Pregenerated sensors for GIMAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090019Ensembl transcript IDs: ENSMUST00000054368.7, ENSMUST00000140054.3, ENSMUST00000204168.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAAAATGGATTCACCAGTATCCTGGTGCACCTGTGCAGCTCTCATaGTGTTTGTGGCTTATATTCAGGTGTATGAGGAAGTCAGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: SKWIHQYPGAPVQLS*CLWLIFRCMRKSGA Trigger: TGCACCTGACTTCCTCATACACCTGAATATAAGCCACAAACATCATGAGAGCTGCACAGGTGCACCAGGATACTGGTGAATCCATTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| 3UTR CCA 90 bp | TATTCAGTCTTCATCTTTCTTCTTGTTTATATCTCCCCCGAACCCTaGGCCTCTCACTCTTATATACTCTCAGTTCCCATCCACCCACAG | + |
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Preference number: 1 (lower is better) Translates to: YSVFIFLLVYISPEP*ASHSYILSVPIHPQ Trigger: CTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAAGAAGAAAGATGAAGACTGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| 3UTR-3UTR CCA 90 bp | CTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGGGATTCACCAGTATCCTaGTGCACCTGTGCAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LIYSQFPSTHSRPRHLTRDSPVS*CTCAAL Trigger: GAGAGCTGCACAGGTGCACCAGGATACTGGTGAATC...CCTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGATATCTCCATCAAAATaGATTCACCAGTATCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SYILSVPIHPQQATPPHQISPSK*IHQYPG Trigger: ACCAGGATACTGGTGAATCCATTTTGATGGAGATAT...CTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| 3UTR TCA 72 bp | ATTCACCAGTATCCTGGTGCACCTGTGCAGCTCTCATaGTGTTTGTGGCTTATATTCAGGTGTATGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: IHQYPGAPVQLS*CLWLIFRCMRK Trigger: CTTCCTCATACACCTGAATATAAGCCACAAACATCATGAGAGCTGCACAGGTGCACCAGGATACTGGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| 3UTR TCA 72 bp | AGCTCTCATGATGTTTGTGGCTTATATTCAGGTGTATaGGGAAGTCAGGTGCAAGCCATAAGACTTAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SSHDVCGLYSGV*GSQVQAIRLSC Trigger: GCAGCTAAGTCTTATGGCTTGCACCTGACTTCCTCATACACCTGAATATAAGCCACAAACATCATGAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| 3UTR GCA 72 bp | CATCAAAATGGATTCACCAGTATCCTGGTGCACCTGTaGAGCTCTCATGATGTTTGTGGCTTATATTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: HQNGFTSILVHL*SSHDVCGLYSG Trigger: ACCTGAATATAAGCCACAAACATCATGAGAGCTGCACAGGTGCACCAGGATACTGGTGAATCCATTTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| 3UTR GCA 72 bp | CATATCTCCATCAAAATGGATTCACCAGTATCCTGGTaGACCTGTGCAGCTCTCATGATGTTTGTGGCTTAT | + |
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Preference number: 3 (lower is better) Translates to: HISIKMDSPVSW*TCAALMMFVAY Trigger: ATAAGCCACAAACATCATGAGAGCTGCACAGGTGCACCAGGATACTGGTGAATCCATTTTGATGGAGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CGCCACCTCACCAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTACCAGCAGCAGCGCGTaGGGCCCAGGGGCCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: RHLTRHAASANQGSRGISTSSSA*GPGADS Trigger: GCTGTCGGCCCCTGGGCCGCACGCGCTGCTGCTGGT...AGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGGACCAGCAGCAGCGCGTaGGGCCCAGGGGCCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LIYSQFPSTHSRPRHLTRTSSSA*GPGADS Trigger: GCTGTCGGCCCCTGGGCCGCACGCGCTGCTGCTGGT...CCTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR TCA 90 bp | AGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATGGAGCGACCCAGCTGGGTaGCCAGCAGCAGCGCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: RHAASANQGSRGISPSKWSDPAG*PAAARA Trigger: CGCACGCGCTGCTGCTGGTCACCCAGCTGGGTCGCT...CCATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CGCCACCTCACCAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCAAGCACGCAACCATaGCCAGCAGCTGCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RHLTRHAASANQGSRGISPSTQP*PAAAQP