Pregenerated sensors for GIMAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039264Ensembl transcript IDs: ENSMUST00000038811.10, ENSMUST00000204036.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATTAACAAAGAACAAAGAAGTGGGCATCAGGGGACATGAGGGCTaGAGTCAGGCGCCAGGTGGCGGGCACTCTGAGTCTTATCTCCGG | + |
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Preference number: 1 (lower is better) Translates to: ELTKNKEVGIRGHEG*SQAPGGGHSESYLR Trigger: CCGGAGATAAGACTCAGAGTGCCCGCCACCTGGCGCCTGACTTCAGCCCTCATGTCCCCTGATGCCCACTTCTTTGTTCTTTGTTAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR CCA 90 bp | AGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCCTGTCAGGGTaGGAGACTGTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: SDNRLLSTRPFGLSG*ETVKSSLSHGMVSN Trigger: GTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCACAGTCTCCCACCCTGACAGGCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR CCA 90 bp | TTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATaGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: LGVRPGSAHNCPWMS*ESGRGDYNSAFTDS Trigger: AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGTTTGGCCTGTCAGGGTaGGAGACTGTGAAAAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TALGVRPGSAHNCPWMSWFGLSG*ETVKSS Trigger: GGAGCTTTTCACAGTCTCCCACCCTGACAGGCCAAA...CCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGAGTCAGAGCTTTTACAGACTCTaGTGCCAGGAAGGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: WVSGRAQRITVLGCHGSQSFYRL*CQEGNR Trigger: CCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCT...CTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGTTTGGGGGCAGGAAATaGCAAACCTTTACATATCCT | + |
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Preference number: 2 (lower is better) Translates to: QPWVSGRAQRITVLGCHGFGGRK*QTFTYP Trigger: AGGATATGTAAAGGTTTGTCATTTCCTGCCCCCAAA...CCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGTCTCCAACAGCTTTaGGGGCTACATGGAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GRKQGEGSDNRLLSTRPFGLQQL*GLHGGR Trigger: TCTTCCTCCATGTAGCCCCCAAAGCTGTTGGAGACC...AAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGAGTCAGGAAGAGAGCTTTTACAGACTCTaGTGCCAGGAAGGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: SGRAQRITVLGCHGSQEESFYRL*CQEGNR Trigger: CCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCT...CTCTTCCTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCCTGGCTTGCCTTTCTTTTTaGGGGCAGGAAATGACAAAC | + |
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Preference number: 2 (lower is better) Translates to: KQGEGSDNRLLSTRPFGLACLSF*GQEMTN Trigger: GTTTGTCATTTCCTGCCCCCAAAAAGAAAGGCAAGC...CAGGCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGAGACCCTTTCTCACGGTATaGTCTCCAACAGCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GDYNSAFTDSGARKETGRPFLTV*SPTALG Trigger: CCCCAAAGCTGTTGGAGACCATACCGTGAGAAAGGG...TCTCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATGTCATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTGGTCTCCAACAGCTTTaGGGGCTACATGGAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: WMSWESGRGDYNSAFTDSGLQQL*GLHGGR Trigger: TCTTCCTCCATGTAGCCCCCAAAGCTGTTGGAGACC...AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATGTCATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTTTTGGCCTGTCAGGGTaGGAGACTGTGAAAAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: WMSWESGRGDYNSAFTDSFGLSG*ETVKSS Trigger: GGAGCTTTTCACAGTCTCCCACCCTGACAGGCCAAA...AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCTTAATTAACAATTaGAAACACCAGGACATACCA | + |
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Preference number: 2 (lower is better) Translates to: GRKQGEGSDNRLLSTRPFGLINN*KHQDIP Trigger: TGGTATGTCCTGGTGTTTTCAATTGTTAATTAAGCC...AAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCTTTGGGGGCTACATGGGCTTAATTAACAATTaGAAACACCAGGACATACCA | + |
