Pregenerated sensors for GHSR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051136Ensembl transcript IDs: ENSMUST00000057186.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGTCCTTGAACTCCTGGTAATCCCCCTGCCTCAACTTCCCAAGTaGTGGCGTCACAAGTATGTACCACCACACCCAGCTAGACTTTCC | + |
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Preference number: 1 (lower is better) Translates to: AVLELLVIPLPQLPK*WRHKYVPPHPARLS Trigger: GGAAAGTCTAGCTGGGTGTGGTGGTACATACTTGTGACGCCAGCACTTGGGAAGTTGAGGCAGGGGGATTACCAGGAGTTCAAGGACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 90 bp | AATTGTTTCCAGATCCATTTGTCTCTAATCCCCAAACTGACGTTCTaGCTCCTCCCAAGTCCCGCTTGGCTATGGCTTCTGGTGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: NCFQIHLSLIPKLTF*LLPSPAWLWLLVWS Trigger: GCTCCACACCAGAAGCCATAGCCAAGCGGGACTTGGGAGGAGGCAGAACGTCAGTTTGGGGATTAGAGACAAATGGATCTGGAAACAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CCA 90 bp | ATGCCTTACGTTATGGTGCTTTGGGGTGCGTGTGATGGAGCTTTGTaGAGACTGCTAGCTTTTGAAAGGTCATGTCTTAAGTTGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: MPYVMVLWGACDGAL*RLLAFERSCLKLLF Trigger: AAACAGCAACTTAAGACATGACCTTTCAAAAGCTAGCAGTCTCCACAAAGCTCCATCACACGCACCCCAAAGCACCATAACGTAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR TCA 90 bp | CTTGAAGAGTGGCATGTGGGTAGATCAGACAAGGCAGAGACAAGTTaGAATAGAAATAGGCAGAAATGTTGTGGAAATTCTGAGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: LEEWHVGRSDKAETS*NRNRQKCCGNSEPA Trigger: AGCAGGCTCAGAATTTCCACAACATTTCTGCCTATTTCTATTTCAACTTGTCTCTGCCTTGTCTGATCTACCCACATGCCACTCTTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR TCA 90 bp | TCTATATTGAGGACCATAACCTTGACTTTGAGACTGCCTAAACTGTaGCAGAAACCTTACTTCTGGGTGACCAGGGCATTGGAAATAAGG | + |
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Preference number: 1 (lower is better) Translates to: SILRTITLTLRLPKL*QKPYFWVTRALEIR Trigger: CCTTATTTCCAATGCCCTGGTCACCCAGAAGTAAGGTTTCTGTCACAGTTTAGGCAGTCTCAAAGTCAAGGTTATGGTCCTCAATATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR TCA 90 bp | ACTACGCTGAGGAAAGGTGGAGATTTCTCATCAATCATTGCCTATTaGTTATATATATATATGCCTTACGTTATGGTGCTTTGGGGTGCG | + |
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Preference number: 1 (lower is better) Translates to: TTLRKGGDFSSIIAY*LYIYMPYVMVLWGA Trigger: CGCACCCCAAAGCACCATAACGTAAGGCATATATATATATAATCAATAGGCAATGATTGATGAGAAATCTCCACCTTTCCTCAGCGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGGGCCGTTGCCTGCTCTaGGCCCCTCCCTCCTTCGAG | + |
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Preference number: 2 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWGRCLL*APPSFE Trigger: CTCGAAGGAGGGAGGGGCGCAGAGCAGGCAACGGCC...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGCCCAAACTGACGTTCTaGCTCCTCCCAAGTCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWPKLTF*LLPSPA Trigger: AGCGGGACTTGGGAGGAGGCAGAACGTCAGTTTGGG...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCGGGGCTGCACATGAGTaGTCTGGTGGGCGCACAAAT | + |
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Preference number: 2 (lower is better) Translates to: VAQNIAGTSKMLTKGELSGAAHE*SGGRTN Trigger: ATTTGTGCGCCCACCAGAGCACTCATGTGCAGCCCC...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGTCAGGACTTCTGGTGTaGACCCCAAGAGATGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKSGLLV*TPRDGA Trigger: AGCCCCATCTCTTGGGGTCCACACCAGAAGTCCTGA...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCATGTGGGTAGATCAGACAAGGCAGAGACAAGTTGAAATAGAAATAGGCTCTGGTGTGGAGCAATaGGCGATGACGGAGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: SGMWVDQTRQRQVEIEIGSGVEQ*AMTERC Trigger: GCATCTCTCCGTCATCGCTCATTGCTCCACACCAGA...GCCTATTTCTATTTCAACTTGTCTCTGCCTTGTCTGATCTACCCACATGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGCAACTGCAAGTGGGCTaGGTGTATAGGGAACATACT | + |
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Preference number: 2 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKQLQVG*VYREHT Trigger: AGTATGTTCCCTATACACGCAGCCCACTTGCAGTTG...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCACTAATGAAACTAACTaGCCAACTGCAAGTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VAQNIAGTSKMLTKGELSTNETN*PTASGL Trigger: CAGCCCACTTGCAGTTGGGCAGTTAGTTTCATTAGT...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CAA 90 bp | TATATGCCTTACGTTATGGTGCTTTGGGGTGCGTGTGATGGAGCTTaGTGGAGACTGCTAGCTTTTGAAAGGTCATGTCTTAAGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: YMPYVMVLWGACDGA*WRLLAFERSCLKLL Trigger: CAGCAACTTAAGACATGACCTTTCAAAAGCTAGCAGTCTCCACAAAGCTCCATCACACGCACCCCAAAGCACCATAACGTAAGGCATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGGATGAGAAAAGCAAATaGAGTTTAGTGTTACACACC | + |
