Pregenerated sensors for GID4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018415Ensembl transcript IDs: ENSMUST00000070681.7, ENSMUST00000139477.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCTTAGACTGACCCTTTCTCCTGGGCTCAGGCTTCTGAGCAGCTaGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: HLRLTLSPGLRLLSS*ASRCTAVPRLLLKG Trigger: ACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCCAGCTGCTCAGAAGCCTGAGCCCAGGAGAAAGGGTCAGTCTAAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR TCA 90 bp | ACAGATGGTGACCACAATGCCACTGAGAGGAAGGAGGGTGGGAGGTaGACAGCTCCCTCTGCCTGCCTGCAGGTTGGCCATGCTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: TDGDHNATERKEGGR*TAPSACLQVGHAPW Trigger: CCAAGGAGCATGGCCAACCTGCAGGCAGGCAGAGGGAGCTGTTCACCTCCCACCCTCCTTCCTCTCAGTGGCATTGTGGTCACCATCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CCA 90 bp | CCTTGGGCTACCAAACAAGCAACTGAGGAAGGAGTAGGGCCTGGGTaGAGACCACTGAGCACCAAGGCTAAGGTGACCCAGGAGCTGACC | + |
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Preference number: 1 (lower is better) Translates to: PWATKQATEEGVGPG*RPLSTKAKVTQELT Trigger: GGTCAGCTCCTGGGTCACCTTAGCCTTGGTGCTCAGTGGTCTCCACCCAGGCCCTACTCCTTCCTCAGTTGCTTGTTTGGTAGCCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR GCA 90 bp | ATACAGCCAGGACTGGGCAGCTTCATCATGCCAGCTAGAGGAGTCTaGTGTGCCAGCAGTGCACACATCTATAGCCCCATCGGCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: IQPGLGSFIMPARGV*CASSAHIYSPIGSG Trigger: TCCTGAGCCGATGGGGCTATAGATGTGTGCACTGCTGGCACAGCAGACTCCTCTAGCTGGCATGATGAAGCTGCCCAGTCCTGGCTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
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| 3UTR CCA 90 bp | TGCTGGGCCCAGGCAACTCACATAGAGCTCTGGGGCACAAGATGCTaGGCTCTCCCTTTCCTTGGGCTACCAAACAAGCAACTGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: CWAQATHIELWGTRC*ALPFLGLPNKQLRK Trigger: CTTCCTCAGTTGCTTGTTTGGTAGCCCAAGGAAAGGGAGAGCCCAGCATCTTGTGCCCCAGAGCTCTATGTGAGTTGCCTGGGCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR GCA 90 bp | ATATGCTGGGCCCAGGCAACTCACATAGAGCTCTGGGGCACAAGATaGTGGGCTCTCCCTTTCCTTGGGCTACCAAACAAGCAACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: ICWAQATHIELWGTR*WALPFLGLPNKQLR Trigger: CCTCAGTTGCTTGTTTGGTAGCCCAAGGAAAGGGAGAGCCCAGCATCTTGTGCCCCAGAGCTCTATGTGAGTTGCCTGGGCCCAGCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CCA 90 bp | CCACTGCTGAATGATACCTGCCCAGCACACAATGGTTCAATAGCATaGTGGAAAGCCAGAGGAGCAGGTGCTGCAGGGAAAAGCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PLLNDTCPAHNGSIA*WKARGAGAAGKSQQ Trigger: CTGCTGGCTTTTCCCTGCAGCACCTGCTCCTCTGGCTTTCCACCATGCTATTGAACCATTGTGTGCTGGGCAGGTATCATTCAGCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR TCA 90 bp | CCTTTTTCCAGCACTGGAAATGGAAGCCAGGTCCTTCCTCATATGTaGCAAGCTAGTGCTTGGTCAGCTGCACTCCCAGCCCTGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: PFSSTGNGSQVLPHM*QASAWSAALPALML Trigger: CAGCATCAGGGCTGGGAGTGCAGCTGACCAAGCACTAGCTTGTCACATATGAGGAAGGACCTGGCTTCCATTTCCAGTGCTGGAAAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CCA 90 bp | CTTGACGGATTTAAAATGAACTCAAGGGTGGGATACAGCCAGGACTaGGCAGCTTCATCATGCCAGCTAGAGGAGTCTGCTGTGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LDGFKMNSRVGYSQD*AASSCQLEESAVPA Trigger: TGCTGGCACAGCAGACTCCTCTAGCTGGCATGATGAAGCTGCCCAGTCCTGGCTGTATCCCACCCTTGAGTTCATTTTAAATCCGTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
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| 3UTR CCA 90 bp | GCTAGTCTTGCATTGTTAACACACAGGGCCCTACAAGACATCAACTaGAATCAAAGGTCAATGAGGCCCACCAGGGACCCCATCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: ASLALLTHRALQDIN*NQRSMRPTRDPISS Trigger: AGATGAGATGGGGTCCCTGGTGGGCCTCATTGACCTTTGATTCCAGTTGATGTCTTGTAGGGCCCTGTGTGTTAACAATGCAAGACTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR GCA 90 bp | ACACTTTGGCACATGAGCCTCGAGTTATTTGAGTGCATTTCTTCCTaGCCACGCCATGACAACATTTCAGTCATCCTTTCCGGAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: TLWHMSLELFECISS*PRHDNISVILSGEW Trigger: CCATTCTCCGGAAAGGATGACTGAAATGTTGTCATGGCGTGGGCAGGAAGAAATGCACTCAAATAACTCGAGGCTCATGTGCCAAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR TCA 90 bp | TTGAAGAGAGATGATCAGTTGAGCCCAGGAGTTTTGAGAGCAGCCTaGGAAACTAGAGAGAACCTCTCCTGGTTCTGGCAGGTACATAAT | + |
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Preference number: 1 (lower is better) Translates to: LKRDDQLSPGVLRAA*ETRENLSWFWQVHN Trigger: ATTATGTACCTGCCAGAACCAGGAGAGGTTCTCTCTAGTTTCTCAGGCTGCTCTCAAAACTCCTGGGCTCAACTGATCATCTCTCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
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| 3UTR CCA 90 bp | ATGAAGTCTGCTCGTGAACAAACAGGAACACACCTCTCCTGGTTCTaGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCCAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: MKSAREQTGTHLSWF*QVHNFLAKLFVAKF Trigger: GAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAGGTGTGTTCCTGTTTGTTCACGAGCAGACTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CCA 90 bp | TTTCTGATGAAGTCTGCTCGTGAACAAACAGGAACACACCTCTCCTaGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: FLMKSAREQTGTHLS*FWQVHNFLAKLFVA Trigger: GGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAGGTGTGTTCCTGTTTGTTCACGAGCAGACTTCATCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CCA 90 bp | AAAACCAAACCAAACCAAACCAAACCACTCCCCTCTCTCACACTTTaGCACATGAGCCTCGAGTTATTTGAGTGCATTTCTTCCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: KTKPNQTKPLPSLTL*HMSLELFECISSCP Trigger: TGGGCAGGAAGAAATGCACTCAAATAACTCGAGGCTCATGTGCCAAAGTGTGAGAGAGGGGAGTGGTTTGGTTTGGTTTGGTTTGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR GCA 90 bp | GGCTATGGATATTGCCAAGTACCTGCTGGTTTCTTTCCCCACTTCTaGTCTCTTAAGGTTCCCAGATATTCAGTATTAGTAACACACAGC | + |
