Pregenerated sensors for GHITM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041028Ensembl transcript IDs: ENSMUST00000042564.17, ENSMUST00000165649.4, ENSMUST00000224769.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGGGTAAAAGGTGCTTGCTACTCTGAGCTCAACAATCTGAGCTaGAAACTTGAGATCCATTGGTGGGAAGTTGTCCCCCAGGATACC | + |
|
Preference number: 1 (lower is better) Translates to: QWVKGACYSELNNLS*KLEIHWWEVVPQDT Trigger: GGTATCCTGGGGGACAACTTCCCACCAATGGATCTCAAGTTTTCAGCTCAGATTGTTGAGCTCAGAGTAGCAAGCACCTTTTACCCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR CCA 90 bp | ATAAGAATCAGTCAAGATGCAAATGGAGGCCGGCCATCTAGTCACTaGTCTCCTGTCTTAGCAGACTGCAGGAATGCAGGCACAGGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: IRISQDANGGRPSSH*SPVLADCRNAGTGK Trigger: TTTTCCTGTGCCTGCATTCCTGCAGTCTGCTAAGACAGGAGACCAGTGACTAGATGGCCGGCCTCCATTTGCATCTTGACTGATTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR CCA 90 bp | ACATCTCTGATGTCTTTCACTGGCTCACCACAATCAGTGTTGTCCTaGGCATTCAAACTGACTGCAGGTGCCTTTTATCTCTCTGACCTC | + |
|
Preference number: 1 (lower is better) Translates to: TSLMSFTGSPQSVLS*AFKLTAGAFYLSDL Trigger: GAGGTCAGAGAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGCCAGTGAAAGACATCAGAGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR GCA 90 bp | AACCGAACAGCAACAGCTAAAATTCACACAATGCCCAGTCATGTCTaGATTCACTCCACAGGAGGATGTTGTCTCCATCTTACAGGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: NRTATAKIHTMPSHV*IHSTGGCCLHLTGE Trigger: CTCACCTGTAAGATGGAGACAACATCCTCCTGTGGAGTGAATGCAGACATGACTGGGCATTGTGTGAATTTTAGCTGTTGCTGTTCGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR TCA 90 bp | CTTTCACTGGCTCACCACAATCAGTGTTGTCCTGGGCATTCAAACTaGCTGCAGGTGCCTTTTATCTCTCTGACCTCTATACAAAAACTT | + |
|
Preference number: 1 (lower is better) Translates to: LSLAHHNQCCPGHSN*LQVPFISLTSIQKL Trigger: AAGTTTTTGTATAGAGGTCAGAGAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGCCAGTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR TCA 90 bp | AATACTTCCCAAGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTaGGAGGGAACGGAGGAAGCCAACAGTTTTAGAAGAAAAACCAAT | + |
|
Preference number: 1 (lower is better) Translates to: NTSQGQLSLLCSCLS*EGTEEANSFRRKTN Trigger: ATTGGTTTTTCTTCTAAAACTGTTGGCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTGGGAAGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR TCA 90 bp | AAACTGGCTCAGTGGGTAAAAGGTGCTTGCTACTCTGAGCTCAACAATCTGAGCCCTGGGCATTCAAACTaGCTGCAGGTGCCTTTTATC | + |
|
Preference number: 2 (lower is better) Translates to: KLAQWVKGACYSELNNLSPGHSN*LQVPFI Trigger: GATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGG...GCTCAGATTGTTGAGCTCAGAGTAGCAAGCACCTTTTACCCACTGAGCCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR-3UTR TCA 90 bp | AATGCAGGCACAGGAAAAGCTCAAGCTGCTTTCGTATCCGAGACTCTGCTGAGACTTGTTCCACATCTCTaGTGTCTTTCACTGGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NAGTGKAQAAFVSETLLRLVPHL*CLSLAH Trigger: GTGAGCCAGTGAAAGACATCAGAGATGTGGAACAAG...TCTCAGCAGAGTCTCGGATACGAAAGCAGCTTGAGCTTTTCCTGTGCCTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | CACACATCTGACAGCAAAGGAGTCTTGAGCTTTGGAGTAGTACATCATACCGAGAGATCTGCTTGCCTCTaGCTCCCAGATGATGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: HTSDSKGVLSFGVVHHTERSACL*LPDDGT Trigger: AGTCCCATCATCTGGGAGGCAGAGGCAAGCAGATCT...CTCGGTATGATGTACTACTCCAAAGCTCAAGACTCCTTTGCTGTCAGATGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | CACAATGCCCAGTCATGTCTGCATTCACTCCACAGGAGGATGTTGTCTCCATCTAAGAATCAGTCAAGATaGAAATGGAGGCCGGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: HNAQSCLHSLHRRMLSPSKNQSR*KWRPAI Trigger: GATGGCCGGCCTCCATTTGCATCTTGACTGATTCTT...AGATGGAGACAACATCCTCCTGTGGAGTGAATGCAGACATGACTGGGCATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCTCCTGTCTTAGCAGACTGCAGGAATGCAGGCACAGGAAAAGCTCAAGCTCAATCAGTGTTGTCCTaGGCATTCAAACTGACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: WSPVLADCRNAGTGKAQAQSVLS*AFKLTA Trigger: TGCAGTCAGTTTGAATGCCCAGGACAACACTGATTG...AGCTTGAGCTTTTCCTGTGCCTGCATTCCTGCAGTCTGCTAAGACAGGAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR CAA 90 bp | TGTTCCACATCTCTGATGTCTTTCACTGGCTCACCACAATCAGTGTaGTCCTGGGCATTCAAACTGACTGCAGGTGCCTTTTATCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CSTSLMSFTGSPQSV*SWAFKLTAGAFYLS Trigger: AGAGAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGCCAGTGAAAGACATCAGAGATGTGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | AATGCAGGCACAGGAAAAGCTCAAGCTGCTTTCGTATCCGAGACTCTGCTGAGACTAAAAGAAAAGGCATaGCTGAAGGGTCGCATTACT | + |