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Preference number: 2 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWDEKSK*SLVLHT Trigger: GGTGTGTAACACTAAACTCCATTTGCTTTTCTCATC...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATGCTTTGGGGTGCGTGTaGTGGAGCTTTGTGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: VCSQNLSHWICFSMLKLNALGCV*WSFVET Trigger: AGTCTCCACAAAGCTCCATCACACGCACCCCAAAGC...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGGTCAGAAGCTCCAAATaGAAATTCGCAAAATCACAG | + |
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Preference number: 2 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKVRSSK*KFAKSQ Trigger: CTGTGATTTTGCGAATTTGCATTTGGAGCTTCTGAC...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCCAAAACTTAAGCCATTaGATCTGCTTTTCCATGCTC | + |
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Preference number: 2 (lower is better) Translates to: VAQNIAGTSKMLTKGELSQNLSH*ICFSML Trigger: GAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTG...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGTTTACTGAGCACGAATaGGGAGCTAGGCTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: CSDSLFKYICSQVYNTRVFTEHE*GARLWM Trigger: CATCCAGAGCCTAGCTCCTCATTCGTGCTCAGTAAA...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATAGTCCCGCTTGGCTATaGCTTCTGGTGTGGAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: VCSQNLSHWICFSMLKLNSPAWL*LLVWSN Trigger: ATTGCTCCACACCAGAAGCCATAGCCAAGCGGGACT...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGAAAACAATCATGACATaGACTTCCTTCAACGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LKHLYPFSTATRPRGDSEKTIMT*TSFNGL Trigger: AAGGCCGTTGAAGGAAGTTCATGTCATGATTGTTTT...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGGGTCATGTCTTAAGTTaGTGTTTGGAATCTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: LKHLYPFSTATRPRGDSEGHVLS*CLESHV Trigger: GACATGAGATTCCAAACAGCAACTTAAGACATGACC...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGGAGCTGCTCATGGGATaGAAGAAATCATTTTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LKHLYPFSTATRPRGDSEELLMG*KKSFWN Trigger: ATTCCAAAATGATTTCTTGCATCCCATGAGCAGCTC...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGCTATCACTTGAAGAGTaGCATGTGGGTAGATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: CSDSLFKYICSQVYNTRVLSLEE*HVGRSD Trigger: GTCTGATCTACCCACATGCCACTCTTCAAGTGATAG...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGATTGTAGTCCTGTGGTaGGGAAATCTGATAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: CSDSLFKYICSQVYNTRVIVVLW*GNLIEC Trigger: GCACTCTATCAGATTTCCCCACCACAGGACTACAAT...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CAA 90 bp | GGAGCTTTGTGGAGACTGCTAGCTTTTGAAAGGTCATGTCTTAAGTaGCTGTTTGGAATCTCATGTCACTTCTATTATGATGAGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: GALWRLLAFERSCLK*LFGISCHFYYDEKS Trigger: GCTTTTCTCATCATAATAGAAGTGACATGAGATTCCAAACAGCAACTTAAGACATGACCTTTCAAAAGCTAGCAGTCTCCACAAAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGTGTGATGGAGCTTTGTaGAGACTGCTAGCTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: CSDSLFKYICSQVYNTRVCDGAL*RLLAFE Trigger: TTCAAAAGCTAGCAGTCTCCACAAAGCTCCATCACA...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CAA 90 bp | TACTACGCTGAGGAAAGGTGGAGATTTCTCATCAATCATTGCCTATaGATTATATATATATATGCCTTACGTTATGGTGCTTTGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: YYAEERWRFLINHCL*IIYIYALRYGALGC Trigger: GCACCCCAAAGCACCATAACGTAAGGCATATATATATATAATCAATAGGCAATGATTGATGAGAAATCTCCACCTTTCCTCAGCGTAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGATGTTGTGGAAATTCTaGGCCTGCTTTACCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: CSDSLFKYICSQVYNTRVMLWKF*ACFTIC Trigger: ACAAATGGTAAAGCAGGCTCAGAATTTCCACAACAT...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATTACGCTGAGGAAAGGTaGAGATTTCTCATCAATCAT | + |
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Preference number: 2 (lower is better) Translates to: VCSQNLSHWICFSMLKLNYAEER*RFLINH Trigger: ATGATTGATGAGAAATCTCCACCTTTCCTCAGCGTA...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGTTAAGCCATTGGATCTaGTTTTCCATGCTCAAATTA | + |
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Preference number: 2 (lower is better) Translates to: CSDSLFKYICSQVYNTRVLSHWI*FSMLKL Trigger: TAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAA...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CAA 90 bp | CCAGAGGTGATAGTGAGATCACTAAGAATAAATAAAATCTTTGGCTaGTTAATTTCTTGTAGCTCAGAACATAGCAGGCACATCCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: PEVIVRSLRINKIFG*LISCSSEHSRHIQN Trigger: ATTTTGGATGTGCCTGCTATGTTCTGAGCTACAAGAAATTAACAAGCCAAAGATTTTATTTATTCTTAGTGATCTCACTATCACCTCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 72 bp | GTGTTACACACCAAGAAGGACGGCCGTTGCCTGCTCTaGGCCCCTCCCTCCTTCGAGCTGCAAAGCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: VLHTKKDGRCLL*APPSFELQSCQ Trigger: CTGACAGCTTTGCAGCTCGAAGGAGGGAGGGGCGCAGAGCAGGCAACGGCCGTCCTTCTTGGTGTGTAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CCA 72 bp | TCTGCCTCCTCCCAAGTCCCGCTTGGCTATGGCTTCTaGTGTGGAGCAATGAGCGATGACGGAGAGATGCGC | + |