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Preference number: 1 (lower is better) Translates to: GYGYCQVPAGFFPHF*SLKVPRYSVLVTHS Trigger: GCTGTGTGTTACTAATACTGAATATCTGGGAACCTTAAGAGAGCAGAAGTGGGGAAAGAAACCAGCAGGTACTTGGCAATATCCATAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CCA 90 bp | TCAGCCCTAGCGATGGATGTGGATTCTTTTCTTCTACCTAAGTCTTaGGATGATGTATTGTTATGGTTTCTGAGCCCCAGCTTTACTGAC | + |
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Preference number: 1 (lower is better) Translates to: SALAMDVDSFLLPKS*DDVLLWFLSPSFTD Trigger: GTCAGTAAAGCTGGGGCTCAGAAACCATAACAATACATCATCCCAAGACTTAGGTAGAAGAAAAGAATCCACATCCATCGCTAGGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR TCA 90 bp | TTATTTAGTATTGCCCTCAAGTTCAGAAGTTTGGAGCAAATGTACTaGGAAAGCAGTTTGGGATCTACTCCTACCAGGGATCTGGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: LFSIALKFRSLEQMY*ESSLGSTPTRDLEA Trigger: GGCTTCCAGATCCCTGGTAGGAGTAGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAAACTTCTGAACTTGAGGGCAATACTAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACGGAAGGAGTAGGGCCTaGGTGGAGACCACTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GPRGALPYPGCFSRVRNHGRSRA*VETTEH Trigger: GTGCTCAGTGGTCTCCACCCAGGCCCTACTCCTTCC...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACGGAATCAAAGGTCAATaGGGCCCACCAGGGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPRGALPYPGCFSRVRNHGIKGQ*GPPGTP Trigger: TGGGGTCCCTGGTGGGCCTCATTGACCTTTGATTCC...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CAA 90 bp | CCACTGAGCACCAAGGCTAAGGTGACCCAGGAGCTGACCTTCCACTaGGCTAGAGGCAGGCCGAGGAAAGATGGCATTTCAGTGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: PLSTKAKVTQELTFH*ARGRPRKDGISVMQ Trigger: CTGCATCACTGAAATGCCATCTTTCCTCGGCCTGCCTCTAGCCAAGTGGAAGGTCAGCTCCTGGGTCACCTTAGCCTTGGTGCTCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CAA 90 bp | GGAAGGAGGGTGGGAGGTGAACAGCTCCCTCTGCCTGCCTGCAGGTaGGCCATGCTCCTTGGATCCTGTAGGTTAACATTCATGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GRRVGGEQLPLPACR*AMLLGSCRLTFMLS Trigger: AGAAAGCATGAATGTTAACCTACAGGATCCAAGGAGCATGGCCAACCTGCAGGCAGGCAGAGGGAGCTGTTCACCTCCCACCCTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR GCA 90 bp | GACCCCATCTCATCTCATTGGTGGTATATGCTGGGCCCAGGCAACTCACATAGAGTGAACAGCTCCCTCTaGCTGCCTGCAGGTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: DPISSHWWYMLGPGNSHRVNSSL*LPAGWP Trigger: TGGCCAACCTGCAGGCAGGCAGAGGGAGCTGTTCAC...TCTATGTGAGTTGCCTGGGCCCAGCATATACCACCAATGAGATGAGATGGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACTTGGAGCAAATGTACTaGGAAAGCAGTTTGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: GPRGALPYPGCFSRVRNHLEQMY*ESSLGS Trigger: AGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAA...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGAGCAAATGTACTGAGAAAGCAGTTTGGGATCTACTCCTACCAGGGATCAAGGAGGGTGGGAGGTaGACAGCTCCCTCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VWSKCTEKAVWDLLLPGIKEGGR*TAPSAC Trigger: GCAGGCAGAGGGAGCTGTTCACCTCCCACCCTCCTT...GATCCCTGGTAGGAGTAGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGATCTGGAAGCCTTAAATTTAGTGATCCCCAACAGCAGGCCCAGAAAACCTGGGGCACAAGATGCTaGGCTCTCCCTTTCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QGSGSLKFSDPQQQAQKTWGTRC*ALPFLG Trigger: CCCAAGGAAAGGGAGAGCCCAGCATCTTGTGCCCCA...GGTTTTCTGGGCCTGCTGTTGGGGATCACTAAATTTAAGGCTTCCAGATCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACGTCCTGACAATATTGTaGACTACAACTGATGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: GPRGALPYPGCFSRVRNHVLTIL*TTTDAN Trigger: ATTGGCATCAGTTGTAGTCCACAATATTGTCAGGAC...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGAGCAAATGTACTGAGAAAGCAGTTTGGGATCTACTCCTACCAGGGATCCTCCCTCTGCCTGCCTaGAGGTTGGCCATGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VWSKCTEKAVWDLLLPGILPLPA*RLAMLL Trigger: AAGGAGCATGGCCAACCTGCAGGCAGGCAGAGGGAG...GATCCCTGGTAGGAGTAGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGGATCTGGAAGCCTTAAATTTAGTGATCCCCAACAGCAGGCCCAGAAAACCCTCTGGGGCACAAGATaGTGGGCTCTCCCTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QGSGSLKFSDPQQQAQKTLWGTR*WALPFL Trigger: AAGGAAAGGGAGAGCCCAGCATCTTGTGCCCCAGAG...GGTTTTCTGGGCCTGCTGTTGGGGATCACTAAATTTAAGGCTTCCAGATCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | CTACCCCTTGGTGTTCCCTTTTTCCAGCACTGGAAATGGAAGCCAGGTCCTTCCGGAACACACCTCTCCTaGTTCTGGCAGGTACATAAT | + |
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Preference number: 2 (lower is better) Translates to: LPLGVPFFQHWKWKPGPSGTHLS*FWQVHN Trigger: ATTATGTACCTGCCAGAACCAGGAGAGGTGTGTTCC...GGAAGGACCTGGCTTCCATTTCCAGTGCTGGAAAAAGGGAACACCAAGGGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CAA 90 bp | CAACAGCAGGCCCAGAAAACCCGACAGCCATGTGCTAGTCTTGCATaGTTAACACACAGGGCCCTACAAGACATCAACTGGAATCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QQQAQKTRQPCASLA*LTHRALQDINWNQR Trigger: CCTTTGATTCCAGTTGATGTCTTGTAGGGCCCTGTGTGTTAACAATGCAAGACTAGCACATGGCTGTCGGGTTTTCTGGGCCTGCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR GCA 90 bp | ATACAGCCAGGACTGGGCAGCTTCATCATGCCAGCTAGAGGAGTCTGCTGTGCCCGCAAAGCTCTTTGTTaGCAAGTTCAGTTTTATTTG | + |
