Pregenerated sensors for GIGYF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029714Ensembl transcript IDs: ENSMUST00000031727.10, ENSMUST00000197624.5
Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCTGTGGGAGCCTGCAGGCTGGAGACCCAAGGGTCCATGCTGCTaGCACCACCCGAGTCTAAGGCCCAGGGGGCAGGTGGGACAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SLWEPAGWRPKGPCC*HHPSLRPRGQVGQA Trigger: AGCCTGTCCCACCTGCCCCCTGGGCCTTAGACTCGGGTGGTGGCAGCAGCATGGACCCTTGGGTCTCCAGCCTGCAGGCTCCCACAGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR GCA 90 bp | CTCTGCTCCCTGTGGGAGCCTGCAGGCTGGAGACCCAAGGGTCCATaGTGCTGCCACCACCCGAGTCTAAGGCCCAGGGGGCAGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LCSLWEPAGWRPKGP*CCHHPSLRPRGQVG Trigger: TCCCACCTGCCCCCTGGGCCTTAGACTCGGGTGGTGGCAGCAGCATGGACCCTTGGGTCTCCAGCCTGCAGGCTCCCACAGGGAGCAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR GCA 90 bp | CACTCGCTCGCTCGCTCGCTTCCTCCTCTGCTCCCTGTGGGAGCCTaGAGGCTGGAGACCCAAGGGTCCATGCTGCTGCCACCACCCGAG | + |
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Preference number: 1 (lower is better) Translates to: HSLARSLPPLLPVGA*RLETQGSMLLPPPE Trigger: CTCGGGTGGTGGCAGCAGCATGGACCCTTGGGTCTCCAGCCTGCAGGCTCCCACAGGGAGCAGAGGAGGAAGCGAGCGAGCGAGCGAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR CCA 90 bp | ACGGCCACAGGAGCTGATCACAGCAGGTCCAGTGGGCGGGGCTTCTaGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCCAGCACCCA | + |
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Preference number: 1 (lower is better) Translates to: TATGADHSRSSGRGF*RGPPLARCANCQHP Trigger: TGGGTGCTGGCAGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACCTGCTGTGATCAGCTCCTGTGGCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR TCA 90 bp | CTGGCCCCTTACCAGGACACCTGCCACAGTAACGGCCACAGGAGCTaGTCACAGCAGGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LAPYQDTCHSNGHRS*SQQVQWAGLLERAS Trigger: GGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACCTGCTGTGATCAGCTCCTGTGGCCGTTACTGTGGCAGGTGTCCTGGTAAGGGGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR TCA 90 bp | CCCCTCAGCAGGCCTGAGTTCAGAGCCCAGCTGACAGGCTGGCACTaGCAGGGCTTTCCCCAGCTCCCTCAGCCAGTGTGGGAGGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: PLSRPEFRAQLTGWH*QGFPQLPQPVWEGC Trigger: ACAGCCCTCCCACACTGGCTGAGGGAGCTGGGGAAAGCCCTGTCAGTGCCAGCCTGTCAGCTGGGCTCTGAACTCAGGCCTGCTGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR CCA 90 bp | TCGCTCGCTCGCTTCCTCCTCTGCTCCCTGTGGGAGCCTGCAGGCTaGAGACCCAAGGGTCCATGCTGCTGCCACCACCCGAGTCTAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLARFLLCSLWEPAG*RPKGPCCCHHPSLR Trigger: CCTTAGACTCGGGTGGTGGCAGCAGCATGGACCCTTGGGTCTCCAGCCTGCAGGCTCCCACAGGGAGCAGAGGAGGAAGCGAGCGAGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR TCA 90 bp | GAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCCAGCACCCAGCTaGCAAGTCACCCCAATGACCCACCTTCTGGGGCAGCAGGGTAAG | + |
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Preference number: 1 (lower is better) Translates to: ERASARSLCKLPAPS*QVTPMTHLLGQQGK Trigger: CTTACCCTGCTGCCCCAGAAGGTGGGTCATTGGGGTGACTTGTCAGCTGGGTGCTGGCAGTTTGCACAGCGAGCGAGCGGAGGCCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR CCA 90 bp | TCCCATCCCTCCAATGCCACCACAATGGCAAGAGGGAAAGGGAGCTaGGGGGCCAGCAGCAGCAAGACGTTTCCCCCTGGCCCATCACCC | + |
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Preference number: 1 (lower is better) Translates to: SHPSNATTMARGKGS*GASSSKTFPPGPSP Trigger: GGGTGATGGGCCAGGGGGAAACGTCTTGCTGCTGCTGGCCCCCCAGCTCCCTTTCCCTCTTGCCATTGTGGTGGCATTGGAGGGATGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR CCA 90 bp | TTCCCCAGCTCCCTCAGCCAGTGTGGGAGGGCTGTTTCGGGGGTGTaGGGAGAGGGAGCTGAGGCAGCTCATCCAATTTGTGCAACGTTC | + |
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Preference number: 1 (lower is better) Translates to: FPSSLSQCGRAVSGV*GEGAEAAHPICATF Trigger: GAACGTTGCACAAATTGGATGAGCTGCCTCAGCTCCCTCTCCCCACACCCCCGAAACAGCCCTCCCACACTGGCTGAGGGAGCTGGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR CCA 90 bp | CCATCTGTAAAGTGCCTCGTGGCGGGTGAGTTAAGGTGCATCGTGTaGTTTGTAACAAGTGCTGGGGACCCTGCCCCACTCGCTCGCTCG | + |
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Preference number: 1 (lower is better) Translates to: PSVKCLVAGELRCIV*FVTSAGDPAPLARS Trigger: CGAGCGAGCGAGTGGGGCAGGGTCCCCAGCACTTGTTACAAACCACACGATGCACCTTAACTCACCCGCCACGAGGCACTTTACAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTaGGATACACAGGACACCCACACTACCCTGAACCCCAAGGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: RVGIREVTQGRGRVN*DTQDTHTTLNPKGV Trigger: TACCCCCTTGGGGTTCAGGGTAGTGTGGGTGTCCTGTGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR TCA 90 bp | GAGGAGGCAGTGGCAGGCTCGCTCGCTAGCCCTAATACTGCATTCTaGGCAATGAGGTCGATGGGAGAGTCACTAACACAGTATATTAAA | + |
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Preference number: 1 (lower is better) Translates to: EEAVAGSLASPNTAF*AMRSMGESLTQYIK Trigger: TTTAATATACTGTGTTAGTGACTCTCCCATCGACCTCATTGCTCAGAATGCAGTATTAGGGCTAGCGAGCGAGCCTGCCACTGCCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCTCCCTGTGGGAGCCTaGAGGCTGGAGACCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTLPVGA*RLETQG Trigger: CCCTTGGGTCTCCAGCCTGCAGGCTCCCACAGGGAG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTAAGTGCTGGGGACCCTaGCCCACTCGCTCGCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTKCWGP*PTRSLA Trigger: AGCGAGCGAGCGAGTGGGGCAGGGTCCCCAGCACTT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGCAGGACAGGTCCATaGGGCCTGGTACCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGRTGP*GLVPTG Trigger: GCCAGTGGGTACCAGGCCCCATGGACCTGTCCTGCC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGGCAGCAGGGTAAGTaGAGCCTCAGGGAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGQQGK*SLREAR Trigger: CCTGGCTTCCCTGAGGCTGCACTTACCCTGCTGCCC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCTCCTCTGCTCCCTGTaGGAGCCTGCAGGCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTLLCSL*EPAGWR Trigger: TCTCCAGCCTGCAGGCTCCCACAGGGAGCAGAGGAG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCCCAAGGGTCCATGCTaGTGCCACCACCCGAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTPKGPC*CHHPSL Trigger: TAGACTCGGGTGGTGGCAGCAGCATGGACCCTTGGG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGTTTGTAACAAGTGCTaGGGACCCTGCCCCACTCGC | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTVCNKC*GPCPTR Trigger: GCGAGTGGGGCAGGGTCCCCAGCACTTGTTACAAAC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCGGGTGAGTTAAGGTaGATCGTGTGGTTTGTAACA | + |
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Preference number: 2 (lower is better) Translates to: GPVGGASGEGLRSLAVQTAGELR*IVWFVT Trigger: TGTTACAAACCACACGATGCACCTTAACTCACCCGC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAGTGGGCGGGGCTTCTaGAGAGGGCCTCCGCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSGRGF*RGPPLA Trigger: AGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCCCCTCAGCAGGCCTaGGTTCAGAGCCCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTAPQQA*VQSPAD Trigger: GTCAGCTGGGCTCTGAACTCAGGCCTGCTGAGGGGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGCTGTCCCCCGAAATaGCAGCAGTGGGGGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGCPPK*QQWGSA Trigger: GGCTGACCCCCACTGCTGCCATTTCGGGGGACAGCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTGACAGGCTGGCACTaGCAGGGCTTTCCCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLTGWH*QGFPQL Trigger: GAGCTGGGGAAAGCCCTGTCAGTGCCAGCCTGTCAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGGGAGCCTGCAGGCTaGAGACCCAAGGGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTWEPAG*RPKGPC Trigger: GCATGGACCCTTGGGTCTCCAGCCTGCAGGCTCCCA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCTGTTTCGGGGGTGTaGGGAGAGGGAGCTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTAVSGV*GEGAEA Trigger: TGCCTCAGCTCCCTCTCCCCACACCCCCGAAACAGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTCCCTCAGCCAGTGTaGGAGGGCTGTTTCGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLPQPV*EGCFGG Trigger: ACCCCCGAAACAGCCCTCCCACACTGGCTGAGGGAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCGAAATGGCAGCAGTaGGGGTCAGCCCCTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPKWQQ*GSAPQQ Trigger: CTGCTGAGGGGCTGACCCCCACTGCTGCCATTTCGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGTGCCTCGTGGCGGGTaGGTTAAGGTGCATCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTVPRGG*VKVHRV Trigger: CACACGATGCACCTTAACTCACCCGCCACGAGGCAC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACACCCAAAGCCAGCCTaGTCCCCAACACTGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTHPKPA*SPTLTQ Trigger: CTGGGTCAGTGTTGGGGATCAGGCTGGCTTTGGGTG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGTGGGGAGAGGGAGCTaGGGCAGCTCATCCAATTTG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTVGRGS*GSSSNL Trigger: CAAATTGGATGAGCTGCCTCAGCTCCCTCTCCCCAC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCTTACCAGGACACCTaGCACAGTAACGGCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPYQDT*HSNGHR