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Preference number: 3 (lower is better) Translates to: SASSQVPLGYGF*CGAMSDDGEMR Trigger: GCGCATCTCTCCGTCATCGCTCATTGCTCCACACCAGAAGCCATAGCCAAGCGGGACTTGGGAGGAGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 72 bp | TGGAGTTTAGTGTTACACACCAAGAAGGACGGCCGTTaGCTGCTCTGCGCCCCTCCCTCCTTCGAGCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: WSLVLHTKKDGR*LLCAPPSFELQ Trigger: TTGCAGCTCGAAGGAGGGAGGGGCGCAGAGCAGGCAACGGCCGTCCTTCTTGGTGTGTAACACTAAACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 72 bp | GAACTCCTGGTAATCCCCCTGCCTCAACTTCCCAAGTaGTGGCGTCACAAGTATGTACCACCACACCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: ELLVIPLPQLPK*WRHKYVPPHPA Trigger: AGCTGGGTGTGGTGGTACATACTTGTGACGCCAGCACTTGGGAAGTTGAGGCAGGGGGATTACCAGGAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR TCA 72 bp | CTGTGGCAGAGCTCACTAAACCACTCAGGCAGTCCTTaGACTCCTGGTAATCCCCCTGCCTCAACTTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LWQSSLNHSGSP*TPGNPPASTSQ Trigger: TTGGGAAGTTGAGGCAGGGGGATTACCAGGAGTTCAAGGACTGCCTGAGTGGTTTAGTGAGCTCTGCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 72 bp | CAGATCCATTTGTCTCTAATCCCCAAACTGACGTTCTaGCTCCTCCCAAGTCCCGCTTGGCTATGGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QIHLSLIPKLTF*LLPSPAWLWLL Trigger: CAGAAGCCATAGCCAAGCGGGACTTGGGAGGAGGCAGAACGTCAGTTTGGGGATTAGAGACAAATGGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 72 bp | CCTAGCACGTATCTCACAGAACCAAGTGCATCAGTGTaGCTGCTAACGCACTCCCAAGAACTAGCGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: PSTYLTEPSASV*LLTHSQELAEE Trigger: CTCTTCCGCTAGTTCTTGGGAGTGCGTTAGCAGGCACACTGATGCACTTGGTTCTGTGAGATACGTGCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGGGCACATCCAAAATGTaGACCAAAGGGGAGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWGTSKM*TKGELS Trigger: GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCC...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 72 bp | CCTCCTTCGAGCTGCAAAGCTGTCAGAAGCTCCAAATaGAAATTCGCAAAATCACAGACACAGGTGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PPSSCKAVRSSK*KFAKSQTQVCR Trigger: CCTGCACACCTGTGTCTGTGATTTTGCGAATTTGCATTTGGAGCTTCTGACAGCTTTGCAGCTCGAAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CCA 72 bp | CACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGTaGGGAAATCTGATAGAGTGCCCACTAGAAATGTCT | + |
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Preference number: 3 (lower is better) Translates to: HEWAEWLIVVLW*GNLIECPLEMS Trigger: AGACATTTCTAGTGGGCACTCTATCAGATTTCCCCACCACAGGACTACAATGAGCCATTCAGCCCACTCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR GCA 72 bp | AATTTACTGAGCACGAATGAGGAGCTAGGCTCTGGATaGCTAGCACGTATCTCACAGAACCAAGTGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: NLLSTNEELGSG*LARISQNQVHQ Trigger: CTGATGCACTTGGTTCTGTGAGATACGTGCTAGGCATCCAGAGCCTAGCTCCTCATTCGTGCTCAGTAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCATGTGGGTAGATCAGACAAGGCAGAGACAAGTTGAAATAGAAATAGGCACTCCCCACCCCCAATaGTTTCCAGATCCATTTGTC | + |
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Preference number: 3 (lower is better) Translates to: SGMWVDQTRQRQVEIEIGTPHPQ*FPDPFV Trigger: GACAAATGGATCTGGAAACAATTGGGGGTGGGGAGT...GCCTATTTCTATTTCAACTTGTCTCTGCCTTGTCTGATCTACCCACATGCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGAGGTCATGTCTTAAGTaGCTGTTTGGAATCTCATGT | + |
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Preference number: 3 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWRSCLK*LFGISC Trigger: ACATGAGATTCCAAACAGCAACTTAAGACATGACCT...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR TCA 72 bp | AGGACCATAACCTTGACTTTGAGACTGCCTAAACTGTaGCAGAAACCTTACTTCTGGGTGACCAGGGCATTG | + |
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Preference number: 3 (lower is better) Translates to: RTITLTLRLPKL*QKPYFWVTRAL Trigger: CAATGCCCTGGTCACCCAGAAGTAAGGTTTCTGTCACAGTTTAGGCAGTCTCAAAGTCAAGGTTATGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CCA 72 bp | GTTATGGTGCTTTGGGGTGCGTGTGATGGAGCTTTGTaGAGACTGCTAGCTTTTGAAAGGTCATGTCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: VMVLWGACDGAL*RLLAFERSCLK Trigger: CTTAAGACATGACCTTTCAAAAGCTAGCAGTCTCCACAAAGCTCCATCACACGCACCCCAAAGCACCATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CCA 72 bp | TTTGCAGCCAAGTATACAACACACGAGTGGGCTGAATaGCTCATTGTAGTCCTGTGGTGGGGAAATCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: FAAKYTTHEWAE*LIVVLWWGNLI Trigger: TATCAGATTTCCCCACCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGGCGTGTGATGGAGCTTaGTGGAGACTGCTAGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKHLYPFSTATRPRGDSEACDGA*WRLLAF Trigger: AAAAGCTAGCAGTCTCCACAAAGCTCCATCACACGC...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR CCA 72 bp | TCAAATATATTTGCAGCCAAGTATACAACACACGAGTaGGCTGAATGGCTCATTGTAGTCCTGTGGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SNIFAAKYTTHE*AEWLIVVLWWG Trigger: TCCCCACCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR GCA 72 bp | TCCTTCAACGGCCTTAACAGTCCTCTCAGTAGGAGCTaGTCATGGGATGCAAGAAATCATTTTGGAATGATA | + |