|
Preference number: 2 (lower is better) Translates to: NAGTGKAQAAFVSETLLRLKEKA*LKGRIT Trigger: AGTAATGCGACCCTTCAGGCATGCCTTTTCTTTTAG...TCTCAGCAGAGTCTCGGATACGAAAGCAGCTTGAGCTTTTCCTGTGCCTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | TATGTCACAAGGAAGCTGAGCACCTCCCCATTCCAGTTTTCATTCAAATACTTCATGGGACTAAAGGTGTaGGCCACCACCAACCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: YVTRKLSTSPFQFSFKYFMGLKV*ATTNLL Trigger: AAGCAGGTTGGTGGTGGCGCACACCTTTAGTCCCAT...GAAGTATTTGAATGAAAACTGGAATGGGGAGGTGCTCAGCTTCCTTGTGACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR TCA 90 bp | CACCACAAACAAGTGATCTGTATTAAAATCTTATGTCACAAGGAAGCTGAGCACAAGAAAAGGCATGCCTaGAGGGTCGCATTACTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HHKQVICIKILCHKEAEHKKRHA*RVALLH Trigger: GTGCAGTAATGCGACCCTTCAGGCATGCCTTTTCTT...GTGCTCAGCTTCCTTGTGACATAAGATTTTAATACAGATCACTTGTTTGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR TCA 90 bp | ACGGAGGAAGCCAACAGTTTTAGAAGAAAAACCAATCCTAATCTTAGCATAAGCAAGAAAAGGCATGCCTaGAGGGTCGCATTACTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: TEEANSFRRKTNPNLSISKKRHA*RVALLH Trigger: GTGCAGTAATGCGACCCTTCAGGCATGCCTTTTCTT...GCTTATGCTAAGATTAGGATTGGTTTTTCTTCTAAAACTGTTGGCTTCCTCCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCAAGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGACTAAAAGAAAAGGCATaGCTGAAGGGTCGCATTACT | + |
|
Preference number: 2 (lower is better) Translates to: FPRSTKFALFMLKLRGNGLKEKA*LKGRIT Trigger: AGTAATGCGACCCTTCAGGCATGCCTTTTCTTTTAG...TCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | GCACCTCCCCATTCCAGTTTTCATTCAAATACTTCCCAAGGTCAACTAAGTTTGGGCATTCAAACTGACTaGAGGTGCCTTTTATCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: APPHSSFHSNTSQGQLSLGIQTD*RCLLSL Trigger: GAGAGATAAAAGGCACCTGCAGTCAGTTTGAATGCC...CAAACTTAGTTGACCTTGGGAAGTATTTGAATGAAAACTGGAATGGGGAGGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | GCACCTCCCCATTCCAGTTTTCATTCAAATACTTCCCAAGGTCAACTAAGTTTGTTGAATTTAGAGATCTaGTTGCCTCTGCCTCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: APPHSSFHSNTSQGQLSLLNLEI*LPLPPR Trigger: TCTGGGAGGCAGAGGCAAGCAGATCTCTAAATTCAA...CAAACTTAGTTGACCTTGGGAAGTATTTGAATGAAAACTGGAATGGGGAGGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR TCA 90 bp | CACACATCTGACAGCAAAGGAGTCTTGAGCTTTGGAGTAGTACATCATACCGAGTGCCTTTTATCTCTCTaGCCTCTATACAAAAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: HTSDSKGVLSFGVVHHTECLLSL*PLYKNL Trigger: CAAGTTTTTGTATAGAGGTCAGAGAGATAAAAGGCA...CTCGGTATGATGTACTACTCCAAAGCTCAAGACTCCTTTGCTGTCAGATGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR CCA 90 bp | GCACCTCCCCATTCCAGTTTTCATTCAAATACTTCCCAAGGTCAACTAAGTTTGCAGAGATTCTCTGTATaGTTAACACTCTGGACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: APPHSSFHSNTSQGQLSLQRFSV*LTLWTV Trigger: GACAGTCCAGAGTGTTAACCATACAGAGAATCTCTG...CAAACTTAGTTGACCTTGGGAAGTATTTGAATGAAAACTGGAATGGGGAGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR CAA 90 bp | TTCCAGTTTTCATTCAAATACTTCCCAAGGTCAACTAAGTTTGCTTaGTTCATGCTTAAGCTGAGAGGGAACGGAGGAAGCCAACAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FQFSFKYFPRSTKFA*FMLKLRGNGGSQQF Trigger: AAACTGTTGGCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTGGGAAGTATTTGAATGAAAACTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR GCA 90 bp | GCACCTCCCCATTCCAGTTTTCATTCAAATACTTCCCAAGGTCAACTAAGTTTGGCCACTGAAATATTCTaGAGGCTTCCACAATATGAA | + |
|
