACAC...TGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACACTGACTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCCAGCACTCAGTGTGTaGTCCCATGTTCATTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: RTLTKTLLLMASLVHMDAPALSV*SHVHLH Trigger: GTGCAAATGAACATGGGACCACACACTGAGTGCTGG...GGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAGTCAGTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATGGTGTAACAATGGCCCTCATTTTCCCACAAGATCAATTCGACTTCCTCTCAGCCCTACCCAGTaGCCACTGAGGACATTCTGC | + |
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Preference number: 2 (lower is better) Translates to: IPWCNNGPHFPTRSIRLPLSPTQ*PLRTFC Trigger: GCAGAATGTCCTCAGTGGTCACTGGGTAGGGCTGAG...AGGAAGTCGAATTGATCTTGTGGGAAAATGAGGGCCATTGTTACACCATGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGTTGGGACTCTTTAATGGTTaGCTCCTCAGGGCCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: FDSSGSLLCPAYLLQDLLGLFNG*LLRALL Trigger: TAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTCC...CAACAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGGCGCCTCTCACATGCAACATCCAGAACATCCAGGCTCTTATTGTTGTTGGACTCTTTAATGGTTaGCTCCTCAGGGCCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: TVAPLTCNIQNIQALIVVGLFNG*LLRALL Trigger: TAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTCC...AACAACAATAAGAGCCTGGATGTTCTGGATGTTGCATGTGAGAGGCGCCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCACACATGGATGCCCTCTaGCTCAGTACCTACAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PLPRKDIYCSELVTVHMPHMDAL*LSTYRA Trigger: AGCCCTGTAGGTACTGAGGCAGAGGGCATCCATGTG...TGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGTTGTGCTTATGGCCAGCTTaGTTCACATGGATGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: FDSSGSLLCPAYLLQDLLCLWPA*FTWMPS Trigger: AGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCA...CAACAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTCTGGAATGTCGTGGTCACTGGTCGAGCGCTGATTTTGGATTCAAAGGCGATTTGCCACAGTCATaGTGTCTCTTCACAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: PFLECRGHWSSADFGFKGDLPQS*CLFTAI Trigger: TATTGCTGTGAAGAGACACCATGACTGTGGCAAATC...GCCTTTGAATCCAAAATCAGCGCTCGACCAGTGACCACGACATTCCAGAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGTTGGTCAGGGGTTCTTCCTaGTATAAAGAAGAGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: FDSSGSLLCPAYLLQDLLVRGSS*YKEEPL Trigger: AAGGGGCTCTTCTTTATACCAGGAAGAACCCCTGAC...CAACAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR CAA 90 bp | TTCAGCCAGGACTCTTTAATGGTTGCCTCCTCAGGGCCTTGCTATTaGGTTACAGTGTCTTGCTGGGAACATTTGGAAATTCCATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: FSQDSLMVASSGPCY*VTVSCWEHLEIPWC Trigger: ACACCATGGAATTTCCAAATGTTCCCAGCAAGACACTGTAACCAAATAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTCCTGGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR TCA 90 bp | AGATTTGCCACAGTCATGGTGTCTCTTCACAGCAATAGAACACTGACTAAGACAATGCCCCTTAGTACCTaGGAAGCAGTGTCCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: RFATVMVSLHSNRTLTKTMPLST*EAVSQD Trigger: ATCCTGGGACACTGCTTCTCAGGTACTAAGGGGCAT...TGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTGTGGCAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGCGCCTCTCACATGCAACATCCAGAACATCCAGGCTCTTATTGTTGTTCAGAGGGAGATGAGATaGTCCTCTCTGTTTATCAGA | + |
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Preference number: 2 (lower is better) Translates to: TVAPLTCNIQNIQALIVVQREMR*SSLFIR Trigger: TCTGATAAACAGAGAGGATCATCTCATCTCCCTCTG...AACAACAATAAGAGCCTGGATGTTCTGGATGTTGCATGTGAGAGGCGCCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCACTTGGTTCACATGGATaGCCTCTGCCTCAGTACCTA | + |