|
Preference number: 3 (lower is better) Translates to: SFNGLNSPLSRS*SWDARNHFGMI Trigger: TATCATTCCAAAATGATTTCTTGCATCCCATGAGCAGCTCCTACTGAGAGGACTGTTAAGGCCGTTGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR CCA 72 bp | TCTTTCACTTTTCAGGTTAGCCAGTGGGAAATAGGGTaGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFTFQVSQWEIG*PFLCNSVSGCK Trigger: CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCTAACCTGAAAAGTGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR CCA 72 bp | TCCATTGATCGTGTCTATCACTTGAAGAGTGGCATGTaGGTAGATCAGACAAGGCAGAGACAAGTTGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SIDRVYHLKSGM*VDQTRQRQVEI Trigger: TATTTCAACTTGTCTCTGCCTTGTCTGATCTACCCACATGCCACTCTTCAAGTGATAGACACGATCAATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGTGTTTCCAGATCCATTaGTCTCTAATCCCCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LKHLYPFSTATRPRGDSECFQIH*SLIPKL Trigger: CAGTTTGGGGATTAGAGACAAATGGATCTGGAAACA...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR CCA 72 bp | AACGGCCTTAACAGTCCTCTCAGTAGGAGCTGCTCATaGGATGCAAGAAATCATTTTGGAATGATAGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: NGLNSPLSRSCS*DARNHFGMIDL Trigger: TAAATCTATCATTCCAAAATGATTTCTTGCATCCCATGAGCAGCTCCTACTGAGAGGACTGTTAAGGCCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGACAAAACTTAAGCCATaGGATCTGCTTTTCCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LKHLYPFSTATRPRGDSETKLKP*DLLFHA Trigger: AGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGT...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR TCA 72 bp | TCATTCTTTTTAAGCAGGTGCAAAACAATCATGACATaGACTTCCTTCAACGGCCTTAACAGTCCTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SFFLSRCKTIMT*TSFNGLNSPLS Trigger: ACTGAGAGGACTGTTAAGGCCGTTGAAGGAAGTTCATGTCATGATTGTTTTGCACCTGCTTAAAAAGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR TCA 72 bp | CGGAAGAGTCAGCTGGTTAACGTTGGCCATTTAGAGTaGCTGTTGTGTTCAAATGGATTTGAAAAATATTTC | + |
|
Preference number: 3 (lower is better) Translates to: RKSQLVNVGHLE*LLCSNGFEKYF Trigger: GAAATATTTTTCAAATCCATTTGAACACAACAGTCACTCTAAATGGCCAACGTTAACCAGCTGACTCTTCCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGAACCATGAGCCACATTaGTCTGTTGAATACTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CSDSLFKYICSQVYNTRVNHEPH*SVEYLK Trigger: TTTCAAGTATTCAACAGACAAATGTGGCTCATGGTT...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR GCA 72 bp | TCTCATCAATCATTGCCTATTGATTATATATATATATaGCTTACGTTATGGTGCTTTGGGGTGCGTGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SHQSLPIDYIYI*LTLWCFGVRVM Trigger: CATCACACGCACCCCAAAGCACCATAACGTAAGGCATATATATATATAATCAATAGGCAATGATTGATGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR TCA 72 bp | ATGAGAACCATGAGCCACATTTGTCTGTTGAATACTTaGAATATACTACCTAGTACAACCAAAGGACTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MRTMSHICLLNT*NILPSTTKGLN Trigger: ATTCAGTCCTTTGGTTGTACTAGGTAGTATATTTCAAGTATTCAACAGACAAATGTGGCTCATGGTTCTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR TCA 72 bp | CAATTTAAAATAATTGGCAGGCATGCATGTTTAAAGTaGTCATTCAAAACACTCCTGCTCATGTCACAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QFKIIGRHACLK*SFKTLLLMSQL Trigger: TAACTGTGACATGAGCAGGAGTGTTTTGAATGATCACTTTAAACATGCATGCCTGCCAATTATTTTAAATTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGCCACGCAGGTGGCAGTaGCGCCCGCCAGCAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKPRRWQ*RPPAAA Trigger: CGCCGCTGCTGGCGGGCGTCACTGCCACCTGCGTGG...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGCCCATACCATCACGGTaGGCAGCCCAGAGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWPIPSR*AAQSAQ Trigger: CTGTGCGCTCTGGGCTGCTCACCGTGATGGTATGGG...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCAGATGGGCCCCGCGCTaGAGAAGGCCACGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAQNIAGTSKMLTKGELSRWAPR*RRPRPK Trigger: TTTGGGCCGTGGCCTTCTGCAGCGCGGGGCCCATCT...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGCCACCAGCACGAAGATaGGCCCCGCGCTGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKPPARR*APRCRR Trigger: CCTTCTGCAGCGCGGGGCCCATCTTCGTGCTGGTGG...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGGACTGTAGAGCACAGTaGGGCAGAAGACCGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWDCRAQ*GRRPAG Trigger: TCCTGCCGGTCTTCTGCCTCACTGTGCTCTACAGTC...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCTGTCCCGGGGATCTGTaGCGTTCTCGTGCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: VAQNIAGTSKMLTKGELSCPGDL*RSRAPR Trigger: GCGTGGAGCACGAGAACGGCACAGATCCCCGGGACA...