Trigger: CCTGTGGCCGTTACTGTGGCAGGTGTCCTGGTAAGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGGGGCAAACAACAATaGAGACAAGCATGGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGGKQQ*RQAWAG Trigger: CCCTGCCCATGCTTGTCTTCATTGTTGTTTGCCCCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGTGGTTTGTAACAAGTaGTGGGGACCCTGCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTVVCNK*WGPCPT Trigger: AGTGGGGCAGGGTCCCCAGCACTTGTTACAAACCAC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTCCCATCCCTCCAATaGCACCACAATGGCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLPSLQ*HHNGKR Trigger: CCTCTTGCCATTGTGGTGGCATTGGAGGGATGGGAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACAGGTCCATGGGGCCTaGTACCCACTGGCCAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTQVHGA*YPLAKN Trigger: ATTTTTGGCCAGTGGGTACCAGGCCCCATGGACCTG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTCCCATTTGGTCAATaGAGGGGTCAGGTACGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLPFGQ*RGQVRS Trigger: GCTCCGTACCTGACCCCTCCATTGACCAAATGGGAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTCTGTGGGGATGGATaGGAAAGAAGAACCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLCGDG*ERRTWG Trigger: GCCCCAGGTTCTTCTTTCCCATCCATCCCCACAGAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCTAATACTGCATTCTaGGCAATGAGGTCGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPNTAF*AMRSMG Trigger: TCCCATCGACCTCATTGCTCAGAATGCAGTATTAGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATTAAGGTGCATCGTGTaGTTTGTAACAAGTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLRCIV*FVTSAG Trigger: CCCAGCACTTGTTACAAACCACACGATGCACCTTAA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAAAAACAAACCTCTGTaGACCTTCCAATGTCACACC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTKNKPL*TFQCHT Trigger: GGTGTGACATTGGAAGGTCCACAGAGGTTTGTTTTT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTACCGTCTAGCTTTTaGATGATATTTCTGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLPSSF*MIFLSL Trigger: GAGAGACAGAAATATCATCCAAAAGCTAGACGGTAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR GCA 72 bp | CCCTGCCCCACTCGCTCGCTCGCTCGCTTCCTCCTCTaGTCCCTGTGGGAGCCTGCAGGCTGGAGACCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PCPTRSLARFLL*SLWEPAGWRPK Trigger: CTTGGGTCTCCAGCCTGCAGGCTCCCACAGGGAGCAGAGGAGGAAGCGAGCGAGCGAGCGAGTGGGGCAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR GCA 72 bp | GAGCCTGCAGGCTGGAGACCCAAGGGTCCATGCTGCTaGCACCACCCGAGTCTAAGGCCCAGGGGGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: EPAGWRPKGPCC*HHPSLRPRGQV Trigger: CACCTGCCCCCTGGGCCTTAGACTCGGGTGGTGGCAGCAGCATGGACCCTTGGGTCTCCAGCCTGCAGGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR GCA 72 bp | CTGTGGGAGCCTGCAGGCTGGAGACCCAAGGGTCCATaGTGCTGCCACCACCCGAGTCTAAGGCCCAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: LWEPAGWRPKGP*CCHHPSLRPRG Trigger: CCCCCTGGGCCTTAGACTCGGGTGGTGGCAGCAGCATGGACCCTTGGGTCTCCAGCCTGCAGGCTCCCACAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| 3UTR GCA 72 bp | GCTCGCTCGCTTCCTCCTCTGCTCCCTGTGGGAGCCTaGAGGCTGGAGACCCAAGGGTCCATGCTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ARSLPPLLPVGA*RLETQGSMLLP Trigger: TGGCAGCAGCATGGACCCTTGGGTCTCCAGCCTGCAGGCTCCCACAGGGAGCAGAGGAGGAAGCGAGCGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR CCA 72 bp | GGAGCTGATCACAGCAGGTCCAGTGGGCGGGGCTTCTaGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GADHSRSSGRGF*RGPPLARCANC Trigger: GCAGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACCTGCTGTGATCAGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR TCA 72 bp | GTCAGCCCCTCAGCAGGCCTGAGTTCAGAGCCCAGCTaGCAGGCTGGCACTGACAGGGCTTTCCCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VSPSAGLSSEPS*QAGTDRAFPSS Trigger: GGAGCTGGGGAAAGCCCTGTCAGTGCCAGCCTGTCAGCTGGGCTCTGAACTCAGGCCTGCTGAGGGGCTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR CCA 72 bp | GTCAGGTACGGAGCTGTGGTCTGCTTCCCACACAGCTaGCTGCTGATCAGGGGGTTCTCACCACGGGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VRYGAVVCFPHS*LLIRGFSPRGP Trigger: GGGGCCCCGTGGTGAGAACCCCCTGATCAGCAGCCAGCTGTGTGGGAAGCAGACCACAGCTCCGTACCTGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR TCA 72 bp | TCCGCTCGCTCGCTGTGCAAACTGCCAGCACCCAGCTaGCAAGTCACCCCAATGACCCACCTTCTGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SARSLCKLPAPS*QVTPMTHLLGQ Trigger: CTGCCCCAGAAGGTGGGTCATTGGGGTGACTTGTCAGCTGGGTGCTGGCAGTTTGCACAGCGAGCGAGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR TCA 72 bp | TACCAGGACACCTGCCACAGTAACGGCCACAGGAGCTaGTCACAGCAGGTCCAGTGGGCGGGGCTTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YQDTCHSNGHRS*SQQVQWAGLLE Trigger: CTCCAGAAGCCCCGCCCACTGGACCTGCTGTGATCAGCTCCTGTGGCCGTTACTGTGGCAGGTGTCCTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR TCA 72 bp | GCAAACTGCCAGCACCCAGCTGACAAGTCACCCCAATaGCCCACCTTCTGGGGCAGCAGGGTAAGTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ANCQHPADKSPQ*PTFWGSRVSAA Trigger: GGCTGCACTTACCCTGCTGCCCCAGAAGGTGGGTCATTGGGGTGACTTGTCAGCTGGGTGCTGGCAGTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR CCA 72 bp | AAGTGCCTCGTGGCGGGTGAGTTAAGGTGCATCGTGTaGTTTGTAACAAGTGCTGGGGACCCTGCCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KCLVAGELRCIV*FVTSAGDPAPL Trigger: GAGTGGGGCAGGGTCCCCAGCACTTGTTACAAACCACACGATGCACCTTAACTCACCCGCCACGAGGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR CCA 72 bp | GCCAGAAAATACATTCATGTGGCAAAGGCAGGGAGCTaGGGCTTTCAGTGTCACACCCAGGCTGTCCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: ARKYIHVAKAGS*GFQCHTQAVPR Trigger: TCGGGGGACAGCCTGGGTGTGACACTGAAAGCCCCAGCTCCCTGCCTTTGCCACATGAATGTATTTTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR TCA 72 bp | GTGGCAGGCTCGCTCGCTAGCCCTAATACTGCATTCTaGGCAATGAGGTCGATGGGAGAGTCACTAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: VAGSLASPNTAF*AMRSMGESLTQ Trigger: CTGTGTTAGTGACTCTCCCATCGACCTCATTGCTCAGAATGCAGTATTAGGGCTAGCGAGCGAGCCTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR GCA 72 bp | CCATCTGTAAAGTGCCTCGTGGCGGGTGAGTTAAGGTaGATCGTGTGGTTTGTAACAAGTGCTGGGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSVKCLVAGELR*IVWFVTSAGDP Trigger: AGGGTCCCCAGCACTTGTTACAAACCACACGATGCACCTTAACTCACCCGCCACGAGGCACTTTACAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR CCA 72 bp | CCTACTTCCCCAGGACAGAAACTAGAAATACATTCATaGAGGAGGCAGTGGCAGGCTCGCTCGCTAGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PTSPGQKLEIHS*RRQWQARSLAL Trigger: TAGGGCTAGCGAGCGAGCCTGCCACTGCCTCCTCCATGAATGTATTTCTAGTTTCTGTCCTGGGGAAGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| 3UTR CCA 72 bp | ATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTaGGATACACAGGACACCCACACTACCCTGAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: IREVTQGRGRVN*DTQDTHTTLNP Trigger: GGGGTTCAGGGTAGTGTGGGTGTCCTGTGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCCCAGCAGCGGGGGTaGCGAGGGCCCTGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTAQQRG*RGPWGK Trigger: TTTGCCCCAGGGCCCTCGCCACCCCCGCTGCTGGGC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGTGAGCTGCTGCTGCTaGGGCGGCGTCAGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTVSCCC*GGVRSP Trigger: GGGGGACCTGACGCCGCCGCAGCAGCAGCAGCTCAC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCCAAGCTGCACTCGGTaGTTGGGGGCCTGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTPSCTR*LGAWAR Trigger: GCGGGCCCAGGCCCCCAACCACCGAGTGCAGCTTGG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCCCGCCTTTTGGCCTTaGTGCCCTCCCCAGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTPAFWP*CPPQGP Trigger: TGGGCCCTGGGGAGGGCAGCAAGGCCAAAAGGCGGG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTGCGTGAAGCCGTCCTaGGGCCGAGGGATGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTCVKPS*GRGMPC Trigger: GCAGGGCATCCCTCGGCCCCAGGACGGCTTCACGCA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCTGCTGGTACAGGGCTaGCGCAGCCAGCTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTLLVQG*RSQLLL Trigger: CAGCAGGAGCTGGCTGCGGCAGCCCTGTACCAGCAG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTCCCGCGGTGCCGCCTaGTTGTGCAGTTGGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSRGAA*LCSWRS Trigger: TGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCAGAGGCTCCCGCGGTaGCGCCTGCTTGTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTQRLPR*RLLVQL Trigger: CAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGTTGCCACCGCTGCTaGCCCCACTCTTGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGCHRC*PHSCLA Trigger: GGCCAGACAAGAGTGGGGGCAGCAGCGGTGGCAACC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCTCAGCCAGGCCTCCTaGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTLSQAS*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGGCATGGCAGGAGATaGGGGTGGAGAGGCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGHGRR*GWRGHA Trigger: AGCGTGGCCTCTCCACCCCCATCTCCTGCCATGCCC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTGGACAGGCCCTGCTTaGCTAGGCCAGCCCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTWTGPA*LGQPRA Trigger: CGCTCTGGGCTGGCCTAGCCAAGCAGGGCCTGTCCA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCGAACAGGTCGGCCTaGCAGGTGGCTGTACGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTANRSA*QVAVRV Trigger: GACTCGTACAGCCACCTGTCAGGCCGACCTGTTCGC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTAGGCGGCAATGGGGTTaGCTCCTTCCCTCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTRRQWG*LLPSCL Trigger: GAGGCAGGAGGGAAGGAGGCAACCCCATTGCCGCCT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCGGGAGCTGGCGGCTaGCAACCAGCTGCAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTAGAGG*QPAAES Trigger: ACTTTCTGCAGCTGGTTGGCAGCCGCCAGCTCCCGC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTCCTCCTGCTGCTGCTaGTGTTGGCGCCGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSSCCC*CWRRFS Trigger: GGAGAAGCGGCGCCAACAGCAGCAGCAGCAGGAGGA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTGCTGCTGCTGCTGCTaGTGCCGCTGTTGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTCCCCC*CRCWLA Trigger: AGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTGCATGCTCCTTCCTTaGGCCAGCCCCTCCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTCMLLP*ASPSLL Trigger: GAGGAGGGAGGGGCTGGCCCAAGGAAGGAGCATGCA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCCTCAGACACCCACTaGTTCAGAGGGGCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTASDTH*FRGAEP Trigger: GGGCTCTGCCCCTCTGAACCAGTGGGTGTCTGAGGC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCTGCCGCTGTTGGCTaGCTTTCTGCTTGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTAAAVG*LSAWPS Trigger: GGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTCAGTGCCCGCCTTTTaGCCTTGCTGCCCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSVPAF*PCCPPQ Trigger: CTGGGGAGGGCAGCAAGGCCAAAAGGCGGGCACTGA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCACGGCCCCACATCTTaGTCACCTCTCCCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTHGPTS*SPLPEA Trigger: AGCCTCTGGGAGAGGTGATCAAGATGTGGGGCCGTG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTAGCTCCTCCTCTTCCTaGCGTCGCTTCTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSSSSS*RRFCSS Trigger: GGAGGAGCAGAAGCGACGGCAGGAAGAGGAGGAGCT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTTCATGGACAGGCCCTaGTTGGCTAGGCCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTFMDRP*LARPAQ Trigger: CTGGGCTGGCCTAGCCAAGCAGGGCCTGTCCATGAA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTCTGTAGGGAGGTGCTaGTCAGCCAGGCCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSVGRC*SARPPA Trigger: AGCAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCCTGCTCCTCAGGGATaGCTTCCTTGGGGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTPAPQG*LPWGPS Trigger: AGAAGGGCCCCAAGGAAGCCATCCCTGAGGAGCAGG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGTCGGGAGCAGGTTCTaGTCTCCACCTCTGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTVGSRF*SPPLGV Trigger: AACCCCCAGAGGTGGAGACCAGAACCTGCTCCCGAC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTGCTGCTGCCGCTGTTaGCTGGCTTTCTGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTCCCRC*LAFCLA Trigger: GGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGCTCCCGCCACTCTTaGGAGTATCTTCCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGSRHS*EYLPRV Trigger: GACTCTGGGAAGATACTCTCAAGAGTGGCGGGAGCC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGTGCTGTGGTTGGCCTaGAAGGCTGTCTGTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTVLWLA*KAVCRE Trigger: CTCCCTACAGACAGCCTTTCAGGCCAACCACAGCAC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTACCAGCTGCAGAAAGTaGTGGTGCTGCAGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTTSCRK*WCCSCW Trigger: CCAGCAGCTGCAGCACCAGCACTTTCTGCAGCTGGT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTATTTGCTCACACCACTaGGTGAAGCCGTCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTICSHH*VKPSWG Trigger: GCCCCAGGACGGCTTCACGCAGTGGTGTGAGCAAAT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCAGGGCCCAGTTTGGTaGTGTGGTTGGCCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTQGPVW*CGWPER Trigger: CCTTTCAGGCCAACCACAGCACCAAACTGGGCCCTG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGTCGTGAAAGGGCCTTaGATTTCCCCCTGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTVVKGP*ISPCGS Trigger: GGACCCACAGGGGGAAATCCAAGGCCCTTTCACGAC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGTCGGCCTGACAGGTaGCTGTACGAGTCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGRPDR*LYESLR Trigger: TCTCAGTGACTCGTACAGCCACCTGTCAGGCCGACC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGCTGGCTTTCTGCTTaGCCCTCCGCTCCAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGWLSA*PSAPGI Trigger: AATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCCCCAAGTCTCCAGCTaGCATCATCCTCTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTPQVSS*HHPLAP Trigger: AGGAGCAAGAGGATGATGGCAGCTGGAGACTTGGGG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCGGAAATCAAGCTCCTaGTCCTCAGGGATGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTRKSSS*SSGMAS Trigger: GGAAGCCATCCCTGAGGAGCAGGAGCTTGATTTCCG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTTGAGAGCCTGGAGCTaGTGCAGGAACGTAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTLRAWS*CRNVVS Trigger: GCTCACTACGTTCCTGCAGCAGCTCCAGGCTCTCAA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCCAGCAGAGTCTTCATaGACAGGCCCTGCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTPAESS*TGPAWL Trigger: TAGCCAAGCAGGGCCTGTCCATGAAGACTCTGCTGG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGACCTTGTTCTCCTTaGCATAGAGGGCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGPCSP*HRGPAS Trigger: AGATGCTGGCCCTCTATGTCAAGGAGAACAAGGTCC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTCCAGAGCCAGAGGTTaGAGCGGTTCCTCTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSRARG*SGSSCN Trigger: GTTACAAGAGGAACCGCTGCAACCTCTGGCTCTGGA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTACTCCATCCCTCCTTaGAGGCTTCTCAAACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTYSIPP*RLLKPP Trigger: AGGCGGTTTGAGAAGCCTGCAAGGAGGGATGGAGTA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCGGAGGCATCGAAAGTaGCCATCTCCTCATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTRRHRK*PSPHPH Trigger: ATGAGGATGAGGAGATGGGCACTTTCGATGCCTCCG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTACATTCGTCGCTTGCTaGTGCTGTAGCAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTTFVAC*CCSSFS Trigger: GCTGAAGCTGCTACAGCAGCAGCAAGCGACGAATGT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTAGGGTGTGCAGCATTTaGTCACACCACTGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTRVCSI*SHHCVK Trigger: CTTCACGCAGTGGTGTGAGCAAATGCTGCACACCCT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTTGGATTTCCCCCTGTaGGTCCTTGTAGAACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTLDFPL*VLVEPL Trigger: AAGTGGTTCTACAAGGACCCACAGGGGGAAATCCAA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTCACTAAGAGTGACATaGAGAAGTAGCCAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSLRVT*RSSQPG Trigger: TCCAGGCTGGCTACTTCTCCATGTCACTCTTAGTGA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCCCTCGGCTCCGAGTaGTGCCCCTGCCACGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTALGSE*CPCHGR Trigger: CCTCCCGTGGCAGGGGCAGCACTCGGAGCCGAGGGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGGTGGCGAGGGCCCTaGGGCAAAGGGCACACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGWRGP*GKGHTA Trigger: GGCCGTGTGCCCTTTGCCCCAGGGCCCTCGCCACCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTCTAGAATTGGACCCTaGGTCGAAGAGTTAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSRIGP*VEELIG Trigger: ACCAATTAACTCTTCGACTCAGGGTCCAATTCTAGA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACGCCTCCGCTCCCCATaGTCCCGCCAGCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTRLRSP*SRQPAE Trigger: CTCTGCTGGCTGGCGGGAGCATGGGGAGCGGAGGCG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCCTGCCACGGGAGGTaGCAGGCAAAGGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPCHGR*QAKGAQ Trigger: CTGGGCCCCCTTTGCCTGCCACCTCCCGTGGCAGGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGGCAGTGGCAGCTGTaGAGTGGCGGAGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGQWQL*SGGGPG Trigger: CCCAGGGCCTCCGCCACTCCACAGCTGCCACTGCCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCTGCACTCGGTGGTTaGGGGCCTGGGCCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTAALGG*GPGPAE Trigger: CTCTGCGGGCCCAGGCCCCCAACCACCGAGTGCAGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCTCACACCACTGCGTaGAGCCGTCCTGGGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTAHTTA*SRPGAE Trigger: CTCGGCCCCAGGACGGCTTCACGCAGTGGTGTGAGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCCAAGCCCCCAAGCTaGACTCGGTGGTTGGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPKPPS*TRWLGA Trigger: GGCCCCCAACCACCGAGTGCAGCTTGGGGGCTTGGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCTCCCGCTTCGCCCTaGGCTCCACTTCTCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPPASP*APLLCA Trigger: AGCGCAGAGAAGTGGAGCTCAGGGCGAAGCGGGAGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCTCCTGATCCATGTTaGCCAGCAGCGGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTAPDPC*PAAGVA Trigger: CGCCACCCCCGCTGCTGGGCAACATGGATCAGGAGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAGCCAGGCCTCCTGCTaGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSQASC*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGAGTGGCGGAGGCCCTaGGTTTGCATGGCAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTEWRRP*VCMAAV Trigger: CACCGCTGCCATGCAAACCCAGGGCCTCCGCCACTC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTAATTTATGCTGCAGTTaGAGCTGTTCTAGAATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGGASGEGLRSLAVQTNLCCS*SCSRIG Trigger: TCCAATTCTAGAACAGCTCCAACTGCAGCATAAATT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGTCCCAGAGGGGGCCTaGATCTGGCACCGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTVPEGA*IWHRQG Trigger: TCCTTGTCGGTGCCAGATTCAGGCCCCCTCTGGGAC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGGACTCCACCTCCTTaGGGATGGCGACAGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGTPPP*GWRQPW Trigger: CCATGGCTGTCGCCATCCTCAAGGAGGTGGAGTCCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACGGAGGCCCTGGGTTTaGATGGCAGCGGTGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTRRPWV*MAAVNC Trigger: GCAGTTCACCGCTGCCATGCAAACCCAGGGCCTCCG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGCTGGTGCTGCAGCTaGTGGTACAGGGCTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTCWCCS*WYRAAA Trigger: TGCGGCAGCCCTGTACCAGCAGCTGCAGCACCAGCA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAACGTAGTGAGCTGCTaGTGCTGCGGCGGCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTNVVSC*CCGGVR Trigger: CCTGACGCCGCCGCAGCAGCAGCAGCTCACTACGTT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAGGAACGTAGTGAGCTaGTGCTGCTGCGGCGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTRNVVS*CCCGGV Trigger: GACGCCGCCGCAGCAGCAGCAGCTCACTACGTTCCT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATCTCCTCCCGTCGTTTaGGCTCCTCCTCCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSPPVV*APPPPA Trigger: AGCGGGAGGAGGAGGAGCGCAAACGACGGGAGGAGA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGCTCCTCCTGCTGCTaGTGCTGTTGGCGCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTCSSCC*CCWRRF Trigger: GAAGCGGCGCCAACAGCAGCAGCAGCAGGAGGAGCA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATCCTGCCGTCGCTTCTaGTCCTCCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSCRRF*SSCCCC Trigger: GCAGCAGCAGCAGGAGGAGCAGAAGCGACGGCAGGA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGCTGCTGCTGCTGTTaGCGCCGCTTCTCCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTCCCCC*RRFSSR Trigger: ACGGGAGGAGAAGCGGCGCCAACAGCAGCAGCAGCA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATTTGCATGGCAGCGGTaGACTGCTCCTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTFAWQR*TAPPPG Trigger: CCCTGGAGGAGGAGCAGTTCACCGCTGCCATGCAAA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACACCTCTGGGGGTTTTaGGAGCCTGGAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTHLWGF*EPGAAA Trigger: TGCAGCAGCTCCAGGCTCTCAAAACCCCCAGAGGTG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAATGGCAGCGGTGAACTaGTCCTCCTCCAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTMAAVN*SSSREL Trigger: CAGCTCCCTGGAGGAGGAGCAGTTCACCGCTGCCAT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACGGCTGCCAACCAGCTaGAGAAAGTGCTGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTRLPTS*RKCWCC Trigger: GCAGCACCAGCACTTTCTGCAGCTGGTTGGCAGCCG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACAGGTCCCCCATAGCTaGCTTTTCCCGGAGCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTQVPHS*LFPERR Trigger: ACGACGCTCCGGGAAAAGGCAGCTATGGGGGACCTG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGGGAACGTCTAGGCTaGCCGCAGTGCTCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTWERLG*PQCSGC Trigger: ACACCCTGAGCACTGCGGGCAGCCTAGACGTTCCCA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGTTGGCTGGCTTTCTaGTTGGCCCTCCGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTCWLAF*LALRSR Trigger: CCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGCTGCTGCTGCTGCTaGCGCTGTTGGCTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTCCCCC*RCWLAF Trigger: GAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTGTCTGTAGGGAGGTaGTGCTCAGCCAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLSVGR*CSARPP Trigger: AGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCCCAGGGCCCAGTTTaGTGCTGTGGTTGGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPQGPV*CCGWPE Trigger: TTCAGGCCAACCACAGCACCAAACTGGGCCCTGGGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAATGCTAGGGTCGGAGTaGAGCATCAGTGCCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTMLGSE*SISARL Trigger: AAGGCGGGCACTGATGCTTCACTCCGACCCTAGCAT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGCCACCAGCTTCTCTaGCTCCTGCTGCAAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGHQLL*LLLQVL Trigger: AAGCACTTGCAGCAGGAGGCAGAGAAGCTGGTGGCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGCAGAAAGTGCTGGTaGTGCAGCTGCTGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTCRKCW*CSCWYR Trigger: CCTGTACCAGCAGCTGCAGCACCAGCACTTTCTGCA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGAGTGAAGCATCAGTaGCCGCCTTTTGGCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGVKHQ*PPFGLA Trigger: AGCAAGGCCAAAAGGCGGGCACTGATGCTTCACTCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTGCCAGCTTGTATTTaGGCATGGCAGGAGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLPACI*AWQEMG Trigger: CCCCATCTCCTGCCATGCCCAAATACAAGCTGGCAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTGTCATCCCAGCTTTaGCTTCGCTGGATCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLSSQL*LRWISR Trigger: TCGGGAGATCCAGCGAAGCCAAAGCTGGGATGACAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAGCTGCAGAAAGTGCTaGTGCTGCAGCTGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSCRKC*CCSCWY Trigger: GTACCAGCAGCTGCAGCACCAGCACTTTCTGCAGCT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGGGGTTTTGAGAGCCTaGAGCTGCTGCAGGAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTGVLRA*SCCRNV Trigger: TACGTTCCTGCAGCAGCTCCAGGCTCTCAAAACCCC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR TCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCAATTCTCACTGTCTaGGCGTGCATGCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPILTV*ACMLLP Trigger: AGGAAGGAGCATGCACGCTCAGACAGTGAGAATTGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAGCGAGAAGTTTCTCTaGTCCTCCTCAGTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSEKFL*SSSVRG Trigger: GCCTCTGACTGAGGAGGAGCAGAGAAACTTCTCGCT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCCTCCTGCTGCAAGTaGTTCAAGCCTTCTTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTASCCK*FKPSSS Trigger: AGACGAAGAAGGCTTGAAGCACTTGCAGCAGGAGGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGTATGTCCCAAAGACTaGCCTCACCACCTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTVCPKD*PHHLTV Trigger: CACAGTCAGGTGGTGAGGCCAGTCTTTGGGACATAC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATTCTCTGCCTCCTGCTaGAAGTGCTTCAAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTFSASC*KCFKPS Trigger: AGAAGGCTTGAAGCACTTGCAGCAGGAGGCAGAGAA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGTTTGGTGCTGTGGTTaGCCTGAAAGGCTGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTVWCCG*PERLSV Trigger: TACAGACAGCCTTTCAGGCCAACCACAGCACCAAAC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCCATAGCGGTAATCTaGCAGCTTGTATTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPIAVI*QLVFGH Trigger: ATGCCCAAATACAAGCTGGCAGATTACCGCTATGGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAAGTCGAAGAGTTAATTaGTATGTCCCAAAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSRRVN*YVPKTG Trigger: GCCAGTCTTTGGGACATACCAATTAACTCTTCGACT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCTCCAGGAATTGTTTaGCAAATTCTTTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIREVTQGRGRVNWDTAPGIV*QILWLP Trigger: TGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTAGCTGCACTCGGTGGTaGGGGGCCTGGGCCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTSCTRW*GAWARR Trigger: TCTGCGGGCCCAGGCCCCCAACCACCGAGTGCAGCT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 90 bp | TACAGGGCTGCCGCAGCCAGCTCCTGCTGCTTCTTCAGCCGCTCCTaGTCCATGTTGCCCAGCAGCGGGGGTGGCGAGGGCCCTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRAAAASSCCFFSRS*SMLPSSGGGEGPGA Trigger: TGCCCCAGGGCCCTCGCCACCCCCGCTGCTGGGCAACATGGATCAGGAGCGGCTGAAGAAGCAGCAGGAGCTGGCTGCGGCAGCCCTGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | CGGTGGTTGGGGGCCTGGGCCCGCAGAGGCTCCCGCGGTGCCGCCTaGTTGTGCAGTTGGCGCTCACTTTCCATCTGCAGCTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWLGAWARRGSRGAA*LCSWRSLSICSSSR