Pregenerated sensors for GIMAP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043505Ensembl transcript IDs: ENSMUST00000055558.6
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATCTCTGACCATAGACTTTCTGGCTCATGTGATTCTTGACTGCTaGCCCTGCTTTTTCTGGGATAAGACCTACCCTGCTCCTGTAACC | + |
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Preference number: 1 (lower is better) Translates to: VSLTIDFLAHVILDC*PCFFWDKTYPAPVT Trigger: GGTTACAGGAGCAGGGTAGGTCTTATCCCAGAAAAAGCAGGGTCAGCAGTCAAGAATCACATGAGCCAGAAAGTCTATGGTCAGAGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR TCA 90 bp | CCTGGCATGTCTGATCCATGGGAATCAAATGAGAGTGAAATTAATTaGAGACTGAGGTTCCCTGACATGAGATGGGGAACTTTGGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: PGMSDPWESNESEIN*RLRFPDMRWGTLGD Trigger: GTCCCCCAAAGTTCCCCATCTCATGTCAGGGAACCTCAGTCTTCAATTAATTTCACTCTCATTTGATTCCCATGGATCAGACATGCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR CCA 90 bp | TATAATGCTCACCACACAATCTTCCAAGCCCAAGATACACACCTCTaGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCATGTGATT | + |
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Preference number: 1 (lower is better) Translates to: YNAHHTIFQAQDTHL*PFVSLTIDFLAHVI Trigger: AATCACATGAGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGCTTGGAAGATTGTGTGGTGAGCATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR GCA 90 bp | TTCAAAAACTTAGTGCTCATCAGGTTTATGTATCATAGTGGCTTTTaGCTGCATGAGTTGTTGAGGGCCTATAATGCTCACCACACAATC | + |
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Preference number: 1 (lower is better) Translates to: FKNLVLIRFMYHSGF*LHELLRAYNAHHTI Trigger: GATTGTGTGGTGAGCATTATAGGCCCTCAACAACTCATGCAGGCAAAAGCCACTATGATACATAAACCTGATGAGCACTAAGTTTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR TCA 90 bp | GACTTTATTGGTACCATGAAAGTCAGGGTATACTTGACTAAAGTATaGCTCTGCTCTCAGCTTTGTGTATTTCTCCTCTTGACATCACAT | + |
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Preference number: 1 (lower is better) Translates to: DFIGTMKVRVYLTKV*LCSQLCVFLLLTSH Trigger: ATGTGATGTCAAGAGGAGAAATACACAAAGCTGAGAGCAGAGTCATACTTTAGTCAAGTATACCCTGACTTTCATGGTACCAATAAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCACTCATGTCCTGGCCCTCCCACCTCAGTGCTTCATGCACACCATCTTTATTTTGGGGGACAAGGATaGTGGAAGAAATCACCCAAA | + |
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Preference number: 2 (lower is better) Translates to: PHSCPGPPTSVLHAHHLYFGGQG*WKKSPK Trigger: TTTGGGTGATTTCTTCCATCATCCTTGTCCCCCAAA...ATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACATGAGTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTCATGTCCTGGCCCTCCCACCTCAGTGCTTCATGCACACCATCTTTATGGCATGTCTGATCCATaGGAATCAAATGAGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PHSCPGPPTSVLHAHHLYGMSDP*ESNESE Trigger: TTCACTCTCATTTGATTCCCATGGATCAGACATGCC...ATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACATGAGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCACCTCAGTGCTTCATaGACACCATCTTTATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: AQDTHLWPFVSLTIDFLAHLSAS*TPSLSF Trigger: GAAAGATAAAGATGGTGTGCATGAAGCACTGAGGTG...AGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGTGCAAGCCCCCAGACCTTTATAATGGTAGCTACTTGCTTCATCATCTAAAGACTGAGGTTCCCTaGCATGAGATGGGGAACTTT | + |