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCGGTAGAGGTTGGTGGTaGTGCGCAGCTCGCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAQNIAGTSKMLTKGELSGRGWW*CAARGS Trigger: GCTTCCGCGAGCTGCGCACCACCACCAACCTCTACC...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGGTCTGTTTGTGGTTCTaGTCCCTGAGCGAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWVCLWF*SLSEEP Trigger: GGGCTCCTCGCTCAGGGACCAGAACCACAAACAGAC...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGACACCACCAGCATGGTaGGCAGGTTGCCCGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKTPPAW*AGCPRC Trigger: GCATCTCGGGCAACCTGCTCACCATGCTGGTGGTGT...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGACCAGGTTGCAGTACTaGCTGATCTGCGCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWTRLQY*LICAIS Trigger: GGAGATCGCGCAGATCAGTCAGTACTGCAACCTGGT...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGAGAGGTTGGTGGTGGTaGGCAGCTCGCGGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHLYPFSTATRPRGDSERGWWW*AARGSG Trigger: CCCGCTTCCGCGAGCTGCGCACCACCACCAACCTCT...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGGATCGGAGAAGGCCATaGTGGATAGGTAGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWDRRRP*WIGRGW Trigger: CCAACCTCTACCTATCCAGCATGGCCTTCTCCGATC...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCATAGGTAGAGGTTGGTaGTGGTGCGCAGCTCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAQNIAGTSKMLTKGELSIGRGW*WCAARG Trigger: TCCGCGAGCTGCGCACCACCACCAACCTCTACCTAT...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGCAAATCCTAGAAGTTTaGACACGGCCACCCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWQILEV*TRPPGT Trigger: AGTACCGGGTGGCCGTGTTCAAACTTCTAGGATTTG...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGTTCCAGGGCCGATACTaGCAGAGGCGGACGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKHLYPFSTATRPRGDSEFQGRY*QRRTRS Trigger: GGACCTCGTCCGCCTCTGGCAGTATCGGCCCTGGAA...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGCTCTCGCTGACAAACTaGAAGAGTTTGCAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWLSLTN*KSLQSR Trigger: CCTGCTCTGCAAACTCTTCCAGTTTGTCAGCGAGAG...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGTCACACGGCCCTTGGTaGCCACCACCTTGGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSDSLFKYICSQVYNTRVSHGPW*PPPWPA Trigger: TGCGGGCCAAGGTGGTGGTCACCAAGGGCCGTGTGA...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGCATGTGGGTAGATCAGACAAGGCAGAGACAAGTTGAAATAGAAATAGGCGCATGCACAGGAAGATaGGCAGATCGGAGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGMWVDQTRQRQVEIEIGACTGR*ADRRRP Trigger: TGGCCTTCTCCGATCTGCTCATCTTCCTGTGCATGC...GCCTATTTCTATTTCAACTTGTCTCTGCCTTGTCTGATCTACCCACATGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGGGTACTTCTTGGACATaGTGTTGTAGAGAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWGTSWT*CCREWG Trigger: ACCCCATTCTCTACAACATCATGTCCAAGAAGTACC...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGTGGATAGGTAGAGGTTaGTGGTGGTGCGCAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LKHLYPFSTATRPRGDSEWIGRG*WWCAAR Trigger: GCGAGCTGCGCACCACCACCAACCTCTACCTATCCA...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATTGGCGCGGCACTCGTTaGTGTCCCGGGGATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCSQNLSHWICFSMLKLNWRGTR*CPGDLC Trigger: GCACAGATCCCCGGGACACCAACGAGTGCCGCGCCA...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATTCTGTGCCGTTCTCGTaGTCCACGCCCACCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VCSQNLSHWICFSMLKLNSVPFS*STPTST Trigger: CGTGCTGGTGGGCGTGGAGCACGAGAACGGCACAGA...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATGCACAGCGAACTCGGTaGCGCGGCACTCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCSQNLSHWICFSMLKLNAQRTR*RGTRWC Trigger: ACACCAACGAGTGCCGCGCCACCGAGTTCGCTGTGC...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCATGTGGGTAGATCAGACAAGGCAGAGACAAGTTGAAATAGAAATAGGCCAAACTGGAAGAGTTTaGAGAGCAGGTCGCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGMWVDQTRQRQVEIEIGQTGRV*RAGRRS Trigger: ACTTCGGCGACCTGCTCTGCAAACTCTTCCAGTTTG...GCCTATTTCTATTTCAACTTGTCTCTGCCTTGTCTGATCTACCCACATGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR CAA 72 bp | TACGTTATGGTGCTTTGGGGTGCGTGTGATGGAGCTTaGTGGAGACTGCTAGCTTTTGAAAGGTCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YVMVLWGACDGA*WRLLAFERSCL Trigger: AAGACATGACCTTTCAAAAGCTAGCAGTCTCCACAAAGCTCCATCACACGCACCCCAAAGCACCATAACGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGACAGCCTATTCAAATATATTTGCAGCCAAGTATACAACACACGAGTGGGTTGCAGTACTGACTaGTCTGCGCGATCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSDSLFKYICSQVYNTRVGCSTD*SARSPE Trigger: CTCTGGAGATCGCGCAGATCAGTCAGTACTGCAACC...CACTCGTGTGTTGTATACTTGGCTGCAAATATATTTGAATAGGCTGTCACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGTTCACTGTCTGTTTGTaGTTCTGGTCCCTGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHLYPFSTATRPRGDSEFTVCL*FWSLSE Trigger: CTCGCTCAGGGACCAGAACCACAAACAGACAGTGAA...