Pregenerated sensors for GIMAP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054435Ensembl transcript IDs: ENSMUST00000067506.14, ENSMUST00000090070.6, ENSMUST00000118802.8, ENSMUST00000119575.8, ENSMUST00000121957.8, ENSMUST00000156770.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGCTGAGCTGCTAACTTGTGTTCAACCTGGATTATTTGACTTGTaGGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGAT | + |
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Preference number: 1 (lower is better) Translates to: PAELLTCVQPGLFDL*DLLGLQRPAGEQLD Trigger: ATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTTGAACACAAGTTAGCAGCTCAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR TCA 90 bp | GACCAAGGTCAACAATTGCATCTTCTGCTCTTCCTTTTCAGCGCCTaGGGCTCTGTTGTTGAACAAACAGTAGCGATTCTGGAACTCATG | + |
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Preference number: 1 (lower is better) Translates to: DQGQQLHLLLFLFSA*GSVVEQTVAILELM Trigger: CATGAGTTCCAGAATCGCTACTGTTTGTTCAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
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| 3UTR GCA 90 bp | ATTACTTCATCCATGCTCTGGACCAAGGTCAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCTGAGGCTCTGTTGTTGAACAAACAG | + |
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Preference number: 1 (lower is better) Translates to: ITSSMLWTKVNNCIF*SSFSAPEALLLNKQ Trigger: CTGTTTGTTCAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGATGAAGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
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| 3UTR TCA 90 bp | AAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTaGAGATTACTGTTGAGAATCCAGTGGAGAAATGGGTTCATCTTA | + |
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Preference number: 1 (lower is better) Translates to: KAVVQNMGIMCGSCR*RLLLRIQWRNGFIL Trigger: TAAGATGAACCCATTTCTCCACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR TCA 90 bp | AAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTaGGAATCCAGTGGAGAAATGGGTTCATCTTACAGTCATTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: KIWVSCVEAAGEDYC*ESSGEMGSSYSHFL Trigger: CAGAAAATGACTGTAAGATGAACCCATTTCTCCACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR GCA 90 bp | ATTGAACAACTATCAGTGGTAAACTTTACTTCATTACTTCATCCATaGTCTGGACCAAGGTCAACAATTGCATCTTCTGCTCTTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: IEQLSVVNFTSLLHP*SGPRSTIASSALPF Trigger: AAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGATGAAGTAATGAAGTAAAGTTTACCACTGATAGTTGTTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTTCTCAAGGAGAGAGCTaGCTACTGATCACACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: AGWGQKQHDWICSGSGYSSQGES*LLITLV Trigger: CACCAGTGTGATCAGTAGTCAGCTCTCTCCTTGAGA...ACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGATCACAGCAATAAGCAATTaGGCTGGGTGGGGGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GQKQHDWICSGSGYSSQITAISN*AGWGQK Trigger: CTTCTGCCCCCACCCAGCTCAATTGCTTATTGCTGT...GATCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACACTGTGGCCTCCTGGGTaGTTTTCATTTGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: ELGGGRSSMIGYVVVLATLWPPG*FSFEEE Trigger: TTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAG...TGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGACTGTGGCCTCCTGGGTaGTTTTCATTTGAGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GGRSSMIGYVVVLATVARLWPPG*FSFEEE Trigger: TTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAG...TCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATTGAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGCTGTGGCCTCCTGGGTaGTTTTCATTTGAGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AIELGGGRSSMIGYVVVLLWPPG*FSFEEE Trigger: TTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAG...CAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTCAATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTTATGGGTATCATGTGTaGAAGCTGCAGGTGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: AGWGQKQHDWICSGSGYSYGYHV*KLQVKI Trigger: AATCTTCACCTGCAGCTTCCACACATGATACCCATA...ACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACATCAACCTGGATTATTTaGCTTGTGAGATCTTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ELGGGRSSMIGYVVVLATSTWII*LVRSSW Trigger: CCAAGAAGATCTCACAAGTCAAATAATCCAGGTTGA...TGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | GATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAATGTGGAAGCTGCAGGTaGAGATTACTGTTGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: DLLGLQRPAGEQLDAICECGSCR*RLLLRI Trigger: GATTCTCAACAGTAATCTTCACCTGCAGCTTCCACA...TTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATTGAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGACCAAGGTCAACAATTaGATCTTCTGCTCTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AIELGGGRSSMIGYVVVLTKVNN*IFCSSF Trigger: AAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGT...CAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTCAATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATCATTACTTCATCCATaGTCTGGACCAAGGTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: TCEIFLAFKGQLGNNLMPSLLHP*SGPRST Trigger: TGTTGACCTTGGTCCAGAGCATGGATGAAGTAATGA...TGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTACTGTTGAGAATCCAGTaGAGAAATGGGTTCATCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LGGGRSSMIGYVVVLATVLLRIQ*RNGFIL Trigger: TAAGATGAACCCATTTCTCCACTGGATTCTCAACAG...TACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTGGATTATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGACTTCATCCATGCTCTaGACCAAGGTCAACAATTGC | + |
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Preference number: 2 (lower is better) Translates to: NLDYLTCEIFLAFKGQLGTSSML*TKVNNC Trigger: GCAATTGTTGACCTTGGTCCAGAGCATGGATGAAGT...CCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