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Preference number: 2 (lower is better) Translates to: VKSSLSHGMVSNSFGGYMGLINN*KHQDIP Trigger: TGGTATGTCCTGGTGTTTTCAATTGTTAATTAAGCC...CATGTAGCCCCCAAAGCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATGTCATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTGCTTGCCTTTCTTTTTaGGGGCAGGAAATGACAAAC | + |
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Preference number: 2 (lower is better) Translates to: WMSWESGRGDYNSAFTDSACLSF*GQEMTN Trigger: GTTTGTCATTTCCTGCCCCCAAAAAGAAAGGCAAGC...AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATGTCATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTTTTGGGGGCAGGAAATaGCAAACCTTTACATATCCT | + |
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Preference number: 2 (lower is better) Translates to: WMSWESGRGDYNSAFTDSFGGRK*QTFTYP Trigger: AGGATATGTAAAGGTTTGTCATTTCCTGCCCCCAAA...AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR TCA 72 bp | ATTAACAAAGAACAAAGAAGTGGGCATCAGGGGACATaGGGGCTGAAGTCAGGCGCCAGGTGGCGGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: INKEQRSGHQGT*GLKSGARWRAL Trigger: GAGTGCCCGCCACCTGGCGCCTGACTTCAGCCCTCATGTCCCCTGATGCCCACTTCTTTGTTCTTTGTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR CCA 72 bp | CTCACGGTATGGTCTCCAACAGCTTTGGGGGCTACATaGAGGAAGATCACCTTCCCCAAGGCAGCTTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: LTVWSPTALGAT*RKITFPKAACL Trigger: AAGGCAAGCTGCCTTGGGGAAGGTGATCTTCCTCCATGTAGCCCCCAAAGCTGTTGGAGACCATACCGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR CCA 72 bp | CGGCTCCTTAGCACAAGGCCATTTGGCCTGTCAGGGTaGGAGACTGTGAAAAGCTCCCTTTCTCACGGTATG | + |
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Preference number: 3 (lower is better) Translates to: RLLSTRPFGLSG*ETVKSSLSHGM Trigger: CATACCGTGAGAAAGGGAGCTTTTCACAGTCTCCCACCCTGACAGGCCAAATGGCCTTGTGCTAAGGAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCAGCTTGCCTTTCTTTTaGGGGGCAGGAAATGACAAA | + |
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Preference number: 3 (lower is better) Translates to: RKQGEGSDNRLLSTRPFGSLPFF*GAGNDK Trigger: TTTGTCATTTCCTGCCCCCAAAAAGAAAGGCAAGCT...GCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR CCA 72 bp | AGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATaGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: RPGSAHNCPWMS*ESGRGDYNSAF Trigger: AAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAAGCTTGCCTTTCTTTTaGGGGGCAGGAAATGACAAA | + |
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Preference number: 3 (lower is better) Translates to: HGSQEEGTIIQLLQTLVPSLPFF*GAGNDK Trigger: TTTGTCATTTCCTGCCCCCAAAAAGAAAGGCAAGCT...TGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | CAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGCAGGGCCATGAGCTCTaGCAGCTGCCCTTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QPWVSGRAQRITVLGCHGQGHEL*QLPLLL Trigger: GAGCAGCAAGGGCAGCTGGCAGAGCTCATGGCCCTG...CCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | AGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCGCCAGCTGCCCTTGCTaGTCCTCCCCAGAGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RKQGEGSDNRLLSTRPFGASCPC*SSPEAL Trigger: CAGGGCCTCTGGGGAGGAGCAGCAAGGGCAGCTGGC...GCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | TCCTTAACAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCTGCCAGCTGCCCTTaGTGCTCCTCCCCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLTALGVRPGSAHNCPWMSASCP*CSSPEA Trigger: GGCCTCTGGGGAGGAGCAGCAAGGGCAGCTGGCAGA...CATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTGTTAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | TCCTTAACAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCCTCACCAGGGCCATaGGCTCTGCCAGCTGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: SLTALGVRPGSAHNCPWMSSPGP*ALPAAL Trigger: AAGGGCAGCTGGCAGAGCTCATGGCCCTGGTGAGGA...CATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTGTTAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | AGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCTCTGCCAGCTGCCCTTaGTGCTCCTCCCCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RKQGEGSDNRLLSTRPFGSASCP*CSSPEA Trigger: GGCCTCTGGGGAGGAGCAGCAAGGGCAGCTGGCAGA...GCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | TGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGAGTCAGCCATGTGCCTGTCTCTaGCTGGCTGGTCCTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: WVSGRAQRITVLGCHGSQPCACL*LAGPCH Trigger: GTGACAAGGACCAGCCAGGCAGAGACAGGCACATGG...CTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | TCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGAGTCAGGAAGAGATGAGCTCTGCCAGCTaGCCTTGCTGCTCCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SGRAQRITVLGCHGSQEEMSSAS*PCCSSP Trigger: TGGGGAGGAGCAGCAAGGGCAGCTGGCAGAGCTCAT...CTCTTCCTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTAGCACAAGGCCATTTGGCCTGTCAGGGTGGGAGACTGTGAAAAGCTCCCAGGGCCATGAGCTCTaGCAGCTGCCCTTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLSTRPFGLSGWETVKSSQGHEL*QLPLLL Trigger: GAGCAGCAAGGGCAGCTGGCAGAGCTCATGGCCCTG...GGAGCTTTTCACAGTCTCCCACCCTGACAGGCCAAATGGCCTTGTGCTAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | TGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGAGTCAGCGATCATGTGCCTCATaGCCCCTACCCCAAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: WVSGRAQRITVLGCHGSQRSCAS*PLPQRP Trigger: AGGTCTTTGGGGTAGGGGTCATGAGGCACATGATCG...CTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | AGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCATGAGCTCTGCCAGCTaGCCTTGCTGCTCCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RKQGEGSDNRLLSTRPFGMSSAS*PCCSSP Trigger: TGGGGAGGAGCAGCAAGGGCAGCTGGCAGAGCTCAT...GCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | TCCTTAACAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGCTGTCTCTGCCTGGCTaGTCCTTGTCACAGACTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLTALGVRPGSAHNCPWMLSLPG*SLSQTG Trigger: GCCAGTCTGTGACAAGGACCAGCCAGGCAGAGACAG...CATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTGTTAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | AGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCTCACAGACTGGCCTCTaGGCCTGGACTCGAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: RKQGEGSDNRLLSTRPFGSQTGL*AWTRML Trigger: CAGCATTCGAGTCCAGGCTCAGAGGCCAGTCTGTGA...GCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | CAGCTTTGGGGGCTACATGGAGGAAGATCACCTTCCCCAAGGCAGCTTGCCTTTGGTCTTCCTTGCGGGTaGAGAGGACGATCATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: QLWGLHGGRSPSPRQLAFGLPCG*RGRSCA Trigger: GGCACATGATCGTCCTCTTCACCCGCAAGGAAGACC...AAAGGCAAGCTGCCTTGGGGAAGGTGATCTTCCTCCATGTAGCCCCCAAAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | GTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCTTTGGGGGCTACATGCTATGGGGAGGACCTTaGGGACCCAGCTGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VKSSLSHGMVSNSFGGYMLWGGP*GPSCPP Trigger: AGGAGGGCAGCTGGGTCCTCAAGGTCCTCCCCATAG...CATGTAGCCCCCAAAGCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | CATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGCCAGCTGCCCTTGCTaGTCCTCCCCAGAGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: HGSQEEGTIIQLLQTLVPASCPC*SSPEAL Trigger: CAGGGCCTCTGGGGAGGAGCAGCAAGGGCAGCTGGC...TGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | AACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCCTGTGTGCCTGTCTCTGCCTaGCTGGTCCTTGTCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: NREKGVTTGSLAQGHLACVPVSA*LVLVTD Trigger: GTCTGTGACAAGGACCAGCCAGGCAGAGACAGGCAC...ACAGGCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | GTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCTTTGGGGGCTACATGACTCCTGAACCAGGCTaGGCAGGCTGCGGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VKSSLSHGMVSNSFGGYMTPEPG*AGCGCQ Trigger: CTGACAACCGCAGCCTGCGCAGCCTGGTTCAGGAGT...CATGTAGCCCCCAAAGCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGTGGGAGACTGTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCGTGCCTGTCTCTGCCTaGCTGGTCCTTGTCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: SGWETVKSSLSHGMVSNSVPVSA*LVLVTD Trigger: GTCTGTGACAAGGACCAGCCAGGCAGAGACAGGCAC...GCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCACAGTCTCCCACCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | GGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGAGACTATGGGGAGGACCTTaGGGACCCAGCTGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GDYNSAFTDSGARKETGRLWGGP*GPSCPP Trigger: AGGAGGGCAGCTGGGTCCTCAAGGTCCTCCCCATAG...TCTCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| 3UTR CAA 72 bp | GTCTTATCTCCGGAACATAGATCCTCCTTAACAGCCTaGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLSPEHRSSLTA*GVRPGSAHNCP Trigger: AGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTGTTAAGGAGGATCTATGTTCCGGAGATAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | AACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCCTGTGAAGGAAGAGGTCATTaGTGTGGAAGGAGCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: NREKGVTTGSLAQGHLACEGRGH*CGRSLH Trigger: GTGAAGGCTCCTTCCACAGCAATGACCTCTTCCTTC...ACAGGCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGACAACACATGGGGGCCTaGGGCACACAGCAGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: EGTIIQLLQTLVPGRKQGQHMGA*GTQQVA Trigger: TGCTACCTGCTGTGTGCCCCAGGCCCCCATGTGTTG...TCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | CATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCACAACACATGGGGGCCTaGGGCACACAGCAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HGSQEEGTIIQLLQTLVPQHMGA*GTQQVA Trigger: TGCTACCTGCTGTGTGCCCCAGGCCCCCATGTGTTG...TGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | CATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAACCAGCAACAACACATaGGGGCCTGGGGCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGSQEEGTIIQLLQTLVPTSNNT*GPGAHS Trigger: GCTGTGTGCCCCAGGCCCCCATGTGTTGTTGCTGGT...TGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | AAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCCTGCTGCGGTTGTCAGTGTaGGTCACAAACTCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQGEGSDNRLLSTRPFGLLRLSV*VTNSSK Trigger: CTTGGAAGAGTTTGTGACCCACACTGACAACCGCAG...CAGGCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | GAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGACCATGTGCCTGTCTCTaGCTGGCTGGTCCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGTIIQLLQTLVPGRKQGPCACL*LAGPCH Trigger: GTGACAAGGACCAGCCAGGCAGAGACAGGCACATGG...TCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTCTGCGGTTGTCAGTGTaGGTCACAAACTCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRKQGEGSDNRLLSTRPFLRLSV*VTNSSK Trigger: CTTGGAAGAGTTTGTGACCCACACTGACAACCGCAG...AAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | GGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGAGACGATCATGTGCCTCATaGCCCCTACCCCAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GDYNSAFTDSGARKETGRRSCAS*PLPQRP Trigger: AGGTCTTTGGGGTAGGGGTCATGAGGCACATGATCG...TCTCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | AACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTGGCCTGTTCCATGTCTTGGTTCTaGGCCTTTGACTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NREKGVTTGSLAQGHLACSMSWF*AFDSKM Trigger: CATCTTTGAGTCAAAGGCCCAGAACCAAGACATGGA...ACAGGCCAAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | TGGATGTCATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTACCAGCAACAACACATaGGGGCCTGGGGCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WMSWESGRGDYNSAFTDSTSNNT*GPGAHS Trigger: GCTGTGTGCCCCAGGCCCCCATGTGTTGTTGCTGGT...AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR TCA 90 bp | TGGATGTCATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTTCACAGACTGGCCTCTaGGCCTGGACTCGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WMSWESGRGDYNSAFTDSSQTGL*AWTRML Trigger: CAGCATTCGAGTCCAGGCTCAGAGGCCAGTCTGTGA...AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | CATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCATTCCAAGGACTTCTCTaGCAGGTCTTCCTTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGSQEEGTIIQLLQTLVPFQGLL*QVFLAG Trigger: ACCCGCAAGGAAGACCTGGCAGAGAAGTCCTTGGAA...TGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | GAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGATTCCAAGGACTTCTCTaGCAGGTCTTCCTTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGTIIQLLQTLVPGRKQGFQGLL*QVFLAG Trigger: ACCCGCAAGGAAGACCTGGCAGAGAAGTCCTTGGAA...TCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CCA 90 bp | TGGATGTCATGGGAGTCAGGAAGAGGGGACTATAATTCAGCTTTTACAGACTCTCTGTCTCTGCCTGGCTaGTCCTTGTCACAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WMSWESGRGDYNSAFTDSLSLPG*SLSQTG Trigger: GCCAGTCTGTGACAAGGACCAGCCAGGCAGAGACAG...AGAGTCTGTAAAAGCTGAATTATAGTCCCCTCTTCCTGACTCCCATGACATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | CAGCTTTGGGGGCTACATGGAGGAAGATCACCTTCCCCAAGGCAGCTTGCCTTTCAACAAAAATCTGAATaGAACACCTCCAACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLWGLHGGRSPSPRQLAFQQKSE*NTSNFL Trigger: CAAAAAGTTGGAGGTGTTGCATTCAGATTTTTGTTG...AAAGGCAAGCTGCCTTGGGGAAGGTGATCTTCCTCCATGTAGCCCCCAAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR GCA 90 bp | GGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGAGACAACAAAAATCTGAATaGAACACCTCCAACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDYNSAFTDSGARKETGRQQKSE*NTSNFL Trigger: CAAAAAGTTGGAGGTGTTGCATTCAGATTTTTGTTG...TCTCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | ACAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGCTCTGCCAGCTGCCCTaGCTGCTCCTCCCCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TALGVRPGSAHNCPWMSWLCQLP*LLLPRG Trigger: GCCTCTGGGGAGGAGCAGCAAGGGCAGCTGGCAGAG...CCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | CAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGTCTGCCAGGTCTTCCTaGCGGGTGAAGAGGACGATC | + |
|
Preference number: 5 (lower is better) Translates to: QPWVSGRAQRITVLGCHGSARSS*RVKRTI Trigger: GATCGTCCTCTTCACCCGCAAGGAAGACCTGGCAGA...CCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | TGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGGAGTCAGCTGCGCAGGCTGCGGTaGTCAGTGTGGGTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WVSGRAQRITVLGCHGSQLRRLR*SVWVTN Trigger: GTTTGTGACCCACACTGACAACCGCAGCCTGCGCAG...CTGACTCCCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | CTCCTTAGCACAAGGCCATTTGGCCTGTCAGGGTGGGAGACTGTGAAAAGCTCCGGATCCTCAGTGGCCTaGACCCTGAGGTGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSTRPFGLSGWETVKSSGSSVA*TLRCSH Trigger: GTGGCTGCACCTCAGGGTCAAGGCCACTGAGGATCC...GGAGCTTTTCACAGTCTCCCACCCTGACAGGCCAAATGGCCTTGTGCTAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | ACAGCCTTGGGTGTCAGGCCGGGCTCAGCGCATAACTGTCCTTGGATGTCATGGTTACCGCAGCCAGATTaGCCCACCAGGAGGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TALGVRPGSAHNCPWMSWLPQPD*PTRRIL Trigger: GAGGATCCTCCTGGTGGGCAAATCTGGCTGCGGTAA...CCATGACATCCAAGGACAGTTATGCGCTGAGCCCGGCCTGACACCCAAGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | TCAGGGTGGGAGACTGTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCCCTATGGGGAGGACCTaGAGGACCCAGCTGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGWETVKSSLSHGMVSNSPMGRT*RTQLPS Trigger: GGAGGGCAGCTGGGTCCTCAAGGTCCTCCCCATAGG...GCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCACAGTCTCCCACCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | GACTGTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCTTTGGGGGCTACCTATGGGGAGGACCTaGAGGACCCAGCTGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DCEKLPFSRYGLQQLWGLPMGRT*RTQLPS