Pregenerated sensors for GHRL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064177Ensembl transcript IDs: ENSMUST00000064993.8, ENSMUST00000203363.3, ENSMUST00000203588.2, ENSMUST00000203770.3, ENSMUST00000204163.3, ENSMUST00000204533.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GAGTGCTGGGAGTTGCCGAGGAGGCTGAGGCGGATGTaGGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ECWELPRRLRRM*VLAQEKESTGV Trigger: GACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCCCAGCACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204533.3 |
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| CDS-3UTR CCA 90 bp | GCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGCCTCTGTCCTCTGGGTaGAGCCAGCCTTCCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: ADVSSCSGEGKHGGQACPPLSSG*SQPSRA Trigger: AGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGAGG...CGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCCCTCTGTCCTCTGGGTaGAGCCAGCCTTCCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: AEADVSSCSGEGKHGGQAPLSSG*SQPSRA Trigger: AGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGAGG...GGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCCAGGAAGCTGGAGCCTaGCATGGCCATGTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: AEADVSSCSGEGKHGGQAQEAGA*HGHVHP Trigger: TGGATGGACATGGCCATGGCAGGCTCCAGCTTCCTG...GGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGGCTGGGCTCAGGAAGCTaGAGCCTGCCATGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: DVSSCSGEGKHGGQACPWLGSGS*SLPWPC Trigger: ACATGGCCATGGCAGGCTCCAGCTTCCTGAGCCCAG...CCACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAACCTCTGTCCTCTGGGTaGAGCCAGCCTTCCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VLGVAEEAEADVSSCSGEPLSSG*SQPSRA Trigger: AGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGAGG...TTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CCA 90 bp | GGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGCCTCTGTCCTCTGGGTaGAGCCAGCCTTCCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GCEFLLRRRKARGSGLSVPLSSG*SQPSRA Trigger: AGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGAGG...CACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR TCA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGAGCTCCTGACAGCTTaGTGCCAACATCGAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AEEAEADVSSCSGEGKHGELLTA*CQHRRE Trigger: CTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTC...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGAGCTCCTGACAGCTTaGTGCCAACATCGAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GGCEFLLRRRKARGSGLSELLTA*CQHRRE Trigger: CTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTC...GGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTCCCAGAGGATATCCTaGAGAAACTTCCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADVSSCSGEGKHGGQACPSQRIS*RNFPRA Trigger: GGCCCTGGGGAAGTTTCTTCAGGATATCCTCTGGGA...CGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTCCCAGAGGATATCCTaGAGAAACTTCCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEADVSSCSGEGKHGGQASQRIS*RNFPRA Trigger: GGCCCTGGGGAAGTTTCTTCAGGATATCCTCTGGGA...GGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGCAGCTGGCGCCTCTTTaGCCTCTTCCCAGAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: AEEAEADVSSCSGEGKHGQLAPL*PLPRGY Trigger: ATATCCTCTGGGAAGAGGTCAAAGAGGCGCCAGCTG...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCCAGCTGGCGCCTCTTTaGCCTCTTCCCAGAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: GGCEFLLRRRKARGSGLSQLAPL*PLPRGY Trigger: ATATCCTCTGGGAAGAGGTCAAAGAGGCGCCAGCTG...GGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR GCA 90 bp | GGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGCAGGAAGCTGGAGCCTaGCATGGCCATGTCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCEFLLRRRKARGSGLSVQEAGA*HGHVHP Trigger: TGGATGGACATGGCCATGGCAGGCTCCAGCTTCCTG...CACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGGCAGGAAGCTGGAGCCTaGCATGGCCATGTCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVSSCSGEGKHGGQACPWQEAGA*HGHVHP Trigger: TGGATGGACATGGCCATGGCAGGCTCCAGCTTCCTG...CCACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGTGCTGGGCTTTCTGGTaGTCTGGGCTCAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAEADVSSCSGEGKHGGQCWAFW*SGLRKL Trigger: CAGCTTCCTGAGCCCAGAGCACCAGAAAGCCCAGCA...CTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 |