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| 3UTR CAA 90 bp | GTTCATCTTACAGTCATTTTCTGTGGCCTCCTGGGTGGTTTTCATTaGAGGAAGAACTCAAGGCAGCAGGCAGTAATACGTTCAGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VHLTVIFCGLLGGFH*RKNSRQQAVIRSAL Trigger: CAAAGCTGAACGTATTACTGCCTGCTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAGAAAATGACTGTAAGATGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | AACATACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGTGGGTGGTTTTCATTTaGGGAAGAACTCAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: NIQGSCPKYGYHVWKLQVWVVFI*GRTQGS Trigger: GCTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCA...CACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGTATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTTGGGTGGTTTTCATTTaGGGAAGAACTCAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QGSCPKYGYHVWKLQVKIWVVFI*GRTQGS Trigger: GCTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCA...AATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | TATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGTGCTGTGGCCTCCTGGGTaGTTTTCATTTGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YGYHVWKLQVKITVENPVLWPPG*FSFEEE Trigger: TTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAG...CACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | GATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAATATGGGTATCATGTGTaGAAGCTGCAGGTGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: DLLGLQRPAGEQLDAICEYGYHV*KLQVKI Trigger: AATCTTCACCTGCAGCTTCCACACATGATACCCATA...TTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGTGGTTCTGGCTACAGTAGCCAGATCGTTTCTCAAGGAGAGAGCTGACTACCAGTTGTCCAAAATATaGGTATCATGTGTGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: VVVLATVARSFLKERADYQLSKI*VSCVEA Trigger: AGCTTCCACACATGATACCCATATTTTGGACAACTG...GTAGTCAGCTCTCTCCTTGAGAAACGATCTGGCTACTGTAGCCAGAACCACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATATACAGTCATTTTCTGTaGCCTCCTGGGTGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FLAFKGQLGNNLMPFVKIYSHFL*PPGWFS Trigger: TGAAAACCACCCAGGAGGCCACAGAAAATGACTGTA...TATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATTATGGGTATCATGTGTaGAAGCTGCAGGTGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: LLGLQRPAGEQLDAICENYGYHV*KLQVKI Trigger: AATCTTCACCTGCAGCTTCCACACATGATACCCATA...ATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATATAATTTGTGGAAGCTGCAGGTaGAGATTACTGTTGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: GLQRPAGEQLDAICENIICGSCR*RLLLRI Trigger: GATTCTCAACAGTAATCTTCACCTGCAGCTTCCACA...AATTATATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAATGGGTTCATCTTACAGTCATTTTCTGTGGCCTCCTGGGTGGTTTTCATTTGTGGAAGCTGCAGGTaGAGATTACTGTTGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: RNGFILQSFSVASWVVFICGSCR*RLLLRI Trigger: GATTCTCAACAGTAATCTTCACCTGCAGCTTCCACA...AATGAAAACCACCCAGGAGGCCACAGAAAATGACTGTAAGATGAACCCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATGGATTATTTGACTTGTaGGATCTTCTTGGCCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LLGLQRPAGEQLDAICENGLFDL*DLLGLQ Trigger: TTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCC...ATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTGGATTATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAATCCAGTGGAGAAATaGGTTCATCTTACAGTCATT | + |
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Preference number: 2 (lower is better) Translates to: NLDYLTCEIFLAFKGQLGNPVEK*VHLTVI Trigger: AATGACTGTAAGATGAACCCATTTCTCCACTGGATT...CCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | AACATACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGTGGAGTTTCACAAATTaGAGATTGGTCATTGTCTCG | + |
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Preference number: 2 (lower is better) Translates to: NIQGSCPKYGYHVWKLQVWSFTN*RLVIVS Trigger: CGAGACAATGACCAATCTTCAATTTGTGAAACTCCA...CACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGTATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | TATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGTGGAGAAATGGAGTTTCACAAATTaGAGATTGGTCATTGTCTCG | + |
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Preference number: 2 (lower is better) Translates to: YHVWKLQVKITVENPVEKWSFTN*RLVIVS Trigger: CGAGACAATGACCAATCTTCAATTTGTGAAACTCCA...TTTCTCCACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGTTCAACCTGGATTATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCTGGAGTTTCACAAATTaGAGATTGGTCATTGTCTCG | + |
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Preference number: 2 (lower is better) Translates to: LVFNLDYLTCEIFLAFKGWSFTN*RLVIVS Trigger: CGAGACAATGACCAATCTTCAATTTGTGAAACTCCA...GCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTTGAACACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | GTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTCCTTGTGGAAGCTGCAGGTaGAGATTACTGTTGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: VCYLSLTKDYLMQRLELPCGSCR*RLLLRI Trigger: GATTCTCAACAGTAATCTTCACCTGCAGCTTCCACA...AGGAAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTGTGGCCTCCTGGGTaGTTTTCATTTGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RTVCYLSLTKDYLMQRLELWPPG*FSFEEE Trigger: TTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAG...TTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR CAA 90 bp | TCAAGGCAGCAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATaGAAGATTGGTCATTGTCTCGATAAGTCAATTGAACAACTATCA | + |
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Preference number: 2 (lower is better) Translates to: SRQQAVIRSALEFHK*KIGHCLDKSIEQLS Trigger: TGATAGTTGTTCAATTGACTTATCGAGACAATGACCAATCTTCAATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTGAGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGAGGTGAAGATTACTGTTaGGAATCCAGTGGAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: PLRTVCYLSLTKDYLMQRGEDYC*ESSGEM Trigger: CATTTCTCCACTGGATTCTCAACAGTAATCTTCACC...TCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCTCAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTTGTGGAAGCTGCAGGTaGAGATTACTGTTGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: TVCYLSLTKDYLMQRLELCGSCR*RLLLRI Trigger: GATTCTCAACAGTAATCTTCACCTGCAGCTTCCACA...AAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTCTAAAGATTACCTCATaGAAAGATTGGAACTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SCPKYGYHVWKLQVKITVLKITS*KDWNFL Trigger: TAGGAAGTTCCAATCTTTGCATGAGGTAATCTTTAG...AACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTTATGGGTATCATGTGTaGAAGCTGCAGGTGAAGATT | + |