Trigger: GGAGGGCAGCTGGGTCCTCAAGGTCCTCCCCATAGG...TAGCCCCCAAAGCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCACAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | GACTGTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCTTTGGGGGCTAGGATCCTCAGTGGCCTaGACCCTGAGGTGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DCEKLPFSRYGLQQLWGLGSSVA*TLRCSH Trigger: GTGGCTGCACCTCAGGGTCAAGGCCACTGAGGATCC...TAGCCCCCAAAGCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCACAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGACTATAATTCAGCTTTTACAGACTCTGGTGCCAGGAAGGAAACAGGGACTCTGCCAGCTGCCCTaGCTGCTCCTCCCCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGTIIQLLQTLVPGRKQGLCQLP*LLLPRG Trigger: GCCTCTGGGGAGGAGCAGCAAGGGCAGCTGGCAGAG...TCCCTGTTTCCTTCCTGGCACCAGAGTCTGTAAAAGCTGAATTATAGTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | GGAAGGAAACAGGGAGAAGGGAGTGACAACCGGCTCCTTAGCACAAGGCCATTTTTACCGCAGCCAGATTaGCCCACCAGGAGGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRKQGEGSDNRLLSTRPFLPQPD*PTRRIL Trigger: GAGGATCCTCCTGGTGGGCAAATCTGGCTGCGGTAA...AAATGGCCTTGTGCTAAGGAGCCGGTTGTCACTCCCTTCTCCCTGTTTCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS-3UTR CAA 90 bp | GACTGTGAAAAGCTCCCTTTCTCACGGTATGGTCTCCAACAGCTTTGGGGGCTACTGCGCAGGCTGCGGTaGTCAGTGTGGGTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DCEKLPFSRYGLQQLWGLLRRLR*SVWVTN Trigger: GTTTGTGACCCACACTGACAACCGCAGCCTGCGCAG...TAGCCCCCAAAGCTGTTGGAGACCATACCGTGAGAAAGGGAGCTTTTCACAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS TCA 72 bp | TCTCTGCCTGGCTGGTCCTTGTCACAGACTGGCCTCTaGGCCTGGACTCGAATGCTGGTCGTCGGAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLPGWSLSQTGL*AWTRMLVVGGG Trigger: GCCTCCTCCGACGACCAGCATTCGAGTCCAGGCTCAGAGGCCAGTCTGTGACAAGGACCAGCCAGGCAGAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS GCA 72 bp | ACCTCCTCCCACACTCCTGAACCAGGCTGCGCAGGCTaGGGTTGTCAGTGTGGGTCACAAACTCTTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSHTPEPGCAG*GCQCGSQTLPR Trigger: CCTTGGAAGAGTTTGTGACCCACACTGACAACCGCAGCCTGCGCAGCCTGGTTCAGGAGTGTGGGAGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS CCA 72 bp | TGTCACAGACTGGCCTCTGAGCCTGGACTCGAATGCTaGTCGTCGGAGGAGGCTGTTCCCTGTGGCGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CHRLASEPGLEC*SSEEAVPCGAF Trigger: AAAAGCGCCACAGGGAACAGCCTCCTCCGACGACCAGCATTCGAGTCCAGGCTCAGAGGCCAGTCTGTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS CCA 72 bp | GCTCCCACCTCTGTTTCTCCACCTCCTGCCTCACCTTaGCCAGGTAGCACCTATAGGCTTCCTGGTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: APTSVSPPPASP*PGSTYRLPGAH Trigger: GTGTGCACCAGGAAGCCTATAGGTGCTACCTGGCCAAGGTGAGGCAGGAGGTGGAGAAACAGAGGTGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS CAA 72 bp | AGCCAGATTTGCCCACCAGGAGGATCCTCAGTGGCCTaGACCCTGAGGTGCAGCCACCTTTCTTTCCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQICPPGGSSVA*TLRCSHLSFRL Trigger: CAGGCGGAAAGAAAGGTGGCTGCACCTCAGGGTCAAGGCCACTGAGGATCCTCCTGGTGGGCAAATCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS GCA 72 bp | GTGTGTCTACCACTAGGATGCTCCTCCCCTCCCATGTaGCTGTCTCTGCCTGGCTGGTCCTTGTCACAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VCLPLGCSSPPM*LSLPGWSLSQT Trigger: AGTCTGTGACAAGGACCAGCCAGGCAGAGACAGGCACATGGGAGGGGAGGAGCATCCTAGTGGTAGACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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| CDS CAA 72 bp | ACAAACTCTTCCAAGGACTTCTCTGCCAGGTCTTCCTaGCGGGTGAAGAGGACGATCATGTGCCTCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: TNSSKDFSARSS*RVKRTIMCLMT Trigger: GGTCATGAGGCACATGATCGTCCTCTTCACCCGCAAGGAAGACCTGGCAGAGAAGTCCTTGGAAGAGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038811.10 ENSMUST00000204036.2 |
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