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Preference number: 2 (lower is better) Translates to: PLPRKDIYCSELVTVHMPLGSHG*PLPQYL Trigger: TAGGTACTGAGGCAGAGGGCATCCATGTGAACCAAG...TGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATGGGACATGAAGGCTTTATTGGGGACTTATGGTGGAGCACAGGGGAGACACTTCTCTTGAACTTGTaGATGCTAAGACTGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PMGHEGFIGDLWWSTGETLLLNL*MLRLKA Trigger: TGCTTTCAGTCTTAGCATCCACAAGTTCAAGAGAAG...TGTCTCCCCTGTGCTCCACCATAAGTCCCCAATAAAGCCTTCATGTCCCATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTGTTGAAGCCACAGTGGCGCCTCTCACATGCAACATCCAGAACATCCAGGTGTAAGACTTGCTTGTaGTTGGTAATCTGTTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: LLLKPQWRLSHATSRTSRCKTCL*LVICSY Trigger: ATAGGAACAGATTACCAAGCACAAGCAAGTCTTACA...CCTGGATGTTCTGGATGTTGCATGTGAGAGGCGCCACTGTGGCTTCAACAACAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAAGAAGTTTACAAAACCAAACACCAGAGGGAGATGAGATGATCCTCTCTGTTTATCAGAGGCCATaGCCCTTAGTACCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PGRSLQNQTPEGDEMILSVYQRP*PLVPEK Trigger: CTTCTCAGGTACTAAGGGGCATGGCCTCTGATAAAC...AGAGAGGATCATCTCATCTCCCTCTGGTGTTTGGTTTTGTAAACTTCTTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGTGTAACAATGGCCCTCATTTTCCCACAAGATCAATTCGACTTCCTCCATAGCATCCCTAAGTTCTaGCTTCCTAAGTTAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HGVTMALIFPQDQFDFLHSIPKF*LPKLGR Trigger: TCTCCCTAACTTAGGAAGGCAGAACTTAGGGATGCT...ATGGAGGAAGTCGAATTGATCTTGTGGGAAAATGAGGGCCATTGTTACACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATGGTGTAACAATGGCCCTCATTTTCCCACAAGATCAATTCGACTTCCTGACATTCTGCTTGCTTaGATGGCACTGTCAATCAGT | + |
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Preference number: 2 (lower is better) Translates to: IPWCNNGPHFPTRSIRLPDILLA*MALSIS Trigger: ACTGATTGACAGTGCCATGCAAGCAAGCAGAATGTC...AGGAAGTCGAATTGATCTTGTGGGAAAATGAGGGCCATTGTTACACCATGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR CCA 90 bp | ATATGCCATTGCAGCAAAGTCTCTCAAGGGCTTAGAAGTAAGTCAATGGTTAGAAGACTCTTTTTGCCTTaGGACTGGCAATTCTTACCT | + |
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Preference number: 2 (lower is better) Translates to: ICHCSKVSQGLRSKSMVRRLFLP*DWQFLP Trigger: AGGTAAGAATTGCCAGTCCCAAGGCAAAAAGAGTCT...TCTAACCATTGACTTACTTCTAAGCCCTTGAGAGACTTTGCTGCAATGGCATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGTGTAACAATGGCCCTCATTTTCCCACAAGATCAATTCGACTTCCTCCATTTCTTTTATAAGATTTaGCACAGTCATGGTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HGVTMALIFPQDQFDFLHFFYKI*HSHGVS Trigger: AGAGACACCATGACTGTGGCAAATCTTATAAAAGAA...ATGGAGGAAGTCGAATTGATCTTGTGGGAAAATGAGGGCCATTGTTACACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR-3UTR GCA 90 bp | ATATGCCATTGCAGCAAAGTCTCTCAAGGGCTTAGAAGTAAGTCAATGGTTAGATTCTTTTATAAGATTTaGCACAGTCATGGTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ICHCSKVSQGLRSKSMVRFFYKI*HSHGVS Trigger: AGAGACACCATGACTGTGGCAAATCTTATAAAAGAA...TCTAACCATTGACTTACTTCTAAGCCCTTGAGAGACTTTGCTGCAATGGCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| 3UTR CCA 72 bp | GTGACAAAGGCCAGCACCTGTCCCTGGGGTCTGCCCTaGGCTTACATTCTCAGCCTGCATCCTGGAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VTKASTCPWGLP*AYILSLHPGRW Trigger: CCACCTTCCAGGATGCAGGCTGAGAATGTAAGCCCAGGGCAGACCCCAGGGACAGGTGCTGGCCTTTGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR CCA 72 bp | GAGGGCCTTCACCTGCCCCTCCCAGCACTCAGTGTGTaGTCCCATGTTCATTTGCACACCAGTGTCCCCATC | + |
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Preference number: 3 (lower is better) Translates to: EGLHLPLPALSV*SHVHLHTSVPI Trigger: GATGGGGACACTGGTGTGCAAATGAACATGGGACCACACACTGAGTGCTGGGAGGGGCAGGTGAAGGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| 3UTR CCA 72 bp | GTGTACCGGCCTACCTGTATCACCAGCAGCACTGCATaGGGCCCTGGTGAGGCCAAGAGGTCACAGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VYRPTCITSSTA*GPGEAKRSQIF Trigger: GAAGATCTGTGACCTCTTGGCCTCACCAGGGCCCCATGCAGTGCTGCTGGTGATACAGGTAGGCCGGTACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGGGGTCTGCCCTGGGCTTACATTCTCAGCCTGCATCCTGGAAGGTGGAAGGACATGAAGGCTTTATaGGGGACTTATGGTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PWGLPWAYILSLHPGRWKDMKAL*GTYGGA Trigger: TGCTCCACCATAAGTCCCCAATAAAGCCTTCATGTC...CTTCCACCTTCCAGGATGCAGGCTGAGAATGTAAGCCCAGGGCAGACCCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | CTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTaGCTCAGTACCTACAGGGCTTCTCAGAGGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LLMASLVHMDAL*LSTYRASQRPS