|
Preference number: 2 (lower is better) Translates to: TVCYLSLTKDYLMQRLELYGYHV*KLQVKI Trigger: AATCTTCACCTGCAGCTTCCACACATGATACCCATA...AAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR TCA 72 bp | GGCTACAGTAGCCAGATCGTTTCTCAAGGAGAGAGCTaGCTACTGATCACACTGGTGAAAAGGTTGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: GYSSQIVSQGES*LLITLVKRLDT Trigger: GGTGTCCAACCTTTTCACCAGTGTGATCAGTAGTCAGCTCTCTCCTTGAGAAACGATCTGGCTACTGTAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR GCA 72 bp | TCCATGCTCTGGACCAAGGTCAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCTGAGGCTCTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SMLWTKVNNCIF*SSFSAPEALLL Trigger: CAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGATCGCTGGGTGGTTTTCATTaGAGGAAGAACTCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRSSMIGYVVVLATVARSLGGFH*RKNSRQ Trigger: CTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAG...CGATCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGATCCTGGGTGGTTTTCATTaGAGGAAGAACTCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GQKQHDWICSGSGYSSQILGGFH*RKNSRQ Trigger: CTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAG...GATCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAATTGAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGCAGCTGGGGAACAACTaGATGCCATTTGTGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: AIELGGGRSSMIGYVVVLQLGNN*MPFVKI Trigger: TATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTG...CAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTCAATTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTTTGGAGTTTCACAAATaGAAGATTGGTCATTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGWGQKQHDWICSGSGYSLEFHK*KIGHCL Trigger: GAGACAATGACCAATCTTCAATTTGTGAAACTCCAA...ACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGGACCAAGGTCAACAATaGCATCTTCTGCTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LTCEIFLAFKGQLGNNLMDQGQQ*HLLLFL Trigger: AAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTC...CATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
||
| 3UTR TCA 72 bp | TCTGCTCTTCCTTTTCAGCGCCTGAGGCTCTGTTGTTaGACAAACAGTAGCGATTCTGGAACTCATGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SALPFQRLRLCC*TNSSDSGTHAS Trigger: TGATGCATGAGTTCCAGAATCGCTACTGTTTGTTCAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
||
| 3UTR GCA 72 bp | ATTACTTCATCCATGCTCTGGACCAAGGTCAACAATTaGATCTTCTGCTCTTCCTTTTCAGCGCCTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ITSSMLWTKVNN*IFCSSFSAPEA Trigger: AGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGATGAAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGATTGGAGTTTCACAAATaGAAGATTGGTCATTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGRSSMIGYVVVLATVARLEFHK*KIGHCL Trigger: GAGACAATGACCAATCTTCAATTTGTGAAACTCCAA...TCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGAGTAATACGTTCAGCTTaGGAGTTTCACAAATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GGRSSMIGYVVVLATVARVIRSA*EFHKLK Trigger: CTTCAATTTGTGAAACTCCAAAGCTGAACGTATTAC...TCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR TCA 72 bp | CTGCTAACTTGTGTTCAACCTGGATTATTTGACTTGTaGGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTCVQPGLFDL*DLLGLQRPAGE Trigger: TTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTTGAACACAAGTTAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR TCA 72 bp | CAACAATTGCATCTTCTGCTCTTCCTTTTCAGCGCCTaGGGCTCTGTTGTTGAACAAACAGTAGCGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QQLHLLLFLFSA*GSVVEQTVAIL Trigger: CAGAATCGCTACTGTTTGTTCAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGATCGGTAATACGTTCAGCTTaGGAGTTTCACAAATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRSSMIGYVVVLATVARSVIRSA*EFHKLK Trigger: CTTCAATTTGTGAAACTCCAAAGCTGAACGTATTAC...CGATCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATGGGTTCATCTTACAGTCATTTTCTGTGGCCTCCTGGGTGGTTTTCATTCTGGGTGGTTTTCATTaGAGGAAGAACTCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RNGFILQSFSVASWVVFILGGFH*RKNSRQ Trigger: CTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAG...AATGAAAACCACCCAGGAGGCCACAGAAAATGACTGTAAGATGAACCCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATCAGCTGGGGAACAACTaGATGCCATTTGTGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: LLGLQRPAGEQLDAICENQLGNN*MPFVKI Trigger: TATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTG...ATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR CCA 72 bp | AGTGGAGAAATGGGTTCATCTTACAGTCATTTTCTGTaGCCTCCTGGGTGGTTTTCATTTGAGGAAGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: SGEMGSSYSHFL*PPGWFSFEEEL Trigger: GAGTTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAGAAAATGACTGTAAGATGAACCCATTTCTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAATTGGAGTTTCACAAATaGAAGATTGGTCATTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLLGLQRPAGEQLDAICELEFHK*KIGHCL Trigger: GAGACAATGACCAATCTTCAATTTGTGAAACTCCAA...TTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGAAACATACAAGGCAGTaGTCCAAAATATGGGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: LTCEIFLAFKGQLGNNLMKHTRQ*SKIWVS Trigger: TGATACCCATATTTTGGACAACTGCCTTGTATGTTT...CATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR TCA 72 bp | GTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTaGGAATCCAGTGGAGAAATGGGTTCATCTTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: VSCVEAAGEDYC*ESSGEMGSSYS Trigger: ACTGTAAGATGAACCCATTTCTCCACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGGTAATACGTTCAGCTTaGGAGTTTCACAAATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YLTCEIFLAFKGQLGNNLVIRSA*EFHKLK