Trigger: AGGCTGAGCAGCTGCTGGGCATGGTTGCGTGCTTGG...AGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | CTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGGGCATCTGCGGGGCCCTaGAGTCCTCTGAGCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: LIYSQFPSTHSRPRHLTRASAGP*SPLSHR Trigger: CCTATGGCTCAGAGGACTCCAGGGCCCCGCAGATGC...CCTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | CCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCCCATCCACCCACAGAGGATGAGCCTCAGCTaGGGCATCTGCGGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PEPWASHSYILSVPIHPQRMSLS*GICGAL Trigger: CAGGGCCCCGCAGATGCCCCAGCTGAGGCTCATCCT...CTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | TATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGGCAGCCACCTTGGCTACTTaGTCCTGGGGGTCAGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: YILSVPIHPQQATPPHQAATLAT*SWGSAH Trigger: GTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGC...TGCCTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | TCACTCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACTCAGCTGGGGCATCTaGGGGGCCCTGGAGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLLYTLSSHPPTAGHATSLSWGI*GALESS Trigger: AGAGGACTCCAGGGCCCCGCAGATGCCCCAGCTGAG...TGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATCTCAGCTGGGGCATCTaGGGGGCCCTGGAGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGTQLQLIRAAGAYLHQNLSWGI*GALESS Trigger: AGAGGACTCCAGGGCCCCGCAGATGCCCCAGCTGAG...ATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGGGACCCAGGATGCTGTTaGCAGTGGCACTCTTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LIYSQFPSTHSRPRHLTRDPGCC*QWHSCR Trigger: CCGGCAAGAGTGCCACTGGCAACAGCATCCTGGGTC...CCTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | TCACTCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCAGTGAAGCGACCCAGCTaGGTGACCAGCAGCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: SLLYTLSSHPPTAGHATSVKRPS*VTSSSA Trigger: CGCGCTGCTGCTGGTCACCCAGCTGGGTCGCTTCAC...TGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR TCA 90 bp | CCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCCCATCCACCCACAGTCCTGCCCACTAGGATaGGCCTCAGCTGGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: PEPWASHSYILSVPIHPQSCPLG*ASAGAS Trigger: AGATGCCCCAGCTGAGGCTCATCCTAGTGGGCAGGA...CTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR TCA 90 bp | TCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGTCCTGCCCACTAGGATaGGCCTCAGCTGGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SYILSVPIHPQQATPPHQSCPLG*ASAGAS Trigger: AGATGCCCCAGCTGAGGCTCATCCTAGTGGGCAGGA...CTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | TCACTCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCATCCACCACCTCCACCTaGCAGCCGGCCCACATTCTG | + |
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Preference number: 4 (lower is better) Translates to: SLLYTLSSHPPTAGHATSSTTST*QPAHIL Trigger: CAGAATGTGGGCCGGCTGGCAGGTGGAGGTGGTGGA...TGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CGCCACCTCACCAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCTCAGCCACTATCTCTaGCACCTTGGCTACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RHLTRHAASANQGSRGISLSHYL*HLGYLV Trigger: GACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAG...AGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | TCACTCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAAGCACGCAACCATaGCCAGCAGCTGCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLLYTLSSHPPTAGHATSPSTQP*PAAAQP Trigger: AGGCTGAGCAGCTGCTGGGCATGGTTGCGTGCTTGG...TGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATCCAGCCAGGTCCTCTTaGCGCGTGAACACCACGACA | + |
