Pregenerated sensors for GHDC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017747Ensembl transcript IDs: ENSMUST00000017891.14, ENSMUST00000139341.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTaGCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAG | + |
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Preference number: 1 (lower is better) Translates to: SPPLSLRFLHLLQEH*LHFQPLLYLGQAHE Trigger: CTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR GCA 90 bp | AGGGCATCGGATCTCATTGCGGATGGTTGTGAGGCACCATATGGTTaGTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RASDLIADGCEAPYG*WDLNSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGTGCCTCACAACCATCCGCAATGAGATCCGATGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR TCA 90 bp | TGGGTTCAGCTGTGTGCTCCAAGCCGGCATCTTAAAACTTGCCAATaGGTCCAATTGGACCCAATCAGACCACTGTTATGTGACATCTGG | + |
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Preference number: 1 (lower is better) Translates to: WVQLCAPSRHLKTCQ*VQLDPIRPLLCDIW Trigger: CCAGATGTCACATAACAGTGGTCTGATTGGGTCCAATTGGACTCATTGGCAAGTTTTAAGATGCCGGCTTGGAGCACACAGCTGAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR-3UTR TCA 90 bp | GCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACAACGGGAGACCATCGATaGTGGGTTCAGCTGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: APGALPTLSALAVPWPSTTGDHR*WVQLCA Trigger: AGCACACAGCTGAACCCATCATCGATGGTCTCCCGT...TGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR CAA 90 bp | ATCTGCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTaGGCCAAGCACATGAGAAGGACCAGCAGTCTCACGAAGGATAGG | + |
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Preference number: 2 (lower is better) Translates to: ICSRSTAYTFSPCCT*AKHMRRTSSLTKDR Trigger: CCTATCCTTCGTGAGACTGCTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR CAA 90 bp | GATCTCATTGCGGATGGTTGTGAGGCACCATATGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: DLIADGCEAPYGCWD*NSGPLEEQSVLLPA Trigger: AGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGTGCCTCACAACCATCCGCAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR-3UTR TCA 90 bp | GCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTCTTAGTGCTCTTACCTGCTaGGCCATCTCACCACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ARHTLDHETMRLRFSFFLSALTC*AISPPL Trigger: CAGGGGTGGTGAGATGGCTCAGCAGGTAAGAGCACT...AAGAAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR-3UTR GCA 90 bp | TGTGCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTGAGGCACCATATGGTTaGTGGGATTTGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: CARHTLDHETMRLRFSFFEAPYG*WDLNSG Trigger: TCCTGAGTTCAAATCCCAGCAACCATATGGTGCCTC...AAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR CCA 72 bp | CTGGGCCACTGTGGGCCACAGCCTCAGCCCTTCAGGTaGTTGTGCAAGACACACCCTAGACCACGAAACAAT | + |
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Preference number: 3 (lower is better) Translates to: LGHCGPQPQPFR*LCKTHPRPRNN Trigger: ATTGTTTCGTGGTCTAGGGTGTGTCTTGCACAACCACCTGAAGGGCTGAGGCTGTGGCCCACAGTGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR GCA 72 bp | CACTGTGGGCCACAGCCTCAGCCCTTCAGGTGGTTGTaGAAGACACACCCTAGACCACGAAACAATGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: HCGPQPQPFRWL*KTHPRPRNNEA Trigger: AGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACAACCACCTGAAGGGCTGAGGCTGTGGCCCACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR TCA 72 bp | AGTCTCACGAAGGATAGGCTGACGGGAGACCATCGATaGTGGGTTCAGCTGTGTGCTCCAAGCCGGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: SLTKDRLTGDHR*WVQLCAPSRHL Trigger: AAGATGCCGGCTTGGAGCACACAGCTGAACCCATCATCGATGGTCTCCCGTCAGCCTATCCTTCGTGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR TCA 72 bp | AGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTaGGCCATCTCACCACCCCTGAGCCTGAGGTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: RTFGRAVSALTC*AISPPLSLRFL Trigger: AAGAAACCTCAGGCTCAGGGGTGGTGAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR GCA 72 bp | CTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTaGCTACACTTTCAGCCCTTGCTGTACCTTGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LSLRFLHLLQEH*LHFQPLLYLGQ Trigger: TTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGCATCGGATCTCATTGCGGATGGTTGTaGGGCACCATATGGTTGCTGGGATTTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEEGIGSHCGWL*GTIWLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCATATGGTGCCTCACAACCATCCGCAATGAGATCCGATGCCCTCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR TCA 72 bp | ATGAGTCCAATTGGACCCAATCAGACCACTGTTATGTaGCATCTGGTCCAGGACTCAACATCCAGAGATGTT | + |