Trigger: CTTCAATTTGTGAAACTCCAAAGCTGAACGTATTAC...CAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR CCA 72 bp | ATACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTaGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: IQGSCPKYGYHV*KLQVKITVENP Trigger: TGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR CCA 72 bp | AGTGGTAAACTTTACTTCATTACTTCATCCATGCTCTaGACCAAGGTCAACAATTGCATCTTCTGCTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SGKLYFITSSML*TKVNNCIFCSS Trigger: GGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGATGAAGTAATGAAGTAAAGTTTACCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTTGGAGTTTCACAAATaGAAGATTGGTCATTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RQLSKIWVSCVEAAGEDYLEFHK*KIGHCL Trigger: GAGACAATGACCAATCTTCAATTTGTGAAACTCCAA...GTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCATTGAGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAACTGGGTGGTTTTCATTaGAGGAAGAACTCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CPLRTVCYLSLTKDYLMQLGGFH*RKNSRQ Trigger: CTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAG...TTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCTCAATGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATATAATTAAAGTAATACGTTCAGCTTaGGAGTTTCACAAATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQRPAGEQLDAICENIIKVIRSA*EFHKLK Trigger: CTTCAATTTGTGAAACTCCAAAGCTGAACGTATTAC...TTTAATTATATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTCCTAAACATACAAGGCAGTaGTCCAAAATATGGGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: VCYLSLTKDYLMQRLELPKHTRQ*SKIWVS Trigger: TGATACCCATATTTTGGACAACTGCCTTGTATGTTT...AGGAAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTTTGGAGTTTCACAAATaGAAGATTGGTCATTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TVCYLSLTKDYLMQRLELLEFHK*KIGHCL Trigger: GAGACAATGACCAATCTTCAATTTGTGAAACTCCAA...AAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCCTGGGTGGTTTTCATTTGAGGAAGAACTCAAGGCAGCAGGCAGTAATACCAGGAGCAGAGCATaGGGCCCTGGAGAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPPGWFSFEEELKAAGSNTRSRA*GPGEVR Trigger: CCTGACCTCTCCAGGGCCTCATGCTCTGCTCCTGGT...ATTACTGCCTGCTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAGGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR TCA 90 bp | TTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGTTGAACTTTCTGGGATaGACCCCGCACCACCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LTCEIFLAFKGQLGNNLMLNFLG*TPHHRT Trigger: AGTGCGGTGGTGCGGGGTTCATCCCAGAAAGTTCAA...CATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTGGTTCTGGCTACAGTAGCCAGATCGTTTCTCAAGGAGAGAGCTGACTACGGGCAACATAGCGAGTaGTCTCCCTTTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVVLATVARSFLKERADYGQHSE*SPFVCQ Trigger: CTGACACACAAAGGGAGATCACTCGCTATGTTGCCC...GTAGTCAGCTCTCTCCTTGAGAAACGATCTGGCTACTGTAGCCAGAACCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCAACCTGGATTATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCACCAGGAGCAGAGCATaGGGCCCTGGAGAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVFNLDYLTCEIFLAFKGTRSRA*GPGEVR Trigger: CCTGACCTCTCCAGGGCCTCATGCTCTGCTCCTGGT...GCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTTGAACACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCTCCTGGGTGGTTTTCATTTGAGGAAGAACTCAAGGCAGCAGGCAGTCTCAAGGTCTCTTTCTaGATCACACACTCGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LWPPGWFSFEEELKAAGSLKVSF*ITHSAL Trigger: AAGTGCCGAGTGTGTGATCCAGAAAGAGACCTTGAG...ACTGCCTGCTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAGGAGGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090070.6 |
||
| CDS-3UTR TCA 90 bp | TATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGTTGAACTTTCTGGGATaGACCCCGCACCACCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: YLTCEIFLAFKGQLGNNLLNFLG*TPHHRT Trigger: AGTGCGGTGGTGCGGGGTTCATCCCAGAAAGTTCAA...CAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAAGTTGGGGAATTCCTTaGTCTTGGTTTCCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELGGGRSSMIGYVVVLATSWGIP*SWFPSS Trigger: TGAGCTTGGAAACCAAGATCAAGGAATTCCCCAACT...TGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACCAGAGCATGAGGCCCTaGAGAGGTCAGGGCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: RQLSKIWVSCVEAAGEDYQSMRP*RGQGNI Trigger: TATGTTGCCCTGACCTCTCCAGGGCCTCATGCTCTG...GTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR CCA 90 bp | TGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTTCCCTCACCATGCTCTaGACCAAGGTCAACAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CEIFLAFKGQLGNNLMPFSLTML*TKVNNC Trigger: GCAATTGTTGACCTTGGTCCAGAGCATGGTGAGGGA...AAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090070.6 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATTGAAGATTGGTTTGAACTTTCTGGGATaGACCCCGCACCACCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RQQAVIRSALEFHKLKIGLNFLG*TPHHRT Trigger: AGTGCGGTGGTGCGGGGTTCATCCCAGAAAGTTCAA...ACCAATCTTCAATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGCAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATTGAAGATTGGTTGAACTTTCTGGGATaGACCCCGCACCACCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KAAGSNTFSFGVSQIEDWLNFLG*TPHHRT Trigger: AGTGCGGTGGTGCGGGGTTCATCCCAGAAAGTTCAA...CCAATCTTCAATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTTGAACTTTCTGGGATaGACCCCGCACCACCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLSKIWVSCVEAAGEDYCLNFLG*TPHHRT Trigger: AGTGCGGTGGTGCGGGGTTCATCCCAGAAAGTTCAA...ACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTCATTTTCCCTCACCATaGTCTGGACCAAGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CEIFLAFKGQLGNNLMPFHFPSP*SGPRST Trigger: TGTTGACCTTGGTCCAGAGCATGGTGAGGGAAAATG...AAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090070.6 |
||