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGCAGGCTCGAAAGACTTaGAAAACAGATATCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKQARKT*KTDIFP Trigger: TGGGAAGATATCTGTTTTCCAAGTCTTTCGAGCCTG...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| 3UTR CAA 72 bp | CTTGTAGCTCAGAACATAGCAGGCACATCCAAAATGTaGACCAAAGGGGAGCTTTCCCAAACAATTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVAQNIAGTSKM*TKGELSQTIGV Trigger: GACACCAATTGTTTGGGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATGCAGCCAGCAGAGGATaGAAGCAAACACCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VCSQNLSHWICFSMLKLNAASRG*KQTPPQ Trigger: CTGTGGTGGTGTTTGCTTTCATCCTCTGCTGGCTGC...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATCGGAGAAGGCCATGCTaGATAGGTAGAGGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCSQNLSHWICFSMLKLNRRRPC*IGRGWW Trigger: CCACCAACCTCTACCTATCCAGCATGGCCTTCTCCG...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATAGATATCTTCCCACGTaGAAGGGCAGCCAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCSQNLSHWICFSMLKLNRYLPT*KGSQQR Trigger: CCTCTGCTGGCTGCCCTTCCACGTGGGAAGATATCT...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGCTCACAAAACTTAAGCCATTGGATCTGCTTTTCCATGCTCAAATTAAATAGGTGCAGCTCTCGCTaGCAAACTGGAAGAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCSQNLSHWICFSMLKLNRCSSR*QTGRVC Trigger: GCAAACTCTTCCAGTTTGTCAGCGAGAGCTGCACCT...ATTTAATTTGAGCATGGAAAAGCAGATCCAATGGCTTAAGTTTTGTGAGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS-3UTR CCA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGGTGGAAAGCTTTCTCTaGGAGAAGGATTCAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: LKHLYPFSTATRPRGDSEVESFL*EKDSNP Trigger: AGGATTTGAATCCTTCTCCCAGAGAAAGCTTTCCAC...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CAA 72 bp | AAAACACTCCTGCTCATGTCACAGTTACTGTCTATATaGAGGACCATAACCTTGACTTTGAGACTGCCTAAA | + |
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Preference number: 4 (lower is better) Translates to: KTLLLMSQLLSI*RTITLTLRLPK Trigger: TTTAGGCAGTCTCAAAGTCAAGGTTATGGTCCTCAATATAGACAGTAACTGTGACATGAGCAGGAGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| 3UTR CAA 72 bp | TGGAGACTGCTAGCTTTTGAAAGGTCATGTCTTAAGTaGCTGTTTGGAATCTCATGTCACTTCTATTATGAT | + |
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Preference number: 4 (lower is better) Translates to: WRLLAFERSCLK*LFGISCHFYYD Trigger: ATCATAATAGAAGTGACATGAGATTCCAAACAGCAACTTAAGACATGACCTTTCAAAAGCTAGCAGTCTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS GCA 90 bp | GTGGCGCGGCACTCGTTGGTGTCCCGGGGATCTGTGCCGTTCTCGTaGTCCACGCCCACCAGCACGAAGATGGGCCCCGCGCTGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: VARHSLVSRGSVPFS*STPTSTKMGPALQK Trigger: CTTCTGCAGCGCGGGGCCCATCTTCGTGCTGGTGGGCGTGGAGCACGAGAACGGCACAGATCCCCGGGACACCAACGAGTGCCGCGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS GCA 90 bp | CAGCGAACTCGGTGGCGCGGCACTCGTTGGTGTCCCGGGGATCTGTaGCGTTCTCGTGCTCCACGCCCACCAGCACGAAGATGGGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: QRTRWRGTRWCPGDL*RSRAPRPPARRWAP Trigger: CGGGGCCCATCTTCGTGCTGGTGGGCGTGGAGCACGAGAACGGCACAGATCCCCGGGACACCAACGAGTGCCGCGCCACCGAGTTCGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 90 bp | CGCCAGCAGCGGCGCGGGGAACAGTGGCAGCAGTTCGTCAGAGAGTaGGTCGTTGCCGGGAGAAGCGTCCCAGTCCAGGTCCAGCGTGAC | + |
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Preference number: 5 (lower is better) Translates to: RQQRRGEQWQQFVRE*VVAGRSVPVQVQRD Trigger: GTCACGCTGGACCTGGACTGGGACGCTTCTCCCGGCAACGACTCACTCTCTGACGAACTGCTGCCACTGTTCCCCGCGCCGCTGCTGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 90 bp | GCAAACACCACCACAGCAAGCATCTTCACTGTCTGTTTGTGGTTCTaGTCCCTGAGCGAGGAGCCCACCGCCGCGTCGCCGCGCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: ANTTTASIFTVCLWF*SLSEEPTAASPRLR Trigger: GCGGAGGCGCGGCGACGCGGCGGTGGGCTCCTCGCTCAGGGACCAGAACCACAAACAGACAGTGAAGATGCTTGCTGTGGTGGTGTTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 90 bp | AGACCGGCAGGAAGAAGAAGACGCTCGACACCCATACCATCACGGTaGGCAGCCCAGAGCGCACAGCGAACTCGGTGGCGCGGCACTCGT | + |
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Preference number: 5 (lower is better) Translates to: RPAGRRRRSTPIPSR*AAQSAQRTRWRGTR Trigger: ACGAGTGCCGCGCCACCGAGTTCGCTGTGCGCTCTGGGCTGCTCACCGTGATGGTATGGGTGTCGAGCGTCTTCTTCTTCCTGCCGGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS GCA 90 bp | TGGAAGAGTTTGCAGAGCAGGTCGCCGAAGTTCCAGGGCCGATACTaGCAGAGGCGGACGAGGTCCAGCGGCATGCACAGGAAGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: WKSLQSRSPKFQGRY*QRRTRSSGMHRKMS Trigger: GCTCATCTTCCTGTGCATGCCGCTGGACCTCGTCCGCCTCTGGCAGTATCGGCCCTGGAACTTCGGCGACCTGCTCTGCAAACTCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 90 bp | ATGAAAGCAAACACCACCACAGCAAGCATCTTCACTGTCTGTTTGTaGTTCTGGTCCCTGAGCGAGGAGCCCACCGCCGCGTCGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: MKANTTTASIFTVCL*FWSLSEEPTAASPR Trigger: GCGCGGCGACGCGGCGGTGGGCTCCTCGCTCAGGGACCAGAACCACAAACAGACAGTGAAGATGCTTGCTGTGGTGGTGTTTGCTTTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS-3UTR CAA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCAGCTTCACACGGCCCTaGGTGACCACCACCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VAQNIAGTSKMLTKGELSSFTRP*VTTTLA Trigger: GGCCAAGGTGGTGGTCACCAAGGGCCGTGTGAAGCT...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 90 bp | GTCCAGGCCCGGGAACTCTCATCCTTCAGAGTGGAAAGCTTTCTCTaGGAGAAGGATTCAAATCCTAGAAGTTTGAACACGGCCACCCGG | + |