Trigger: TCTGCTGGAGCTGCAGATGGAAAGTGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTGCGGGCCCAGGCCCCCAACCACCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | CTGCACTCGGTGGTTGGGGGCCTGGGCCCGCAGAGGCTCCCGCGGTaGCGCCTGCTTGTGCAGTTGGCGCTCACTTTCCATCTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHSVVGGLGPQRLPR*RLLVQLALTFHLQL Trigger: GAGCTGCAGATGGAAAGTGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTGCGGGCCCAGGCCCCCAACCACCGAGTGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | CTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCCGCTGTTGGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSQASCCCCCCCCCC*CRCWLAFCLALRSR Trigger: CCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | CTGCTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCCGCTGTTGGCTGGCTTTCTGCTTGGCCCTCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSQASCCCCCCCCC*CCRCWLAFCLALRS Trigger: GGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GTGCTGCTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCCGCTGTTGGCTGGCTTTCTGCTTGGCCCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSQASCCCCCCCC*CCCRCWLAFCLALR Trigger: GCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | CCGCTCCTGATCCATGTTGCCCAGCAGCGGGGGTGGCGAGGGCCCTaGGGCAAAGGGCACACGGCCCCACATCTTGATCACCTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLLIHVAQQRGWRGP*GKGHTAPHLDHLSQ Trigger: CTGGGAGAGGTGATCAAGATGTGGGGCCGTGTGCCCTTTGCCCCAGGGCCCTCGCCACCCCCGCTGCTGGGCAACATGGATCAGGAGCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGAGGCGGCAATGGGGTaGCCTCCTTCCCTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTEAAMG*PPSLLP Trigger: AGGCAGGAGGGAAGGAGGCAACCCCATTGCCGCCTC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGCGGAGGCCCTGGGTTaGCATGGCAGCGGTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTAEALG*HGSGEL Trigger: CAGTTCACCGCTGCCATGCAAACCCAGGGCCTCCGC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTATGGACAGGCCCTGCTaGGCTAGGCCAGCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTMDRPC*ARPAQS Trigger: GCTCTGGGCTGGCCTAGCCAAGCAGGGCCTGTCCAT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GCTGTGGAGTGGCGGAGGCCCTGGGTTTGCATGGCAGCGGTGAACTaGTCCTCCTCCAGGGAGCTGTCCTGCAGGGAGGCCACCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVEWRRPWVCMAAVN*SSSRELSCREATSF Trigger: GAAGCTGGTGGCCTCCCTGCAGGACAGCTCCCTGGAGGAGGAGCAGTTCACCGCTGCCATGCAAACCCAGGGCCTCCGCCACTCCACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GTCGTACACTGCGGGAGCTGGCGGCTGCCAACCAGCTGCAGAAAGTaGTGGTGCTGCAGCTGCTGGTACAGGGCTGCCGCAGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVHCGSWRLPTSCRK*WCCSCWYRAAAASS Trigger: GGAGCTGGCTGCGGCAGCCCTGTACCAGCAGCTGCAGCACCAGCACTTTCTGCAGCTGGTTGGCAGCCGCCAGCTCCCGCAGTGTACGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | TTGGGGGCCTGGGCCCGCAGAGGCTCCCGCGGTGCCGCCTGCTTGTaGAGTTGGCGCTCACTTTCCATCTGCAGCTCCAGCAGAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGAWARRGSRGAACL*SWRSLSICSSSRVF Trigger: GAAGACTCTGCTGGAGCTGCAGATGGAAAGTGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTGCGGGCCCAGGCCCCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GAGGTGCTGCTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCCGCTGTTGGCTGGCTTTCTGCTTGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVLLSQASCCCCCCC*CCCCRCWLAFCLAL Trigger: GAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCACCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | AGGGAGGTGCTGCTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCCGCTGTTGGCTGGCTTTCTGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: REVLLSQASCCCCCC*CCCCCRCWLAFCLA Trigger: GGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCACCTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCTGCTGCTGCCGCTGTaGGCTGGCTTTCTGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTLLLPL*AGFLLG Trigger: GCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 90 bp | GACTGCTCTTCAGGCCCAGGCTTCGGGCCAGGCTCCCGCCACTCTTaGGAGTATCTTCCCAGAGTCCCAGGTTGCCACCGCTGCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DCSSGPGFGPGSRHS*EYLPRVPGCHRCCP Trigger: GGGGCAGCAGCGGTGGCAACCTGGGACTCTGGGAAGATACTCTCAAGAGTGGCGGGAGCCTGGCCCGAAGCCTGGGCCTGAAGAGCAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 90 bp | GCCTTGCTGCCCTCCCCAGGGCCCAGTTTGGTGCTGTGGTTGGCCTaGAAGGCTGTCTGTAGGGAGGTGCTGCTCAGCCAGGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLPSPGPSLVLWLA*KAVCREVLLSQASC Trigger: GCAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCACAGCACCAAACTGGGCCCTGGGGAGGGCAGCAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | CGCCGAAAGAGCTCCTCCTCTTCCTGCCGTCGCTTCTGCTCCTCCTaGTGCTGCTGCTGTTGGCGCCGCTTCTCCTCCCGTCGTTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRKSSSSSCRRFCSS*CCCCWRRFSSRRLR Trigger: GCGCAAACGACGGGAGGAGAAGCGGCGCCAACAGCAGCAGCAGCAGGAGGAGCAGAAGCGACGGCAGGAAGAGGAGGAGCTCTTTCGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | AGGCTGCCCGCAGTGCTCAGGGTGTGCAGCATTTGCTCACACCACTaGGTGAAGCCGTCCTGGGGCCGAGGGATGCCCTGCAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLPAVLRVCSICSHH*VKPSWGRGMPCSSF Trigger: GAAGCTGCTGCAGGGCATCCCTCGGCCCCAGGACGGCTTCACGCAGTGGTGTGAGCAAATGCTGCACACCCTGAGCACTGCGGGCAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 90 bp | AAGGCTGTCTGTAGGGAGGTGCTGCTCAGCCAGGCCTCCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGTTGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAVCREVLLSQASCC*CCCCCCCCCRCWLA Trigger: AGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTGGCTGGCTTTCTGCTaGGCCCTCCGCTCCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTWLAFC*ALRSRN Trigger: ATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CCA 90 bp | TCCCCCATAGCTGCCTTTTCCCGGAGCGTCGTACACTGCGGGAGCTaGCGGCTGCCAACCAGCTGCAGAAAGTGCTGGTGCTGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPIAAFSRSVVHCGS*RLPTSCRKCWCCSC Trigger: GCAGCTGCAGCACCAGCACTTTCTGCAGCTGGTTGGCAGCCGCCAGCTCCCGCAGTGTACGACGCTCCGGGAAAAGGCAGCTATGGGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGTACTCCATCCCTCCTaGCAGGCTTCTCAAACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTVLHPS*QASQTA Trigger: GGCGGTTTGAGAAGCCTGCAAGGAGGGATGGAGTAC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCGCCTGCTTGTGCAGTaGGCGCTCACTTTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTRLLVQ*ALTFHL Trigger: CAGATGGAAAGTGAGCGCCAACTGCACAAGCAGGCG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GTGCCCGCCTTTTGGCCTTGCTGCCCTCCCCAGGGCCCAGTTTGGTaGTGTGGTTGGCCTGAAAGGCTGTCTGTAGGGAGGTGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPAFWPCCPPQGPVW*CGWPERLSVGRCCS Trigger: TGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCACAGCACCAAACTGGGCCCTGGGGAGGGCAGCAAGGCCAAAAGGCGGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | TCAGTGCCCGCCTTTTGGCCTTGCTGCCCTCCCCAGGGCCCAGTTTaGTGCTGTGGTTGGCCTGAAAGGCTGTCTGTAGGGAGGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVPAFWPCCPPQGPV*CCGWPERLSVGRCC Trigger: GCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCACAGCACCAAACTGGGCCCTGGGGAGGGCAGCAAGGCCAAAAGGCGGGCACTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTACTGCAGCAAACTCCTaGTCCTGTAGTTCCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTTAANS*SCSSSG Trigger: CCCGGAGGAACTACAGGACAAGGAGTTTGCTGCAGT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTAGGCTCCCGCCACTCTaGAGAGTATCTTCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTRLPPL*RVSSQS Trigger: ACTCTGGGAAGATACTCTCAAGAGTGGCGGGAGCCT...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 90 bp | TCCTTGTCATCTTCAAAGCCATCGAGCCCCCGGCATCTCCGGAGGTaGGAGTTGCCGCCCCCAACCCGCCCATCCTCTTCACCACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSKPSSPRHLRR*ELPPPTRPSSSPHP Trigger: AGGGTGTGGTGAAGAGGATGGGCGGGTTGGGGGCGGCAACTCTCACCTCCGGAGATGCCGGGGGCTCGATGGCTTTGAAGATGACAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GCCAGCGATCACCATCTCGCCGGGGTCCCGCCCCAAGTCTCCAGCTaGCATCATCCTCTTGCTCCTCTCGAAGTGAGCGCCAATTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASDHHLAGVPPQVSS*HHPLAPLEVSANSH Trigger: GTGAGAATTGGCGCTCACTTCGAGAGGAGCAAGAGGATGATGGCAGCTGGAGACTTGGGGCGGGACCCCGGCGAGATGGTGATCGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS GCA 90 bp | GGTGGGGAGCTGGGTGCAGGGGGCACAGGGACATTCGTCGCTTGCTaGTGCTGTAGCAGCTTCAGCAACAATTCCTGCTGCCGTACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGELGAGGTGTFVAC*CCSSFSNNSCCRTC Trigger: GCAGGTACGGCAGCAGGAATTGTTGCTGAAGCTGCTACAGCAGCAGCAAGCGACGAATGTCCCTGTGCCCCCTGCACCCAGCTCCCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GTTTGGTGCTGTGGTTGGCCTGAAAGGCTGTCTGTAGGGAGGTGCTaGTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VWCCGWPERLSVGRC*SARPPAAAAAAAAA Trigger: AGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCACAGCACCAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | TCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGTTaGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCCCCCCCCCCCCRC*LAFCLALRSRNCLA