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| CDS-3UTR GCA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGTCCAGAGCTCGTGGCTaGAGTTTAGCTGGTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AEEAEADVSSCSGEGKHGSRARG*SLAGGF Trigger: GAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGA...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTAGCTGGAGCCTGCCATaGCCATGTCCATCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EEAEADVSSCSGEGKHGGSWSLP*PCPSRA Trigger: TGCTCTGGATGGACATGGCCATGGCAGGCTCCAGCT...ACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGGAGCTGGAGCCTGCCATaGCCATGTCCATCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVSSCSGEGKHGGQACPWSWSLP*PCPSRA Trigger: TGCTCTGGATGGACATGGCCATGGCAGGCTCCAGCT...CCACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTAGCTGGAGCCTGCCATaGCCATGTCCATCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EADVSSCSGEGKHGGQACSWSLP*PCPSRA Trigger: TGCTCTGGATGGACATGGCCATGGCAGGCTCCAGCT...ACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR TCA 90 bp | GAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTGAGCTCCTGACAGCTTaGTGCCAACATCGAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EADVSSCSGEGKHGGQACELLTA*CQHRRE Trigger: CTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTC...ACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTGAGCTCCTGACAGCTTaGTGCCAACATCGAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EEAEADVSSCSGEGKHGGELLTA*CQHRRE Trigger: CTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTC...ACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGGTCCCAGAGGATATCCTaGAGAAACTTCCCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DVSSCSGEGKHGGQACPWSQRIS*RNFPRA Trigger: GGCCCTGGGGAAGTTTCTTCAGGATATCCTCTGGGA...CCACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGCAGCTGGCGCCTCTTTaGCCTCTTCCCAGAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: EAEADVSSCSGEGKHGGQQLAPL*PLPRGY Trigger: ATATCCTCTGGGAAGAGGTCAAAGAGGCGCCAGCTG...CTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCAGGAAGCTGGAGCCTaGCATGGCCATGTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: GVAEEAEADVSSCSGEGKQEAGA*HGHVHP Trigger: TGGATGGACATGGCCATGGCAGGCTCCAGCTTCCTG...CTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTTCCAGAGCTCGTGGCTaGAGTTTAGCTGGTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EADVSSCSGEGKHGGQACSRARG*SLAGGF Trigger: GAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGA...ACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGCTCCTCTGTCTCTTCTaGTTGTCCTCTGTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AEEAEADVSSCSGEGKHGLLCLF*LSSVLW Trigger: CCAGAGGACAGAGGACAAGCAGAAGAGACAGAGGAG...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACAGCTGGAGCCTGCCATaGCCATGTCCATCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VAEEAEADVSSCSGEGKHSWSLP*PCPSRA Trigger: TGCTCTGGATGGACATGGCCATGGCAGGCTCCAGCT...GTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGATTCCTTTCTCTGCTaGGCTTTCTGGTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AEEAEADVSSCSGEGKHGDSFLC*AFWCSG Trigger: CCCAGAGCACCAGAAAGCCCAGCAGAGAAAGGAATC...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR TCA 90 bp | GGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCCTGATACTGAGCTCCTaGCAGCTTGATGCCAACATC | + |
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Preference number: 4 (lower is better) Translates to: GGCEFLLRRRKARGSGLSLILSS*QLDANI Trigger: GATGTTGGCATCAAGCTGTCAGGAGCTCAGTATCAG...GGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACTCCCAGAGGATATCCTaGAGAAACTTCCCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VAEEAEADVSSCSGEGKHSQRIS*RNFPRA Trigger: GGCCCTGGGGAAGTTTCTTCAGGATATCCTCTGGGA...GTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR TCA 90 bp | GGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCAGCTGGCGCCTCTTTaGCCTCTTCCCAGAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: GVAEEAEADVSSCSGEGKQLAPL*PLPRGY Trigger: ATATCCTCTGGGAAGAGGTCAAAGAGGCGCCAGCTG...CTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS-3UTR GCA 90 bp | GTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACTCCAGAGCTCGTGGCTaGAGTTTAGCTGGTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VAEEAEADVSSCSGEGKHSRARG*SLAGGF Trigger: GAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGA...GTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAACTCCTCTGTCTCTTCTaGTTGTCCTCTGTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLGVAEEAEADVSSCSGELLCLF*LSSVLW Trigger: CCAGAGGACAGAGGACAAGCAGAAGAGACAGAGGAG...TTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR GCA 90 bp | GGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGCTCCTCTGTCTCTTCTaGTTGTCCTCTGTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCEFLLRRRKARGSGLSVLLCLF*LSSVLW Trigger: CCAGAGGACAGAGGACAAGCAGAAGAGACAGAGGAG...CACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAGATTCCTTTCTCTGCTaGGCTTTCTGGTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LGVAEEAEADVSSCSGEGDSFLC*AFWCSG Trigger: CCCAGAGCACCAGAAAGCCCAGCAGAGAAAGGAATC...TCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CCA 90 bp | GTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACTGGTTACTTGTCAGCTaGCGCCTCCTGATCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VAEEAEADVSSCSGEGKHWLLVS*RLLISS Trigger: GCTGGAGATCAGGAGGCGCCAGCTGACAAGTAACCA...GTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203363.3 |