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Preference number: 5 (lower is better) Translates to: VQARELSSFRVESFL*EKDSNPRSLNTATR Trigger: CCGGGTGGCCGTGTTCAAACTTCTAGGATTTGAATCCTTCTCCCAGAGAAAGCTTTCCACTCTGAAGGATGAGAGTTCCCGGGCCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS-3UTR CAA 90 bp | CTCAAACATCTTTATCCATTTTCCACAGCAACAAGACCCAGAGGTGATAGTGAGGTGGCGCGGCACTCGTaGGTGTCCCGGGGATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LKHLYPFSTATRPRGDSEVARHS*VSRGSV Trigger: CACAGATCCCCGGGACACCAACGAGTGCCGCGCCAC...CTCACTATCACCTCTGGGTCTTGTTGCTGTGGAAAATGGATAAAGATGTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCAAGTATACAACACACGAGTGGGCTGAATGGCTCATTGTAGTCCTGTGGTCAAATCCTAGAAGTTaGAACACGGCCACCCGGTAC | + |
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Preference number: 5 (lower is better) Translates to: AAKYTTHEWAEWLIVVLWSNPRS*NTATRY Trigger: GTACCGGGTGGCCGTGTTCAAACTTCTAGGATTTGA...CCACAGGACTACAATGAGCCATTCAGCCCACTCGTGTGTTGTATACTTGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGTGGGAAATAGGGTGGCCCTTTCTCTGTAATTCAGTCTCAGGATGTAAGACAAACTGGAAGAGTTaGCAGAGCAGGTCGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: SQWEIGWPFLCNSVSGCKTNWKS*QSRSPK Trigger: CTTCGGCGACCTGCTCTGCAAACTCTTCCAGTTTGT...CTTACATCCTGAGACTGAATTACAGAGAAAGGGCCACCCTATTTCCCACTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS-3UTR CAA 90 bp | GTAGCTCAGAACATAGCAGGCACATCCAAAATGTTGACCAAAGGGGAGCTTTCCCCAGGCTCGAAAGACTaGGAAAACAGATATCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: VAQNIAGTSKMLTKGELSPGSKD*ENRYLP Trigger: GGGAAGATATCTGTTTTCCAAGTCTTTCGAGCCTGG...GGAAAGCTCCCCTTTGGTCAACATTTTGGATGTGCCTGCTATGTTCTGAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS-3UTR CAA 90 bp | TTCATAATTATGATGACCAAGGAGACTAGAACTCCATTGATCGTGTCTATCACTATCTTCACTGTCTGTTaGTGGTTCTGGTCCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: FIIMMTKETRTPLIVSITIFTVC*WFWSLS Trigger: GCTCAGGGACCAGAACCACAAACAGACAGTGAAGAT...AGTGATAGACACGATCAATGGAGTTCTAGTCTCCTTGGTCATCATAATTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CAA 90 bp | GTGAGCAGCCCAGAGCGCACAGCGAACTCGGTGGCGCGGCACTCGTaGGTGTCCCGGGGATCTGTGCCGTTCTCGTGCTCCACGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: VSSPERTANSVARHS*VSRGSVPFSCSTPT Trigger: GGTGGGCGTGGAGCACGAGAACGGCACAGATCCCCGGGACACCAACGAGTGCCGCGCCACCGAGTTCGCTGTGCGCTCTGGGCTGCTCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS GCA 72 bp | CACTCGTTGGTGTCCCGGGGATCTGTGCCGTTCTCGTaGTCCACGCCCACCAGCACGAAGATGGGCCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: HSLVSRGSVPFS*STPTSTKMGPA Trigger: CGCGGGGCCCATCTTCGTGCTGGTGGGCGTGGAGCACGAGAACGGCACAGATCCCCGGGACACCAACGAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS GCA 72 bp | CGGTGGCGCGGCACTCGTTGGTGTCCCGGGGATCTGTaGCGTTCTCGTGCTCCACGCCCACCAGCACGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RWRGTRWCPGDL*RSRAPRPPARR Trigger: TCTTCGTGCTGGTGGGCGTGGAGCACGAGAACGGCACAGATCCCCGGGACACCAACGAGTGCCGCGCCACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 72 bp | TGCGCAGCTCGCGGAAGCGGGACACCACCAGCATGGTaGGCAGGTTGCCCGAGATGCCCACCACGAAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: CAARGSGTPPAW*AGCPRCPPRRA Trigger: CGCTCTTCGTGGTGGGCATCTCGGGCAACCTGCTCACCATGCTGGTGGTGTCCCGCTTCCGCGAGCTGCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 72 bp | CAGAGCGCACAGCGAACTCGGTGGCGCGGCACTCGTTaGTGTCCCGGGGATCTGTGCCGTTCTCGTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: QSAQRTRWRGTR*CPGDLCRSRAP Trigger: TGGAGCACGAGAACGGCACAGATCCCCGGGACACCAACGAGTGCCGCGCCACCGAGTTCGCTGTGCGCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 72 bp | CGGCGCGGGGAACAGTGGCAGCAGTTCGTCAGAGAGTaGGTCGTTGCCGGGAGAAGCGTCCCAGTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RRGEQWQQFVRE*VVAGRSVPVQV Trigger: GACCTGGACTGGGACGCTTCTCCCGGCAACGACTCACTCTCTGACGAACTGCTGCCACTGTTCCCCGCGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 72 bp | CAAGCATCTTCACTGTCTGTTTGTGGTTCTGGTCCCTaGGCGAGGAGCCCACCGCCGCGTCGCCGCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QASSLSVCGSGP*ARSPPPRRRAS Trigger: GGAGGCGCGGCGACGCGGCGGTGGGCTCCTCGCTCAGGGACCAGAACCACAAACAGACAGTGAAGATGCTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS GCA 