| CDS-3UTR TCA 90 bp | ATACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGGAGCATGTTCCCTGTTaGACTCTTTCCTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IQGSCPKYGYHVWKLQVKEHVPC*TLSCSS Trigger: ACTGGAGCAGGAAAGAGTTCAACAGGGAACATGCTC...CTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119575.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATTTCCAAGCTCATGGCTaGTCCTTGAACTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLQRPAGEQLDAICENFQAHG*SLNFLG Trigger: TCCCAGAAAGTTCAAGGAGCAGCCATGAGCTTGGAA...ATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGTGGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGTGGAGAAATGGTTCCAAGCTCATGGCTaGTCCTTGAACTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVWKLQVKITVENPVEKWFQAHG*SLNFLG Trigger: TCCCAGAAAGTTCAAGGAGCAGCCATGAGCTTGGAA...CCATTTCTCCACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | TTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCGATTCTGGAACTCATaGATCACCTTGTTCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTCEIFLAFKGQLGNNLMRFWNS*ITLFPV Trigger: AACAGGGAACAAGGTGATGCATGAGTTCCAGAATCG...CATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121957.8 |
||
| CDS-3UTR CCA 90 bp | AACCTGGATTATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGGACAGAAACATGCTCTaGACCAAGGTCAACAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLDYLTCEIFLAFKGQLGDRNML*TKVNNC Trigger: GCAATTGTTGACCTTGGTCCAGAGCATGTTTCTGTC...CCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067506.14 |
||
| CDS-3UTR CCA 90 bp | GATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAACTTCATCCATGCTCTaGACCAAGGTCAACAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLGLQRPAGEQLDAICETSSML*TKVNNC Trigger: GCAATTGTTGACCTTGGTCCAGAGCATGGATGAAGT...TTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121957.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATAGTTGGGGAATTCCTTaGTCTTGGTTTCCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLQRPAGEQLDAICENSWGIP*SWFPSS Trigger: TGAGCTTGGAAACCAAGATCAAGGAATTCCCCAACT...ATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTTCATCTTACAGTCATTTTCTGTGGCCTCCTGGGTGGTTTTCATTTGAGGAGTTGGGGAATTCCTTaGTCTTGGTTTCCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVHLTVIFCGLLGGFHLRSWGIP*SWFPSS Trigger: TGAGCTTGGAAACCAAGATCAAGGAATTCCCCAACT...CCTCAAATGAAAACCACCCAGGAGGCCACAGAAAATGACTGTAAGATGAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATGATACTGTTCCCTGTTaGACTCTTTCCTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRQLSKIWVSCVEAAGEDDTVPC*TLSCSS Trigger: ACTGGAGCAGGAAAGAGTTCAACAGGGAACAGTATC...ATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAACTCAAGGCAGCAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATTCACCTTGTTCCCTGTTaGACTCTTTCCTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EELKAAGSNTFSFGVSQIHLVPC*TLSCSS Trigger: ACTGGAGCAGGAAAGAGTTCAACAGGGAACAAGGTG...AATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCTTGAGTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121957.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGATCACCAAGGTCAACAATTaGATCTTCTGCTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQKQHDWICSGSGYSSQITKVNN*IFCSSF Trigger: AAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGT...GATCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCCTGGGTGGTTTTCATTTGAGGAAGAACTCAAGGCAGCAGGCAGTAATACCAAGGTCAACAATTaGATCTTCTGCTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPPGWFSFEEELKAAGSNTKVNN*IFCSSF Trigger: AAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGT...ATTACTGCCTGCTGCCTTGAGTTCTTCCTCAAATGAAAACCACCCAGGAGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTACTTCATTACTTCATCCTGGAAGACAGAAACTAGAGCATTTGGGCATCCAGAGCATGAGGCCCTaGAGAGGTCAGGGCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: NFTSLLHPGRQKLEHLGIQSMRP*RGQGNI Trigger: TATGTTGCCCTGACCTCTCCAGGGCCTCATGCTCTG...GATGCCCAAATGCTCTAGTTTCTGTCTTCCAGGATGAAGTAATGAAGTAAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090070.6 |
||
| 3UTR CAA 72 bp | GTGTTCAACCTGGATTATTTGACTTGTGAGATCTTCTaGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VFNLDYLTCEIF*AFKGQLGNNLM Trigger: CATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTTGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATGGGTTCATCTTACAGTCATTTTCTGTGGCCTCCTGGGTGGTTTTCATTGATACTGTTCCCTGTTaGACTCTTTCCTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNGFILQSFSVASWVVFIDTVPC*TLSCSS Trigger: ACTGGAGCAGGAAAGAGTTCAACAGGGAACAGTATC...AATGAAAACCACCCAGGAGGCCACAGAAAATGACTGTAAGATGAACCCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | GAACTCAAGGCAGCAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATTGAAGATACTGTTCCCTGTTaGACTCTTTCCTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELKAAGSNTFSFGVSQIEDTVPC*TLSCSS Trigger: ACTGGAGCAGGAAAGAGTTCAACAGGGAACAGTATC...TTCAATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCTTGAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTACTTGGTGATGGATTTTaGACAAATGCCAGAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGGGRSSMIGYVVVLATVLGDGF*TNARIK Trigger: TTTAATTCTGGCATTTGTGCAAAATCCATCACCAAG...TACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAACTCAAGGCAGCAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATTAGTTGGGGAATTCCTTaGTCTTGGTTTCCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EELKAAGSNTFSFGVSQISWGIP*SWFPSS Trigger: TGAGCTTGGAAACCAAGATCAAGGAATTCCCCAACT...AATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCTTGAGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | TATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGTGGAGAAAAGTTGGGGAATTCCTTaGTCTTGGTTTCCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YHVWKLQVKITVENPVEKSWGIP*SWFPSS Trigger: TGAGCTTGGAAACCAAGATCAAGGAATTCCCCAACT...TTTCTCCACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR TCA 90 bp | CCATTGAGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGAGGGCAACATAGCGAGTaGTCTCCCTTTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRTVCYLSLTKDYLMQRGQHSE*SPFVCQ Trigger: CTGACACACAAAGGGAGATCACTCGCTATGTTGCCC...TCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCTCAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR GCA 90 bp | GGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGTAGCCAGATCCTTGGTGATGGATTTTaGACAAATGCCAGAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQKQHDWICSGSGYSSQILGDGF*TNARIK Trigger: TTTAATTCTGGCATTTGTGCAAAATCCATCACCAAG...GATCTGGCTACTGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATAAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLAFKGQLGNNLMPFVKINNCIF*SSFSAP Trigger: AGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTT...TATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTACTTCATTACTTCATCCTGGAAGACAGAAACTAGAGCATTTGGGCATCTTCCAAGCTCATGGCTaGTCCTTGAACTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NFTSLLHPGRQKLEHLGIFQAHG*SLNFLG Trigger: TCCCAGAAAGTTCAAGGAGCAGCCATGAGCTTGGAA...GATGCCCAAATGCTCTAGTTTCTGTCTTCCAGGATGAAGTAATGAAGTAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090070.6 |