Preference number: 2 (lower is better) Translates to: APPHSSFHSNTSQGQLSLATEIF*RLPQYE Trigger: TTCATATTGTGGAAGCCTGCAGAATATTTCAGTGGC...CAAACTTAGTTGACCTTGGGAAGTATTTGAATGAAAACTGGAATGGGGAGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR TCA 90 bp | TATGTCACAAGGAAGCTGAGCACCTCCCCATTCCAGTTTTCATTCAAATACTTCTGCCTTTTATCTCTCTaGCCTCTATACAAAAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: YVTRKLSTSPFQFSFKYFCLLSL*PLYKNL Trigger: CAAGTTTTTGTATAGAGGTCAGAGAGATAAAAGGCA...GAAGTATTTGAATGAAAACTGGAATGGGGAGGTGCTCAGCTTCCTTGTGACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR GCA 72 bp | CGGCCATCTAGTCACTGGTCTCCTGTCTTAGCAGACTaGAGGAATGCAGGCACAGGAAAAGCTCAAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPSSHWSPVLAD*RNAGTGKAQAA Trigger: AGCAGCTTGAGCTTTTCCTGTGCCTGCATTCCTGCAGTCTGCTAAGACAGGAGACCAGTGACTAGATGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR CCA 72 bp | AGTCAAGATGCAAATGGAGGCCGGCCATCTAGTCACTaGTCTCCTGTCTTAGCAGACTGCAGGAATGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQDANGGRPSSH*SPVLADCRNAG Trigger: GCCTGCATTCCTGCAGTCTGCTAAGACAGGAGACCAGTGACTAGATGGCCGGCCTCCATTTGCATCTTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR GCA 72 bp | CTTGCCTCTGCCTCCCAGATGATGGGACTAAAGGTGTaGGCCACCACCAACCTGCTTGTTCTAAAGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LASASQMMGLKV*ATTNLLVLKTS Trigger: TGAAGTCTTTAGAACAAGCAGGTTGGTGGTGGCGCACACCTTTAGTCCCATCATCTGGGAGGCAGAGGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR GCA 72 bp | AGACTGCAGGAATGCAGGCACAGGAAAAGCTCAAGCTaGTTTCGTATCCGAGACTCTGCTGAGATGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLQECRHRKSSS*FRIRDSAEMDW Trigger: CCAGTCCATCTCAGCAGAGTCTCGGATACGAAAGCAGCTTGAGCTTTTCCTGTGCCTGCATTCCTGCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR TCA 72 bp | GCTCACCACAATCAGTGTTGTCCTGGGCATTCAAACTaGCTGCAGGTGCCTTTTATCTCTCTGACCTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: AHHNQCCPGHSN*LQVPFISLTSI Trigger: TATAGAGGTCAGAGAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR TCA 72 bp | AGATCCATTGGTGGGAAGTTGTCCCCCAGGATACCATaGCATGTGTGTACCCACAAATGTAAAAGAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSIGGKLSPRIP*HVCTHKCKRSL Trigger: GAGGCTTCTTTTACATTTGTGGGTACACACATGTCATGGTATCCTGGGGGACAACTTCCCACCAATGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR TCA 72 bp | AAAGGTGCTTGCTACTCTGAGCTCAACAATCTGAGCTaGAAACTTGAGATCCATTGGTGGGAAGTTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KGACYSELNNLS*KLEIHWWEVVP Trigger: GGGGACAACTTCCCACCAATGGATCTCAAGTTTTCAGCTCAGATTGTTGAGCTCAGAGTAGCAAGCACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR CCA 72 bp | ATGTCTTTCACTGGCTCACCACAATCAGTGTTGTCCTaGGCATTCAAACTGACTGCAGGTGCCTTTTATCTC | + |
|
Preference number: 3 (lower is better) Translates to: MSFTGSPQSVLS*AFKLTAGAFYL Trigger: GAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGCCAGTGAAAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCAAGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGATCACCACAATCAGTGTaGTCCTGGGCATTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: FPRSTKFALFMLKLRGNGSPQSV*SWAFKL Trigger: CAGTTTGAATGCCCAGGACAACACTGATTGTGGTGA...TCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR GCA 72 bp | GCAACAGCTAAAATTCACACAATGCCCAGTCATGTCTaGATTCACTCCACAGGAGGATGTTGTCTCCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: ATAKIHTMPSHV*IHSTGGCCLHL Trigger: AAGATGGAGACAACATCCTCCTGTGGAGTGAATGCAGACATGACTGGGCATTGTGTGAATTTTAGCTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| 3UTR-3UTR CAA 90 bp | TATGTCACAAGGAAGCTGAGCACCTCCCCATTCCAGTTTTCATTCAAATACTTCTCACCACAATCAGTGTaGTCCTGGGCATTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: YVTRKLSTSPFQFSFKYFSPQSV*SWAFKL Trigger: CAGTTTGAATGCCCAGGACAACACTGATTGTGGTGA...GAAGTATTTGAATGAAAACTGGAATGGGGAGGTGCTCAGCTTCCTTGTGACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR TCA 72 bp | CAAGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTaGGAGGGAACGGAGGAAGCCAACAGTTTTAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QGQLSLLCSCLS*EGTEEANSFRR Trigger: TCTTCTAAAACTGTTGGCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR-3UTR CAA 90 bp | ACGGAGGAAGCCAACAGTTTTAGAAGAAAAACCAATCCTAATCTTAGCATAAGCATTAGAGACAGGTCCTaGTCTGGCTTGGAACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: TEEANSFRRKTNPNLSISIRDRS*SGLELT Trigger: AGTGAGTTCCAAGCCAGACAAGGACCTGTCTCTAAT...GCTTATGCTAAGATTAGGATTGGTTTTTCTTCTAAAACTGTTGGCTTCCTCCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR GCA 72 bp | CAAAAACTTGTCACTCATGATGCCACTGAAATATTCTaGAGGCTTCCACAATATGAAGACACGCAAATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QKLVTHDATEIF*RLPQYEDTQIC Trigger: GCAAATTTGCGTGTCTTCATATTGTGGAAGCCTGCAGAATATTTCAGTGGCATCATGAGTGACAAGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | TGGTCTCCTGTCTTAGCAGACTGCAGGAATGCAGGCACAGGAAAAGCTCAAGCTACCATACATTGCCACTaGGTACAGAGTGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPVLADCRNAGTGKAQATIHCH*VQSGTS