Pregenerated sensors for GHRH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027643Ensembl transcript IDs: ENSMUST00000029172.2, ENSMUST00000109536.8
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCGGGGGGCAGTGAGCAGTaGGAGCCACTGGTGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: EKVRAEAEVTGYSCVWGSGGSEQ*EPLVRM Trigger: CATCCTCACCAGTGGCTCCCACTGCTCACTGCCCCC...CGAGCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR TCA 90 bp | GAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCGTGTCTTCCTGGCGGCTaGGCCTGGCCCTTTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EKVRAEAEVTGYSCVWGSCLPGG*AWPFVP Trigger: AGGAACAAAGGGCCAGGCTCAGCCGCCAGGAAGACA...CGAGCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CCA 90 bp | AGGACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGCACATGCTGTCTTCCTaGCGGCTGAGCCTGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RTEKVRAEAEVTGYSCVWHMLSS*RLSLAL Trigger: AAGGGCCAGGCTCAGCCGCCAGGAAGACAGCATGTG...CCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR GCA 90 bp | ACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCGCATCTACGTGTCGCTaGATCCTGAAGGGAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TEKVRAEAEVTGYSCVWGASTCR*ILKGGE Trigger: CTCACCTCCCTTCAGGATGCAGCGACACGTAGATGC...GCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR GCA 90 bp | ACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCCTCTCCAGGGTCATCTaGTTGTCCTCTGTCCACATG | + |
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Preference number: 4 (lower is better) Translates to: TEKVRAEAEVTGYSCVWGLSRVI*LSSVHM Trigger: CATGTGGACAGAGGACAAGCAGATGACCCTGGAGAG...GCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR GCA 90 bp | GAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCGGGAATCCCTGCAAGATaGTCTCCAGGGTCATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EKVRAEAEVTGYSCVWGSGIPAR*SPGSSA Trigger: AGCAGATGACCCTGGAGAGCATCTTGCAGGGATTCC...CGAGCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR GCA 90 bp | GAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCGATCCTTGGGAATCCCTaGAAGATGCTCTCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: EKVRAEAEVTGYSCVWGSILGNP*KMLSRV Trigger: GACCCTGGAGAGCATCTTGCAGGGATTCCCAAGGAT...CGAGCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR GCA 90 bp | ACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCATCCTTGGGAATCCCTaGAAGATGCTCTCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TEKVRAEAEVTGYSCVWGILGNP*KMLSRV Trigger: GACCCTGGAGAGCATCTTGCAGGGATTCCCAAGGAT...GCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR TCA 90 bp | ACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCCTGTAGTTGGTGGTaGAGATGGCATCTACGTGTC | + |
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Preference number: 4 (lower is better) Translates to: TEKVRAEAEVTGYSCVWGSCSWW*RWHLRV Trigger: GACACGTAGATGCCATCTTCACCACCAACTACAGGA...GCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR TCA 90 bp | GAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCGCCCCTTGCTTGTTCATaGTGTCCTGGATCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: EKVRAEAEVTGYSCVWGSPLACS*CPGSLS Trigger: GGAAAGTGATCCAGGACATCATGAACAAGCAAGGGG...CGAGCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR GCA 90 bp | AGGACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGCTCTCCAGGGTCATCTaGTTGTCCTCTGTCCACATG | + |
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Preference number: 4 (lower is better) Translates to: RTEKVRAEAEVTGYSCVWLSRVI*LSSVHM Trigger: CATGTGGACAGAGGACAAGCAGATGACCCTGGAGAG...CCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR GCA 90 bp | AGGACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGAATCCCTGCAAGATaGTCTCCAGGGTCATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RTEKVRAEAEVTGYSCVWGIPAR*SPGSSA Trigger: AGCAGATGACCCTGGAGAGCATCTTGCAGGGATTCC...CCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR TCA 90 bp | AGGACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGCCCCTTGCTTGTTCATaGTGTCCTGGATCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RTEKVRAEAEVTGYSCVWPLACS*CPGSLS Trigger: GGAAAGTGATCCAGGACATCATGAACAAGCAAGGGG...CCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CCA 90 bp | ACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTTGTTCATGATGTCCTaGATCACTTTCCGGGCATAC | + |
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Preference number: 4 (lower is better) Translates to: TEKVRAEAEVTGYSCVWGLFMMS*ITFRAY Trigger: GTATGCCCGGAAAGTGATCCAGGACATCATGAACAA...GCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CCA 90 bp | AGGACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGTTGTTCATGATGTCCTaGATCACTTTCCGGGCATAC | + |