||
| CDS-3UTR GCA 90 bp | GGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATATAATTAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLQRPAGEQLDAICENIINNCIF*SSFSAP Trigger: AGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTT...AATTATATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGTGGAGAAATGGGTTCATCTTTCATTACTTCATCCATaGTCTGGACCAAGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KLQVKITVENPVEKWVHLSLLHP*SGPRST Trigger: TGTTGACCTTGGTCCAGAGCATGGATGAAGTAATGA...AAGATGAACCCATTTCTCCACTGGATTCTCAACAGTAATCTTCACCTGCAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121957.8 |
||
| 3UTR CAA 72 bp | AAGAACTCAAGGCAGCAGGCAGTAATACGTTCAGCTTaGGAGTTTCACAAATTGAAGATTGGTCATTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNSRQQAVIRSA*EFHKLKIGHCL Trigger: GAGACAATGACCAATCTTCAATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCTTGAGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCATTGAGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAATTCCAAGCTCATGGCTaGTCCTTGAACTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPLRTVCYLSLTKDYLMQFQAHG*SLNFLG Trigger: TCCCAGAAAGTTCAAGGAGCAGCCATGAGCTTGGAA...TTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCTCAATGGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATATAATTAAATTCCAAGCTCATGGCTaGTCCTTGAACTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQRPAGEQLDAICENIIKFQAHG*SLNFLG Trigger: TCCCAGAAAGTTCAAGGAGCAGCCATGAGCTTGGAA...TTTAATTATATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | ATACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGCTTGGTGATGGATTTTaGACAAATGCCAGAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQGSCPKYGYHVWKLQVKLGDGF*TNARIK Trigger: TTTAATTCTGGCATTTGTGCAAAATCCATCACCAAG...CTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
||
| CDS-3UTR GCA 90 bp | GTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTCCTAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCYLSLTKDYLMQRLELPNNCIF*SSFSAP Trigger: AGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTT...AGGAAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTTGGAAGACAGAAACATaGTCTGGACCAAGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TVCYLSLTKDYLMQRLELWKTET*SGPRST Trigger: TGTTGACCTTGGTCCAGAGCATGTTTCTGTCTTCCA...AAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067506.14 |
||
| CDS-3UTR GCA 90 bp | TGTCCATTGAGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAACCAAGGTCAACAATTaGATCTTCTGCTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPLRTVCYLSLTKDYLMQTKVNN*IFCSSF Trigger: AAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGT...TTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCTCAATGGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
||
| 3UTR CAA 72 bp | CAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATaGAAGATTGGTCATTGTCTCGATAAGTCAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAVIRSALEFHK*KIGHCLDKSIE Trigger: TTCAATTGACTTATCGAGACAATGACCAATCTTCAATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
||
| CDS CCA 90 bp | AGTATAACGCCCCAGTGGAACTACCAGGAGCAGAGCATGAGGCCCTaGAGAGGTCAGGGCAACATAGCGAGTGATCTCCCTTTGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SITPQWNYQEQSMRP*RGQGNIASDLPLCV Trigger: GACACACAAAGGGAGATCACTCGCTATGTTGCCCTGACCTCTCCAGGGCCTCATGCTCTGCTCCTGGTAGTTCCACTGGGGCGTTATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS TCA 90 bp | GGAGCAGAGCATGAGGCCCTGGAGAGGTCAGGGCAACATAGCGAGTaGTCTCCCTTTGTGTGTCAGCATCTGGTACCTCAGTGTCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAEHEALERSGQHSE*SPFVCQHLVPQCQK Trigger: TTTTTGACACTGAGGTACCAGATGCTGACACACAAAGGGAGATCACTCGCTATGTTGCCCTGACCTCTCCAGGGCCTCATGCTCTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCTACAGCGAGTGATCTCCCTTaGTGTGTCAGCATCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ELGGGRSSMIGYVVVLATASDLP*CVSIWY Trigger: GTACCAGATGCTGACACACAAAGGGAGATCACTCGC...TGTAGCCAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR CAA 90 bp | GCAATTGAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGGCGAGTGATCTCCCTTaGTGTGTCAGCATCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AIELGGGRSSMIGYVVVLASDLP*CVSIWY Trigger: GTACCAGATGCTGACACACAAAGGGAGATCACTCGC...CAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTCAATTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
||
| CDS-3UTR CAA 90 bp | GCAATTGAGCTGGGTGGGGGCAGAAGCAGCATGATTGGATATGTAGTGGTTCTGCAGTTGGGGAATTCCTaGATCTTGGTTTCCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AIELGGGRSSMIGYVVVLQLGNS*ILVSKL Trigger: GAGCTTGGAAACCAAGATCAAGGAATTCCCCAACTG...CAGAACCACTACATATCCAATCATGCTGCTTCTGCCCCCACCCAGCTCAATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000156770.8 |
||
| CDS-3UTR CAA 90 bp | AACCTGGATTATTTGACTTGTGAGATCTTCTTGGCCTTCAAAGGCCAGCTGGGGGGATACTGTTCCCTGTaGAACTCTTTCCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLDYLTCEIFLAFKGQLGGYCSL*NSFLLQ Trigger: CTGGAGCAGGAAAGAGTTCAACAGGGAACAGTATCC...CCCCAGCTGGCCTTTGAAGGCCAAGAAGATCTCACAAGTCAAATAATCCAGGTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
||