Trigger: GCTGGTGCCACTCTGTACTCAGTGGCAATGTATGGT...AGCTTGAGCTTTTCCTGTGCCTGCATTCCTGCAGTCTGCTAAGACAGGAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CCACAATCAGTGTTGTCCTGGGCATTCAAACTGACTGCAGGTGCCTTTTATCTCAGCATCCAAGCCAGATaGTTTGGGCCTGGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQSVLSWAFKLTAGAFYLSIQAR*FGPGLC Trigger: GCAGAGCCCAGGCCCAAAGCATCTGGCTTGGATGCT...GAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | AGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGAGGAAGCAGCATCCAAGCCAGATaGTTTGGGCCTGGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTKFALFMLKLRGNGGSSIQAR*FGPGLC Trigger: GCAGAGCCCAGGCCCAAAGCATCTGGCTTGGATGCT...GCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CCACAATCAGTGTTGTCCTGGGCATTCAAACTGACTGCAGGTGCCTTTTATCTCCAGAGGAGCCACAACTaGACCCATCACACCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PQSVLSWAFKLTAGAFYLQRSHN*THHTRM Trigger: CATTCTGGTGTGATGGGTGCAGTTGTGGCTCCTCTG...GAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGCTCACCACAATCAGTGTTGTCCTGGGCATTCAAACTGACTGCAGGTGCCGGAATTCTTCACAAGTaGAGAGGCCTTGGTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGSPQSVLSWAFKLTAGAGILHK*RGLGDE Trigger: TTCATCACCAAGGCCTCTCCACTTGTGAAGAATTCC...GGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | AGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGAGGAAGCCCAAGCCAGATGCTTTaGGCCTGGGCTCTGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RSTKFALFMLKLRGNGGSPSQML*AWALLI Trigger: TATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGG...GCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | ACTGGCTCACCACAATCAGTGTTGTCCTGGGCATTCAAACTGACTGCAGGTGCCATGGGATCATACTTTTaGGCTCCATACATGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSPQSVLSWAFKLTAGAMGSYF*APYMGV Trigger: AACACCCATGTATGGAGCTCAAAAGTATGATCCCAT...GGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | TCACTCATGATGCCACTGAAATATTCTGCAGGCTTCCACAATATGAAGACACGCCCAAGCCAGATGCTTTaGGCCTGGGCTCTGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLMMPLKYSAGFHNMKTRPSQML*AWALLI Trigger: TATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGG...GCGTGTCTTCATATTGTGGAAGCCTGCAGAATATTTCAGTGGCATCATGAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR CAA 72 bp | TCTCTGATGTCTTTCACTGGCTCACCACAATCAGTGTaGTCCTGGGCATTCAAACTGACTGCAGGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLMSFTGSPQSV*SWAFKLTAGAF Trigger: AAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGGTGAGCCAGTGAAAGACATCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR CAA 72 bp | ATCCGTGTCTTTGTTAACCCCACATTTGGTGGTCCCTaGTTCCACATCTCTGATGTCTTTCACTGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: IRVFVNPTFGGP*FHISDVFHWLT Trigger: GGTGAGCCAGTGAAAGACATCAGAGATGTGGAACAAGGGACCACCAAATGTGGGGTTAACAAAGACACGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | TGGTCTCCTGTCTTAGCAGACTGCAGGAATGCAGGCACAGGAAAAGCTCAAGCTGCCATTGGTTCTTTGTaGTGGAATTCTTCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WSPVLADCRNAGTGKAQAAIGSL*WNSSQV Trigger: CACTTGTGAAGAATTCCATCACAAAGAACCAATGGC...AGCTTGAGCTTTTCCTGTGCCTGCATTCCTGCAGTCTGCTAAGACAGGAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | TTCCCAAGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGACAGAGGAGCCACAACTaGACCCATCACACCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FPRSTKFALFMLKLRGNGQRSHN*THHTRM Trigger: CATTCTGGTGTGATGGGTGCAGTTGTGGCTCCTCTG...TCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | TATGTCACAAGGAAGCTGAGCACCTCCCCATTCCAGTTTTCATTCAAATACTTCACCATACATTGCCACTaGGTACAGAGTGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVTRKLSTSPFQFSFKYFTIHCH*VQSGTS Trigger: GCTGGTGCCACTCTGTACTCAGTGGCAATGTATGGT...GAAGTATTTGAATGAAAACTGGAATGGGGAGGTGCTCAGCTTCCTTGTGACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CCACAATCAGTGTTGTCCTGGGCATTCAAACTGACTGCAGGTGCCTTTTATCTCTTTGGGCCTGGGCTCTaGTCATATGATATTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQSVLSWAFKLTAGAFYLFGPGL*SYDIEC Trigger: ACACTCAATATCATATGAGCAGAGCCCAGGCCCAAA...GAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | TATGTCACAAGGAAGCTGAGCACCTCCCCATTCCAGTTTTCATTCAAATACTTCCCCATCACACCAGAATaGAGCATCCAAGCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YVTRKLSTSPFQFSFKYFPITPE*SIQARC