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Preference number: 2 (lower is better) Translates to: IQPGLGSFIMPARGVCCARKALC*QVQFYL Trigger: CAAATAAAACTGAACTTGGCAACAAAGAGCTTTGCG...GGCACAGCAGACTCCTCTAGCTGGCATGATGAAGCTGCCCAGTCCTGGCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGACTTCTAAGCAGCAAGTCTTCAGGTAGGTCTGAAGTCTGTCTGCTAAAGGGCTCTCCCTTTCCTTaGGCTACCAAACAAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: GRLLSSKSSGRSEVCLLKGSPFP*ATKQAT Trigger: AGTTGCTTGTTTGGTAGCCCAAGGAAAGGGAGAGCC...CTTTAGCAGACAGACTTCAGACCTACCTGAAGACTTGCTGCTTAGAAGTCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GGCAGACTTCTAAGCAGCAAGTCTTCAGGTAGGTCTGAAGTCTGTCTGCTAAAGGGTTCAATAGCATGGTaGAAAGCCAGAGGAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GRLLSSKSSGRSEVCLLKGSIAW*KARGAG Trigger: ACCTGCTCCTCTGGCTTTCCACCATGCTATTGAACC...CTTTAGCAGACAGACTTCAGACCTACCTGAAGACTTGCTGCTTAGAAGTCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR TCA 90 bp | AATTCCCTGCTTCTGAAAGCAAAAGACATTGAGAAACCCCTTTGTTCCACTGGAGCCCTAGCTTCAGGGTaGCTCCATCCACTGCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: NSLLLKAKDIEKPLCSTGALASG*LHPLLN Trigger: ATTCAGCAGTGGATGGAGTCACCCTGAAGCTAGGGC...TCCAGTGGAACAAAGGGGTTTCTCAATGTCTTTTGCTTTCAGAAGCAGGGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GGCAGACTTCTAAGCAGCAAGTCTTCAGGTAGGTCTGAAGTCTGTCTGCTAAAGACTGAGAAAGCAGTTTaGGATCTACTCCTACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GRLLSSKSSGRSEVCLLKTEKAV*DLLLPG Trigger: CCCTGGTAGGAGTAGATCCCAAACTGCTTTCTCAGT...CTTTAGCAGACAGACTTCAGACCTACCTGAAGACTTGCTGCTTAGAAGTCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CAA 90 bp | CTGCACCTATTTTTCAATGTTAGATACAAGTGCCAGGCAAAGATATaGCACACAGGACCAGAGGCATGCAAGCCACTGAGCAGCTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LHLFFNVRYKCQAKI*HTGPEACKPLSSWL Trigger: TAACCAGCTGCTCAGTGGCTTGCATGCCTCTGGTCCTGTGTGCAATATCTTTGCCTGGCACTTGTATCTAACATTGAAAAATAGGTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR TCA 90 bp | CATGAGGCTTTGTCTACTTACTTTTGGACTGCAGCTGACATGCTAGGCCATCTTGATGAAGTCTGCTCGTaGACAAACAGGAACACACCT | + |
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Preference number: 2 (lower is better) Translates to: HEALSTYFWTAADMLGHLDEVCS*TNRNTP Trigger: AGGTGTGTTCCTGTTTGTTCACGAGCAGACTTCATC...AAGATGGCCTAGCATGTCAGCTGCAGTCCAAAAGTAAGTAGACAAAGCCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR GCA 90 bp | GGCAGACTTCTAAGCAGCAAGTCTTCAGGTAGGTCTGAAGTCTGTCTGCTAAAGTTCTTTCCCCACTTCTaGTCTCTTAAGGTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GRLLSSKSSGRSEVCLLKFFPHF*SLKVPR Trigger: TCTGGGAACCTTAAGAGAGCAGAAGTGGGGAAAGAA...CTTTAGCAGACAGACTTCAGACCTACCTGAAGACTTGCTGCTTAGAAGTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGAGCAAATGTACTGAGAAAGCAGTTTGGGATCTACTCCTACCAGGGATCCACCTCTCCTGGTTCTaGCAGGTACATAATTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VWSKCTEKAVWDLLLPGIHLSWF*QVHNFL Trigger: GAGGAAATTATGTACCTGCCAGAACCAGGAGAGGTG...GATCCCTGGTAGGAGTAGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GAGTTACTAAGAAGTGGAACATGTTTATTCCTGCCCAGTGTTCAGGGGCAGACTCAGGCCGAGGAAAGATaGCATTTCAGTGATGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ELLRSGTCLFLPSVQGQTQAEER*HFSDAE Trigger: TTCTGCATCACTGAAATGCCATCTTTCCTCGGCCTG...AGTCTGCCCCTGAACACTGGGCAGGAATAAACATGTTCCACTTCTTAGTAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGAGCAAATGTACTGAGAAAGCAGTTTGGGATCTACTCCTACCAGGGATCATTGGTGGTATATGCTaGGCCCAGGCAACTCACATA | + |
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Preference number: 2 (lower is better) Translates to: VWSKCTEKAVWDLLLPGIIGGIC*AQATHI Trigger: TATGTGAGTTGCCTGGGCCCAGCATATACCACCAAT...GATCCCTGGTAGGAGTAGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | CCACCAGAATTCCCCAAAGTCCTGACAATATTGTGGACTACAACTGATGCCAATCCCATCTCATCTCATTaGTGGTATATGCTGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PPEFPKVLTILWTTTDANPISSH*WYMLGP Trigger: TGGGCCCAGCATATACCACCAATGAGATGAGATGGG...ATTGGCATCAGTTGTAGTCCACAATATTGTCAGGACTTTGGGGAATTCTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR CAA 90 bp | ACCTCTCCTGGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTaGTTGCCAAGTTCAGTTTTATTTGGCCACTGTTCTGAACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TSPGSGRYIISSQSS*LPSSVLFGHCSEPL Trigger: CAGAGGTTCAGAACAGTGGCCAAATAAAACTGAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCCCTGCTTCTGAAAGCAAAAGACATTGAGAAACCCCTTTGTTCCACTGGAAGCAGTCAGTCTTTCTaGCTCCTTCACTCTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NSLLLKAKDIEKPLCSTGSSQSF*LLHSPV Trigger: CACTGGAGAGTGAAGGAGGCAGAAAGACTGACTGCT...TCCAGTGGAACAAAGGGGTTTCTCAATGTCTTTTGCTTTCAGAAGCAGGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
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| 3UTR-3UTR CCA 90 bp | GGAAAAGAAGTCACTGTCCACCAGCTAGGAGTTACTAAGAAGTGGAACATGTTTCCCTCTCTCACACTTTaGCACATGAGCCTCGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GKEVTVHQLGVTKKWNMFPSLTL*HMSLEL Trigger: TAACTCGAGGCTCATGTGCCAAAGTGTGAGAGAGGG...AAACATGTTCCACTTCTTAGTAACTCCTAGCTGGTGGACAGTGACTTCTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR GCA 90 bp | GGAAAAGAAGTCACTGTCCACCAGCTAGGAGTTACTAAGAAGTGGAACATGTTTCTCGAGTTATTTGAGTaGATTTCTTCCTGCCCACGC | + |
|
Preference number: 2 (lower is better) Translates to: GKEVTVHQLGVTKKWNMFLELFE*ISSCPR Trigger: GCGTGGGCAGGAAGAAATGCACTCAAATAACTCGAG...AAACATGTTCCACTTCTTAGTAACTCCTAGCTGGTGGACAGTGACTTCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR CCA 90 bp | CATGAGGCTTTGTCTACTTACTTTTGGACTGCAGCTGACATGCTAGGCCATCTTGGAGTTACTAAGAAGTaGAACATGTTTATTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: HEALSTYFWTAADMLGHLGVTKK*NMFIPA Trigger: GGCAGGAATAAACATGTTCCACTTCTTAGTAACTCC...AAGATGGCCTAGCATGTCAGCTGCAGTCCAAAAGTAAGTAGACAAAGCCTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CAA 90 bp | TTAATCTTGAAAAGACACCGTCTCATTGTGATGACAAAGCTGGTTTaGAACTTGTGGACTCATGATCCTCCTCTAATAGCTAGGACTGCG | + |
|