| CDS GCA 90 bp | TTTTCCCTCACCATGCTCTGGACCAAGGTCAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCTGAGGCTCTGTTGTTGAACAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSLTMLWTKVNNCIF*SSFSAPEALLLNKQ Trigger: CTGTTTGTTCAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGTGAGGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS GCA 90 bp | GAAGACAGAAACATGCTCTGGACCAAGGTCAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCTGAGGCTCTGTTGTTGAACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: EDRNMLWTKVNNCIF*SSFSAPEALLLNKQ Trigger: CTGTTTGTTCAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGTTTCTGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067506.14 |
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| CDS GCA 90 bp | CTTATCCGTGCTTTCTCCCTCTCTAGCTCCTCTCTGTATAATTCTTaGATCCTCAAGGTCTCTTTCTGGATCACACACTCGGCACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LIRAFSLSSSSLYNS*ILKVSFWITHSALS Trigger: TGAAAGTGCCGAGTGTGTGATCCAGAAAGAGACCTTGAGGATGCAAGAATTATACAGAGAGGAGCTAGAGAGGGAGAAAGCACGGATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS-3UTR CAA 90 bp | CTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAAATCAGTTGGGGAATTCCTaGATCTTGGTTTCCAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LLGLQRPAGEQLDAICENQLGNS*ILVSKL Trigger: GAGCTTGGAAACCAAGATCAAGGAATTCCCCAACTG...ATTTTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| CDS-3UTR CAA 90 bp | GATCTTCTTGGCCTTCAAAGGCCAGCTGGGGAACAACTTGATGCCATTTGTGAAGACCAAGGTCAACAATaGCATCTTCTGCTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: DLLGLQRPAGEQLDAICEDQGQQ*HLLLFL Trigger: AAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTC...TTCACAAATGGCATCAAGTTGTTCCCCAGCTGGCCTTTGAAGGCCAAGAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
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| CDS-3UTR CAA 90 bp | AACATACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGCAGTTGGGGAATTCCTaGATCTTGGTTTCCAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: NIQGSCPKYGYHVWKLQVQLGNS*ILVSKL Trigger: GAGCTTGGAAACCAAGATCAAGGAATTCCCCAACTG...CACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGTATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| CDS-3UTR CAA 90 bp | AACTCAAGGCAGCAGGCAGTAATACGTTCAGCTTTGGAGTTTCACAAATTGAAGGGATACTGTTCCCTGTaGAACTCTTTCCTGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: NSRQQAVIRSALEFHKLKGYCSL*NSFLLQ Trigger: CTGGAGCAGGAAAGAGTTCAACAGGGAACAGTATCC...CTTCAATTTGTGAAACTCCAAAGCTGAACGTATTACTGCCTGCTGCCTTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
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| CDS-3UTR CAA 90 bp | AAACATACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTCAGTTGGGGAATTCCTaGATCTTGGTTTCCAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: KHTRQLSKIWVSCVEAAGQLGNS*ILVSKL Trigger: GAGCTTGGAAACCAAGATCAAGGAATTCCCCAACTG...ACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGTATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| CDS-3UTR CAA 90 bp | TATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGTGGACCAAGGTCAACAATaGCATCTTCTGCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YGYHVWKLQVKITVENPVDQGQQ*HLLLFL Trigger: AAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTC...CACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
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| CDS-3UTR CAA 90 bp | ACAAGGCAGTTGTCCAAAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATCTCATGCATCACCTCTaGAAAGAATTTAGGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: TRQLSKIWVSCVEAAGEDLMHHL*KEFRSL Trigger: AAGGCTCCTAAATTCTTTCAAGAGGTGATGCATGAG...ATCTTCACCTGCAGCTTCCACACATGATACCCATATTTTGGACAACTGCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
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| CDS-3UTR CAA 90 bp | TATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGTGCTCATGCATCACCTCTaGAAAGAATTTAGGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YGYHVWKLQVKITVENPVLMHHL*KEFRSL Trigger: AAGGCTCCTAAATTCTTTCAAGAGGTGATGCATGAG...CACTGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
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| CDS-3UTR CAA 90 bp | ACTTTACTTCATTACTTCATCCATGCTCTGGACCAAGGTCAACAATTGCATCTTCAGTTGGGGAATTCCTaGATCTTGGTTTCCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLHYFIHALDQGQQLHLQLGNS*ILVSKL Trigger: GAGCTTGGAAACCAAGATCAAGGAATTCCCCAACTG...AAGATGCAATTGTTGACCTTGGTCCAGAGCATGGATGAAGTAATGAAGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156770.8 |
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| CDS-3UTR CAA 90 bp | AAATATGGGTATCATGTGTGGAAGCTGCAGGTGAAGATTACTGTTGAGAATCCAGACCAAGGTCAACAATaGCATCTTCTGCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KYGYHVWKLQVKITVENPDQGQQ*HLLLFL Trigger: AAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTC...TGGATTCTCAACAGTAATCTTCACCTGCAGCTTCCACACATGATACCCATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000121957.8 |
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| CDS-3UTR CAA 90 bp | TGTCCATTGAGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAATAGCCTCCCTCTCCTaGAATTCCCTCTCCATACGT | + |
|
Preference number: 5 (lower is better) Translates to: CPLRTVCYLSLTKDYLMQIASLS*NSLSIR Trigger: ACGTATGGAGAGGGAATTCAAGGAGAGGGAGGCTAT...TTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCTCAATGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090070.6 |
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| CDS-3UTR CAA 90 bp | AGAACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAAGGATACTGTTCCCTGTaGAACTCTTTCCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTVCYLSLTKDYLMQRLEGYCSL*NSFLLQ Trigger: CTGGAGCAGGAAAGAGTTCAACAGGGAACAGTATCC...TTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000156770.8 |
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| CDS-3UTR CAA 90 bp | ACTGTATGCTATCTATCTCTGACTAAAGATTACCTCATGCAAAGATTGGAACTTTCACCTTGTTCCCTGTaGAACTCTTTCCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVCYLSLTKDYLMQRLELSPCSL*NSFLLQ Trigger: CTGGAGCAGGAAAGAGTTCAACAGGGAACAAGGTGA...AAGTTCCAATCTTTGCATGAGGTAATCTTTAGTCAGAGATAGATAGCATACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121957.8 |