Trigger: GCATCTGGCTTGGATGCTGCATTCTGGTGTGATGGG...GAAGTATTTGAATGAAAACTGGAATGGGGAGGTGCTCAGCTTCCTTGTGACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | GTCGCATTACTGCACATTTTAAACATGGTGACAGGCTATCTTCTAAACCTCAAGGCCCACTCCCAGGGGTaGTCCCATGTTCAGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VALLHILNMVTGYLLNLKAHSQG*SHVQKL Trigger: AAGTTTCTGAACATGGGAGCACCCCTGGGAGTGGGC...CTTGAGGTTTAGAAGATAGCCTGTCACCATGTTTAAAATGTGCAGTAATGCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | TTCCCAAGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGATTCCAGCTCCAATCATaGCTGCAAAGGTCGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPRSTKFALFMLKLRGNGFQLQS*LQRSHQ Trigger: TTGGTGCGACCTTTGCAGCCATGATTGGAGCTGGAA...TCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CATGGTGACAGGCTATCTTCTAAACCTCAAGGAATTCTGCTGATGCAAACTGTAAGGTGTTCTGGCTACTaGCAAGGCAGACAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGDRLSSKPQGILLMQTVRCSGY*QGRQSC Trigger: ACAGCTTTGTCTGCCTTGGCAGTAGCCAGAACACCT...TACAGTTTGCATCAGCAGAATTCCTTGAGGTTTAGAAGATAGCCTGTCACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | TGTAATGACTATCTGCTCCTATTAAACAAGCAAGACATCAGTGAGCGGAGACATCCCATCACACCAGAATaGAGCATCCAAGCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CNDYLLLLNKQDISERRHPITPE*SIQARC Trigger: GCATCTGGCTTGGATGCTGCATTCTGGTGTGATGGG...ATGTCTCCGCTCACTGATGTCTTGCTTGTTTAATAGGAGCAGATAGTCATTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR CAA 72 bp | CTGCATATACACCACACATCTGACAGCAAAGGAGTCTaGAGCTTTGGAGTAGTACATCATACCGAGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHIHHTSDSKGV*SFGVVHHTEHS Trigger: GCTATGCTCGGTATGATGTACTACTCCAAAGCTCAAGACTCCTTTGCTGTCAGATGTGTGGTGTATATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CCTCACCACAAACAAGTGATCTGTATTAAAATCTTATGTCACAAGGAAGCTGAGTCCAAGACCAACAGCTaGTCCTCCAGCAACAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PHHKQVICIKILCHKEAESKTNS*SSSNKP Trigger: TGGTTTGTTGCTGGAGGAGCAGCTGTTGGTCTTGGA...CTCAGCTTCCTTGTGACATAAGATTTTAATACAGATCACTTGTTTGTGGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CACCACAAACAAGTGATCTGTATTAAAATCTTATGTCACAAGGAAGCTGAGCACTCCAAGACCAACAGCTaGTCCTCCAGCAACAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: HHKQVICIKILCHKEAEHSKTNS*SSSNKP Trigger: TGGTTTGTTGCTGGAGGAGCAGCTGTTGGTCTTGGA...GTGCTCAGCTTCCTTGTGACATAAGATTTTAATACAGATCACTTGTTTGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CCTCACCACAAACAAGTGATCTGTATTAAAATCTTATGTCACAAGGAAGCTGAGAGGTGTTCTGGCTACTaGCAAGGCAGACAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHHKQVICIKILCHKEAERCSGY*QGRQSC Trigger: ACAGCTTTGTCTGCCTTGGCAGTAGCCAGAACACCT...CTCAGCTTCCTTGTGACATAAGATTTTAATACAGATCACTTGTTTGTGGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | CATGGTGACAGGCTATCTTCTAAACCTCAAGGAATTCTGCTGATGCAAACTGTAGGAATTCTTCACAAGTaGAGAGGCCTTGGTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGDRLSSKPQGILLMQTVGILHK*RGLGDE Trigger: TTCATCACCAAGGCCTCTCCACTTGTGAAGAATTCC...TACAGTTTGCATCAGCAGAATTCCTTGAGGTTTAGAAGATAGCCTGTCACCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| 3UTR CAA 72 bp | TCATTCAAATACTTCCCAAGGTCAACTAAGTTTGCTTaGTTCATGCTTAAGCTGAGAGGGAACGGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFKYFPRSTKFA*FMLKLRGNGGS Trigger: GCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCTTGGGAAGTATTTGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | AGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGAGGAAGCCGTTTGATTACTTTCTaGGTATCATACAGAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSTKFALFMLKLRGNGGSRLITF*VSYRRN Trigger: GTTCCTTCTGTATGATACTCAGAAAGTAATCAAACG...GCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | TGTTTGTTTGCTTGTATTAGAGACAGGTCCTTGTCTGGCTTGGAACTCACTTTGATGGGATCATACTTTTaGGCTCCATACATGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLFACIRDRSLSGLELTLMGSYF*APYMGV Trigger: AACACCCATGTATGGAGCTCAAAAGTATGATCCCAT...CAAAGTGAGTTCCAAGCCAGACAAGGACCTGTCTCTAATACAAGCAAACAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | AGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGAGGAAGCCATGGGTGTTATTTCTaGACGTTTGATTACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTKFALFMLKLRGNGGSHGCYF*TFDYFL Trigger: CAGAAAGTAATCAAACGTGCAGAAATAACACCCATG...GCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | GCAAACTGTAATGACTATCTGCTCCTATTAAACAAGCAAGACATCAGTGAGCGGGGTGTTACGAGCCATTaGTTCTTTGTGATGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ANCNDYLLLLNKQDISERGVTSH*FFVMEF Trigger: GAATTCCATCACAAAGAACCAATGGCTCGTAACACC...CCGCTCACTGATGTCTTGCTTGTTTAATAGGAGCAGATAGTCATTACAGTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | GCAAACTGTAATGACTATCTGCTCCTATTAAACAAGCAAGACATCAGTGAGCGGTTTGAGCTCCATACATaGGTGTTATTTCTGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: ANCNDYLLLLNKQDISERFELHT*VLFLHV Trigger: AACGTGCAGAAATAACACCCATGTATGGAGCTCAAA...CCGCTCACTGATGTCTTGCTTGTTTAATAGGAGCAGATAGTCATTACAGTTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | CCTCACCACAAACAAGTGATCTGTATTAAAATCTTATGTCACAAGGAAGCTGAGGCCATTGGTTCTTTGTaGTGGAATTCTTCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHHKQVICIKILCHKEAEAIGSL*WNSSQV Trigger: CACTTGTGAAGAATTCCATCACAAAGAACCAATGGC...CTCAGCTTCCTTGTGACATAAGATTTTAATACAGATCACTTGTTTGTGGTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | ACGGAGGAAGCCAACAGTTTTAGAAGAAAAACCAATCCTAATCTTAGCATAAGCGGTGTTACGAGCCATTaGTTCTTTGTGATGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TEEANSFRRKTNPNLSISGVTSH*FFVMEF Trigger: GAATTCCATCACAAAGAACCAATGGCTCGTAACACC...GCTTATGCTAAGATTAGGATTGGTTTTTCTTCTAAAACTGTTGGCTTCCTCCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCGCATTACTGCACATTTTAAACATGGTGACAGGCTATCTTCTAAACCTTTTGAGCTCCATACATaGGTGTTATTTCTGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGRITAHFKHGDRLSSKPFELHT*VLFLHV Trigger: AACGTGCAGAAATAACACCCATGTATGGAGCTCAAA...AGGTTTAGAAGATAGCCTGTCACCATGTTTAAAATGTGCAGTAATGCGACCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | CACCACAAACAAGTGATCTGTATTAAAATCTTATGTCACAAGGAAGCTGAGCACACAGAAGGAACATGCTaGAAAGAACTAATCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HHKQVICIKILCHKEAEHTEGTC*KELIHH Trigger: ATGGTGGATTAGTTCTTTTCAGCATGTTCCTTCTGT...GTGCTCAGCTTCCTTGTGACATAAGATTTTAATACAGATCACTTGTTTGTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR TCA 90 bp | ACGGAGGAAGCCAACAGTTTTAGAAGAAAAACCAATCCTAATCTTAGCATAAGCCGTTTGATTACTTTCTaGGTATCATACAGAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEEANSFRRKTNPNLSISRLITF*VSYRRN Trigger: GTTCCTTCTGTATGATACTCAGAAAGTAATCAAACG...GCTTATGCTAAGATTAGGATTGGTTTTTCTTCTAAAACTGTTGGCTTCCTCCGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR GCA 90 bp | CCTCACCACAAACAAGTGATCTGTATTAAAATCTTATGTCACAAGGAAGCTGAGCATGGGTGTTATTTCTaGACGTTTGATTACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHHKQVICIKILCHKEAEHGCYF*TFDYFL Trigger: CAGAAAGTAATCAAACGTGCAGAAATAACACCCATG...CTCAGCTTCCTTGTGACATAAGATTTTAATACAGATCACTTGTTTGTGGTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 90 bp | CCCCAGAGAAGACGCAAAGACAAGACCCAGGCCCACTCCCAGGGGTaGTCCCATGTTCAGAAACTTCTCACTAGGCGCACACATGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQRRRKDKTQAHSQG*SHVQKLLTRRTHGH Trigger: GTGGCCATGTGTGCGCCTAGTGAGAAGTTTCTGAACATGGGAGCACCCCTGGGAGTGGGCCTGGGTCTTGTCTTTGCGTCTTCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 90 bp | GCCACAACTGCACCCATCACACCAGAATGCAGCATCCAAGCCAGATaGTTTGGGCCTGGGCTCTGCTCATATGATATTGAGTGTACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATTAPITPECSIQAR*FGPGLCSYDIECTS Trigger: GCTTGTACACTCAATATCATATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGGATGCTGCATTCTGGTGTGATGGGTGCAGTTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | CACAATGCCCAGTCATGTCTGCATTCACTCCACAGGAGGATGTTGTCTCCATCTACAAGTGGAGAGGCCTaGGTGATGAAAGTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HNAQSCLHSLHRRMLSPSTSGEA*VMKVGW Trigger: CCAGCCCACTTTCATCACCAAGGCCTCTCCACTTGT...AGATGGAGACAACATCCTCCTGTGGAGTGAATGCAGACATGACTGGGCATTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | AGGTCAACTAAGTTTGCTTTGTTCATGCTTAAGCTGAGAGGGAACGGAGGAAGCTCCAAGCCAGATGCTTaGGGCCTGGGCTCTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSTKFALFMLKLRGNGGSSKPDA*GLGSAH Trigger: ATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGGA...GCTTCCTCCGTTCCCTCTCAGCTTAAGCATGAACAAAGCAAACTTAGTTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS CCA 90 bp | GGGTGTTACGAGCCATTGGTTCTTTGTGATGGAATTCTTCACAAGTaGAGAGGCCTTGGTGATGAAAGTGGGCTGGAAAACCCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCYEPLVLCDGILHK*RGLGDESGLENPGR