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| CDS-3UTR GCA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGTTGGATTCCTTTCTCTaGTGGGCTTTCTGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: AEEAEADVSSCSGEGKHGLDSFL*WAFWCS Trigger: AGAGCACCAGAAAGCCCAGCAGAGAAAGGAATCCAA...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CCA 90 bp | GGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCTGGCTGCAGTTTAGCTaGTGGCTTCTTGGATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GGCEFLLRRRKARGSGLSWLQFS*WLLGFL Trigger: AAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCA...GGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGTTGGATTCCTTTCTCTaGGCTTTCTGGTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EAEADVSSCSGEGKHGGQLDSFL*AFWCSG Trigger: CCCAGAGCACCAGAAAGCCCAGAGAAAGGAATCCAA...CTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAATTGGATTCCTTTCTCTaGTGGGCTTTCTGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLGVAEEAEADVSSCSGELDSFL*WAFWCS Trigger: AGAGCACCAGAAAGCCCAGCAGAGAAAGGAATCCAA...TTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCCCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CCA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGCTGCAGTTTAGCTGGTaGCTTCTTGGATTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: AEEAEADVSSCSGEGKHGLQFSW*LLGFLS Trigger: AGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAG...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGATGGCTGCAGTTTAGCTaGTGGCTTCTTGGATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGVAEEAEADVSSCSGEGWLQFS*WLLGFL Trigger: AAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCA...TCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CCA 90 bp | GGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGTGGCTGCAGTTTAGCTaGTGGCTTCTTGGATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GCEFLLRRRKARGSGLSVWLQFS*WLLGFL Trigger: AAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCA...CACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGTTGGATTCCTTTCTCTaGTGGGCTTTCTGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GVAEEAEADVSSCSGEGKLDSFL*WAFWCS Trigger: AGAGCACCAGAAAGCCCAGCAGAGAAAGGAATCCAA...CTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CCA 90 bp | GATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGGCTGCAGTTTAGCTGGTaGCTTCTTGGATTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DVSSCSGEGKHGGQACPWLQFSW*LLGFLS Trigger: AGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAG...CCACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCTGCAGTTTAGCTGGTaGCTTCTTGGATTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EADVSSCSGEGKHGGQACLQFSW*LLGFLS Trigger: AGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAG...ACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGTGGCTGCAGTTTAGCTaGTGGCTTCTTGGATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GVAEEAEADVSSCSGEGKWLQFS*WLLGFL Trigger: AAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCA...CTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCTGCAGTTTAGCTGGTaGCTTCTTGGATTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GVAEEAEADVSSCSGEGKLQFSW*LLGFLS Trigger: AGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAG...CTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS-3UTR CAA 90 bp | GCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGCTCTGTCTCTTCTGCTaGTCCTCTGTCCTCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: AEEAEADVSSCSGEGKHGLCLFC*SSVLWV Trigger: CACCCAGAGGACAGAGGACAAGCAGAAGAGACAGAG...CCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS CCA 90 bp | TGCTTGTCCTCTGTCCTCTGGGTGGAGCCAGCCTTCCAGAGCTCGTaGCTGCAGTTTAGCTGGTGGCTTCTTGGATTCCTTTCTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: CLSSVLWVEPAFQSS*LQFSWWLLGFLSLG Trigger: GCCCAGAGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGAGGACAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204163.3 |
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| CDS-3UTR CAA 90 bp | GGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTGCTCTGTCTCTTCTGCTaGTCCTCTGTCCTCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GCEFLLRRRKARGSGLSVLCLFC*SSVLWV Trigger: CACCCAGAGGACAGAGGACAAGCAGAAGAGACAGAG...CACGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS GCA 90 bp | TGTCCTCTGTCCTCTGGGTGGAGCCAGCCTTCCAGAGCTCGTGGCTaGAGTTTAGCTGGTGGCTTCTTGGATTCCTTTCTCTGGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: CPLSSGWSQPSRARG*SLAGGFLDSFLWAF Trigger: GAAAGCCCAGAGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204163.3 |