72 bp | TTGCAGAGCAGGTCGCCGAAGTTCCAGGGCCGATACTaGCAGAGGCGGACGAGGTCCAGCGGCATGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: LQSRSPKFQGRY*QRRTRSSGMHR Trigger: CCTGTGCATGCCGCTGGACCTCGTCCGCCTCTGGCAGTATCGGCCCTGGAACTTCGGCGACCTGCTCTGCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CAA 90 bp | AGCGGCGCGGGGAACAGTGGCAGCAGTTCGTCAGAGAGTGAGTCGTaGCCGGGAGAAGCGTCCCAGTCCAGGTCCAGCGTGACGTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: SGAGNSGSSSSESES*PGEASQSRSSVTLG Trigger: GCCTAACGTCACGCTGGACCTGGACTGGGACGCTTCTCCCGGCAACGACTCACTCTCTGACGAACTGCTGCCACTGTTCCCCGCGCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 72 bp | CGGAGAAGGCCATGCTGGATAGGTAGAGGTTGGTGGTaGTGCGCAGCTCGCGGAAGCGGGACACCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RRRPCWIGRGWW*CAARGSGTPPA Trigger: TGCTGGTGGTGTCCCGCTTCCGCGAGCTGCGCACCACCACCAACCTCTACCTATCCAGCATGGCCTTCTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 72 bp | GGAAGAAGAAGACGCTCGACACCCATACCATCACGGTaGGCAGCCCAGAGCGCACAGCGAACTCGGTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GRRRRSTPIPSR*AAQSAQRTRWR Trigger: GCGCCACCGAGTTCGCTGTGCGCTCTGGGCTGCTCACCGTGATGGTATGGGTGTCGAGCGTCTTCTTCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 72 bp | GATCGGAGAAGGCCATGCTGGATAGGTAGAGGTTGGTaGTGGTGCGCAGCTCGCGGAAGCGGGACACCACCA | + |
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Preference number: 6 (lower is better) Translates to: DRRRPCWIGRGW*WCAARGSGTPP Trigger: TGGTGGTGTCCCGCTTCCGCGAGCTGCGCACCACCACCAACCTCTACCTATCCAGCATGGCCTTCTCCGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CAA 72 bp | GGGAACAGTGGCAGCAGTTCGTCAGAGAGTGAGTCGTaGCCGGGAGAAGCGTCCCAGTCCAGGTCCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GNSGSSSSESES*PGEASQSRSSV Trigger: CACGCTGGACCTGGACTGGGACGCTTCTCCCGGCAACGACTCACTCTCTGACGAACTGCTGCCACTGTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 72 bp | AACACCACCACAGCAAGCATCTTCACTGTCTGTTTGTaGTTCTGGTCCCTGAGCGAGGAGCCCACCGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: NTTTASIFTVCL*FWSLSEEPTAA Trigger: CGCGGCGGTGGGCTCCTCGCTCAGGGACCAGAACCACAAACAGACAGTGAAGATGCTTGCTGTGGTGGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CAA 90 bp | AGGATGAAAGCAAACACCACCACAGCAAGCATCTTCACTGTCTGTTaGTGGTTCTGGTCCCTGAGCGAGGAGCCCACCGCCGCGTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: RMKANTTTASIFTVC*WFWSLSEEPTAASP Trigger: CGGCGACGCGGCGGTGGGCTCCTCGCTCAGGGACCAGAACCACAAACAGACAGTGAAGATGCTTGCTGTGGTGGTGTTTGCTTTCATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 72 bp | AGAGGCGGACGAGGTCCAGCGGCATGCACAGGAAGATaGGCAGATCGGAGAAGGCCATGCTGGATAGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RGGRGPAACTGR*ADRRRPCWIGR Trigger: TCTACCTATCCAGCATGGCCTTCTCCGATCTGCTCATCTTCCTGTGCATGCCGCTGGACCTCGTCCGCCTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CAA 72 bp | GCAAACACCACCACAGCAAGCATCTTCACTGTCTGTTaGTGGTTCTGGTCCCTGAGCGAGGAGCCCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: ANTTTASIFTVC*WFWSLSEEPTA Trigger: GGCGGTGGGCTCCTCGCTCAGGGACCAGAACCACAAACAGACAGTGAAGATGCTTGCTGTGGTGGTGTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 72 bp | TCTGCGCGATCTCCAGAGAGCCAGGCTCGAAAGACTTaGAAAACAGATATCTTCCCACGTGGAAGGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SARSPESQARKT*KTDIFPRGRAA Trigger: GGCTGCCCTTCCACGTGGGAAGATATCTGTTTTCCAAGTCTTTCGAGCCTGGCTCTCTGGAGATCGCGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS TCA 72 bp | AGAAGAGGACAAAGGACACCAGGTTGCAGTACTGACTaGTCTGCGCGATCTCCAGAGAGCCAGGCTCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RRGQRTPGCSTD*SARSPESQARK Trigger: CTTTCGAGCCTGGCTCTCTGGAGATCGCGCAGATCAGTCAGTACTGCAACCTGGTGTCCTTTGTCCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CAA 72 bp | ATCTGCGCGATCTCCAGAGAGCCAGGCTCGAAAGACTaGGAAAACAGATATCTTCCCACGTGGAAGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ICAISREPGSKD*ENRYLPTWKGS Trigger: GCTGCCCTTCCACGTGGGAAGATATCTGTTTTCCAAGTCTTTCGAGCCTGGCTCTCTGGAGATCGCGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CAA 72 bp | AGCTTTCTCTGGGAGAAGGATTCAAATCCTAGAAGTTaGAACACGGCCACCCGGTACTTCTTGGACATGATG | + |
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Preference number: 6 (lower is better) Translates to: SFLWEKDSNPRS*NTATRYFLDMM Trigger: CATCATGTCCAAGAAGTACCGGGTGGCCGTGTTCAAACTTCTAGGATTTGAATCCTTCTCCCAGAGAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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| CDS CCA 72 bp | CGGGAACTCTCATCCTTCAGAGTGGAAAGCTTTCTCTaGGAGAAGGATTCAAATCCTAGAAGTTTGAACACG | + |
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Preference number: 6 (lower is better) Translates to: RELSSFRVESFL*EKDSNPRSLNT Trigger: CGTGTTCAAACTTCTAGGATTTGAATCCTTCTCCCAGAGAAAGCTTTCCACTCTGAAGGATGAGAGTTCCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057186.2 |
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