Trigger: CCTTCCAGGGTTTTCCAGCCCACTTTCATCACCAAGGCCTCTCCACTTGTGAAGAATTCCATCACAAAGAACCAATGGCTCGTAACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS-3UTR CAA 90 bp | CACACATCTGACAGCAAAGGAGTCTTGAGCTTTGGAGTAGTACATCATACCGAGACAAGTGGAGAGGCCTaGGTGATGAAAGTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HTSDSKGVLSFGVVHHTETSGEA*VMKVGW Trigger: CCAGCCCACTTTCATCACCAAGGCCTCTCCACTTGT...CTCGGTATGATGTACTACTCCAAAGCTCAAGACTCCTTTGCTGTCAGATGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 90 bp | ACACCAGAATGCAGCATCCAAGCCAGATGCTTTGGGCCTGGGCTCTaGTCATATGATATTGAGTGTACAAGCATTCCAGCTCCAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: TPECSIQARCFGPGL*SYDIECTSIPAPIM Trigger: CATGATTGGAGCTGGAATGCTTGTACACTCAATATCATATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGGATGCTGCATTCTGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 90 bp | AGACATTCCCAAGCCATAGTAGCAGAGCGCTCCAAGACCAACAGCTaGTCCTCCAGCAACAAACCACCTTCCCATTTGATCGATTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RHSQAIVAERSKTNS*SSSNKPPSHLIDFK Trigger: TTTAAAATCGATCAAATGGGAAGGTGGTTTGTTGCTGGAGGAGCAGCTGTTGGTCTTGGAGCGCTCTGCTACTATGGCTTGGGAATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS-3UTR CAA 90 bp | GTCGCATTACTGCACATTTTAAACATGGTGACAGGCTATCTTCTAAACCTCAAGTCCAAGCCAGATGCTTaGGGCCTGGGCTCTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VALLHILNMVTGYLLNLKSKPDA*GLGSAH Trigger: ATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGGA...CTTGAGGTTTAGAAGATAGCCTGTCACCATGTTTAAAATGTGCAGTAATGCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | AAACTGGCTCAGTGGGTAAAAGGTGCTTGCTACTCTGAGCTCAACAATCTGAGCCTAATCCACCATACATaGCCACTGAGTACAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLAQWVKGACYSELNNLSLIHHT*PLSTEW Trigger: CCACTCTGTACTCAGTGGCAATGTATGGTGGATTAG...GCTCAGATTGTTGAGCTCAGAGTAGCAAGCACCTTTTACCCACTGAGCCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165649.4 |
||
| CDS CCA 90 bp | TCTGCTCATATGATATTGAGTGTACAAGCATTCCAGCTCCAATCATaGCTGCAAAGGTCGCACCAATTGTCACCCAAGAGCCTGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SAHMILSVQAFQLQS*LQRSHQLSPKSLSS Trigger: TGATGACAGGCTCTTGGGTGACAATTGGTGCGACCTTTGCAGCCATGATTGGAGCTGGAATGCTTGTACACTCAATATCATATGAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS-3UTR CAA 90 bp | CCACAATCAGTGTTGTCCTGGGCATTCAAACTGACTGCAGGTGCCTTTTATCTCGGGTGTTACGAGCCATaGGTTCTTTGTGATGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: PQSVLSWAFKLTAGAFYLGCYEP*VLCDGI Trigger: AATTCCATCACAAAGAACCAATGGCTCGTAACACCC...GAGATAAAAGGCACCTGCAGTCAGTTTGAATGCCCAGGACAACACTGATTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | TGTAATGACTATCTGCTCCTATTAAACAAGCAAGACATCAGTGAGCGGAGACATCTAATCCACCATACATaGCCACTGAGTACAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CNDYLLLLNKQDISERRHLIHHT*PLSTEW Trigger: CCACTCTGTACTCAGTGGCAATGTATGGTGGATTAG...ATGTCTCCGCTCACTGATGTCTTGCTTGTTTAATAGGAGCAGATAGTCATTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | CATGGTGACAGGCTATCTTCTAAACCTCAAGGAATTCTGCTGATGCAAACTGTAGATGGGATCATACTTTaGAGCTCCATACATGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HGDRLSSKPQGILLMQTVDGIIL*SSIHGC Trigger: ACACCCATGTATGGAGCTCAAAAGTATGATCCCATC...TACAGTTTGCATCAGCAGAATTCCTTGAGGTTTAGAAGATAGCCTGTCACCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | TGTAATGACTATCTGCTCCTATTAAACAAGCAAGACATCAGTGAGCGGAGACATGGGTGTTACGAGCCATaGGTTCTTTGTGATGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: CNDYLLLLNKQDISERRHGCYEP*VLCDGI Trigger: AATTCCATCACAAAGAACCAATGGCTCGTAACACCC...ATGTCTCCGCTCACTGATGTCTTGCTTGTTTAATAGGAGCAGATAGTCATTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | ACGGAGGAAGCCAACAGTTTTAGAAGAAAAACCAATCCTAATCTTAGCATAAGCGATGGGATCATACTTTaGAGCTCCATACATGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TEEANSFRRKTNPNLSISDGIIL*SSIHGC Trigger: ACACCCATGTATGGAGCTCAAAAGTATGATCCCATC...GCTTATGCTAAGATTAGGATTGGTTTTTCTTCTAAAACTGTTGGCTTCCTCCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS-3UTR CAA 90 bp | ACGGAGGAAGCCAACAGTTTTAGAAGAAAAACCAATCCTAATCTTAGCATAAGCTCTGCTCATATGATATaGAGTGTACAAGCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TEEANSFRRKTNPNLSISSAHMI*SVQAFQ Trigger: CTGGAATGCTTGTACACTCAATATCATATGAGCAGA...GCTTATGCTAAGATTAGGATTGGTTTTTCTTCTAAAACTGTTGGCTTCCTCCGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 90 bp | ATTGATGGGATCATACTTTTGAGCTCCATACATGGGTGTTATTTCTaGACGTTTGATTACTTTCTGAGTATCATACAGAAGGAACATGCT | + |