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Preference number: 2 (lower is better) Translates to: PLCKPPDLYNGSYLLHHLKTEVP*HEMGNF Trigger: AAAGTTCCCCATCTCATGTCAGGGAACCTCAGTCTT...TAGATGATGAAGCAAGTAGCTACCATTATAAAGGTCTGGGGGCTTGCACAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCATGTGTCTTCCTTTGTGCAAGCCCCCAGACCTTTATAATGGTAGCTACGAGAGTGAAATTAATTaGAGACTGAGGTTCCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: QSMCLPLCKPPDLYNGSYESEIN*RLRFPD Trigger: GTCAGGGAACCTCAGTCTTCAATTAATTTCACTCTC...GTAGCTACCATTATAAAGGTCTGGGGGCTTGCACAAAGGAAGACACATGGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAGACCTTTATAATGGTAGCTACTTGCTTCATCATCTATCCTCACAACTTTTCCCTGACATGAGATaGGGAACTTTGGGGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PPDLYNGSYLLHHLSSQLFPDMR*GTLGDK Trigger: CTTGTCCCCCAAAGTTCCCCATCTCATGTCAGGGAA...AAGTTGTGAGGATAGATGATGAAGCAAGTAGCTACCATTATAAAGGTCTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR TCA 90 bp | ACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCATGTGATTTACTTGACTAAAGTATaGCTCTGCTCTCAGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: THLWPFVSLTIDFLAHVIYLTKV*LCSQLC Trigger: ACAAAGCTGAGAGCAGAGTCATACTTTAGTCAAGTA...AATCACATGAGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR TCA 90 bp | ACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCATGTGATTAAGTCAGGGTATACTTaGCTAAAGTATGACTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: THLWPFVSLTIDFLAHVIKSGYT*LKYDSA Trigger: AGCAGAGTCATACTTTAGTCAAGTATACCCTGACTT...AATCACATGAGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCATTTATCTTTCTCGGGGTaGAATTATGATGGAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QDTHLWPFVSLTIDFLAHLSFSG*NYDGVL Trigger: CAGAACTCCATCATAATTCCACCCCGAGAAAGATAA...ATGAGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR GCA 72 bp | TTGGTCCCCACTCATGTCCTGGCCCTCCCACCTCAGTaGTTCATGCACACCATCTTTATCTTTCTCGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: LVPTHVLALPPQ*FMHTIFIFLGV Trigger: CACCCCGAGAAAGATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACATGAGTGGGGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR-3UTR CAA 90 bp | GATAAGACCTACCCTGCTCCTGTAACCTCTTCACTTGGTCCCCACTCATGTCCTATGAGATGGGGAACTTaGGGGGACAAGGATGATGGA | + |
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Preference number: 3 (lower is better) Translates to: DKTYPAPVTSSLGPHSCPMRWGT*GDKDDG Trigger: TCCATCATCCTTGTCCCCCAAAGTTCCCCATCTCAT...AGGACATGAGTGGGGACCAAGTGAAGAGGTTACAGGAGCAGGGTAGGTCTTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR GCA 72 bp | CCACTCATGTCCTGGCCCTCCCACCTCAGTGCTTCATaGACACCATCTTTATCTTTCTCGGGGTGGAATTAT | + |
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Preference number: 3 (lower is better) Translates to: PLMSWPSHLSAS*TPSLSFSGWNY Trigger: ATAATTCCACCCCGAGAAAGATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACATGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR GCA 72 bp | CACCCACTGCCACAACAGTCCATGTGTCTTCCTTTGTaGAAGCCCCCAGACCTTTATAATGGTAGCTACTTG | + |
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Preference number: 3 (lower is better) Translates to: HPLPQQSMCLPL*KPPDLYNGSYL Trigger: CAAGTAGCTACCATTATAAAGGTCTGGGGGCTTGCACAAAGGAAGACACATGGACTGTTGTGGCAGTGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR CCA 72 bp | CACCACACAATCTTCCAAGCCCAAGATACACACCTCTaGCCCTTTGTATCTCTGACCATAGACTTTCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: HHTIFQAQDTHL*PFVSLTIDFLA Trigger: AGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGCTTGGAAGATTGTGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR TCA 72 bp | ACCATAGACTTTCTGGCTCATGTGATTCTTGACTGCTaGCCCTGCTTTTTCTGGGATAAGACCTACCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: TIDFLAHVILDC*PCFFWDKTYPA Trigger: AGCAGGGTAGGTCTTATCCCAGAAAAAGCAGGGTCAGCAGTCAAGAATCACATGAGCCAGAAAGTCTATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR TCA 72 bp | TTATGTATCATAGTGGCTTTTGCCTGCATGAGTTGTTaGGGGCCTATAATGCTCACCACACAATCTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LCIIVAFACMSC*GPIMLTTQSSK Trigger: CTTGGAAGATTGTGTGGTGAGCATTATAGGCCCTCAACAACTCATGCAGGCAAAAGCCACTATGATACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR GCA 72 bp | TGTGCAAGCCCCCAGACCTTTATAATGGTAGCTACTTaGTTCATCATCTATCCTCACAACTTCAACAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: CASPQTFIMVAT*FIIYPHNFNKE Trigger: CTCTTTGTTGAAGTTGTGAGGATAGATGATGAAGCAAGTAGCTACCATTATAAAGGTCTGGGGGCTTGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR GCA 72 bp | TTAGTGCTCATCAGGTTTATGTATCATAGTGGCTTTTaGCTGCATGAGTTGTTGAGGGCCTATAATGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LVLIRFMYHSGF*LHELLRAYNAH Trigger: GTGAGCATTATAGGCCCTCAACAACTCATGCAGGCAAAAGCCACTATGATACATAAACCTGATGAGCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR TCA 72 bp | GGTACCATGAAAGTCAGGGTATACTTGACTAAAGTATaGCTCTGCTCTCAGCTTTGTGTATTTCTCCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: GTMKVRVYLTKV*LCSQLCVFLLL Trigger: CAAGAGGAGAAATACACAAAGCTGAGAGCAGAGTCATACTTTAGTCAAGTATACCCTGACTTTCATGGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR CCA 72 bp | AGTGCTTCATGCACACCATCTTTATCTTTCTCGGGGTaGAATTATGATGGAGTTCTGACTTTATTGGTACCA | + |
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Preference number: 3 (lower is better) Translates to: SASCTPSLSFSG*NYDGVLTLLVP Trigger: TGGTACCAATAAAGTCAGAACTCCATCATAATTCCACCCCGAGAAAGATAAAGATGGTGTGCATGAAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR TCA 72 bp | ATGCACACCATCTTTATCTTTCTCGGGGTGGAATTATaGTGGAGTTCTGACTTTATTGGTACCATGAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: MHTIFIFLGVEL*WSSDFIGTMKV Trigger: GACTTTCATGGTACCAATAAAGTCAGAACTCCATCATAATTCCACCCCGAGAAAGATAAAGATGGTGTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR TCA 90 bp | GATAAGACCTACCCTGCTCCTGTAACCTCTTCACTTGGTCCCCACTCATGTCCTCTCCTCCCACACTCCTaGGTCAGGCTGCGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DKTYPAPVTSSLGPHSCPLLPHS*VRLRRL Trigger: CAGCCTGCGCAGCCTGACTCAGGAGTGTGGGAGGAG...AGGACATGAGTGGGGACCAAGTGAAGAGGTTACAGGAGCAGGGTAGGTCTTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR TCA 90 bp | GCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTTCCTCACCAGGGCCATaGGCTCTGCCAGCTGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: AQDTHLWPFVSLTIDFLASSPGP*ALPAAP Trigger: AGGGGCAGCTGGCAGAGCTCATGGCCCTGGTGAGGA...AGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | CCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCATCTGCCAGCTGCCCCTaGTGCTCCTCCCCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRYTPLALCISDHRLSGSSASCP*CSSPEA Trigger: GGCCTCTGGGGAGGAGCAGCAGGGGCAGCTGGCAGA...TGAGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | GCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCAGGGCCATGAGCTCTaGCAGCTGCCCCTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: AQDTHLWPFVSLTIDFLAQGHEL*QLPLLL Trigger: GAGCAGCAGGGGCAGCTGGCAGAGCTCATGGCCCTG...AGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | ATGTCCTGGCCCTCCCACCTCAGTGCTTCATGCACACCATCTTTATCTTTCTCGTCCAGCTCCCGCCTCTaGTTCTCCACCTCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: MSWPSHLSASCTPSLSFSSSSRL*FSTSCL Trigger: GAGGCAGGAGGTGGAGAAGCAGAGGCGGGAGCTGGA...CGAGAAAGATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | CCCCACTCATGTCCTGGCCCTCCCACCTCAGTGCTTCATGCACACCATCTTTATTACCGCAGCCAGATTTaGCCACCAGGAGGATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PHSCPGPPTSVLHAHHLYYRSQI*PPGGSS Trigger: TGAGGATCCTCCTGGTGGGCAAATCTGGCTGCGGTA...ATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACATGAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR CCA 90 bp | AGCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCGTGCCTGTCTCTGCCTaGCTGGTCCTGGTCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: SPRYTPLALCISDHRLSGVPVSA*LVLVTD Trigger: GTCTGTGACCAGGACCAGCCAGGCAGAGACAGGCAC...GCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR TCA 90 bp | AGCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCACAGACTGGCCTCTaGGCCTGGACTGGAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPRYTPLALCISDHRLSGSQTGL*AWTGML Trigger: CAGCATTCCAGTCCAGGCTCAGAGGCCAGTCTGTGA...GCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | CAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCATTCCTCCCCTCCCATGTaGCTGTCTCTGCCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QDTHLWPFVSLTIDFLAHSSPPM*LSLPGW Trigger: CCAGCCAGGCAGAGACAGGCACATGGGAGGGGAGGA...ATGAGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR CCA 90 bp | CAGTCCATGTGTCTTCCTTTGTGCAAGCCCCCAGACCTTTATAATGGTAGCTACCTGTCTCTGCCTGGCTaGTCCTGGTCACAGACTGGC | + |
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Preference number: 4 (lower is better) Translates to: QSMCLPLCKPPDLYNGSYLSLPG*SWSQTG Trigger: GCCAGTCTGTGACCAGGACCAGCCAGGCAGAGACAG...GTAGCTACCATTATAAAGGTCTGGGGGCTTGCACAAAGGAAGACACATGGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR CCA 90 bp | AGCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCCAACACATGGGGTCCTaGGGCACACAGCAGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SPRYTPLALCISDHRLSGQHMGS*GTQQVA Trigger: TGCTACCTGCTGTGTGCCCCAGGACCCCATGTGTTG...GCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | ACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCATGTGATTACTCCTGAGTCAGGCTaGGCAGGCTGCGGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: THLWPFVSLTIDFLAHVITPESG*AGCGCQ Trigger: CTGACAACCGCAGCCTGCGCAGCCTGACTCAGGAGT...AATCACATGAGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | ATGTCCTGGCCCTCCCACCTCAGTGCTTCATGCACACCATCTTTATCTTTCTCGAAGAAGAGCACATGCTaGAGTGTGGGAGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: MSWPSHLSASCTPSLSFSKKSTC*SVGAPA Trigger: TGCTGGAGCTCCCACACTGCAGCATGTGCTCTTCTT...CGAGAAAGATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | AGCCCCCAGACCTTTATAATGGTAGCTACTTGCTTCATCATCTATCCTCACAACCCATGTGCCTGTCTCTaGCTGGCTGGTCCTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SPQTFIMVATCFIIYPHNPCACL*LAGPGH Trigger: GTGACCAGGACCAGCCAGGCAGAGACAGGCACATGG...GTTGTGAGGATAGATGATGAAGCAAGTAGCTACCATTATAAAGGTCTGGGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | GCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTACCTTCTCTAAGGAGTaGCTCAGCATGAAGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: AQDTHLWPFVSLTIDFLATFSKE*LSMKEE Trigger: CTCTTCCTTCATGCTGAGGCACTCCTTAGAGAAGGT...AGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR CCA 90 bp | ATGTCCTGGCCCTCCCACCTCAGTGCTTCATGCACACCATCTTTATCTTTCTCGTACACAGTGGGCTTCTaGTCCTTGAACTATAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: MSWPSHLSASCTPSLSFSYTVGF*SLNYSS Trigger: GGAACTATAGTTCAAGGACCAGAAGCCCACTGTGTA...CGAGAAAGATAAAGATGGTGTGCATGAAGCACTGAGGTGGGAGGGCCAGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR TCA 90 bp | CAGTCCATGTGTCTTCCTTTGTGCAAGCCCCCAGACCTTTATAATGGTAGCTACTGGGCTTCTGGTCCTTaGACTATAGTTCCATATGTG | + |