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Preference number: 4 (lower is better) Translates to: PGTQLQLIRAAGAYLHQNPARSS*RVNTTT Trigger: TGTCGTGGTGTTCACGCGCCAAGAGGACCTGGCTGG...ATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | AGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATGGTGGTGCGCCTCTGCATaGGCTCAGCCACTATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RHAASANQGSRGISPSKWWCASA*AQPLSL Trigger: CAGAGATAGTGGCTGAGCGCATGCAGAGGCGCACCA...CCATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | AGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATGGGCTCATACACCTCATTaGAGTAGTGCGCGCCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: RHAASANQGSRGISPSKWAHTPH*SSARPR Trigger: ACGGGGGCGCGCACTACTCCAATGAGGTGTATGAGC...CCATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | TATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCCCATCGCCACCTTGGCTACTTaGTCCTGGGGGTCAGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: YISPEPWASHSYILSVPIATLAT*SWGSAH Trigger: GTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGC...GATGGGAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR TCA 90 bp | CCAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATGACAGGAAGCACTTCTaGCCCAGGATGCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PGTQLQLIRAAGAYLHQNDRKHF*PRMLLP Trigger: TGGCAACAGCATCCTGGGTCAGAAGTGCTTCCTGTC...ATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | TCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGACTTCTGACCCAGGATaGTGTTGCCAGTGGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: SYILSVPIHPQQATPPHQTSDPG*CCQWHS Trigger: AGAGTGCCACTGGCAACAGCATCCTGGGTCAGAAGT...CTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CTTCTTGTTTATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCATCCACCACCTCCACCTaGCAGCCGGCCCACATTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLVYISPEPWASHSYILSSTTST*QPAHIL Trigger: CAGAATGTGGGCCGGCTGGCAGGTGGAGGTGGTGGA...TGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCGCATCTGCGGGGCCCTaGAGTCCTCTGAGCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: LFISPPNPGPLTLIYSQFASAGP*SPLSHR Trigger: CCTATGGCTCAGAGGACTCCAGGGCCCCGCAGATGC...GAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | TTCTTCTTGTTTATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTAGGATGAGCCTCAGCTaGGGCATCTGCGGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FFLFISPPNPGPLTLIYSRMSLS*GICGAL Trigger: CAGGGCCCCGCAGATGCCCCAGCTGAGGCTCATCCT...AGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAAGAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATGGATTCACGACAGGAAGCACTTCTaGCCCAGGATGCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: AASANQGSRGISPSKWIHDRKHF*PRMLLP Trigger: TGGCAACAGCATCCTGGGTCAGAAGTGCTTCCTGTC...GTGAATCCATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCGACCCAGGATGCTGTTaGCAGTGGCACTCTTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LFISPPNPGPLTLIYSQFDPGCC*QWHSCR Trigger: CCGGCAAGAGTGCCACTGGCAACAGCATCCTGGGTC...GAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTTCAGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAAATGGATTCACCTATCTCTGCCACCTTaGCTACTTGGTCCTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AASANQGSRGISPSKWIHLSLPP*LLGPGG Trigger: ACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAG...GTGAATCCATTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CTTCTTGTTTATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCATGGTGCGCCTCTGCATaGGCTCAGCCACTATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLVYISPEPWASHSYILSWCASA*AQPLSL Trigger: CAGAGATAGTGGCTGAGCGCATGCAGAGGCGCACCA...TGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCACCTGTGCAGCTCTCATGATGTTTGTGGCTTATATTCAGGTGTATGAGGCTCATACACCTCATTaGAGTAGTGCGCGCCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: WCTCAALMMFVAYIQVYEAHTPH*SSARPR Trigger: ACGGGGGCGCGCACTACTCCAATGAGGTGTATGAGC...CTCATACACCTGAATATAAGCCACAAACATCATGAGAGCTGCACAGGTGCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CCA 90 bp | CTTCTTGTTTATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCACTATCTCTGCCACCTTaGCTACTTGGTCCTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLVYISPEPWASHSYILSLSLPP*LLGPGG Trigger: ACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAG...TGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR GCA 90 bp | CTTGTTTATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCTCAGCCACTATCTCTaGCACCTTGGCTACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LVYISPEPWASHSYILSVLSHYL*HLGYLV Trigger: GACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAG...AACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS TCA 90 bp | GCTGCTCAGCCTGAGCCTCGCGCTCGCTGCCTGTGGCGCGGTTGTTaGGGGCGCACACGCGGCCCCCGCACTCGGCCACCAGGTCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: AAQPEPRARCLWRGC*GRTRGPRTRPPGPA Trigger: TGCGGGACCTGGTGGCCGAGTGCGGGGGCCGCGTGTGCGCCCTCAACAACCGCGCCACAGGCAGCGAGCGCGAGGCTCAGGCTGAGCAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 90 bp | ACCGCGGCCAGCGCCTGGCTGTCCTGCATGGTGAAGCGACCCAGCTaGGTGACCAGCAGCAGCGCGTGCGGCCCAGGGGCCGACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: TAASAWLSCMVKRPS*VTSSSACGPGADST Trigger: TGTGCTGTCGGCCCCTGGGCCGCACGCGCTGCTGCTGGTCACCCAGCTGGGTCGCTTCACCATGCAGGACAGCCAGGCGCTGGCCGCGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS TCA 90 bp | GGGCTGTCTCCACGCACCCAGGGTCGGTCCGCGGGATCTCGGAGCTaGAGATATCCGGGGTGTCCACCACCTCCACCTGCCAGCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: GLSPRTQGRSAGSRS*RYPGCPPPPPASRP Trigger: GGGCCGGCTGGCAGGTGGAGGTGGTGGACACCCCGGATATCTTCAGCTCCGAGATCCCGCGGACCGACCCTGGGTGCGTGGAGACAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 90 bp | TGGAGTAGTGCGCGCCCCCGTGCTCCCTCACCAAGCACGCAACCATaGCCAGCAGCTGCTCAGCCTGAGCCTCGCGCTCGCTGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: WSSARPRAPSPSTQP*PAAAQPEPRARCLW Trigger: CCACAGGCAGCGAGCGCGAGGCTCAGGCTGAGCAGCTGCTGGGCATGGTTGCGTGCTTGGTGAGGGAGCACGGGGGCGCGCACTACTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS TCA 90 bp | TGCTCCCTCACCAAGCACGCAACCATGCCCAGCAGCTGCTCAGCCTaGGCCTCGCGCTCGCTGCCTGTGGCGCGGTTGTTGAGGGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: CSLTKHATMPSSCSA*ASRSLPVARLLRAH Trigger: GTGCGCCCTCAACAACCGCGCCACAGGCAGCGAGCGCGAGGCTCAGGCTGAGCAGCTGCTGGGCATGGTTGCGTGCTTGGTGAGGGAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 90 bp | GGGGGTCAGCGCACCGCGTGTCCTGCACCAGCTCATACACCTCATTaGAGTAGTGCGCGCCCCCGTGCTCCCTCACCAAGCACGCAACCA | + |
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Preference number: 5 (lower is better) Translates to: GGQRTACPAPAHTPH*SSARPRAPSPSTQP Trigger: TGGTTGCGTGCTTGGTGAGGGAGCACGGGGGCGCGCACTACTCCAATGAGGTGTATGAGCTGGTGCAGGACACGCGGTGCGCTGACCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 90 bp | GCACTCTTGCCGGTCCCAGTCCTGCCCACTAGGATGAGCCTCAGCTaGGGCATCTGCGGGGCCCTGGAGTCCTCTGAGCCTGAGGATCAG | + |