Trigger: TGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | TTTTGGCCTTGCTGCCCTCCCCAGGGCCCAGTTTGGTGCTGTGGTTaGCCTGAAAGGCTGTCTGTAGGGAGGTGCTGCTCAGCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FWPCCPPQGPVWCCG*PERLSVGRCCSARP Trigger: AGGCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCACAGCACCAAACTGGGCCCTGGGGAGGGCAGCAAGGCCAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | TCTCGCCGGGGTCCCGCCCCAAGTCTCCAGCTGCCATCATCCTCTTaGTCCTCTCGAAGTGAGCGCCAATTCTCACTGTCTGAGCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRRGPAPSLQLPSSS*SSRSERQFSLSERA Trigger: TGCACGCTCAGACAGTGAGAATTGGCGCTCACTTCGAGAGGAGCAAGAGGATGATGGCAGCTGGAGACTTGGGGCGGGACCCCGGCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS GCA 90 bp | GGGGAGCTGGGTGCAGGGGGCACAGGGACATTCGTCGCTTGCTGCTaGTGTAGCAGCTTCAGCAACAATTCCTGCTGCCGTACCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GELGAGGTGTFVACC*CSSFSNNSCCRTCL Trigger: CAAGCAGGTACGGCAGCAGGAATTGTTGCTGAAGCTGCTACAGCAGCAGCAAGCGACGAATGTCCCTGTGCCCCCTGCACCCAGCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | TTGTCGTCCAGAGAGGACCCAAGGCTGGCAGTGAAGACGGTGAGCTaGAGTTCTCTGGAGGCGGCAATGGGGTTGCCTCCTTCCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSREDPRLAVKTVS*SSLEAAMGLPPSLL Trigger: CAGGAGGGAAGGAGGCAACCCCATTGCCGCCTCCAGAGAACTCCAGCTCACCGTCTTCACTGCCAGCCTTGGGTCCTCTCTGGACGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTGGAGCTGTTCTAGAATaGGACCCTGAGTCGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTGAVLE*DPESKS Trigger: ACTCTTCGACTCAGGGTCCAATTCTAGAACAGCTCC...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | CCCATAGCGGTAATCTGCCAGCTTGTATTTGGGCATGGCAGGAGATaGGGGTGGAGAGGCCACGCTGCCACCACTCGAAAGGGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIAVICQLVFGHGRR*GWRGHAATTRKGSQ Trigger: CTGAGAGCCCTTTCGAGTGGTGGCAGCGTGGCCTCTCCACCCCCATCTCCTGCCATGCCCAAATACAAGCTGGCAGATTACCGCTATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS CCA 90 bp | GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGTTGGCTaGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTTGGCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAAAAAAAAAVG*LSAWPSAPGIVWQI Trigger: AATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCGCTCCAGGAATTGTTaGGCAAATTCTTTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTRSRNC*ANSLAS Trigger: GGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 90 bp | GCTGCTGTAGCAGCTTCAGCAACAATTCCTGCTGCCGTACCTGCTTaGGCCGAAAGAGCTCCTCCTCTTCCTGCCGTCGCTTCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAVAASATIPAAVPA*AERAPPLPAVASAP Trigger: AGGAGCAGAAGCGACGGCAGGAAGAGGAGGAGCTCTTTCGGCGCAAGCAGGTACGGCAGCAGGAATTGTTGCTGAAGCTGCTACAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | TTCTCAAACCGCCTCTCGCCTCTGTCATCCCAGCTTTGGCTTCGCTaGATCTCCCGAGGATTCCTTCCGAAGGCCCCATCGCCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSNRLSPLSSQLWLR*ISRGFLPKAPSPSS Trigger: TGAGGAAGGCGATGGGGCCTTCGGAAGGAATCCTCGGGAGATCCAGCGAAGCCAAAGCTGGGATGACAGAGGCGAGAGGCGGTTTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTTTCCTCAATGCTTCTTaGGTAAAAGCAGCTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTFLNAS*VKAAVT Trigger: GGTGACAGCTGCTTTTACCAAAGAAGCATTGAGGAA...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAGTGGGCGGGGCTTCTGGAGAGGGCCTCCGCTCGCTCGCTGTGCAAACTCACTTCTCTGCGCTCTaGAAATTTATGCTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGASGEGLRSLAVQTHFSAL*KFMLQL Trigger: CAACTGCAGCATAAATTTCAAGAGCGCAGAGAAGTG...AGTTTGCACAGCGAGCGAGCGGAGGCCCTCTCCAGAAGCCCCGCCCACTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGCCCGCCTTTTGGCCTaGCTGCCCTCCCCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTARLLA*LPSPGP Trigger: GGGCCCTGGGGAGGGCAGCAAGGCCAAAAGGCGGGC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | GCAAAGGGCACACGGCCCCACATCTTGATCACCTCTCCCAGAGGCTaGAAACCCTCATCGCAGCCCCTCTTCACTAAGAGTGACATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AKGTRPHILITSPRG*KPSSQPLFTKSDME Trigger: CTCCATGTCACTCTTAGTGAAGAGGGGCTGCGATGAGGGTTTCCAGCCTCTGGGAGAGGTGATCAAGATGTGGGGCCGTGTGCCCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 90 bp | GCTGCTGCTGCTGCTGCTGCTGCCGCTGTTGGCTGGCTTTCTGCTTaGCCCTCCGCTCCAGGAATTGTTTGGCAAATTCTTTGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAAAAAVGWLSA*PSAPGIVWQILWLP Trigger: TGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 90 bp | CAGCAACTTCTCTTCCTCTTCTGTCTTTTTGCGAACAGGTCGGCCTaGCAGGTGGCTGTACGAGTCACTGAGAGACGGGCTGCTCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: QQLLFLFCLFANRSA*QVAVRVTERRAAPT Trigger: AGTCGGAGCAGCCCGTCTCTCAGTGACTCGTACAGCCACCTGTCAGGCCGACCTGTTCGCAAAAAGACAGAAGAGGAAGAGAAGTTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 90 bp | AGGAACGAATATAATCATGGACATCGTAAGGGGACTCCACCTCCTTaGGGATGGCGACAGCCATGGGAACGTCTAGGCTGCCCGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RNEYNHGHRKGTPPP*GWRQPWERLGCPQC Trigger: GCACTGCGGGCAGCCTAGACGTTCCCATGGCTGTCGCCATCCTCAAGGAGGTGGAGTCCCCTTACGATGTCCATGATTATATTCGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAGTGCATGCTCCTTCCTaGGGCCAGCCCCTCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTVHAPS*GQPLPP Trigger: AGGAGGGAGGGGCTGGCCCAAGGAAGGAGCATGCAC...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACTGCTGCCCCCACTCTaGTCTGGCCCGCCCCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTLLPPL*SGPPHS Trigger: ACTATGGGGCGGGCCAGACAAGAGTGGGGGCAGCAG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACAACACGGCCCCACATCTaGATCACCTCTCCCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTTRPHI*ITSPRG Trigger: GCCTCTGGGAGAGGTGATCAAGATGTGGGGCCGTGT...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATCTGTCATCCCAGCTTaGGCTTCGCTGGATCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSVIPA*ASLDLP Trigger: CGGGAGATCCAGCGAAGCCAAAGCTGGGATGACAGA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATCGGGGAGCCCATCCTaGTCATCTTCAAAGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTSGSPS*SSSKPS Trigger: CGATGGCTTTGAAGATGACAAGGATGGGCTCCCCGA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACAGGGTGTGCAGCATTaGCTCACACCACTGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTQGVQH*LTPLRE Trigger: TTCACGCAGTGGTGTGAGCAAATGCTGCACACCCTG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACATGTTTGGCAAATTCTTaGGCTTCCAGCGTGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTCLANS*ASSVSP Trigger: GGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACA...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTATTAGGGAAGTCACACAGGGTAGAGGTAGGGTAAACTGGGATACACCTCCGCTCCAGGAATaGTTTGGCAAATTCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGIREVTQGRGRVNWDTPPLQE*FGKFFG Trigger: GCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGG...TGTATCCCAGTTTACCCTACCTCTACCCTGTGTGACTTCCCTAATACCCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | AGCAGCTGTCACCACGGCCTCGCCCTCGGCTCCGAGTaGTGCCCCTGCCACGGGAGGTGGCAGGCAAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCHHGLALGSE*CPCHGRWQAKG Trigger: CCCCTTTGCCTGCCACCTCCCGTGGCAGGGGCAGCACTCGGAGCCGAGGGCGAGGCCGTGGTGACAGCTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS TCA 72 bp | GCCGCAGCCAGCTCCTGCTGCTTCTTCAGCCGCTCCTaGTCCATGTTGCCCAGCAGCGGGGGTGGCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAASSCCFFSRS*SMLPSSGGGEG Trigger: GCCCTCGCCACCCCCGCTGCTGGGCAACATGGATCAGGAGCGGCTGAAGAAGCAGCAGGAGCTGGCTGCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | GTGGTTGGGGGCCTGGGCCCGCAGAGGCTCCCGCGGTaGCGCCTGCTTGTGCAGTTGGCGCTCACTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VVGGLGPQRLPR*RLLVQLALTFH Trigger: ATGGAAAGTGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTGCGGGCCCAGGCCCCCAACCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 90 bp | TGGTTGGGGGCCTGGGCCCGCAGAGGCTCCCGCGGTGCCGCCTGCTaGTGCAGTTGGCGCTCACTTTCCATCTGCAGCTCCAGCAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: WLGAWARRGSRGAAC*CSWRSLSICSSSRV Trigger: GACTCTGCTGGAGCTGCAGATGGAAAGTGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTGCGGGCCCAGGCCCCCAACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | TGGCGGAGGCCCTGGGTTTGCATGGCAGCGGTGAACTaGTCCTCCTCCAGGGAGCTGTCCTGCAGGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WRRPWVCMAAVN*SSSRELSCREA Trigger: GGCCTCCCTGCAGGACAGCTCCCTGGAGGAGGAGCAGTTCACCGCTGCCATGCAAACCCAGGGCCTCCGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | GCTCCTGCTGCTTCTTCAGCCGCTCCTGATCCATGTTaGCCAGCAGCGGGGGTGGCGAGGGCCCTGGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: APAASSAAPDPC*PAAGVARALGQ Trigger: TTGCCCCAGGGCCCTCGCCACCCCCGCTGCTGGGCAACATGGATCAGGAGCGGCTGAAGAAGCAGCAGGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | CTGCTGCTGCTGCGGCGGCGTCAGGTCCCCCATAGCTaGCTTTTCCCGGAGCGTCGTACACTGCGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLLRRRQVPHS*LFPERRTLREL Trigger: CAGCTCCCGCAGTGTACGACGCTCCGGGAAAAGGCAGCTATGGGGGACCTGACGCCGCCGCAGCAGCAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | TGGGCCCGCAGAGGCTCCCGCGGTGCCGCCTGCTTGTaGAGTTGGCGCTCACTTTCCATCTGCAGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WARRGSRGAACL*SWRSLSICSSS