Trigger: AGATGGCCTCTGAGAAGCCCTGTAGGTACTGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | GACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATaGCCTCTGCCTCAGTACCTACAGGGCTTCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DTPAYGQLGSHG*PLPQYLQGFSE Trigger: CTCTGAGAAGCCCTGTAGGTACTGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR CCA 72 bp | TGGAGCACAGGGGAGACAGCACACAGGGGATGGCTCTaGGTTGGCTCTCTCATATTTGACTCCTCAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: WSTGETAHRGWL*VGSLIFDSSGS Trigger: AGATCCTGAGGAGTCAAATATGAGAGAGCCAACCCAGAGCCATCCCCTGTGTGCTGTCTCCCCTGTGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | GTCCCTGGGGTCTGCCCTGGGCTTACATTCTCAGCCTaGATCCTGGAAGGTGGAAGTGAACATTCTTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: VPGVCPGLTFSA*ILEGGSEHSYQ Trigger: TTGGTAAGAATGTTCACTTCCACCTTCCAGGATGCAGGCTGAGAATGTAAGCCCAGGGCAGACCCCAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR CCA 72 bp | TTATGGTGGAGCACAGGGGAGACAGCACACAGGGGATaGCTCTGGGTTGGCTCTCTCATATTTGACTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LWWSTGETAHRG*LWVGSLIFDSS Trigger: TGAGGAGTCAAATATGAGAGAGCCAACCCAGAGCCATCCCCTGTGTGCTGTCTCCCCTGTGCTCCACCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR CCA 72 bp | GGGTCTGCCCTGGGCTTACATTCTCAGCCTGCATCCTaGAAGGTGGAAGTGAACATTCTTACCAAGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: GSALGLHSQPAS*KVEVNILTKGT Trigger: TGTCCCCTTGGTAAGAATGTTCACTTCCACCTTCCAGGATGCAGGCTGAGAATGTAAGCCCAGGGCAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | ACACAGGGGATGGCTCTGGGTTGGCTCTCTCATATTTaGCTCCTCAGGATCTCTGCTGTGTCCTGCCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: TQGMALGWLSHI*LLRISAVSCLS Trigger: AGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAATATGAGAGAGCCAACCCAGAGCCATCCCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | GCTTACATTCTCAGCCTGCATCCTGGAAGGTGGAAGTaGACATTCTTACCAAGGGGACATCAGAGCCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: AYILSLHPGRWK*TFLPRGHQSHR Trigger: CCGGTGGCTCTGATGTCCCCTTGGTAAGAATGTTCACTTCCACCTTCCAGGATGCAGGCTGAGAATGTAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | CCTCTCTGTTTATCAGAGGCCATGCCCCTTAGTACCTaGGAAGCAGTGTCCCAGGATGAGGACAGCAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLCLSEAMPLST*EAVSQDEDSSS Trigger: ACTACTGCTGTCCTCATCCTGGGACACTGCTTCTCAGGTACTAAGGGGCATGGCCTCTGATAAACAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | TCCCTTTCTGGAATGTCGTGGTCACTGGTCGAGCGCTaGTTTTGGATTCAAAGGCTTGCCTGCCAAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSGMSWSLVER*FWIQRLACQGC Trigger: GCATCCTTGGCAGGCAAGCCTTTGAATCCAAAATCAGCGCTCGACCAGTGACCACGACATTCCAGAAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | GAACATTCTTACCAAGGGGACATCAGAGCCACCGGCTaGGAAGGAAGACTCAGATGTCAACCAAACTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EHSYQGDIRATG*EGRLRCQPNSG Trigger: CCCAGAGTTTGGTTGACATCTGAGTCTTCCTTCTCAGCCGGTGGCTCTGATGTCCCCTTGGTAAGAATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | CCCTCCCAGCACTCAGTGTGTGGTCCCATGTTCATTTaGACACCAGTGTCCCCATCTACATTTTCCCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: PSQHSVCGPMFI*TPVSPSTFSLI Trigger: AATCAGGGAAAATGTAGATGGGGACACTGGTGTGCAAATGAACATGGGACCACACACTGAGTGCTGGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | CTGGGACAGCCTTTTCAGCCAGGACTCTTTAATGGTTaGCTCCTCAGGGCCTTGCTATTTGGTTACAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGQPFQPGLFNG*LLRALLFGYSV Trigger: GACACTGTAACCAAATAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTCCTGGCTGAAAAGGCTGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGGGACATGAAGGCTTTATTGGGGACTTATGGTGGAGCACAGGGGAGACAAAGACTCTTTTTGCCTaGGGACTGGCAATTCTTACC | + |
|