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Preference number: 4 (lower is better) Translates to: RTEKVRAEAEVTGYSCVWLFMMS*ITFRAY Trigger: GTATGCCCGGAAAGTGATCCAGGACATCATGAACAA...CCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS CCA 90 bp | GTCCACATGCTGTCTTCCTGGCGGCTGAGCCTGGCCCTTTGTTCCTaGATCCTCTCCCCTTGCTTGTTCATGATGTCCTGGATCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: VHMLSSWRLSLALCS*ILSPCLFMMSWITF Trigger: GAAAGTGATCCAGGACATCATGAACAAGCAAGGGGAGAGGATCCAGGAACAAAGGGCCAGGCTCAGCCGCCAGGAAGACAGCATGTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CAA 90 bp | AGGACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGCTGAGCCTGGCCCTTaGTTCCTGGATCCTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: RTEKVRAEAEVTGYSCVWAEPGP*FLDPLP Trigger: GGGGAGAGGATCCAGGAACAAAGGGCCAGGCTCAGC...CCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CAA 90 bp | GAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCGCTGGATCCTCTCCCCTaGCTTGTTCATGATGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: EKVRAEAEVTGYSCVWGSLDPLP*LVHDVL Trigger: CAGGACATCATGAACAAGCAAGGGGAGAGGATCCAG...CGAGCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CAA 90 bp | ACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCCTGGATCCTCTCCCCTaGCTTGTTCATGATGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TEKVRAEAEVTGYSCVWGLDPLP*LVHDVL Trigger: CAGGACATCATGAACAAGCAAGGGGAGAGGATCCAG...GCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CAA 90 bp | ACGGAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCATCCTCTCCCCTTGCTaGTTCATGATGTCCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: TEKVRAEAEVTGYSCVWGILSPC*FMMSWI Trigger: GATCCAGGACATCATGAACAAGCAAGGGGAGAGGAT...GCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS-3UTR CAA 90 bp | GAAAAGGTCAGAGCTGAAGCAGAAGTAACAGGGTACAGTTGTGTTTGGGGCTCGATCCTCTCCCCTTGCTaGTTCATGATGTCCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: EKVRAEAEVTGYSCVWGSILSPC*FMMSWI Trigger: GATCCAGGACATCATGAACAAGCAAGGGGAGAGGAT...CGAGCCCCAAACACAACTGTACCCTGTTACTTCTGCTTCAGCTCTGACCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS CCA 72 bp | CTGTCTTCCTGGCGGCTGAGCCTGGCCCTTTGTTCCTaGATCCTCTCCCCTTGCTTGTTCATGATGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSSWRLSLALCS*ILSPCLFMMSW Trigger: CCAGGACATCATGAACAAGCAAGGGGAGAGGATCCAGGAACAAAGGGCCAGGCTCAGCCGCCAGGAAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS CAA 90 bp | GTCCTCTGTCCACATGCTGTCTTCCTGGCGGCTGAGCCTGGCCCTTaGTTCCTGGATCCTCTCCCCTTGCTTGTTCATGATGTCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: VLCPHAVFLAAEPGP*FLDPLPLLVHDVLD Trigger: ATCCAGGACATCATGAACAAGCAAGGGGAGAGGATCCAGGAACAAAGGGCCAGGCTCAGCCGCCAGGAAGACAGCATGTGGACAGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS CAA 72 bp | GCTGAGCCTGGCCCTTTGTTCCTGGATCCTCTCCCCTaGCTTGTTCATGATGTCCTGGATCACTTTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: AEPGPLFLDPLP*LVHDVLDHFPG Trigger: GCCCGGAAAGTGATCCAGGACATCATGAACAAGCAAGGGGAGAGGATCCAGGAACAAAGGGCCAGGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS CAA 72 bp | CCACATGCTGTCTTCCTGGCGGCTGAGCCTGGCCCTTaGTTCCTGGATCCTCTCCCCTTGCTTGTTCATGAT | + |
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Preference number: 6 (lower is better) Translates to: PHAVFLAAEPGP*FLDPLPLLVHD Trigger: ATCATGAACAAGCAAGGGGAGAGGATCCAGGAACAAAGGGCCAGGCTCAGCCGCCAGGAAGACAGCATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS GCA 72 bp | CTGAGCCTGGCCCTTTGTTCCTGGATCCTCTCCCCTTaGTTGTTCATGATGTCCTGGATCACTTTCCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSLALCSWILSP*LFMMSWITFRA Trigger: TGCCCGGAAAGTGATCCAGGACATCATGAACAAGCAAGGGGAGAGGATCCAGGAACAAAGGGCCAGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS GCA 72 bp | CCGCTGAAGGCTTCATCCTTGGGAATCCCTGCAAGATaGTCTCCAGGGTCATCTGCTTGTCCTCTGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: PLKASSLGIPAR*SPGSSACPLST Trigger: TGTGGACAGAGGACAAGCAGATGACCCTGGAGAGCATCTTGCAGGGATTCCCAAGGATGAAGCCTTCAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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| CDS TCA 72 bp | CCCTTTGTTCCTGGATCCTCTCCCCTTGCTTGTTCATaGTGTCCTGGATCACTTTCCGGGCATACAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PFVPGSSPLACS*CPGSLSGHTAG Trigger: GCCAGCTGTATGCCCGGAAAGTGATCCAGGACATCATGAACAAGCAAGGGGAGAGGATCCAGGAACAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029172.2 ENSMUST00000109536.8 |
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