Trigger: GCTGGAGCTGCAGATGGAAAGTGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTGCGGGCCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | GTCTGTAGGGAGGTGCTGCTCAGCCAGGCCTCCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VCREVLLSQASC*CCCCCCCCCCR Trigger: GCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CCA 72 bp | GCAGCTCCAGCAGAGTCTTCATGGACAGGCCCTGCTTaGCTAGGCCAGCCCAGAGCGGGGGTGGGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAPAESSWTGPA*LGQPRAGVGSW Trigger: CCAGCTCCCCACCCCCGCTCTGGGCTGGCCTAGCCAAGCAGGGCCTGTCCATGAAGACTCTGCTGGAGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 72 bp | CAGAGTCCCAGGTTGCCACCGCTGCTGCCCCCACTCTaGTCTGGCCCGCCCCATAGTGGCCCAGCCTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QSPRLPPLLPPL*SGPPHSGPASD Trigger: GTCTGAGGCTGGGCCACTATGGGGCGGGCCAGACAAGAGTGGGGGCAGCAGCGGTGGCAACCTGGGACTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | GCAGTGGCAGCTGTGGAGTGGCGGAGGCCCTGGGTTTaGATGGCAGCGGTGAACTGCTCCTCCTCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AVAAVEWRRPWV*MAAVNCSSSRE Trigger: CTCCCTGGAGGAGGAGCAGTTCACCGCTGCCATGCAAACCCAGGGCCTCCGCCACTCCACAGCTGCCACTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | AGCTGGCGGCTGCCAACCAGCTGCAGAAAGTGCTGGTaGTGCAGCTGCTGGTACAGGGCTGCCGCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWRLPTSCRKCW*CSCWYRAAAAS Trigger: GCTGGCTGCGGCAGCCCTGTACCAGCAGCTGCAGCACCAGCACTTTCTGCAGCTGGTTGGCAGCCGCCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | AGAGCCTGGAGCTGCTGCAGGAACGTAGTGAGCTGCTaGTGCTGCGGCGGCGTCAGGTCCCCCATAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RAWSCCRNVVSC*CCGGVRSPIAA Trigger: GGCAGCTATGGGGGACCTGACGCCGCCGCAGCAGCAGCAGCTCACTACGTTCCTGCAGCAGCTCCAGGCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | CTGCTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCCGCTGTTGGCTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSQASCCCCCC*CCCCCRCWLAF Trigger: GAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | GCTGTCTGTAGGGAGGTGCTGCTCAGCCAGGCCTCCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVCREVLLSQAS*CCCCCCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 90 bp | CGACTGCTCTTCAGGCCCAGGCTTCGGGCCAGGCTCCCGCCACTCTaGAGAGTATCTTCCCAGAGTCCCAGGTTGCCACCGCTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLLFRPRLRARLPPL*RVSSQSPRLPPLLP Trigger: GGGCAGCAGCGGTGGCAACCTGGGACTCTGGGAAGATACTCTCAAGAGTGGCGGGAGCCTGGCCCGAAGCCTGGGCCTGAAGAGCAGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 72 bp | TCAGGCCCAGGCTTCGGGCCAGGCTCCCGCCACTCTTaGGAGTATCTTCCCAGAGTCCCAGGTTGCCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: SGPGFGPGSRHS*EYLPRVPGCHR Trigger: GCGGTGGCAACCTGGGACTCTGGGAAGATACTCTCAAGAGTGGCGGGAGCCTGGCCCGAAGCCTGGGCCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | CACCATCTCGCCGGGGTCCCGCCCCAAGTCTCCAGCTaGCATCATCCTCTTGCTCCTCTCGAAGTGAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HHLAGVPPQVSS*HHPLAPLEVSA Trigger: GGCGCTCACTTCGAGAGGAGCAAGAGGATGATGGCAGCTGGAGACTTGGGGCGGGACCCCGGCGAGATGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS GCA 72 bp | GCCTGGAGCTGCTGCAGGAACGTAGTGAGCTGCTGCTaGTGCGGCGGCGTCAGGTCCCCCATAGCTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AWSCCRNVVSCC*CGGVRSPIAAF Trigger: AAAGGCAGCTATGGGGGACCTGACGCCGCCGCAGCAGCAGCAGCTCACTACGTTCCTGCAGCAGCTCCAGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | GCAGTGCTCAGGGTGTGCAGCATTTGCTCACACCACTaGGTGAAGCCGTCCTGGGGCCGAGGGATGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVLRVCSICSHH*VKPSWGRGMPC Trigger: GCAGGGCATCCCTCGGCCCCAGGACGGCTTCACGCAGTGGTGTGAGCAAATGCTGCACACCCTGAGCACTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CCA 72 bp | GCTGCCTTTTCCCGGAGCGTCGTACACTGCGGGAGCTaGCGGCTGCCAACCAGCTGCAGAAAGTGCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AAFSRSVVHCGS*RLPTSCRKCWC Trigger: GCACCAGCACTTTCTGCAGCTGGTTGGCAGCCGCCAGCTCCCGCAGTGTACGACGCTCCGGGAAAAGGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 72 bp | CCGCAGAGGCTCCCGCGGTGCCGCCTGCTTGTGCAGTaGGCGCTCACTTTCCATCTGCAGCTCCAGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PQRLPRCRLLVQ*ALTFHLQLQQS Trigger: ACTCTGCTGGAGCTGCAGATGGAAAGTGAGCGCCAACTGCACAAGCAGGCGGCACCGCGGGAGCCTCTGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 90 bp | GCCAGGCTCCCGCCACTCTTGAGAGTATCTTCCCAGAGTCCCAGGTaGCCACCGCTGCTGCCCCCACTCTTGTCTGGCCCGCCCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARLPPLLRVSSQSPR*PPLLPPLLSGPPHS Trigger: ACTATGGGGCGGGCCAGACAAGAGTGGGGGCAGCAGCGGTGGCAACCTGGGACTCTGGGAAGATACTCTCAAGAGTGGCGGGAGCCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS TCA 72 bp | TCTTCAAAGCCATCGAGCCCCCGGCATCTCCGGAGGTaGGAGTTGCCGCCCCCAACCCGCCCATCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSKPSSPRHLRR*ELPPPTRPSSS Trigger: TGAAGAGGATGGGCGGGTTGGGGGCGGCAACTCTCACCTCCGGAGATGCCGGGGGCTCGATGGCTTTGAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS TCA 72 bp | AGGGCCCTGGGGCAAAGGGCACACGGCCCCACATCTTaGTCACCTCTCCCAGAGGCTGGAAACCCTCATCGC | + |
|
Preference number: 6 (lower is better) Translates to: RALGQRAHGPTS*SPLPEAGNPHR Trigger: GCGATGAGGGTTTCCAGCCTCTGGGAGAGGTGATCAAGATGTGGGGCCGTGTGCCCTTTGCCCCAGGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS TCA 72 bp | CCCTCCCCAGGGCCCAGTTTGGTGCTGTGGTTGGCCTaGAAGGCTGTCTGTAGGGAGGTGCTGCTCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSPGPSLVLWLA*KAVCREVLLSQ Trigger: CTGGCTGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCACAGCACCAAACTGGGCCCTGGGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | TTTCCCGGAGCGTCGTACACTGCGGGAGCTGGCGGCTaGCAACCAGCTGCAGAAAGTGCTGGTGCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FPGASYTAGAGG*QPAAESAGAAA Trigger: AGCTGCAGCACCAGCACTTTCTGCAGCTGGTTGGCAGCCGCCAGCTCCCGCAGTGTACGACGCTCCGGGAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | TGGAGCTGCTGCAGGAACGTAGTGAGCTGCTGCTGCTaGGGCGGCGTCAGGTCCCCCATAGCTGCCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WSCCRNVVSCCC*GGVRSPIAAFS Trigger: GGAAAAGGCAGCTATGGGGGACCTGACGCCGCCGCAGCAGCAGCAGCTCACTACGTTCCTGCAGCAGCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | GGTCGGAGTGAAGCATCAGTGCCCGCCTTTTGGCCTTaGTGCCCTCCCCAGGGCCCAGTTTGGTGCTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRSEASVPAFWP*CPPQGPVWCCG Trigger: ACCACAGCACCAAACTGGGCCCTGGGGAGGGCAGCAAGGCCAAAAGGCGGGCACTGATGCTTCACTCCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CCA 72 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGTTaGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCCCRC*LAFCLALRSRN Trigger: ATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 72 bp | GAGGGCCCTGGGGCAAAGGGCACACGGCCCCACATCTaGATCACCTCTCCCAGAGGCTGGAAACCCTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: EGPGAKGTRPHI*ITSPRGWKPSS Trigger: CGATGAGGGTTTCCAGCCTCTGGGAGAGGTGATCAAGATGTGGGGCCGTGTGCCCTTTGCCCCAGGGCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 72 bp | CCGCCACTCTTGAGAGTATCTTCCCAGAGTCCCAGGTaGCCACCGCTGCTGCCCCCACTCTTGTCTGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPLLRVSSQSPR*PPLLPPLLSGP Trigger: CGGGCCAGACAAGAGTGGGGGCAGCAGCGGTGGCAACCTGGGACTCTGGGAAGATACTCTCAAGAGTGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 72 bp | TTCAGGCCCAGGCTTCGGGCCAGGCTCCCGCCACTCTaGAGAGTATCTTCCCAGAGTCCCAGGTTGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: FRPRLRARLPPL*RVSSQSPRLPP Trigger: CGGTGGCAACCTGGGACTCTGGGAAGATACTCTCAAGAGTGGCGGGAGCCTGGCCCGAAGCCTGGGCCTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 90 bp | CTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGTaGGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLLLPL*AGFLLGPPLQELFG Trigger: GCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 72 bp | CCGTGCAGGGAGTACCCCAAGATGCTAGGGTCGGAGTaGAGCATCAGTGCCCGCCTTTTGGCCTTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PCREYPKMLGSE*SISARLLALLP Trigger: GGGCAGCAAGGCCAAAAGGCGGGCACTGATGCTTCACTCCGACCCTAGCATCTTGGGGTACTCCCTGCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | TGGTCTCCACCTCTGGGGGTTTTGAGAGCCTGGAGCTaGTGCAGGAACGTAGTGAGCTGCTGCTGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: WSPPLGVLRAWS*CRNVVSCCCCG Trigger: GCCGCAGCAGCAGCAGCTCACTACGTTCCTGCAGCAGCTCCAGGCTCTCAAAACCCCCAGAGGTGGAGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | TGTGGTTGGCCTGAAAGGCTGTCTGTAGGGAGGTGCTaGTCAGCCAGGCCTCCTGCTGCTGCTGCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CGWPERLSVGRC*SARPPAAAAAA Trigger: AGCAGCAGCAGCAGCAGCAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 72 bp | CGCCTCTCGCCTCTGTCATCCCAGCTTTGGCTTCGCTaGATCTCCCGAGGATTCCTTCCGAAGGCCCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: RLSPLSSQLWLR*ISRGFLPKAPS Trigger: CGATGGGGCCTTCGGAAGGAATCCTCGGGAGATCCAGCGAAGCCAAAGCTGGGATGACAGAGGCGAGAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS CCA 72 bp | ACCGACAAGGACCGGCTCATCGTCGGGAGCAGGTTCTaGTCTCCACCTCTGGGGGTTTTGAGAGCCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TDKDRLIVGSRF*SPPLGVLRAWS