Preference number: 3 (lower is better) Translates to: PMGHEGFIGDLWWSTGETKTLFA*GLAILT Trigger: GGTAAGAATTGCCAGTCCCAAGGCAAAAAGAGTCTT...TGTCTCCCCTGTGCTCCACCATAAGTCCCCAATAAAGCCTTCATGTCCCATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGTTGGGACATTCTGCTTGCTaGCATGGCACTGTCAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: FDSSGSLLCPAYLLQDLLGHSAC*HGTVNQ Trigger: CTGATTGACAGTGCCATGCAAGCAAGCAGAATGTCC...CAACAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | ATGATAGTTTTCCAAGTGTGGTCCCCAGGGAGAGACTaGTGGCTCTCAGATTACAGAGCACCAACACTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: MIVFQVWSPGRD*WLSDYRAPTLE Trigger: TTCGAGTGTTGGTGCTCTGTAATCTGAGAGCCATCAGTCTCTCCCTGGGGACCACACTTGGAAAACTATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | AGCCAGGACTCTTTAATGGTTGCCTCCTCAGGGCCTTaGTATTTGGTTACAGTGTCTTGCTGGGAACATTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQDSLMVASSGP*YLVTVSCWEHL Trigger: CAAATGTTCCCAGCAAGACACTGTAACCAAATAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTCCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR CCA 72 bp | AAACTCTCTAGTCCCTTTCTGGAATGTCGTGGTCACTaGTCGAGCGCTGATTTTGGATTCAAAGGCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KLSSPFLECRGH*SSADFGFKGLP Trigger: AGGCAAGCCTTTGAATCCAAAATCAGCGCTCGACCAGTGACCACGACATTCCAGAAAGGGACTAGAGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | GCATCAGATTCAGCTAATCACCCACACAGGGACTACTaGCTTCCAGAGTTTCGAGTCAAAGCAAGTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: ASDSANHPHRDY*LPEFRVKASLI Trigger: GATGAGACTTGCTTTGACTCGAAACTCTGGAAGTCAGTAGTCCCTGTGTGGGTGATTAGCTGAATCTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGACTGTACATATGCCATaGCAGCAAAGTCTCTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IFDSSGSLLCPAYLLQDLTVHMP*QQSLSR Trigger: CCTTGAGAGACTTTGCTGCAATGGCATATGTACAGT...CAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTTGGTCCCATGTTCATTaGCACACCAGTGTCCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: PPQERHILFRISHCTYAIWSHVH*HTSVPI Trigger: GATGGGGACACTGGTGTGCAAATGAACATGGGACCA...AATGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | CTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGTTaGCTCTGTTGTAAGACTTGCTTGTGCTTGGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: LCCVLPICCKTC*LCCKTCLCLVI Trigger: GATTACCAAGCACAAGCAAGTCTTACAACAGAGTCAACAAGTCTTGCAACAGATAGGCAGGACACAGCAGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR CCA 72 bp | TCCTCAGGGCCTTGCTATTTGGTTACAGTGTCTTGCTaGGAACATTTGGAAATTCCATGGTGTAACAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSGPCYLVTVSC*EHLEIPWCNNG Trigger: GCCATTGTTACACCATGGAATTTCCAAATGTTCCCAGCAAGACACTGTAACCAAATAGCAAGGCCCTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGTAACAATGGCCCTCATTTTCCCACAAGATCAATTCGACTTCCTCCATACTGTACATATGCCATaGCAGCAAAGTCTCTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HGVTMALIFPQDQFDFLHTVHMP*QQSLSR Trigger: CCTTGAGAGACTTTGCTGCAATGGCATATGTACAGT...ATGGAGGAAGTCGAATTGATCTTGTGGGAAAATGAGGGCCATTGTTACACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR TCA 72 bp | CCAAGATTTTTACTCCTGCATACCTGCACTCTAAGCTaGCCTGAAGTCTTCATGGCTTTCTTGAGCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PRFLLLHTCTLS*PEVFMAFLSFS Trigger: GGAAAAGCTCAAGAAAGCCATGAAGACTTCAGGTCAGCTTAGAGTGCAGGTATGCAGGAGTAAAAATCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | CAACTCTACTTAGCTCACAAAAGATGGTACTACTCCTaGCCCTCCCCAGGAAAGACATATACTGTTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QLYLAHKRWYYS*PSPGKTYTVQN Trigger: ATTCTGAACAGTATATGTCTTTCCTGGGGAGGGGCAGGAGTAGTACCATCTTTTGTGAGCTAAGTAGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR GCA 72 bp | TTTCGAGTCAAAGCAAGTCTCATCATGTGTATGATCTaGATGTCTTTCTCAAGGAGGAGCTTAGGTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FRVKASLIMCMI*MSFSRRSLGVK Trigger: CTTCACACCTAAGCTCCTCCTTGAGAAAGACATGCAGATCATACACATGATGAGACTTGCTTTGACTCGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCATGGTGTAACAATGGCCCTCATTTTCCCACAAGATCAATTCGACTTCCTTGTTGTAAGACTTGCTaGTGCTTGGTAATCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IPWCNNGPHFPTRSIRLPCCKTC*CLVICS Trigger: GGAACAGATTACCAAGCACAAGCAAGTCTTACAACA...AGGAAGTCGAATTGATCTTGTGGGAAAATGAGGGCCATTGTTACACCATGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| 3UTR CCA 72 bp | CTTGCTATTTGGTTACAGTGTCTTGCTGGGAACATTTaGAAATTCCATGGTGTAACAATGGCCCTCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LAIWLQCLAGNI*KFHGVTMALIF Trigger: GAAAATGAGGGCCATTGTTACACCATGGAATTTCCAAATGTTCCCAGCAAGACACTGTAACCAAATAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| CDS-3UTR GCA 90 bp | GGGACTTATGGTGGAGCACAGGGGAGACAGCACACAGGGGATGGCTCTGGGTTGCCCACCAGAAGGAGCTaGAGTCTCTTTGGGGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTYGGAQGRQHTGDGSGLPTRRS*SLFGVS Trigger: ACTCACCCCAAAGAGACTGCAGCTCCTTCTGGTGGG...CAACCCAGAGCCATCCCCTGTGTGCTGTCTCCCCTGTGCTCCACCATAAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
||
| CDS-3UTR GCA 90 bp | GGGACTTATGGTGGAGCACAGGGGAGACAGCACACAGGGGATGGCTCTGGGTTGGTGGCGCCTCTCACATaGAACATCCAGAACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTYGGAQGRQHTGDGSGLVAPLT*NIQNIQ Trigger: CTGGATGTTCTGGATGTTGCATGTGAGAGGCGCCAC...CAACCCAGAGCCATCCCCTGTGTGCTGTCTCCCCTGTGCTCCACCATAAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
||
| CDS-3UTR GCA 90 bp | CCCTGGGGTCTGCCCTGGGCTTACATTCTCAGCCTGCATCCTGGAAGGTGGAAGTTCTTCTCAGGTCTGTaGTCACACTCTTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PWGLPWAYILSLHPGRWKFFSGL*SHSSSS Trigger: GGAAGAGGAAGAGTGTGAGCACAGACCTGAGAAGAA...CTTCCACCTTCCAGGATGCAGGCTGAGAATGTAAGCCCAGGGCAGACCCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| CDS-3UTR TCA 90 bp | AGAACACTGACTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCACCACTGGGCTGGCTaGCAGGCAAGAAGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLTKTLLLMASLVHMDAHHWAG*QARRSL Trigger: CAGAGACCTTCTTGCCTGTCAGCCAGCCCAGTGGTG...GGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAGTCAGTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATCTGAATCTGGGACAGCCTTTTCAGCCAGGACTCTTTAATGGTTGCCTCGAGTCCAGGGGCCACTaGCTTGTGGGATTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHLNLGQPFQPGLFNGCLESRGH*LVGFFS Trigger: TGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTC...GAGGCAACCATTAAAGAGTCCTGGCTGAAAAGGCTGTCCCAGATTCAGATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| CDS-3UTR TCA 90 bp | GGGACTTATGGTGGAGCACAGGGGAGACAGCACACAGGGGATGGCTCTGGGTTGGATTCTCTGAAAGAATaGATAGAATGGCCAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTYGGAQGRQHTGDGSGLDSLKE*IEWPGK Trigger: TTTCCCTGGCCATTCTATTCATTCTTTCAGAGAATC...CAACCCAGAGCCATCCCCTGTGTGCTGTCTCCCCTGTGCTCCACCATAAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| CDS-3UTR GCA 90 bp | CTGACTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTGCATTCAAAGGCTTGCCTaGCAAGGATGCTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTKTLLLMASLVHMDALCIQRLA*QGCCSL Trigger: CAGGGAACAGCATCCTTGGCAGGCAAGCCTTTGAAT...GCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
||
| CDS-3UTR CCA 90 bp | TTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGTTGCTTCCACCACTGGGCTaGCTGACAGGCAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FDSSGSLLCPAYLLQDLLLPPLG*LTGKKV Trigger: GACCTTCTTGCCTGTCAGCCAGCCCAGTGGTGGAAG...CAACAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| CDS-3UTR TCA 90 bp | CTGAATCTGGGACAGCCTTTTCAGCCAGGACTCTTTAATGGTTGCCTCCTCAGGAGCACTGGTCTCTGGTaGATTTTCTGGCTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLGQPFQPGLFNGCLLRSTGLW*IFWLSW Trigger: CCAGGAAAGCCAGAAAATTCACCAGAGACCAGTGCT...CCTGAGGAGGCAACCATTAAAGAGTCCTGGCTGAAAAGGCTGTCCCAGATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR CAA 72 bp | AGAACACTGACTAAGACACTCCTGCTTATGGCCAGCTaGGTTCACATGGATGCCCTCTGCCTCAGTACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTLTKTLLLMAS*VHMDALCLSTY Trigger: GTAGGTACTGAGGCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAGTCAGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
||