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Preference number: 4 (lower is better) Translates to: QSMCLPLCKPPDLYNGSYWASGP*TIVPYV Trigger: CACATATGGAACTATAGTTCAAGGACCAGAAGCCCA...GTAGCTACCATTATAAAGGTCTGGGGGCTTGCACAAAGGAAGACACATGGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR TCA 90 bp | CCCCCAGACCTTTATAATGGTAGCTACTTGCTTCATCATCTATCCTCACAACTTAGGAGTGCCTCAGCATaGAGGAAGAGGTCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PPDLYNGSYLLHHLSSQLRSASA*RKRSLL Trigger: CAGCAATGACCTCTTCCTTCATGCTGAGGCACTCCT...AAGTTGTGAGGATAGATGATGAAGCAAGTAGCTACCATTATAAAGGTCTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR GCA 90 bp | CCTTTGTGCAAGCCCCCAGACCTTTATAATGGTAGCTACTTGCTTCATCATCTAAATAAGAAGAGCACATaGTGCAGTGTGGGAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PLCKPPDLYNGSYLLHHLNKKST*CSVGAP Trigger: TGGAGCTCCCACACTGCAGCATGTGCTCTTCTTATT...TAGATGATGAAGCAAGTAGCTACCATTATAAAGGTCTGGGGGCTTGCACAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| 3UTR CAA 72 bp | TTGTGCAAGCCCCCAGACCTTTATAATGGTAGCTACTaGCTTCATCATCTATCCTCACAACTTCAACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LCKPPDLYNGSY*LHHLSSQLQQR Trigger: TCTTTGTTGAAGTTGTGAGGATAGATGATGAAGCAAGTAGCTACCATTATAAAGGTCTGGGGGCTTGCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CCA 90 bp | ACCATCCTCACAGCCATGGCATCTTCAGCTGTGAAGCGTCCCAGCTaGGTCACCAGTAACAACACATGGGGTCCTGGGGCACACAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TILTAMASSAVKRPS*VTSNNTWGPGAHSR Trigger: CCTGCTGTGTGCCCCAGGACCCCATGTGTTGTTACTGGTGACCCAGCTGGGACGCTTCACAGCTGAAGATGCCATGGCTGTGAGGATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS-3UTR CAA 90 bp | GCCCAAGATACACACCTCTGGCCCTTTGTATCTCTGACCATAGACTTTCTGGCTCAGGCAGCTAGATTCTaGTACACAGTGGGCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AQDTHLWPFVSLTIDFLAQAARF*YTVGFW Trigger: CCAGAAGCCCACTGTGTACAAGAATCTAGCTGCCTG...AGCCAGAAAGTCTATGGTCAGAGATACAAAGGGCCAGAGGTGTGTATCTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS GCA 90 bp | AGTGGTGAGAAGAGTCAAACCAAGCACAATAAGAAGAGCACATGCTaGAGTGTGGGAGCTCCAGCAGGACTTGACTGTGCAAATCATTTT | + |
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Preference number: 5 (lower is better) Translates to: SGEKSQTKHNKKSTC*SVGAPAGLDCANHF Trigger: AAAATGATTTGCACAGTCAAGTCCTGCTGGAGCTCCCACACTGCAGCATGTGCTCTTCTTATTGTGCTTGGTTTGACTCTTCTCACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS GCA 72 bp | ACCTCCTCCCACACTCCTGAGTCAGGCTGCGCAGGCTaGGGTTGTCAGTGTGGGTCACAAACTCTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TSSHTPESGCAG*GCQCGSQTLPR Trigger: CCTTGGAAGAGTTTGTGACCCACACTGACAACCGCAGCCTGCGCAGCCTGACTCAGGAGTGTGGGAGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CCA 72 bp | ACAGCCATGGCATCTTCAGCTGTGAAGCGTCCCAGCTaGGTCACCAGTAACAACACATGGGGTCCTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TAMASSAVKRPS*VTSNNTWGPGA Trigger: TGCCCCAGGACCCCATGTGTTGTTACTGGTGACCCAGCTGGGACGCTTCACAGCTGAAGATGCCATGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS TCA 72 bp | CCTTCACCATCCTCACAGCCATGGCATCTTCAGCTGTaGAGCGTCCCAGCTGGGTCACCAGTAACAACACAT | + |