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Preference number: 5 (lower is better) Translates to: ALLPVPVLPTRMSLS*GICGALESSEPEDQ Trigger: CTGATCCTCAGGCTCAGAGGACTCCAGGGCCCCGCAGATGCCCCAGCTGAGGCTCATCCTAGTGGGCAGGACTGGGACCGGCAAGAGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS GCA 90 bp | TCCGCCATCCCCACAGCCCAGCTAGCAACCTGGTGCGCCTCTGCATaGGCTCAGCCACTATCTCTGCCACCTTGGCTACTTGGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAIPTAQLATWCASA*AQPLSLPPWLLGPG Trigger: CCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCGCACCAGGTTGCTAGCTGGGCTGTGGGGATGGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 90 bp | CGCCTCTGCATGCGCTCAGCCACTATCTCTGCCACCTTGGCTACTTaGTCCTGGGGGTCAGCGCACCGCGTGTCCTGCACCAGCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: RLCMRSATISATLAT*SWGSAHRVSCTSSY Trigger: GTATGAGCTGGTGCAGGACACGCGGTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 90 bp | TGCATGCGCTCAGCCACTATCTCTGCCACCTTGGCTACTTGGTCCTaGGGGTCAGCGCACCGCGTGTCCTGCACCAGCTCATACACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CMRSATISATLATWS*GSAHRVSCTSSYTS Trigger: TGAGGTGTATGAGCTGGTGCAGGACACGCGGTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 90 bp | AATTTCCGCCATCCCCACAGCCCAGCTAGCAACCTGGTGCGCCTCTaGATGCGCTCAGCCACTATCTCTGCCACCTTGGCTACTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: NFRHPHSPASNLVRL*MRSATISATLATWS Trigger: GGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCGCACCAGGTTGCTAGCTGGGCTGTGGGGATGGCGGAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CAA 90 bp | CCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCCCATCCACCCACAGTCCAGCCAGGTCCTCTaGGCGCGTGAACACCACGAC | + |
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Preference number: 5 (lower is better) Translates to: PEPWASHSYILSVPIHPQSSQVL*AREHHD Trigger: GTCGTGGTGTTCACGCGCCAAGAGGACCTGGCTGGA...CTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CAA 90 bp | TCACTCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCATCCAGCCAGGTCCTCTaGGCGCGTGAACACCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLYTLSSHPPTAGHATSSSQVL*AREHHD Trigger: GTCGTGGTGTTCACGCGCCAAGAGGACCTGGCTGGA...TGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CAA 90 bp | TCTCACTCTTATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTTGCCACCTTGGCTACTaGGTCCTGGGGGTCAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHSYILSVPIHPQQATPPCHLGY*VLGVSA Trigger: TGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCA...AGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATAAGAGTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS-3UTR CAA 90 bp | TATATACTCTCAGTTCCCATCCACCCACAGCAGGCCACGCCACCTCACCAGGCAACTATCTCTGCCACCTaGGCTACTTGGTCCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YILSVPIHPQQATPPHQATISAT*ATWSWG Trigger: CCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGT...TGCCTGGTGAGGTGGCGTGGCCTGCTGTGGGTGGATGGGAACTGAGAGTATATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 90 bp | AGGACCCACATTGCCTGTTCTCCTTGGAAGCCTGGTGCTCCCATCTaGTTTGGGTTCTCTGAGCTCAGGTTCTTCCCCGTCTCTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTHIACSPWKPGAPI*FGFSELRFFPVSPF Trigger: GAAAGGAGAGACGGGGAAGAACCTGAGCTCAGAGAACCCAAAGCAGATGGGAGCACCAGGCTTCCAAGGAGAACAGGCAATGTGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS-3UTR CAA 90 bp | TATATCTCCCCCGAACCCTGGGCCTCTCACTCTTATATACTCTCAGTTCCCATCTGCCACCTTGGCTACTaGGTCCTGGGGGTCAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YISPEPWASHSYILSVPICHLGY*VLGVSA Trigger: TGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCA...GATGGGAACTGAGAGTATATAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS TCA 90 bp | GGGGCCCTGGAGTCCTCTGAGCCTGAGGATCAGATGTGGCAGCATTaGGTCAGAGACACAGGCTTTCCTCTGGGAAAGACTTGTATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GALESSEPEDQMWQH*VRDTGFPLGKTCIQ Trigger: TTGAATACAAGTCTTTCCCAGAGGAAAGCCTGTGTCTCTGACTCAATGCTGCCACATCTGATCCTCAGGCTCAGAGGACTCCAGGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS GCA 90 bp | CCCCGTCTCTCCTTTCTGCATTTGGATTCTCTGTGCACCTGCAGATaGTCCTGCATAGGCGTCTTCCTCATCTCTTGCCATCTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRLSFLHLDSLCTCR*SCIGVFLISCHLPS