| 3UTR CAA 72 bp | TCAAGGAGGAGCTTAGGTGTGAAGACTCTTTTTGCCTaGGGACTGGCAATTCTTACCTCCCAGGGCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRSLGVKTLFA*GLAILTSQGHH Trigger: GTGATGGCCCTGGGAGGTAAGAATTGCCAGTCCCAAGGCAAAAAGAGTCTTCACACCTAAGCTCCTCCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| CDS-3UTR TCA 90 bp | CCAATGGGACATGAAGGCTTTATTGGGGACTTATGGTGGAGCACAGGGGAGACAAGGCTGGTTCTGAGGTaGAAAAATATCTGGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PMGHEGFIGDLWWSTGETRLVLR*KNIWGV Trigger: GACACCCCAGATATTTTTTCACCTCAGAACCAGCCT...TGTCTCCCCTGTGCTCCACCATAAGTCCCCAATAAAGCCTTCATGTCCCATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
||
| CDS-3UTR TCA 90 bp | AGATTTGCCACAGTCATGGTGTCTCTTCACAGCAATAGAACACTGACTAAGACATGCATGGGGCCCTGGTaGGGCCAAGAGGTCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFATVMVSLHSNRTLTKTCMGPW*GQEVTD Trigger: ATCTGTGACCTCTTGGCCTCACCAGGGCCCCATGCA...TGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTGTGGCAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAGAAGTTTACAAAACCAAACACCAGAGGGAGATGAGATGATCCTCTCTCTTCCACCACTGGGCTaGCTGACAGGCAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRSLQNQTPEGDEMILSLPPLG*LTGKKV Trigger: GACCTTCTTGCCTGTCAGCCAGCCCAGTGGTGGAAG...AGAGAGGATCATCTCATCTCCCTCTGGTGTTTGGTTTTGTAAACTTCTTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTACCAGCAGCACTGCATaGGGCCCTGGTGAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQERHILFRISHCTYAITSSTA*GPGEAK Trigger: CTTGGCCTCACCAGGGCCCCATGCAGTGCTGCTGGT...AATGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTTCCAAAGATCTCCTaGAGGCACCTGGCTACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPRKDIYCSELVTVHMPFPKIS*RHLATA Trigger: GGCGGTAGCCAGGTGCCTCCAGGAGATCTTTGGAAA...TGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
||
| 3UTR CAA 72 bp | CAGCCAGGACTCTTTAATGGTTGCCTCCTCAGGGCCTaGCTATTTGGTTACAGTGTCTTGCTGGGAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: QPGLFNGCLLRA*LFGYSVLLGTF Trigger: AAATGTTCCCAGCAAGACACTGTAACCAAATAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTCCTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTGAGTCCAGGGGCCACTaGCTTGTGGGATTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPQERHILFRISHCTYAIESRGH*LVGFFS Trigger: TGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTC...AATGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCAGATGCTGTTCCCTGTTaGACTTTTCCCGCTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PLPRKDIYCSELVTVHMPDAVPC*TFPASC Trigger: ACAGGAAGCGGGAAAAGTGCAACAGGGAACAGCATC...TGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| 3UTR CAA 72 bp | GACATTCTGCTTGCTTGCATGGCACTGTCAATCAGTTaGATGCATCAGATTCAGCTAATCACCCACACAGGG | + |
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Preference number: 4 (lower is better) Translates to: DILLACMALSIS*MHQIQLITHTG Trigger: CCCTGTGTGGGTGATTAGCTGAATCTGATGCATCAAACTGATTGACAGTGCCATGCAAGCAAGCAGAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTCTTCTCAGGTCTGTaGTCACACTCTTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PLPRKDIYCSELVTVHMPFFSGL*SHSSSS Trigger: GGAAGAGGAAGAGTGTGAGCACAGACCTGAGAAGAA...TGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTAGCACTGGTCTCTGGTaGATTTTCTGGCTTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PPQERHILFRISHCTYAISTGLW*IFWLSW Trigger: CCAGGAAAGCCAGAAAATTCACCAGAGACCAGTGCT...AATGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| CDS-3UTR GCA 90 bp | CCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTCTGCTCATCCCCTTGTaGCTTGTTGTTGAAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PPQERHILFRISHCTYAILLIPL*LVVEAT Trigger: TGTGGCTTCAACAACAAGGCACAAGGGGATGAGCAG...AATGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| 3UTR CAA 72 bp | GACTCTTTAATGGTTGCCTCCTCAGGGCCTTGCTATTaGGTTACAGTGTCTTGCTGGGAACATTTGGAAATT | + |