|
Preference number: 5 (lower is better) Translates to: IDGIILLSSIHGCYF*TFDYFLSIIQKEHA Trigger: AGCATGTTCCTTCTGTATGATACTCAGAAAGTAATCAAACGTGCAGAAATAACACCCATGTATGGAGCTCAAAAGTATGATCCCATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 72 bp | AGACGCAAAGACAAGACCCAGGCCCACTCCCAGGGGTaGTCCCATGTTCAGAAACTTCTCACTAGGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: RRKDKTQAHSQG*SHVQKLLTRRT Trigger: TGTGCGCCTAGTGAGAAGTTTCTGAACATGGGAGCACCCCTGGGAGTGGGCCTGGGTCTTGTCTTTGCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 72 bp | CAAGCCATAGTAGCAGAGCGCTCCAAGACCAACAGCTaGTCCTCCAGCAACAAACCACCTTCCCATTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: QAIVAERSKTNS*SSSNKPPSHLI Trigger: GATCAAATGGGAAGGTGGTTTGTTGCTGGAGGAGCAGCTGTTGGTCTTGGAGCGCTCTGCTACTATGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS GCA 72 bp | GCACCCATCACACCAGAATGCAGCATCCAAGCCAGATaGTTTGGGCCTGGGCTCTGCTCATATGATATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: APITPECSIQAR*FGPGLCSYDIE Trigger: CTCAATATCATATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGGATGCTGCATTCTGGTGTGATGGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS CAA 90 bp | GCATCCAAGCCAGATGCTTTGGGCCTGGGCTCTGCTCATATGATATaGAGTGTACAAGCATTCCAGCTCCAATCATGGCTGCAAAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ASKPDALGLGSAHMI*SVQAFQLQSWLQRS Trigger: CGACCTTTGCAGCCATGATTGGAGCTGGAATGCTTGTACACTCAATATCATATGAGCAGAGCCCAGGCCCAAAGCATCTGGCTTGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS CAA 90 bp | AGCCATTGGTTCTTTGTGATGGAATTCTTCACAAGTGGAGAGGCCTaGGTGATGAAAGTGGGCTGGAAAACCCTGGAAGGTAGTGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SHWFFVMEFFTSGEA*VMKVGWKTLEGSVR Trigger: CCGGACACTACCTTCCAGGGTTTTCCAGCCCACTTTCATCACCAAGGCCTCTCCACTTGTGAAGAATTCCATCACAAAGAACCAATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS CAA 72 bp | CCAGATGCTTTGGGCCTGGGCTCTGCTCATATGATATaGAGTGTACAAGCATTCCAGCTCCAATCATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PDALGLGSAHMI*SVQAFQLQSWL Trigger: CAGCCATGATTGGAGCTGGAATGCTTGTACACTCAATATCATATGAGCAGAGCCCAGGCCCAAAGCATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS CCA 72 bp | GAGCCATTGGTTCTTTGTGATGGAATTCTTCACAAGTaGAGAGGCCTTGGTGATGAAAGTGGGCTGGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: EPLVLCDGILHK*RGLGDESGLEN Trigger: GTTTTCCAGCCCACTTTCATCACCAAGGCCTCTCCACTTGTGAAGAATTCCATCACAAAGAACCAATGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS CCA 72 bp | ATGATATTGAGTGTACAAGCATTCCAGCTCCAATCATaGCTGCAAAGGTCGCACCAATTGTCACCCAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: MILSVQAFQLQS*LQRSHQLSPKS Trigger: GCTCTTGGGTGACAATTGGTGCGACCTTTGCAGCCATGATTGGAGCTGGAATGCTTGTACACTCAATATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 ENSMUST00000224769.2 |
||
| CDS CAA 72 bp | GTAGATTGTCAACATCGAATTGATGGGATCATACTTTaGAGCTCCATACATGGGTGTTATTTCTGCACGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VDCQHRIDGIIL*SSIHGCYFCTF Trigger: AAACGTGCAGAAATAACACCCATGTATGGAGCTCAAAAGTATGATCCCATCAATTCGATGTTGACAATCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS CAA 90 bp | TGTATCCATGTAGATTGTCAACATCGAATTGATGGGATCATACTTTaGAGCTCCATACATGGGTGTTATTTCTGCACGTTTGATTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: CIHVDCQHRIDGIIL*SSIHGCYFCTFDYF Trigger: AAAGTAATCAAACGTGCAGAAATAACACCCATGTATGGAGCTCAAAAGTATGATCCCATCAATTCGATGTTGACAATCTACATGGATACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS TCA 72 bp | TATTTAATGTATCCATGTAGATTGTCAACATCGAATTaGTGGGATCATACTTTTGAGCTCCATACATGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YLMYPCRLSTSN*WDHTFELHTWV Trigger: CACCCATGTATGGAGCTCAAAAGTATGATCCCATCAATTCGATGTTGACAATCTACATGGATACATTAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||
| CDS GCA 72 bp | ATCATACTTTTGAGCTCCATACATGGGTGTTATTTCTaGACGTTTGATTACTTTCTGAGTATCATACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IILLSSIHGCYF*TFDYFLSIIQK Trigger: CTTCTGTATGATACTCAGAAAGTAATCAAACGTGCAGAAATAACACCCATGTATGGAGCTCAAAAGTATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042564.17 ENSMUST00000165649.4 |
||