Trigger: GCTCCAGGCTCTCAAAACCCCCAGAGGTGGAGACCAGAACCTGCTCCCGACGATGAGCCGGTCCTTGTCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 72 bp | GCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGTTGGCTaGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAAAAAAVG*LSAWPSAPGIV Trigger: AACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 90 bp | GCAGTGAAGACGGTGAGCTGGAGTTCTCTGGAGGCGGCAATGGGGTaGCCTCCTTCCCTCCTGCCTCAGGCCTCTCTTCATCCACCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AVKTVSWSSLEAAMG*PPSLLPQASLHPPL Trigger: AAGGGGTGGATGAAGAGAGGCCTGAGGCAGGAGGGAAGGAGGCAACCCCATTGCCGCCTCCAGAGAACTCCAGCTCACCGTCTTCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | ATGGGAACGTCTAGGCTGCCCGCAGTGCTCAGGGTGTaGAGCATTTGCTCACACCACTGCGTGAAGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MGTSRLPAVLRV*SICSHHCVKPS Trigger: GGACGGCTTCACGCAGTGGTGTGAGCAAATGCTGCACACCCTGAGCACTGCGGGCAGCCTAGACGTTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 72 bp | AGAGAGGACCCAAGGCTGGCAGTGAAGACGGTGAGCTaGAGTTCTCTGGAGGCGGCAATGGGGTTGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: REDPRLAVKTVS*SSLEAAMGLPP Trigger: AGGAGGCAACCCCATTGCCGCCTCCAGAGAACTCCAGCTCACCGTCTTCACTGCCAGCCTTGGGTCCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 72 bp | TCCTCATCCTCCAGGCACCACTCGGGGAGCCCATCCTaGTCATCTTCAAAGCCATCGAGCCCCCGGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSRHHSGSPS*SSSKPSSPRHL Trigger: GAGATGCCGGGGGCTCGATGGCTTTGAAGATGACAAGGATGGGCTCCCCGAGTGGTGCCTGGAGGATGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 90 bp | CCGAGGATTCCTTCCGAAGGCCCCATCGCCTTCCTCAATGCTTCTTaGGTAAAAGCAGCTGTCACCACGGCCTCGCCCTCGGCTCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PRIPSEGPIAFLNAS*VKAAVTTASPSAPS Trigger: ACTCGGAGCCGAGGGCGAGGCCGTGGTGACAGCTGCTTTTACCAAAGAAGCATTGAGGAAGGCGATGGGGCCTTCGGAAGGAATCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS CAA 90 bp | CAGCAGGAGGCAGCTCTTTCTCCACTGCCTCACCACCCTCCTCATTaGTCGTCCAGAGAGGACCCAAGGCTGGCAGTGAAGACGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QQEAALSPLPHHPPH*SSREDPRLAVKTVS Trigger: GCTCACCGTCTTCACTGCCAGCCTTGGGTCCTCTCTGGACGACAAATGAGGAGGGTGGTGAGGCAGTGGAGAAAGAGCTGCCTCCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | GAGGGCCAGCATCTCCTCTCGCCCATAGCGGTAATCTaGCAGCTTGTATTTGGGCATGGCAGGAGATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGQHLLSPIAVI*QLVFGHGRRWG Trigger: CCCCCATCTCCTGCCATGCCCAAATACAAGCTGGCAGATTACCGCTATGGGCGAGAGGAGATGCTGGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS GCA 72 bp | CGAAGTGAGCGCCAATTCTCACTGTCTGAGCGTGCATaGTCCTTCCTTGGGCCAGCCCCTCCCTCCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSERQFSLSERA*SFLGPAPPSSK Trigger: CTTTGAGGAGGGAGGGGCTGGCCCAAGGAAGGAGCATGCACGCTCAGACAGTGAGAATTGGCGCTCACTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS GCA 72 bp | GCAGCTTCAGCAACAATTCCTGCTGCCGTACCTGCTTaGGCCGAAAGAGCTCCTCCTCTTCCTGCCGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AASATIPAAVPA*AERAPPLPAVA Trigger: AGCGACGGCAGGAAGAGGAGGAGCTCTTTCGGCGCAAGCAGGTACGGCAGCAGGAATTGTTGCTGAAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS GCA 72 bp | GGTGCAGGGGGCACAGGGACATTCGTCGCTTGCTGCTaGTGTAGCAGCTTCAGCAACAATTCCTGCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GAGGTGTFVACC*CSSFSNNSCCR Trigger: ACGGCAGCAGGAATTGTTGCTGAAGCTGCTACAGCAGCAGCAAGCGACGAATGTCCCTGTGCCCCCTGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CCA 72 bp | CTCCTGGGTCGTGAAAGGGCCTTGGATTTCCCCCTGTaGGTCCTTGTAGAACCACTTTCGGGCAGCGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLGRERALDFPL*VLVEPLSGSAM Trigger: CATGGCGCTGCCCGAAAGTGGTTCTACAAGGACCCACAGGGGGAAATCCAAGGCCCTTTCACGACCCAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 72 bp | CCTTCCGAAGGCCCCATCGCCTTCCTCAATGCTTCTTaGGTAAAAGCAGCTGTCACCACGGCCTCGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PSEGPIAFLNAS*VKAAVTTASPS Trigger: CGAGGGCGAGGCCGTGGTGACAGCTGCTTTTACCAAAGAAGCATTGAGGAAGGCGATGGGGCCTTCGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
||
| CDS CAA 72 bp | AGCAGCTTCAGCAACAATTCCTGCTGCCGTACCTGCTaGCGCCGAAAGAGCTCCTCCTCTTCCTGCCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFSNNSCCRTC*RRKSSSSSCRR Trigger: GCGACGGCAGGAAGAGGAGGAGCTCTTTCGGCGCAAGCAGGTACGGCAGCAGGAATTGTTGCTGAAGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 90 bp | TGCTGCTGTAGCAGCTTCAGCAACAATTCCTGCTGCCGTACCTGCTaGCGCCGAAAGAGCTCCTCCTCTTCCTGCCGTCGCTTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCCSSFSNNSCCRTC*RRKSSSSSCRRFCS Trigger: GGAGCAGAAGCGACGGCAGGAAGAGGAGGAGCTCTTTCGGCGCAAGCAGGTACGGCAGCAGGAATTGTTGCTGAAGCTGCTACAGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 90 bp | CGCTGTTGGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTaGGCAAATTCTTTGGCTTCCAGCGTGTCCCCCAGGCAGGAACGA | + |
|
Preference number: 6 (lower is better) Translates to: RCWLAFCLALRSRNC*ANSLASSVSPRQER Trigger: TCGTTCCTGCCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CAA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCCGCTGTTGGCTGGCTTTCTGCTaGGCCCTCCGCTCCAGGAATTGTTTGGCAAATTCTTTGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCRCWLAFC*ALRSRNCLANSLAS Trigger: GGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS TCA 72 bp | CCCGTCGTTTGCGCTCCTCCTCCTCCCGCTTCGCCCTaGGCTCCACTTCTCTGCGCTCTTGAAATTTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVVCAPPPPASP*APLLCALEIYA Trigger: AGCATAAATTTCAAGAGCGCAGAGAAGTGGAGCTCAGGGCGAAGCGGGAGGAGGAGGAGCGCAAACGACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS GCA 72 bp | TCCCTCCTCAAAGCCAGACCGTACTCCATCCCTCCTTaGAGGCTTCTCAAACCGCCTCTCGCCTCTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLLKARPYSIPP*RLLKPPLASVI Trigger: GATGACAGAGGCGAGAGGCGGTTTGAGAAGCCTGCAAGGAGGGATGGAGTACGGTCTGGCTTTGAGGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
||
| CDS CAA 72 bp | GCAGCTCTTTCTCCACTGCCTCACCACCCTCCTCATTaGTCGTCCAGAGAGGACCCAAGGCTGGCAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AALSPLPHHPPH*SSREDPRLAVK Trigger: CTTCACTGCCAGCCTTGGGTCCTCTCTGGACGACAAATGAGGAGGGTGGTGAGGCAGTGGAGAAAGAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS TCA 72 bp | CCTTGTCCTGTAGTTCCTCCGGGACCTTGTTCTCCTTaGCATAGAGGGCCAGCATCTCCTCTCGCCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: PCPVVPPGPCSP*HRGPASPLAHS Trigger: GCTATGGGCGAGAGGAGATGCTGGCCCTCTATGTCAAGGAGAACAAGGTCCCGGAGGAACTACAGGACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
||
| CDS GCA 72 bp | TGTAGCAGCTTCAGCAACAATTCCTGCTGCCGTACCTaGTTGCGCCGAAAGAGCTCCTCCTCTTCCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CSSFSNNSCCRT*LRRKSSSSSCR Trigger: ACGGCAGGAAGAGGAGGAGCTCTTTCGGCGCAAGCAGGTACGGCAGCAGGAATTGTTGCTGAAGCTGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
||
| CDS CCA 72 bp | TTCTCAAACCGCCTCTCGCCTCTGTCATCCCAGCTTTaGCTTCGCTGGATCTCCCGAGGATTCCTTCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FSNRLSPLSSQL*LRWISRGFLPK Trigger: CTTCGGAAGGAATCCTCGGGAGATCCAGCGAAGCCAAAGCTGGGATGACAGAGGCGAGAGGCGGTTTGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS CCA 72 bp | TCTTCTGTCTTTTTGCGAACAGGTCGGCCTGACAGGTaGCTGTACGAGTCACTGAGAGACGGGCTGCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: SSVFLRTGRPDR*LYESLRDGLLR Trigger: TCGGAGCAGCCCGTCTCTCAGTGACTCGTACAGCCACCTGTCAGGCCGACCTGTTCGCAAAAAGACAGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 72 bp | CTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTaGGCAAATTCTTTGGCTTCCAGCGTGTCCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LAFCLALRSRNC*ANSLASSVSPR Trigger: CCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS TCA 72 bp | CTCTTCCTCTTCTGTCTTTTTGCGAACAGGTCGGCCTaGCAGGTGGCTGTACGAGTCACTGAGAGACGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LFLFCLFANRSA*QVAVRVTERRA Trigger: AGCCCGTCTCTCAGTGACTCGTACAGCCACCTGTCAGGCCGACCTGTTCGCAAAAAGACAGAAGAGGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 72 bp | TTGGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATaGTTTGGCAAATTCTTTGGCTTCCAGCGTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LAGFLLGPPLQE*FGKFFGFQRVP Trigger: GGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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| CDS CAA 72 bp | TGCAGCGGTTCCTCTTGTAACACTGCAGCAAACTCCTaGTCCTGTAGTTCCTCCGGGACCTTGTTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: CSGSSCNTAANS*SCSSSGTLFSL Trigger: CAAGGAGAACAAGGTCCCGGAGGAACTACAGGACAAGGAGTTTGCTGCAGTGTTACAAGAGGAACCGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031727.10 ENSMUST00000197624.5 |
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| CDS TCA 72 bp | TTATGCTGCAGTTGGAGCTGTTCTAGAATTGGACCCTaGGTCGAAGAGTTAATTGGTATGTCCCAAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: LCCSWSCSRIGP*VEELIGMSQRL Trigger: CAGTCTTTGGGACATACCAATTAACTCTTCGACTCAGGGTCCAATTCTAGAACAGCTCCAACTGCAGCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031727.10 |
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