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Preference number: 4 (lower is better) Translates to: DSLMVASSGPCY*VTVSCWEHLEI Trigger: AATTTCCAAATGTTCCCAGCAAGACACTGTAACCAAATAGCAAGGCCCTGAGGAGGCAACCATTAAAGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| CDS-3UTR TCA 90 bp | ATATTTGACTCCTCAGGATCTCTGCTGTGTCCTGCCTATCTGTTGCAAGACTTGGATTCTCTGAAAGAATaGATAGAATGGCCAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: IFDSSGSLLCPAYLLQDLDSLKE*IEWPGK Trigger: TTTCCCTGGCCATTCTATTCATTCTTTCAGAGAATC...CAAGTCTTGCAACAGATAGGCAGGACACAGCAGAGATCCTGAGGAGTCAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| CDS-3UTR GCA 90 bp | CCTCCCCAGGAAAGACATATACTGTTCAGAATTAGTCACTGTACATATGCCATTTTGGATTCAAAGGCTTaGCTGCCAAGGATGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: PPQERHILFRISHCTYAILDSKA*LPRMLF Trigger: GAACAGCATCCTTGGCAGGCAAGCCTTTGAATCCAA...AATGGCATATGTACAGTGACTAATTCTGAACAGTATATGTCTTTCCTGGGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS-3UTR CCA 90 bp | ATATGCCATTGCAGCAAAGTCTCTCAAGGGCTTAGAAGTAAGTCAATGGTTAGATCTCTAGTCCCTTTCTaGAATGTCGTGGTCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ICHCSKVSQGLRSKSMVRSLVPF*NVVVTG Trigger: ACCAGTGACCACGACATTCCAGAAAGGGACTAGAGA...TCTAACCATTGACTTACTTCTAAGCCCTTGAGAGACTTTGCTGCAATGGCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS-3UTR CCA 90 bp | TTTGCCACAGTCATGGTGTCTCTTCACAGCAATAGAACACTGACTAAGACACTCCATTTGGAAATTCCATaGTGTAACAATGGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FATVMVSLHSNRTLTKTLHLEIP*CNNGPH Trigger: ATGAGGGCCATTGTTACACCATGGAATTTCCAAATG...GAGTGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTGTGGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS-3UTR CCA 90 bp | TTTGCCACAGTCATGGTGTCTCTTCACAGCAATAGAACACTGACTAAGACACTCCTTGCTGGGAACATTTaGAAATTCCATGGTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: FATVMVSLHSNRTLTKTLLAGNI*KFHGVT Trigger: TGTTACACCATGGAATTTCCAAATGTTCCCAGCAAG...GAGTGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTGTGGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| 3UTR CAA 72 bp | CCTTGCTATTTGGTTACAGTGTCTTGCTGGGAACATTaGGAAATTCCATGGTGTAACAATGGCCCTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: PCYLVTVSCWEH*EIPWCNNGPHF Trigger: AAAATGAGGGCCATTGTTACACCATGGAATTTCCAAATGTTCCCAGCAAGACACTGTAACCAAATAGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| CDS-3UTR CAA 90 bp | CCCTTTCTGGAATGTCGTGGTCACTGGTCGAGCGCTGATTTTGGATTCAAAGGCCCAGGGGCCACTGCCTaGTGGGATTCTTCTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: PFLECRGHWSSADFGFKGPGATA*WDSSQV Trigger: GACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGG...GCCTTTGAATCCAAAATCAGCGCTCGACCAGTGACCACGACATTCCAGAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| CDS CCA 90 bp | GACCTTTTGTCAATCCTTGTCCAGAGTCCAGGGGCCACTGCCTTGTaGGATTCTTCTCAGGTCTGTGCTCACACTCTTCCTCTTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: DLLSILVQSPGATAL*DSSQVCAHTLPLPP Trigger: TGGTGGAAGAGGAAGAGTGTGAGCACAGACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTCTGGACAAGGATTGACAAAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS CCA 90 bp | GCACTTTTGTCAATCCTTGTCCAGAGTCCAGGGGCCACTGCCTTGTaGGATTCTTCTCAGGTCTGTGCTCACACTCTTCCTCTTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: ALLSILVQSPGATAL*DSSQVCAHTLPLPP Trigger: TGGTGGAAGAGGAAGAGTGTGAGCACAGACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTCTGGACAAGGATTGACAAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126422.3 |
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| CDS-3UTR CAA 90 bp | CTGACTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTGCACCTTTTGTCAATCCTaGTCCAGAGTCCAGGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LTKTLLLMASLVHMDALCTFCQS*SRVQGP Trigger: TGGCCCCTGGACTCTGGACAAGGATTGACAAAAGGT...GCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| CDS-3UTR CAA 90 bp | GGGACTTATGGTGGAGCACAGGGGAGACAGCACACAGGGGATGGCTCTGGGTTGTCTTGCTGGGAACATTaGGAAATTCCATGGTGTAAC | + |