Preference number: 2 (lower is better) Translates to: LILKRHRLIVMTKLV*NLWTHDPPLIARTA Trigger: CGCAGTCCTAGCTATTAGAGGAGGATCATGAGTCCACAAGTTCAAAACCAGCTTTGTCATCACAATGAGACGGTGTCTTTTCAAGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGAGAACAGTAGGACATTTGCAGTCTGCACCTATTTTTCAATGTTAGATACATTCCAGCACTGGAAATaGAAGCCAGGTCCTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VENSRTFAVCTYFSMLDTFQHWK*KPGPSS Trigger: TGAGGAAGGACCTGGCTTCCATTTCCAGTGCTGGAA...TGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAGAACAGTAGGACATTTGCAGTCTGCACCTATTTTTCAATGTTAGATACATGGGGCTATGGATATTaGCAAGTACCTGCTGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VENSRTFAVCTYFSMLDTWGYGY*QVPAGF Trigger: GAAACCAGCAGGTACTTGGCAATATCCATAGCCCCA...TGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAGAACAGTAGGACATTTGCAGTCTGCACCTATTTTTCAATGTTAGATACACTGCTGAATGATACCTaGCCAGCACACAATGGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VENSRTFAVCTYFSMLDTLLNDT*PAHNGS Trigger: TGAACCATTGTGTGCTGGGCAGGTATCATTCAGCAG...TGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAGAACAGTAGGACATTTGCAGTCTGCACCTATTTTTCAATGTTAGATACAGAACATGTTTATTCCTaGCCAGTGTTCAGGGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: VENSRTFAVCTYFSMLDTEHVYS*PVFRGR Trigger: TCTGCCCCTGAACACTGGGCAGGAATAAACATGTTC...TGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR TCA 90 bp | GTAGAGAACAGTAGGACATTTGCAGTCTGCACCTATTTTTCAATGTTAGATACAACTTCTGTACCAGGATaGCCTGTTTCAAAACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VENSRTFAVCTYFSMLDTTSVPG*PVSKLL Trigger: CAGCAGTTTTGAAACAGGTCATCCTGGTACAGAAGT...TGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR TCA 90 bp | GTAGAGAACAGTAGGACATTTGCAGTCTGCACCTATTTTTCAATGTTAGATACATCACACTTTGGCACATaGGCCTCGAGTTATTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VENSRTFAVCTYFSMLDTSHFGT*ASSYLS Trigger: ACTCAAATAACTCGAGGCTCATGTGCCAAAGTGTGA...TGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR GCA 90 bp | AATTCCCTGCTTCTGAAAGCAAAAGACATTGAGAAACCCCTTTGTTCCACTGGACGCAAAGCTCTTTGTTaGCAAGTTCAGTTTTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: NSLLLKAKDIEKPLCSTGRKALC*QVQFYL Trigger: CAAATAAAACTGAACTTGGCAACAAAGAGCTTTGCG...TCCAGTGGAACAAAGGGGTTTCTCAATGTCTTTTGCTTTCAGAAGCAGGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR CCA 90 bp | AATTCCCTGCTTCTGAAAGCAAAAGACATTGAGAAACCCCTTTGTTCCACTGGATCAAGTTCAGAAGTTTaGAGCAAATGTACTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NSLLLKAKDIEKPLCSTGSSSEV*SKCTEK Trigger: TTTCTCAGTACATTTGCTCCAAACTTCTGAACTTGA...TCCAGTGGAACAAAGGGGTTTCTCAATGTCTTTTGCTTTCAGAAGCAGGGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CAA 90 bp | GTTTGGACCTGTAAACCACCAGAATTCCCCAAAGTCCTGACAATATaGTGGACTACAACTGATGCCAATCTATTAAGCTTTTTAAACATT | + |
|
Preference number: 2 (lower is better) Translates to: VWTCKPPEFPKVLTI*WTTTDANLLSFLNI Trigger: AATGTTTAAAAAGCTTAATAGATTGGCATCAGTTGTAGTCCACAATATTGTCAGGACTTTGGGGAATTCTGGTGGTTTACAGGTCCAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | CTGACCCTTTCTCCTGGGCTCAGGCTTCTGAGCAGCTaGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LTLSPGLRLLSS*ASRCTAVPRLL Trigger: AAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCCAGCTGCTCAGAAGCCTGAGCCCAGGAGAAAGGGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR TCA 72 bp | GAGAGGGCCACAGCTGGCCACAGCAGTGGAGCCTTCTaGGTGGAGGGTAAGAGAAGAGCAGCCAGACCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ERATAGHSSGAF*VEGKRRAARPL Trigger: TAGAGGTCTGGCTGCTCTTCTCTTACCCTCCACTCAGAAGGCTCCACTGCTGTGGCCAGCTGTGGCCCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR TCA 72 bp | CCTCCTTCACTCTCCAGTGCTGCCCCTCAGCTTAAGTaGAGCGATGGTGGCCTGTGGTGTAAGCCAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPSLSSAAPQLK*SDGGLWCKPGA Trigger: AGCACCTGGCTTACACCACAGGCCACCATCGCTTCACTTAAGCTGAGGGGCAGCACTGGAGAGTGAAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR GCA 72 bp | CCACCAGGGACCCCATCTCATCTCATTGGTGGTATATaGTGGGCCCAGGCAACTCACATAGAGCTCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPGTPSHLIGGI*WAQATHIELWG Trigger: GCCCCAGAGCTCTATGTGAGTTGCCTGGGCCCAGCATATACCACCAATGAGATGAGATGGGGTCCCTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR GCA 72 bp | GCCCAGGCAACTCACATAGAGCTCTGGGGCACAAGATaGTGGGCTCTCCCTTTCCTTGGGCTACCAAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: AQATHIELWGTR*WALPFLGLPNK Trigger: CTTGTTTGGTAGCCCAAGGAAAGGGAGAGCCCAGCATCTTGTGCCCCAGAGCTCTATGTGAGTTGCCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | ACCAAACAAGCAACTGAGGAAGGAGTAGGGCCTGGGTaGAGACCACTGAGCACCAAGGCTAAGGTGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TKQATEEGVGPG*RPLSTKAKVTQ Trigger: CTGGGTCACCTTAGCCTTGGTGCTCAGTGGTCTCCACCCAGGCCCTACTCCTTCCTCAGTTGCTTGTTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | GCTCTGGGGCACAAGATGCTGGGCTCTCCCTTTCCTTaGGCTACCAAACAAGCAACTGAGGAAGGAGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALGHKMLGSPFP*ATKQATEEGVG Trigger: CCCTACTCCTTCCTCAGTTGCTTGTTTGGTAGCCCAAGGAAAGGGAGAGCCCAGCATCTTGTGCCCCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGACTTCTAAGCAGCAAGTCTTCAGGTAGGTCTGAAGTCTGTCTGCTAAAGCTGCCTGCCTGCAGGTaGGCCATGCTCCTTGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: GRLLSSKSSGRSEVCLLKLPACR*AMLLGS Trigger: GGATCCAAGGAGCATGGCCAACCTGCAGGCAGGCAG...CTTTAGCAGACAGACTTCAGACCTACCTGAAGACTTGCTGCTTAGAAGTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR GCA 72 bp | TTCAATAGCATGGTGGAAAGCCAGAGGAGCAGGTGCTaGAGGGAAAAGCCAGCAGTCAGTCTTTCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FNSMVESQRSRC*REKPAVSLSAS Trigger: GGAGGCAGAAAGACTGACTGCTGGCTTTTCCCTGCAGCACCTGCTCCTCTGGCTTTCCACCATGCTATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | CAGGCAACTCACATAGAGCTCTGGGGCACAAGATGCTaGGCTCTCCCTTTCCTTGGGCTACCAAACAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QATHIELWGTRC*ALPFLGLPNKQ Trigger: TTGCTTGTTTGGTAGCCCAAGGAAAGGGAGAGCCCAGCATCTTGTGCCCCAGAGCTCTATGTGAGTTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | TCAATGAGGCCCACCAGGGACCCCATCTCATCTCATTaGTGGTATATGCTGGGCCCAGGCAACTCACATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SMRPTRDPISSH*WYMLGPGNSHR Trigger: TCTATGTGAGTTGCCTGGGCCCAGCATATACCACCAATGAGATGAGATGGGGTCCCTGGTGGGCCTCATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR TCA 72 bp | GGGCCCTACAAGACATCAACTGGAATCAAAGGTCAATaGGGCCCACCAGGGACCCCATCTCATCTCATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GPYKTSTGIKGQ*GPPGTPSHLIG Trigger: ACCAATGAGATGAGATGGGGTCCCTGGTGGGCCTCATTGACCTTTGATTCCAGTTGATGTCTTGTAGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR TCA 72 bp | TCTATAGCCCCATCGGCTCAGGAGGTTGAAGAGAGATaGTCAGTTGAGCCCAGGAGTTTTGAGAGCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SIAPSAQEVEER*SVEPRSFESSL Trigger: CAGGCTGCTCTCAAAACTCCTGGGCTCAACTGATCATCTCTCTTCAACCTCCTGAGCCGATGGGGCTATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| 3UTR CCA 72 bp | TGCAAGCCACTGAGCAGCTGGTTAAAGAGCTACCAATaGAGACAAGTCCCAGAGGTCCTCCAGGGACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CKPLSSWLKSYQ*RQVPEVLQGQK Trigger: TTTCTGTCCCTGGAGGACCTCTGGGACTTGTCTCCATTGGTAGCTCTTTAACCAGCTGCTCAGTGGCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTCGGAACACCAACAGGTTGCATTCAGCCCAGTGTAGGGACTTGAGAACTCATCGGCTCAGGAGGTaGAAGAGAGATGATCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GFRNTNRLHSAQCRDLRTHRLRR*KRDDQL Trigger: CAACTGATCATCTCTCTTCAACCTCCTGAGCCGATG...AGTTCTCAAGTCCCTACACTGGGCTGAATGCAACCTGTTGGTGTTCCGAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| 3UTR TCA 72 bp | CCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACTaGTTCAGCCCTAGCGATGGATGTGGATTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PYPGCFSRVRNH*FSPSDGCGFFS Trigger: AGAAAAGAATCCACATCCATCGCTAGGGCTGAATCAGTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | ACAGCACAATACAACAGCAGCCAACCTGCTACCCCTTaGTGTTCCCTTTTTCCAGCACTGGAAATGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAQYNSSQPATP*CSLFPALEMEA Trigger: GGCTTCCATTTCCAGTGCTGGAAAAAGGGAACACCAAGGGGTAGCAGGTTGGCTGCTGTTGTATTGTGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | AACCTGCTACCCCTTGGTGTTCCCTTTTTCCAGCACTaGAAATGGAAGCCAGGTCCTTCCTCATATGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: NLLPLGVPFFQH*KWKPGPSSYVT Trigger: TGTCACATATGAGGAAGGACCTGGCTTCCATTTCCAGTGCTGGAAAAAGGGAACACCAAGGGGTAGCAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCCTTGGTGTTCCCTTTTTCCAGCACTGGAAATGGAAGCCAGGTCCTTCCCAAGTTCAGTTTTATTaGGCCACTGTTCTGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPLGVPFFQHWKWKPGPSQVQFY*ATVLNL Trigger: GAGGTTCAGAACAGTGGCCAAATAAAACTGAACTTG...GGAAGGACCTGGCTTCCATTTCCAGTGCTGGAAAAAGGGAACACCAAGGGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGAGGAGTCTGCTGTGCCAGCAGTGCACACATCTATAGCCCCATCGGCTCATCGCAAAGCTCTTTGTaGCCAAGTTCAGTTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: ARGVCCASSAHIYSPIGSSQSSL*PSSVLF Trigger: AAATAAAACTGAACTTGGCAACAAAGAGCTTTGCGA...TGAGCCGATGGGGCTATAGATGTGTGCACTGCTGGCACAGCAGACTCCTCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| 3UTR TCA 72 bp | AAACCAAACCACTCCCCTCTCTCACACTTTGGCACATaGGCCTCGAGTTATTTGAGTGCATTTCTTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KPNHSPLSHFGT*ASSYLSAFLPA Trigger: GGCAGGAAGAAATGCACTCAAATAACTCGAGGCTCATGTGCCAAAGTGTGAGAGAGGGGAGTGGTTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | GAAGTCACTGTCCACCAGCTAGGAGTTACTAAGAAGTaGAACATGTTTATTCCTGCCCAGTGTTCAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EVTVHQLGVTKK*NMFIPAQCSGA Trigger: TGCCCCTGAACACTGGGCAGGAATAAACATGTTCCACTTCTTAGTAACTCCTAGCTGGTGGACAGTGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR GCA 72 bp | CACATGAGCCTCGAGTTATTTGAGTGCATTTCTTCCTaGCCACGCCATGACAACATTTCAGTCATCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HMSLELFECISS*PRHDNISVILS Trigger: GGAAAGGATGACTGAAATGTTGTCATGGCGTGGGCAGGAAGAAATGCACTCAAATAACTCGAGGCTCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | GCTCGTGAACAAACAGGAACACACCTCTCCTGGTTCTaGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AREQTGTHLSWF*QVHNFLAKLFV Trigger: AACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAGGTGTGTTCCTGTTTGTTCACGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | CCAAACCAAACCAAACCACTCCCCTCTCTCACACTTTaGCACATGAGCCTCGAGTTATTTGAGTGCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PNQTKPLPSLTL*HMSLELFECIS Trigger: AGAAATGCACTCAAATAACTCGAGGCTCATGTGCCAAAGTGTGAGAGAGGGGAGTGGTTTGGTTTGGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR GCA 72 bp | TTTCAGTGGGACTCAGATCATCATTCAAAACTTTGTTaGATGTCAGAGTCATGGTGGGGGCTTTCGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: FQWDSDHHSKLC*MSESWWGLSEH Trigger: GTGTTCCGAAAGCCCCCACCATGACTCTGACATGCAACAAAGTTTTGAATGATGATCTGAGTCCCACTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACCTCTCCTGGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTCAAGTTCAGTTTTATTaGGCCACTGTTCTGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: ENLSWFWQVHNFLAKLFVQVQFY*ATVLNL Trigger: GAGGTTCAGAACAGTGGCCAAATAAAACTGAACTTG...AACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAGGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| 3UTR TCA 72 bp | ATTGCCCTCAAGTTCAGAAGTTTGGAGCAAATGTACTaGGAAAGCAGTTTGGGATCTACTCCTACCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: IALKFRSLEQMY*ESSLGSTPTRD Trigger: ATCCCTGGTAGGAGTAGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAAACTTCTGAACTTGAGGGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | GCGATGGATGTGGATTCTTTTCTTCTACCTAAGTCTTaGGATGATGTATTGTTATGGTTTCTGAGCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AMDVDSFLLPKS*DDVLLWFLSPS Trigger: GCTGGGGCTCAGAAACCATAACAATACATCATCCCAAGACTTAGGTAGAAGAAAAGAATCCACATCCATCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR TCA 72 bp | TACAAAGTGAGCTCCAGGCCAGCTAGAGTTACAAAGTaGGACCCTGAAGACAAAGAGATCAAAGGAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YKVSSRPARVTK*DPEDKEIKGTK Trigger: TTTTGTTCCTTTGATCTCTTTGTCTTCAGGGTCTCACTTTGTAACTCTAGCTGGCCTGGAGCTCACTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR GCA 72 bp | CTCGTTGGAGTAGAGAACAGTAGGACATTTGCAGTCTaGACCTATTTTTCAATGTTAGATACAAGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVGVENSRTFAV*TYFSMLDTSAR Trigger: CCTGGCACTTGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTACTCCAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTACTAAGAAGTGGAACATGTTTATTCCTGCCCAGTGTTCAGGGGCAGACTTCGCAAAGCTCTTTGTaGCCAAGTTCAGTTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: ELLRSGTCLFLPSVQGQTSQSSL*PSSVLF Trigger: AAATAAAACTGAACTTGGCAACAAAGAGCTTTGCGA...AGTCTGCCCCTGAACACTGGGCAGGAATAAACATGTTCCACTTCTTAGTAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR TCA 72 bp | TTTGGACCTGTAAACCACCAGAATTCCCCAAAGTCCTaGCAATATTGTGGACTACAACTGATGCCAATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FGPVNHQNSPKS*QYCGLQLMPIY Trigger: ATAGATTGGCATCAGTTGTAGTCCACAATATTGTCAGGACTTTGGGGAATTCTGGTGGTTTACAGGTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR TCA 72 bp | GAATATGAATTCCCTGCTTCTGAAAGCAAAAGACATTaGGAAACCCCTTTGTTCCACTGGAATCTGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EYEFPASESKRH*ETPLFHWNLTP Trigger: TGGAGTCAGATTCCAGTGGAACAAAGGGGTTTCTCAATGTCTTTTGCTTTCAGAAGCAGGGAATTCATATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CCA 72 bp | CTCTTTTATTTAGTATTGCCCTCAAGTTCAGAAGTTTaGAGCAAATGTACTGAGAAAGCAGTTTGGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LFYLVLPSSSEV*SKCTEKAVWDL Trigger: TAGATCCCAAACTGCTTTCTCAGTACATTTGCTCCAAACTTCTGAACTTGAGGGCAATACTAAATAAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGGCTTTCGGAACACCAACAGGTTGCATTCAGCCCAGTGTAGGGACTTGGCCACGCCGGGCTGCTaGGTGTTGATGGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGFRNTNRLHSAQCRDLATPGC*VLMGGG Trigger: GCCGCCGCCCATCAACACCCAGCAGCCCGGCGTGGC...CAAGTCCCTACACTGGGCTGAATGCAACCTGTTGGTGTTCCGAAAGCCCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACTGTAGAGCAAGCTGGTaGCCACGCCGGGCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRGALPYPGCFSRVRNHCRASW*PRRAAG Trigger: CCCAGCAGCCCGGCGTGGCCACCAGCTTGCTCTACA...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGGCTTTCGGAACACCAACAGGTTGCATTCAGCCCAGTGTAGGGACTTGGTGGCCACGCCGGGCTaGTGGGTGTTGATGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGFRNTNRLHSAQCRDLVATPG*WVLMGG Trigger: GCCGCCCATCAACACCCAGCAGCCCGGCGTGGCCAC...CAAGTCCCTACACTGGGCTGAATGCAACCTGTTGGTGTTCCGAAAGCCCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACCCAGTGTCCACGTGCTaGAGCACCACCTCTACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPRGALPYPGCFSRVRNHPVSTC*STTSTS Trigger: CGACGTAGAGGTGGTGCTGCAGCACGTGGACACTGG...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR CCA 90 bp | TCAAGGGTGGGATACAGCCAGGACTGGGCAGCTTCATCATGCCAGCTAGAGGAGTGTAGAGCAAGCTGGTaGCCACGCCGGGCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRVGYSQDWAASSCQLEECRASW*PRRAAG Trigger: CCCAGCAGCCCGGCGTGGCCACCAGCTTGCTCTACA...CTCCTCTAGCTGGCATGATGAAGCTGCCCAGTCCTGGCTGTATCCCACCCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | GGATACAGCCAGGACTGGGCAGCTTCATCATGCCAGCTAGAGGAGTCTGCTGTGGGTGGCCACGGAACTTaGAGCCGCTGTAGAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GYSQDWAASSCQLEESAVGGHGT*SRCRAS Trigger: GCTTGCTCTACAGCGGCTCCAAGTTCCGTGGCCACC...CACAGCAGACTCCTCTAGCTGGCATGATGAAGCTGCCCAGTCCTGGCTGTATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR GCA 90 bp | GGATACAGCCAGGACTGGGCAGCTTCATCATGCCAGCTAGAGGAGTCTGCTGTGCGTACGAGTTCCCCTTaGTCTTCTGGTGGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYSQDWAASSCQLEESAVRTSSP*SSGGHG Trigger: TCCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACG...CACAGCAGACTCCTCTAGCTGGCATGATGAAGCTGCCCAGTCCTGGCTGTATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTACTAAGAAGTGGAACATGTTTATTCCTGCCCAGTGTTCAGGGGCAGACTGCCACGCCGGGCTGCTaGGTGTTGATGGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELLRSGTCLFLPSVQGQTATPGC*VLMGGG Trigger: GCCGCCGCCCATCAACACCCAGCAGCCCGGCGTGGC...AGTCTGCCCCTGAACACTGGGCAGGAATAAACATGTTCCACTTCTTAGTAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACATGTCTTTGATTGTGTaGTCCGGGACTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPRGALPYPGCFSRVRNHMSLIV*SGTRNC Trigger: GCAGTTCCTAGTCCCGGACCACACAATCAAAGACAT...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR GCA 90 bp | GGGCCTCGAGGTGCACTGCCGTACCCAGGCTGCTTCTCAAGGGTAAGGAACCACAAAAAGCCAGAAACTTaGCCCAGTGTTTCCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRGALPYPGCFSRVRNHKKPET*PSVSDP Trigger: TGGATCGGAAACACTGGGGCAAGTTTCTGGCTTTTT...GTGGTTCCTTACCCTTGAGAAGCAGCCTGGGTACGGCAGTGCACCTCGAGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR GCA 90 bp | AATTCCCTGCTTCTGAAAGCAAAAGACATTGAGAAACCCCTTTGTTCCACTGGAGTGGCCACGCCGGGCTaGTGGGTGTTGATGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSLLLKAKDIEKPLCSTGVATPG*WVLMGG Trigger: GCCGCCCATCAACACCCAGCAGCCCGGCGTGGCCAC...TCCAGTGGAACAAAGGGGTTTCTCAATGTCTTTTGCTTTCAGAAGCAGGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR TCA 90 bp | GCTAGAGGAGTCTGCTGTGCCAGCAGTGCACACATCTATAGCCCCATCGGCTCACTCTATGGAGGCTGCTaGCTTCTGAAAGCAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARGVCCASSAHIYSPIGSLYGGC*LLKADV Trigger: TACATCTGCTTTCAGAAGTCAGCAGCCTCCATAGAG...TGAGCCGATGGGGCTATAGATGTGTGCACTGCTGGCACAGCAGACTCCTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCTAGAGGAGTCTGCTGTGCCAGCAGTGCACACATCTATAGCCCCATCGATGTCTTTGATTGTGTaGTCCGGGACTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CQLEESAVPAVHTSIAPSMSLIV*SGTRNC Trigger: GCAGTTCCTAGTCCCGGACCACACAATCAAAGACAT...CGATGGGGCTATAGATGTGTGCACTGCTGGCACAGCAGACTCCTCTAGCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR GCA 90 bp | GGATACAGCCAGGACTGGGCAGCTTCATCATGCCAGCTAGAGGAGTCTGCTGTGAAAAAGCCAGAAACTTaGCCCAGTGTTTCCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYSQDWAASSCQLEESAVKKPET*PSVSDP Trigger: TGGATCGGAAACACTGGGGCAAGTTTCTGGCTTTTT...CACAGCAGACTCCTCTAGCTGGCATGATGAAGCTGCCCAGTCCTGGCTGTATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGACTTCTAAGCAGCAAGTCTTCAGGTAGGTCTGAAGTCTGTCTGCTAAAGTTCCCCTTGCTCTTCTaGTGGCCACGGAACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLLSSKSSGRSEVCLLKFPLLF*WPRNLE Trigger: CTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGGGAA...CTTTAGCAGACAGACTTCAGACCTACCTGAAGACTTGCTGCTTAGAAGTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CAA 72 bp | GCCCAGAAAACCCGACAGCCATGTGCTAGTCTTGCATaGTTAACACACAGGGCCCTACAAGACATCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQKTRQPCASLA*LTHRALQDINW Trigger: CCAGTTGATGTCTTGTAGGGCCCTGTGTGTTAACAATGCAAGACTAGCACATGGCTGTCGGGTTTTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CAA 72 bp | CACAGCACAATACAACAGCAGCCAACCTGCTACCCCTaGGTGTTCCCTTTTTCCAGCACTGGAAATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSTIQQQPTCYP*VFPFSSTGNGS Trigger: GCTTCCATTTCCAGTGCTGGAAAAAGGGAACACCAAGGGGTAGCAGGTTGGCTGCTGTTGTATTGTGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR CCA 90 bp | GGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCCAAGTTCAGTTTTATTTCGCTGTAGAGCAAGCTaGTGGCCACGCCGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRYIISSQSSLLPSSVLFRCRAS*WPRRAA Trigger: AGCAGCCCGGCGTGGCCACCAGCTTGCTCTACAGCG...AAATAAAACTGAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAAGAAGTCACTGTCCACCAGCTAGGAGTTACTAAGAAGTGGAACATGTTTGGTGGCCACGGAACTTaGAGCCGCTGTAGAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKEVTVHQLGVTKKWNMFGGHGT*SRCRAS Trigger: GCTTGCTCTACAGCGGCTCCAAGTTCCGTGGCCACC...AAACATGTTCCACTTCTTAGTAACTCCTAGCTGGTGGACAGTGACTTCTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR CCA 90 bp | GAGAACCTCTCCTGGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTTTCCCCTTGCTCTTCTaGTGGCCACGGAACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENLSWFWQVHNFLAKLFVFPLLF*WPRNLE Trigger: CTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGGGAA...AACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAGGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCGGAACACCAACAGGTTGCATTCAGCCCAGTGTAGGGACTTGAGAACTGAACTCATAGATGGGTaGACTGTGTTCAGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: GFRNTNRLHSAQCRDLRTELIDG*TVFRNM Trigger: CATGTTCCTGAACACAGTGCACCCATCTATGAGTTC...AGTTCTCAAGTCCCTACACTGGGCTGAATGCAACCTGTTGGTGTTCCGAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGATGACAAAGCTGGTTTTGAACTTGTGGACTCATGATCCTCCTCTAATACCCTTGCTCTTCTGGTaGCCACGGAACTTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IVMTKLVLNLWTHDPPLIPLLFW*PRNLEP Trigger: CGGCTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGG...TATTAGAGGAGGATCATGAGTCCACAAGTTCAAAACCAGCTTTGTCATCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCCAAGTTCAGTTGAACATGGGTCAGGTTaGGGGACTGATACCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGRYIISSQSSLLPSSVEHGSG*GTDTIL Trigger: CAGAATGGTATCAGTCCCTCAACCTGACCCATGTTC...AACTGAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACTTCTGTACCAGGATGACCTGTTTCAAAACTGCTGGTTGATTAAATATCCCTTGCTCTTCTGGTaGCCACGGAACTTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AKLLYQDDLFQNCWLIKYPLLFW*PRNLEP Trigger: CGGCTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGG...ATATTTAATCAACCAGCAGTTTTGAAACAGGTCATCCTGGTACAGAAGTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR TCA 90 bp | GAGAACCTCTCCTGGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCTCCTTCCACCTCATaGAGACATAATCCCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ENLSWFWQVHNFLAKLFVAPSTS*RHNPHF Trigger: AAAATGGGGATTATGTCTTCATGAGGTGGAAGGAGC...AACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAGGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACTTCTGTACCAGGATGACCTGTTTCAAAACTGCTGGTTGATTAAATATCGTACGAGTTCCCCTTaGTCTTCTGGTGGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: AKLLYQDDLFQNCWLIKYRTSSP*SSGGHG Trigger: TCCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACG...ATATTTAATCAACCAGCAGTTTTGAAACAGGTCATCCTGGTACAGAAGTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR GCA 90 bp | GAGTTACTAAGAAGTGGAACATGTTTATTCCTGCCCAGTGTTCAGGGGCAGACTGAACTCATAGATGGGTaGACTGTGTTCAGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: ELLRSGTCLFLPSVQGQTELIDG*TVFRNM Trigger: CATGTTCCTGAACACAGTGCACCCATCTATGAGTTC...AGTCTGCCCCTGAACACTGGGCAGGAATAAACATGTTCCACTTCTTAGTAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CAA 72 bp | TTTTTCAATGTTAGATACAAGTGCCAGGCAAAGATATaGCACACAGGACCAGAGGCATGCAAGCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFNVRYKCQAKI*HTGPEACKPLS Trigger: GCTCAGTGGCTTGCATGCCTCTGGTCCTGTGTGCAATATCTTTGCCTGGCACTTGTATCTAACATTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR TCA 90 bp | GGAAAAGAAGTCACTGTCCACCAGCTAGGAGTTACTAAGAAGTGGAACATGTTTCTCTATGGAGGCTGCTaGCTTCTGAAAGCAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKEVTVHQLGVTKKWNMFLYGGC*LLKADV Trigger: TACATCTGCTTTCAGAAGTCAGCAGCCTCCATAGAG...AAACATGTTCCACTTCTTAGTAACTCCTAGCTGGTGGACAGTGACTTCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCCAAGTTCAGTTGAAGGTTGTAAGGGTTaGATATTCCTCTGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGRYIISSQSSLLPSSVEGCKG*IFLCKA Trigger: GGCCTTACAGAGGAATATCCAACCCTTACAACCTTC...AACTGAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCCTGCTTCTGAAAGCAAAAGACATTGAGAAACCCCTTTGTTCCACTGGAGAAGGTTGTAAGGGTTaGATATTCCTCTGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLLLKAKDIEKPLCSTGEGCKG*IFLCKA Trigger: GGCCTTACAGAGGAATATCCAACCCTTACAACCTTC...TCCAGTGGAACAAAGGGGTTTCTCAATGTCTTTTGCTTTCAGAAGCAGGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CAA 72 bp | GGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTaGTTGCCAAGTTCAGTTTTATTTGGCCACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGRYIISSQSS*LPSSVLFGHCS Trigger: AGAACAGTGGCCAAATAAAACTGAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| 3UTR CAA 72 bp | TCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTaGCCAAGTTCAGTTTTATTTGGCCACTGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRYIISSQSSL*PSSVLFGHCSE Trigger: TTCAGAACAGTGGCCAAATAAAACTGAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| 3UTR CAA 72 bp | GATTCTTTTCTTCTACCTAAGTCTTGGGATGATGTATaGTTATGGTTTCTGAGCCCCAGCTTTACTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSFLLPKSWDDV*LWFLSPSFTDW Trigger: CCAGTCAGTAAAGCTGGGGCTCAGAAACCATAACAATACATCATCCCAAGACTTAGGTAGAAGAAAAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| 3UTR CAA 72 bp | AAAAGACACCGTCTCATTGTGATGACAAAGCTGGTTTaGAACTTGTGGACTCATGATCCTCCTCTAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRHRLIVMTKLV*NLWTHDPPLIA Trigger: AGCTATTAGAGGAGGATCATGAGTCCACAAGTTCAAAACCAGCTTTGTCATCACAATGAGACGGTGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCCAAGTTCAGTTTTATTTGCTCCTTCCACCTCATaGAGACATAATCCCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRYIISSQSSLLPSSVLFAPSTS*RHNPHF Trigger: AAAATGGGGATTATGTCTTCATGAGGTGGAAGGAGC...AAATAAAACTGAACTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| 3UTR CAA 72 bp | TGTAAACCACCAGAATTCCCCAAAGTCCTGACAATATaGTGGACTACAACTGATGCCAATCTATTAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKPPEFPKVLTI*WTTTDANLLSF Trigger: AAAGCTTAATAGATTGGCATCAGTTGTAGTCCACAATATTGTCAGGACTTTGGGGAATTCTGGTGGTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS CCA 90 bp | CTACGTCGTACGAGTTCCCCTTGCTCTTCTGGTGGCCACGGAACTTaGAGCCGCTGTAGAGCAAGCTGGTGGCCACGCCGGGCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRRTSSPCSSGGHGT*SRCRASWWPRRAAG Trigger: CCCAGCAGCCCGGCGTGGCCACCAGCTTGCTCTACAGCGGCTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACGACGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCTAGAGGAGTCTGCTGTGCCAGCAGTGCACACATCTATAGCCCCATCGCCGGGCTGCTGGGTGTaGATGGGCGGCGGCGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CQLEESAVPAVHTSIAPSPGCWV*MGGGGM Trigger: CATCCCGCCGCCGCCCATCAACACCCAGCAGCCCGG...CGATGGGGCTATAGATGTGTGCACTGCTGGCACAGCAGACTCCTCTAGCTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS GCA 90 bp | TGTCCACGTGCTGCAGCACCACCTCTACGTCGTACGAGTTCCCCTTaGTCTTCTGGTGGCCACGGAACTTGGAGCCGCTGTAGAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPRAAAPPLRRTSSP*SSGGHGTWSRCRAS Trigger: GCTTGCTCTACAGCGGCTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACGACGTAGAGGTGGTGCTGCAGCACGTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTGGTTCTGGCAGGTACATAATTTCCTCGCAAAGCTCTTTGTTGCCAAGCCGGGCTGCTGGGTGTaGATGGGCGGCGGCGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSWFWQVHNFLAKLFVAKPGCWV*MGGGGM Trigger: CATCCCGCCGCCGCCCATCAACACCCAGCAGCCCGG...CTTGGCAACAAAGAGCTTTGCGAGGAAATTATGTACCTGCCAGAACCAGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTCATGGTGGGGGCTTTCGGAACACCAACAGGTTGCATTCAGCCCAGTGTCGTACGAGTTCCCCTaGCTCTTCTGGTGGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SESWWGLSEHQQVAFSPVSYEFP*LFWWPR Trigger: CCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACGA...CACTGGGCTGAATGCAACCTGTTGGTGTTCCGAAAGCCCCCACCATGACTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139477.8 |
||
| CDS CCA 90 bp | GGGACTGATACCATTCTGAGCTCCGATGGTAGTAGTAGCCCTCTATaGAGGCTGCTGACTTCTGAAAGCAGATGTAATAGAAACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTDTILSSDGSSSPL*RLLTSESRCNRNQQ Trigger: TTGCTGGTTTCTATTACATCTGCTTTCAGAAGTCAGCAGCCTCCATAGAGGGCTACTACTACCATCGGAGCTCAGAATGGTATCAGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAACAGTAGGACATTTGCAGTCTGCACCTATTTTTCAATGTTAGATACATCGTACGAGTTCCCCTaGCTCTTCTGGTGGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: VENSRTFAVCTYFSMLDTSYEFP*LFWWPR Trigger: CCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACGA...TGTATCTAACATTGAAAAATAGGTGCAGACTGCAAATGTCCTACTGTTCTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070681.7 |
||
| CDS CCA 72 bp | ACGAGTTCCCCTTGCTCTTCTGGTGGCCACGGAACTTaGAGCCGCTGTAGAGCAAGCTGGTGGCCACGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSPCSSGGHGT*SRCRASWWPRR Trigger: CCGGCGTGGCCACCAGCTTGCTCTACAGCGGCTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGGGAACTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS GCA 72 bp | GCTGCAGCACCACCTCTACGTCGTACGAGTTCCCCTTaGTCTTCTGGTGGCCACGGAACTTGGAGCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AAAPPLRRTSSP*SSGGHGTWSRC Trigger: ACAGCGGCTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACGACGTAGAGGTGGTGCTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS CAA 72 bp | TGCTGCAGCACCACCTCTACGTCGTACGAGTTCCCCTaGCTCTTCTGGTGGCCACGGAACTTGGAGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCSTTSTSYEFP*LFWWPRNLEPL Trigger: CAGCGGCTCCAAGTTCCGTGGCCACCAGAAGAGCAAGGGGAACTCGTACGACGTAGAGGTGGTGCTGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
||
| CDS CCA 72 bp | CCAGCAAAGGAAGCACCGCTGATGTCTTTGATTGTGTaGTCCGGGACTAGGAACTGCTCCTTCCACCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PAKEAPLMSLIV*SGTRNCSFHLM Trigger: CATGAGGTGGAAGGAGCAGTTCCTAGTCCCGGACCACACAATCAAAGACATCAGCGGTGCTTCCTTTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
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| CDS TCA 72 bp | TGTGGTCCGGGACTAGGAACTGCTCCTTCCACCTCATaGAGACATAATCCCCATTTTTCAGTTCTTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: CGPGLGTAPSTS*RHNPHFSVLHN Trigger: ATTATGAAGAACTGAAAAATGGGGATTATGTCTTCATGAGGTGGAAGGAGCAGTTCCTAGTCCCGGACCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
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| CDS CAA 90 bp | ACGTCTTCATCTGCGTCCCACTTCCGAGTTAAGAAAGGGTGTTTTTaGCTTATTATTTCTCCTTCAAAGAAGGTTGTAAGGGTTGGATAT | + |
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Preference number: 6 (lower is better) Translates to: TSSSASHFRVKKGCF*LIISPSKKVVRVGY Trigger: ATATCCAACCCTTACAACCTTCTTTGAAGGAGAAATAATAAGCAAAAAACACCCTTTCTTAACTCGGAAGTGGGACGCAGATGAAGACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070681.7 ENSMUST00000139477.8 |
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