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| CDS CCA 90 bp | TCTAGCTCCTCTCTGTATAATTCTTGCATCCTCAAGGTCTCTTTCTaGATCACACACTCGGCACTTTCATACATCTTATTAGTAAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLYNSCILKVSF*ITHSALSYILLVKH Trigger: ATGCTTTACTAATAAGATGTATGAAAGTGCCGAGTGTGTGATCCAGAAAGAGACCTTGAGGATGCAAGAATTATACAGAGAGGAGCTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS CCA 72 bp | CCCCAGTGGAACTACCAGGAGCAGAGCATGAGGCCCTaGAGAGGTCAGGGCAACATAGCGAGTGATCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PQWNYQEQSMRP*RGQGNIASDLP Trigger: AGGGAGATCACTCGCTATGTTGCCCTGACCTCTCCAGGGCCTCATGCTCTGCTCCTGGTAGTTCCACTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
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| CDS TCA 72 bp | CATGAGGCCCTGGAGAGGTCAGGGCAACATAGCGAGTaGTCTCCCTTTGTGTGTCAGCATCTGGTACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HEALERSGQHSE*SPFVCQHLVPQ Trigger: CTGAGGTACCAGATGCTGACACACAAAGGGAGATCACTCGCTATGTTGCCCTGACCTCTCCAGGGCCTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
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| CDS TCA 72 bp | TCCTTGATCTTGGTTTCCAAGCTCATGGCTGCTCCTTaGACTTTCTGGGATGAACCCCGCACCACCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SLILVSKLMAAP*TFWDEPRTTAL Trigger: CAGTGCGGTGGTGCGGGGTTCATCCCAGAAAGTTCAAGGAGCAGCCATGAGCTTGGAAACCAAGATCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 ENSMUST00000118802.8 ENSMUST00000119575.8 ENSMUST00000121957.8 ENSMUST00000156770.8 |
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| CDS CAA 90 bp | ATGAGGCCCTGGAGAGGTCAGGGCAACATAGCGAGTGATCTCCCTTaGTGTGTCAGCATCTGGTACCTCAGTGTCAAAAATACCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: MRPWRGQGNIASDLP*CVSIWYLSVKNTRC Trigger: ACACCTGGTATTTTTGACACTGAGGTACCAGATGCTGACACACAAAGGGAGATCACTCGCTATGTTGCCCTGACCTCTCCAGGGCCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
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| CDS GCA 72 bp | ACCATGCTCTGGACCAAGGTCAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCTGAGGCTCTGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: TMLWTKVNNCIF*SSFSAPEALLL Trigger: CAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS GCA 72 bp | TTTTCCCTCACCATGCTCTGGACCAAGGTCAACAATTaGATCTTCTGCTCTTCCTTTTCAGCGCCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FSLTMLWTKVNN*IFCSSFSAPEA Trigger: AGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGTGAGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS GCA 72 bp | AACATGCTCTGGACCAAGGTCAACAATTGCATCTTCTaGTCTTCCTTTTCAGCGCCTGAGGCTCTGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NMLWTKVNNCIF*SSFSAPEALLL Trigger: CAACAACAGAGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067506.14 |
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| CDS GCA 72 bp | GAAGACAGAAACATGCTCTGGACCAAGGTCAACAATTaGATCTTCTGCTCTTCCTTTTCAGCGCCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: EDRNMLWTKVNN*IFCSSFSAPEA Trigger: AGCCTCAGGCGCTGAAAAGGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGTTTCTGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067506.14 |
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| CDS CAA 72 bp | TGGAGAGGTCAGGGCAACATAGCGAGTGATCTCCCTTaGTGTGTCAGCATCTGGTACCTCAGTGTCAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: WRGQGNIASDLP*CVSIWYLSVKN Trigger: ATTTTTGACACTGAGGTACCAGATGCTGACACACAAAGGGAGATCACTCGCTATGTTGCCCTGACCTCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067506.14 ENSMUST00000090070.6 |
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| CDS CCA 72 bp | GTAAAGCATCTTCCACCATTTTCCCTCACCATGCTCTaGACCAAGGTCAACAATTGCATCTTCTGCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKHLPPFSLTML*TKVNNCIFCSS Trigger: GGAAGAGCAGAAGATGCAATTGTTGACCTTGGTCCAGAGCATGGTGAGGGAAAATGGTGGAAGATGCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS CAA 72 bp | AGCGATTCTGGAACTCATGCATCACCTTGTTCCCTGTaGAACTCTTTCCTGCTCCAGTTTTTCCAAGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SDSGTHASPCSL*NSFLLQFFQVR Trigger: TCTTACTTGGAAAAACTGGAGCAGGAAAGAGTTCAACAGGGAACAAGGTGATGCATGAGTTCCAGAATCGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118802.8 ENSMUST00000121957.8 |
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| CDS CAA 90 bp | ACAAACAGTAGCGATTCTGGAACTCATGCATCACCTTGTTCCCTGTaGAACTCTTTCCTGCTCCAGTTTTTCCAAGTAAGACAATTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TNSSDSGTHASPCSL*NSFLLQFFQVRQFS Trigger: TGAGAATTGTCTTACTTGGAAAAACTGGAGCAGGAAAGAGTTCAACAGGGAACAAGGTGATGCATGAGTTCCAGAATCGCTACTGTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118802.8 ENSMUST00000121957.8 |
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| CDS CAA 90 bp | TTCAAGTATCATACTTGTGTTCTCAACTTCCTTCCTAGCATTTTGTaGATTCTTTGTAAAGATAGCCTCCCTCTCCTTGAATTCCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FKYHTCVLNFLPSIL*ILCKDSLPLLEFPL Trigger: GAGAGGGAATTCAAGGAGAGGGAGGCTATCTTTACAAAGAATCAACAAAATGCTAGGAAGGAAGTTGAGAACACAAGTATGATACTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS CCA 72 bp | TCTCTGTATAATTCTTGCATCCTCAAGGTCTCTTTCTaGATCACACACTCGGCACTTTCATACATCTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: SLYNSCILKVSF*ITHSALSYILL Trigger: TAATAAGATGTATGAAAGTGCCGAGTGTGTGATCCAGAAAGAGACCTTGAGGATGCAAGAATTATACAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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| CDS CAA 72 bp | TATCATACTTGTGTTCTCAACTTCCTTCCTAGCATTTaGTTGATTCTTTGTAAAGATAGCCTCCCTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YHTCVLNFLPSI*LILCKDSLPLL Trigger: AAGGAGAGGGAGGCTATCTTTACAAAGAATCAACAAAATGCTAGGAAGGAAGTTGAGAACACAAGTATGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090070.6 ENSMUST00000118802.8 |
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