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Preference number: 5 (lower is better) Translates to: GTYGGAQGRQHTGDGSGLSCWEH*EIPWCN Trigger: GTTACACCATGGAATTTCCAAATGTTCCCAGCAAGA...CAACCCAGAGCCATCCCCTGTGTGCTGTCTCCCCTGTGCTCCACCATAAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS CCA 90 bp | TACCTTTTGTCAATCCTTGTCCAGAGTCCAGGGGCCACTGCCTTGTaGGATTCTTCTCAGGTCTGTGCTCACACTCTTCCTCTTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: YLLSILVQSPGATAL*DSSQVCAHTLPLPP Trigger: TGGTGGAAGAGGAAGAGTGTGAGCACAGACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTCTGGACAAGGATTGACAAAAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| CDS-3UTR CAA 90 bp | CTGACTAAGACACTCCTGCTTATGGCCAGCTTGGTTCACATGGATGCCCTCTGCTTTGGATTCAAAGGCTaGCCTGCCAAGGATGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: LTKTLLLMASLVHMDALCFGFKG*PAKDAV Trigger: AACAGCATCCTTGGCAGGCAAGCCTTTGAATCCAAA...GCAGAGGGCATCCATGTGAACCAAGCTGGCCATAAGCAGGAGTGTCTTAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS-3UTR CAA 90 bp | AGATTTGCCACAGTCATGGTGTCTCTTCACAGCAATAGAACACTGACTAAGACACCAGGGGCCACTGCCTaGTGGGATTCTTCTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: RFATVMVSLHSNRTLTKTPGATA*WDSSQV Trigger: GACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGG...TGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTGTGGCAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCACAGTCATGGTGTCTCTTCACAGCAATAGAACACTGACTAAGACACTCCCTTGTGCCTTGTTGTaGAAGCCACAGTGGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: FATVMVSLHSNRTLTKTLPCALL*KPQWRL Trigger: GAGGCGCCACTGTGGCTTCAACAACAAGGCACAAGG...GAGTGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTGTGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS-3UTR CAA 90 bp | TTTGCCACAGTCATGGTGTCTCTTCACAGCAATAGAACACTGACTAAGACACTCTCCCCTTGTGCCTTGTaGTTGAAGCCACAGTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: FATVMVSLHSNRTLTKTLSPCAL*LKPQWR Trigger: GCGCCACTGTGGCTTCAACAACAAGGCACAAGGGGA...GAGTGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTGTGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053661.7 |
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| CDS-3UTR CAA 90 bp | AGAAGTTTACAAAACCAAACACCAGAGGGAGATGAGATGATCCTCTCTGTTTATACCTTTTGTCAATCCTaGTCCAGAGTCCAGGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RSLQNQTPEGDEMILSVYTFCQS*SRVQGP Trigger: TGGCCCCTGGACTCTGGACAAGGATTGACAAAAGGT...ATAAACAGAGAGGATCATCTCATCTCCCTCTGGTGTTTGGTTTTGTAAACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119315.2 |
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| CDS TCA 72 bp | GTGCTCACACTCTTCCTCTTCCACCACTGGGCTGGCTaGCAGGCAAGAAGGTCTCTGTTCCCCGACTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: VLTLFLFHHWAG*QARRSLFPDFS Trigger: ACTGAAGTCGGGGAACAGAGACCTTCTTGCCTGTCAGCCAGCCCAGTGGTGGAAGAGGAAGAGTGTGAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 ENSMUST00000126422.3 |
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| CDS GCA 72 bp | CCTTTTGTCAATCCTTGTCCAGAGTCCAGGGGCCACTaGCTTGTGGGATTCTTCTCAGGTCTGTGCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: PFVNPCPESRGH*LVGFFSGLCSH Trigger: GTGTGAGCACAGACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTCTGGACAAGGATTGACAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 |
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| CDS CCA 72 bp | TCAATCCTTGTCCAGAGTCCAGGGGCCACTGCCTTGTaGGATTCTTCTCAGGTCTGTGCTCACACTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SILVQSPGATAL*DSSQVCAHTLP Trigger: AGGAAGAGTGTGAGCACAGACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTCTGGACAAGGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 ENSMUST00000126422.3 |
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| CDS GCA 72 bp | ACTTTTGTCAATCCTTGTCCAGAGTCCAGGGGCCACTaGCTTGTGGGATTCTTCTCAGGTCTGTGCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: TFVNPCPESRGH*LVGFFSGLCSH Trigger: GTGTGAGCACAGACCTGAGAAGAATCCCACAAGGCAGTGGCCCCTGGACTCTGGACAAGGATTGACAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126422.3 |
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| CDS TCA 72 bp | TCCTGGTGGGGTCGAAATGTAGATTCTCTGAAAGAATaGATAGAATGGCCAGGGAAAAGTTTCTATAGAACA | + |
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Preference number: 6 (lower is better) Translates to: SWWGRNVDSLKE*IEWPGKSFYRT Trigger: TGTTCTATAGAAACTTTTCCCTGGCCATTCTATTCATTCTTTCAGAGAATCTACATTTCGACCCCACCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053661.7 ENSMUST00000119315.2 ENSMUST00000126422.3 |
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