Trigger: GGAAGGAAGATGGCAAGAGATGAGGAAGACGCCTATGCAGGAGCATCTGCAGGTGCACAGAGAATCCAAATGCAGAAAGGAGAGACGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS GCA 90 bp | GTTCTTCCCCGTCTCTCCTTTCTGCATTTGGATTCTCTGTGCACCTaGAGATGCTCCTGCATAGGCGTCTTCCTCATCTCTTGCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLPRLSFLHLDSLCT*RCSCIGVFLISCHL Trigger: AAGATGGCAAGAGATGAGGAAGACGCCTATGCAGGAGCATCTGCAGGTGCACAGAGAATCCAAATGCAGAAAGGAGAGACGGGGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS TCA 72 bp | CCTGAGCCTCGCGCTCGCTGCCTGTGGCGCGGTTGTTaGGGGCGCACACGCGGCCCCCGCACTCGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PEPRARCLWRGC*GRTRGPRTRPP Trigger: TGGTGGCCGAGTGCGGGGGCCGCGTGTGCGCCCTCAACAACCGCGCCACAGGCAGCGAGCGCGAGGCTCAGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS TCA 72 bp | CCACGCACCCAGGGTCGGTCCGCGGGATCTCGGAGCTaGAGATATCCGGGGTGTCCACCACCTCCACCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRTQGRSAGSRS*RYPGCPPPPPA Trigger: GGCAGGTGGAGGTGGTGGACACCCCGGATATCTTCAGCTCCGAGATCCCGCGGACCGACCCTGGGTGCGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 72 bp | CCGGTCCCAGTCCTGCCCACTAGGATGAGCCTCAGCTaGGGCATCTGCGGGGCCCTGGAGTCCTCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PVPVLPTRMSLS*GICGALESSEP Trigger: TGGCTCAGAGGACTCCAGGGCCCCGCAGATGCCCCAGCTGAGGCTCATCCTAGTGGGCAGGACTGGGACCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 72 bp | CCGGTCCCAGTCCTGCCCACTAGGATGAGCCTCAGCTaGGGCATCTGCGGGGCCCTGGAGTCCTCTGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVPVLPTRMSLS*GICGALESSEP Trigger: AGGCTCAGAGGACTCCAGGGCCCCGCAGATGCCCCAGCTGAGGCTCATCCTAGTGGGCAGGACTGGGACCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS TCA 72 bp | CCTGCAGGGAGTCTCCAGCCAGGTCCTCTTGGCGCGTaGACACCACGACAGTGCGCGCCATCACCTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAGSLQPGPLGA*TPRQCAPSPAS Trigger: GGAAGCAGGTGATGGCGCGCACTGTCGTGGTGTTCACGCGCCAAGAGGACCTGGCTGGAGACTCCCTGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 72 bp | ACTCGGCCACCAGGTCCCGCAGCGCGCGGTTGTCCGTaGAGTGCACATAATCCTGCAGGGAGTCTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TRPPGPAARGCP*SAHNPAGSLQP Trigger: TGGCTGGAGACTCCCTGCAGGATTATGTGCACTGCACGGACAACCGCGCGCTGCGGGACCTGGTGGCCGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 72 bp | GTCCTGCCCACTAGGATGAGCCTCAGCTGGGGCATCTaGGGGGCCCTGGAGTCCTCTGAGCCTGAGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLPTRMSLSWGI*GALESSEPEDQ Trigger: CTGATCCTCAGGCTCAGAGGACTCCAGGGCCCCGCAGATGCCCCAGCTGAGGCTCATCCTAGTGGGCAGGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS CCA 72 bp | CGCACCGCGTGTCCTGCACCAGCTCATACACCTCATTaGAGTAGTGCGCGCCCCCGTGCTCCCTCACCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTACPAPAHTPH*SSARPRAPSPS Trigger: GCTTGGTGAGGGAGCACGGGGGCGCGCACTACTCCAATGAGGTGTATGAGCTGGTGCAGGACACGCGGTGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CAA 72 bp | CGCCTCTGCATGCGCTCAGCCACTATCTCTGCCACCTaGGCTACTTGGTCCTGGGGGTCAGCGCACCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLCMRSATISAT*ATWSWGSAHRV Trigger: CACGCGGTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 72 bp | CCTGGTGCGCCTCTGCATGCGCTCAGCCACTATCTCTaGCACCTTGGCTACTTGGTCCTGGGGGTCAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGAPLHALSHYL*HLGYLVLGVSA Trigger: TGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCGCACCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 72 bp | ATGCGCTCAGCCACTATCTCTGCCACCTTGGCTACTTaGTCCTGGGGGTCAGCGCACCGCGTGTCCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: MRSATISATLAT*SWGSAHRVSCT Trigger: GGTGCAGGACACGCGGTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CAA 72 bp | CATGCGCTCAGCCACTATCTCTGCCACCTTGGCTACTaGGTCCTGGGGGTCAGCGCACCGCGTGTCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HALSHYLCHLGY*VLGVSAPRVLH Trigger: GTGCAGGACACGCGGTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CAA 90 bp | GCGCCTCTGCATGCGCTCAGCCACTATCTCTGCCACCTTGGCTACTaGGTCCTGGGGGTCAGCGCACCGCGTGTCCTGCACCAGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: APLHALSHYLCHLGY*VLGVSAPRVLHQLI Trigger: TATGAGCTGGTGCAGGACACGCGGTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CCA 72 bp | TCAGCCACTATCTCTGCCACCTTGGCTACTTGGTCCTaGGGGTCAGCGCACCGCGTGTCCTGCACCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SATISATLATWS*GSAHRVSCTSS Trigger: TGAGCTGGTGCAGGACACGCGGTGCGCTGACCCCCAGGACCAAGTAGCCAAGGTGGCAGAGATAGTGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 72 bp | CCCACAGCCCAGCTAGCAACCTGGTGCGCCTCTGCATaGGCTCAGCCACTATCTCTGCCACCTTGGCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: PTAQLATWCASA*AQPLSLPPWLL Trigger: AAGTAGCCAAGGTGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCGCACCAGGTTGCTAGCTGGGCTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 72 bp | ATTTCCGCCATCCCCACAGCCCAGCTAGCAACCTGGTaGGCCTCTGCATGCGCTCAGCCACTATCTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ISAIPTAQLATW*ASACAQPLSLP Trigger: TGGCAGAGATAGTGGCTGAGCGCATGCAGAGGCGCACCAGGTTGCTAGCTGGGCTGTGGGGATGGCGGAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS CAA 90 bp | CCCACATTGCCTGTTCTCCTTGGAAGCCTGGTGCTCCCATCTGCTTaGGGTTCTCTGAGCTCAGGTTCTTCCCCGTCTCTCCTTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTLPVLLGSLVLPSA*GSLSSGSSPSLLSA Trigger: TGCAGAAAGGAGAGACGGGGAAGAACCTGAGCTCAGAGAACCCAAAGCAGATGGGAGCACCAGGCTTCCAAGGAGAACAGGCAATGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS TCA 72 bp | GAGTCCTCTGAGCCTGAGGATCAGATGTGGCAGCATTaGGTCAGAGACACAGGCTTTCCTCTGGGAAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: ESSEPEDQMWQH*VRDTGFPLGKT Trigger: AGTCTTTCCCAGAGGAAAGCCTGTGTCTCTGACTCAATGCTGCCACATCTGATCCTCAGGCTCAGAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS CCA 72 bp | CAAAGCCCTTTCTGTAGAACAGCAGGTAGATCAAGATaGCCACACCCAGGAAGACAGAGAAACCACGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSPFCRTAGRSR*PHPGRQRNHAS Trigger: GGAGGCGTGGTTTCTCTGTCTTCCTGGGTGTGGCCATCTTGATCTACCTGCTGTTCTACAGAAAGGGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054368.7 ENSMUST00000204168.2 |
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| CDS GCA 72 bp | CGTCTCTCCTTTCTGCATTTGGATTCTCTGTGCACCTaGAGATGCTCCTGCATAGGCGTCTTCCTCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLSFLHLDSLCT*RCSCIGVFLIS Trigger: AGAGATGAGGAAGACGCCTATGCAGGAGCATCTGCAGGTGCACAGAGAATCCAAATGCAGAAAGGAGAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS GCA 72 bp | TTCTCTGAGCTCAGGTTCTTCCCCGTCTCTCCTTTCTaGATTTGGATTCTCTGTGCACCTGCAGATGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FSELRFFPVSPF*IWILCAPADAP Trigger: AGGAGCATCTGCAGGTGCACAGAGAATCCAAATGCAGAAAGGAGAGACGGGGAAGAACCTGAGCTCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS GCA 72 bp | TCCTTTCTGCATTTGGATTCTCTGTGCACCTGCAGATaGTCCTGCATAGGCGTCTTCCTCATCTCTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SFLHLDSLCTCR*SCIGVFLISCH Trigger: ATGGCAAGAGATGAGGAAGACGCCTATGCAGGAGCATCTGCAGGTGCACAGAGAATCCAAATGCAGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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| CDS CAA 72 bp | TTGAGTCAGAGACACAGGCTTTCCTCTGGGAAAGACTaGTATTCAAGCCTTCAGCATACAAGGGAAGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LSQRHRLSSGKD*YSSLQHTREGP Trigger: GGGTCCTTCCCTTGTATGCTGAAGGCTTGAATACAAGTCTTTCCCAGAGGAAAGCCTGTGTCTCTGACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140054.3 |
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