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| CDS CCA 90 bp | TGCTTGTCCTCTGTCCTCTGGGTGGAGCCAGCCTTCCAGAGCTCGTaGCTGCAGTTTAGCTGGTGGCTTCTTGGATTCCTTTCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CLSSVLWVEPAFQSS*LQFSWWLLGFLSLL Trigger: CAGCAGAGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGAGGACAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CAA 90 bp | GCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTCCGTTAGCTGGTGGCTTCTaGGATTCCTTTCTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ADVSSCSGEGKHGGQACPLAGGF*DSFLCW Trigger: CCAGCAGAGAAAGGAATCCAAGAAGCCACCAGCTAA...CGGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 |
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| CDS-3UTR CAA 90 bp | CTGGGAGTTGCCGAGGAGGCTGAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGATTAGCTGGTGGCTTCTaGGATTCCTTTCTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGVAEEAEADVSSCSGEGLAGGF*DSFLCW Trigger: CCAGCAGAGAAAGGAATCCAAGAAGCCACCAGCTAA...TCCTTCTCCTGAGCAAGAACTCACATCCGCCTCAGCCTCCTCGGCAACTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 |
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| CDS-3UTR CAA 90 bp | GAGGCGGATGTGAGTTCTTGCTCAGGAGAAGGAAAGCACGGGGGTCAGGCCTGTTTAGCTGGTGGCTTCTaGGATTCCTTTCTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: EADVSSCSGEGKHGGQACLAGGF*DSFLCW Trigger: CCAGCAGAGAAAGGAATCCAAGAAGCCACCAGCTAA...ACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATCCGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 |
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| CDS TCA 90 bp | AAGAAACTTCCCCAGGGCCCGGCCATGCTGCTGATACTGAGCTCCTaGCAGCTTGATGCCAACATCGAAGGGAGCATTGAACCTGATCTC | + |
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Preference number: 5 (lower is better) Translates to: KKLPQGPAMLLILSS*QLDANIEGSIEPDL Trigger: GAGATCAGGTTCAATGCTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTCAGTATCAGCAGCATGGCCGGGCCCTGGGGAAGTTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064993.8 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS TCA 90 bp | AAGAAACTTCCCCAGGGCCCGGCCATGCTGCTGATACTGAGCTCCTaGCAGCTTGATGCCAACATCGAAGGGAGCATTGAACTGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KKLPQGPAMLLILSS*QLDANIEGSIELGF Trigger: AAAGCCCAGTTCAATGCTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTCAGTATCAGCAGCATGGCCGGGCCCTGGGGAAGTTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203588.2 |
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| CDS TCA 90 bp | AAGAAACTTCCCCAGGGCCCGGCCATGCTGCTGATACTGAGCTCCTaGCAGCTTGATGCCAACATCGAAGGGAGCATTGAACTTAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: KKLPQGPAMLLILSS*QLDANIEGSIELSK Trigger: TTTGCTAAGTTCAATGCTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTCAGTATCAGCAGCATGGCCGGGCCCTGGGGAAGTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204533.3 |
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| CDS TCA 72 bp | CCCCAGGGCCCGGCCATGCTGCTGATACTGAGCTCCTaGCAGCTTGATGCCAACATCGAAGGGAGCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: PQGPAMLLILSS*QLDANIEGSIE Trigger: TTCAATGCTCCCTTCGATGTTGGCATCAAGCTGTCAGGAGCTCAGTATCAGCAGCATGGCCGGGCCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064993.8 ENSMUST00000203588.2 ENSMUST00000203770.3 ENSMUST00000204163.3 ENSMUST00000204533.3 |
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| CDS GCA 72 bp | TCCTCTGGGTGGAGCCAGCCTTCCAGAGCTCGTGGCTaGAGTTTAGCTGGTGGCTTCTTGGATTCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSGWSQPSRARG*SLAGGFLDSFL Trigger: GAGAAAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGAAGGCTGGCTCCACCCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS CCA 72 bp | TCTGTCCTCTGGGTGGAGCCAGCCTTCCAGAGCTCGTaGCTGCAGTTTAGCTGGTGGCTTCTTGGATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SVLWVEPAFQSS*LQFSWWLLGFL Trigger: AAGGAATCCAAGAAGCCACCAGCTAAACTGCAGCCACGAGCTCTGGAAGGCTGGCTCCACCCAGAGGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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| CDS TCA 72 bp | TGGAGCCTGCCATGGCCATGTCCATCCAGAGCATGCTaGGTAGCAGCAAACTGCAGATGGTGCCTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: WSLPWPCPSRAC*VAANCRWCLKT Trigger: TGTCTTCAGGCACCATCTGCAGTTTGCTGCTACTCAGCATGCTCTGGATGGACATGGCCATGGCAGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064993.8 ENSMUST00000203363.3 ENSMUST00000203588.2 ENSMUST00000203770.3 ENSMUST00000204163.3 |
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