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Preference number: 6 (lower is better) Translates to: PSPSSQPWHLQL*SVPAGSPVTTH Trigger: ATGTGTTGTTACTGGTGACCCAGCTGGGACGCTTCACAGCTGAAGATGCCATGGCTGTGAGGATGGTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CAA 72 bp | AGAGCACATGCTGCAGTGTGGGAGCTCCAGCAGGACTaGACTGTGCAAATCATTTTAGCTATCCAGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RAHAAVWELQQD*TVQIILAIQLP Trigger: GGGCAGCTGGATAGCTAAAATGATTTGCACAGTCAAGTCCTGCTGGAGCTCCCACACTGCAGCATGTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CAA 90 bp | ACAATAAGAAGAGCACATGCTGCAGTGTGGGAGCTCCAGCAGGACTaGACTGTGCAAATCATTTTAGCTATCCAGCTGCCCTCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TIRRAHAAVWELQQD*TVQIILAIQLPSCS Trigger: GGAGCAGGAGGGCAGCTGGATAGCTAAAATGATTTGCACAGTCAAGTCCTGCTGGAGCTCCCACACTGCAGCATGTGCTCTTCTTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS GCA 72 bp | GGCTTCCTGGTGCACACTGTAACCTTCTCTAAGGAGTaGCTCAGCATGAAGGAAGAGGTCATTGCTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GFLVHTVTFSKE*LSMKEEVIAVE Trigger: TTCCACAGCAATGACCTCTTCCTTCATGCTGAGGCACTCCTTAGAGAAGGTTACAGTGTGCACCAGGAAGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CAA 72 bp | ACAAACTCTTCCAAGGACTTCTCTTCCAGGTCTTCCTaGCGGGTGAAGAGGACGATCATGTGCCTCATGACC | + |
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Preference number: 6 (lower is better) Translates to: TNSSKDFSSRSS*RVKRTIMCLMT Trigger: GGTCATGAGGCACATGATCGTCCTCTTCACCCGCAAGGAAGACCTGGAAGAGAAGTCCTTGGAAGAGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CAA 90 bp | GCAGCCAGATTTGCCCACCAGGAGGATCCTCAGGCAGCTAGATTCTaGTACACAGTGGGCTTCTGGTCCTTGAACTATAGTTCCATATGT | + |
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Preference number: 6 (lower is better) Translates to: AARFAHQEDPQAARF*YTVGFWSLNYSSIC Trigger: ACATATGGAACTATAGTTCAAGGACCAGAAGCCCACTGTGTACAAGAATCTAGCTGCCTGAGGATCCTCCTGGTGGGCAAATCTGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS GCA 72 bp | GAGAAGAGTCAAACCAAGCACAATAAGAAGAGCACATaGTGCAGTGTGGGAGCTCCAGCAGGACTTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: EKSQTKHNKKST*CSVGAPAGLDC Trigger: ACAGTCAAGTCCTGCTGGAGCTCCCACACTGCAGCATGTGCTCTTCTTATTGTGCTTGGTTTGACTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CAA 72 bp | TTTGCCCACCAGGAGGATCCTCAGGCAGCTAGATTCTaGTACACAGTGGGCTTCTGGTCCTTGAACTATAGT | + |
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Preference number: 6 (lower is better) Translates to: FAHQEDPQAARF*YTVGFWSLNYS Trigger: ACTATAGTTCAAGGACCAGAAGCCCACTGTGTACAAGAATCTAGCTGCCTGAGGATCCTCCTGGTGGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CCA 72 bp | AAACCAAGCACAATAAGAAGAGCACATGCTGCAGTGTaGGAGCTCCAGCAGGACTTGACTGTGCAAATCATT | + |
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Preference number: 6 (lower is better) Translates to: KPSTIRRAHAAV*ELQQDLTVQII Trigger: AATGATTTGCACAGTCAAGTCCTGCTGGAGCTCCCACACTGCAGCATGTGCTCTTCTTATTGTGCTTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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| CDS CAA 72 bp | GCAGCTAGATTCTTGTACACAGTGGGCTTCTGGTCCTaGAACTATAGTTCCATATGTGCTCTTCTGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: AARFLYTVGFWS*NYSSICALLKV Trigger: CACCTTCAGAAGAGCACATATGGAACTATAGTTCAAGGACCAGAAGCCCACTGTGTACAAGAATCTAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055558.6 |
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