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Preference number: 3 (lower is better) Translates to: MSPIGPNQTTVM*HLVQDSTSRDV Trigger: AACATCTCTGGATGTTGAGTCCTGGACCAGATGTCACATAACAGTGGTCTGATTGGGTCCAATTGGACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | TGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGTTGGCCCCTGGCCACTaGCCCACTGCTTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CLHFQPLLYLGQAHEKDQLAPGH*PTAWAR Trigger: CCTGGCCCAAGCAGTGGGGCAGTGGCCAGGGGCCAA...CTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | CTGCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCATCAGCCAGCATGGCCTaGCACCCCGAGACCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LLQEHCLHFQPLLYLGQASASMA*HPETSA Trigger: AGCAGAGGTCTCGGGGTGCCAGGCCATGCTGGCTGA...TGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | CCACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTCACCACATGAGGGCCTaGTGCTGGCTCTGGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: PPLSLRFLHLLQEHCLHFHHMRA*CWLWPT Trigger: TGTGGGCCAGAGCCAGCAGCAGGCCCTCATGTGGTG...AAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | GCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACAAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: APGALPTLSALAVPWPSTRVTTT*SFGQSR Trigger: CCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCT...TGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | CTGCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCAGCCTGCTGCTGGCTCTaGCCCACATTCAACGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLQEHCLHFQPLLYLGQAACCWL*PTFNVL Trigger: GAGCACGTTGAATGTGGGCCAGAGCCAGCAGCAGGC...TGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | CTGCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCAGGCACCTGGTCAGGCTaGTGTGGTTCGTCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: LLQEHCLHFQPLLYLGQAGTWSG*CGSSAP Trigger: TGGTGCTGACGAACCACACCAGCCTGACCAGGTGCC...TGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | CCACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTCATGGTCCAACAGCTTaGCCCCTGGCCACTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PPLSLRFLHLLQEHCLHFHGPTA*PLATAP Trigger: TGGGGCAGTGGCCAGGGGCCAAGCTGTTGGACCATG...AAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR TCA 90 bp | TGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGCTTCCCGGAGAACCCTaGAGCTCCCTGGCCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: CLHFQPLLYLGQAHEKDQLPGEP*SSLASP Trigger: TGGTGAGGCCAGGGAGCTTCAGGGTTCTCCGGGAAG...CTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | TGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGCCCCGAGACCTCTGCTaGCAGAGTATGGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CLHFQPLLYLGQAHEKDQPRDLC*QSMASR Trigger: CCTGCTGGCCATACTCTGGCAGCAGAGGTCTCGGGG...CTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | ACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTGAGCCATCTCACCCCCCGGGGATATCAATaGCTCCAGCAGCAGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: TQDLWKSSQCSYLLSHLTPRGYQ*LQQQGP Trigger: CGGACCCTGCTGCTGGAGGCATTGATATCCCCGGGG...GGTGAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGCAACAGCTTGGCCCCTaGCCACTGCCCCACTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: CLHFQPLLYLGQAHEKDQQQLGP*PLPHCL Trigger: CAAGCAGTGGGGCAGTGGCCAGGGGCCAAGCTGTTG...CTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | ACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTGAGCCATCTCACCCTCTTCTGCAGGAGCTaGGCCAGGTGCCTGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TQDLWKSSQCSYLLSHLTLFCRS*ARCLSL Trigger: CAGGCTCAGGCACCTGGCCCAGCTCCTGCAGAAGAG...GGTGAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR CAA 72 bp | GGCCACTGTGGGCCACAGCCTCAGCCCTTCAGGTGGTaGTGCAAGACACACCCTAGACCACGAAACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: GHCGPQPQPFRW*CKTHPRPRNNE Trigger: CTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACAACCACCTGAAGGGCTGAGGCTGTGGCCCACAGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | CTGCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCATCCCAGAATCCCAGCTaGTATGGCCTCAGCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLQEHCLHFQPLLYLGQASQNPS*YGLSQF Trigger: GAACTGGCTGAGGCCATAGCAGCTGGGATTCTGGGA...TGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | ACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTCAGGGGGAGGCAGGGGATaGGAGCGTCTCTTCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: TPEPEVSSSAPGALPTLSGGGRG*ERLFTF Trigger: GAAAGTGAAGAGACGCTCCCATCCCCTGCCTCCCCC...TGAAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR TCA 90 bp | ACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTCATCTTCAGACACCACATaGGGGCCTGCTGCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TPEPEVSSSAPGALPTLSSSDTT*GPAAGS Trigger: AGAGCCAGCAGCAGGCCCTCATGTGGTGTCTGAAGA...TGAAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | ACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTCACTCCACTGCAGTCCTTaGCTCAAGTACCCTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TPEPEVSSSAPGALPTLSLHCSP*LKYPQP Trigger: GGGCTGAGGGTACTTGAGGCAAGGACTGCAGTGGAG...TGAAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | ACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTGAGCCATCTCACCTATCTGTGTCCTCCCTaGGGAGACAGCAGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TQDLWKSSQCSYLLSHLTYLCPP*GDSRSP Trigger: AGGGCTCCTGCTGTCTCCCCAGGGAGGACACAGATA...GGTGAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGCAGTCTCACGAAGAAGGCTAGCCCTTaGCACCACAGGACCCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: FSPCCTLAKHMRRTSSLTKKASP*HHRTLR Trigger: CCTTAGGGTCCTGTGGTGCCAAGGGCTAGCCTTCTT...CGTGAGACTGCTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR CAA 72 bp | AGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTaGGCCAAGCACATGAGAAGGACCAGCAGTCTCACG | + |
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Preference number: 4 (lower is better) Translates to: RSTAYTFSPCCT*AKHMRRTSSLT Trigger: CGTGAGACTGCTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTTCTGCTGCCAGAGTATaGCCAGCAGGGGCACGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CWDLNSGPLEEQSVLLPASAARV*PAGARG Trigger: TCCTCGTGCCCCTGCTGGCCATACTCTGGCAGCAGA...AGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TACACTGTAGTTGTCTTCAGACACACCAGAAGAGGGCATCGGATCTCATTGCGGACTGATCAGCCAGCATaGCCTGGCACCCCGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: YTVVVFRHTRRGHRISLRTDQPA*PGTPRP Trigger: AGGTCTCGGGGTGCCAGGCCATGCTGGCTGATCAGT...CCGCAATGAGATCCGATGCCCTCTTCTGGTGTGTCTGAAGACAACTACAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | ACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTCAAGACAGCAGGAGCCCTaGGCTTTCTTCAGACACCAC | + |
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Preference number: 4 (lower is better) Translates to: TPEPEVSSSAPGALPTLSRQQEP*AFFRHH Trigger: GTGGTGTCTGAAGAAAGCCCAGGGCTCCTGCTGTCT...TGAAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGCAGTCTCACGGCTCCTGAGTGTGGCTaGTTTGGGTCAGTGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FSPCCTLAKHMRRTSSLTAPECG*FGSVED Trigger: ATCTTCCACTGACCCAAACCAGCCACACTCAGGAGC...CGTGAGACTGCTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTCACTGCCCCACTGCTTaGGCCAGGGCCACAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: CWDLNSGPLEEQSVLLPAHCPTA*ARATEN Trigger: ATTCTCTGTGGCCCTGGCCCAAGCAGTGGGGCAGTG...AGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | CCACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTAACCCTGAAGCTCCCTaGCCTCACCAGATGGACTTT | + |
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Preference number: 4 (lower is better) Translates to: PPLSLRFLHLLQEHCLHFNPEAP*PHQMDF Trigger: AAAGTCCATCTGGTGAGGCCAGGGAGCTTCAGGGTT...AAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | ATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTGCACCCCGAGACCTCTaGTGCCAGAGTATGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IWLLGFELRTFGRAVSALAPRDL*CQSMAS Trigger: GCTGGCCATACTCTGGCAGCAGAGGTCTCGGGGTGC...AAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | TACACTGTAGTTGTCTTCAGACACACCAGAAGAGGGCATCGGATCTCATTGCGGGATATCACCCTCTTCTaGAGGAGCTGGGCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: YTVVVFRHTRRGHRISLRDITLF*RSWARC Trigger: GCACCTGGCCCAGCTCCTGCAGAAGAGGGTGATATC...CCGCAATGAGATCCGATGCCCTCTTCTGGTGTGTCTGAAGACAACTACAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | GCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTCTTCACCACCTGCAGCTTTaGCCAGAGCCGGCGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ARHTLDHETMRLRFSFFLHHLQL*PEPAGQ Trigger: TTGGCCCGCCGGCTCTGGCCAAAGCTGCAGGTGGTG...AAGAAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR CAA 72 bp | GCGGATGGTTGTGAGGCACCATATGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ADGCEAPYGCWD*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGTGCCTCACAACCATCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR GCA 90 bp | TGTGCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTCCCAGCAGGGTGGCCTaGAAAGAGGCGTCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: CARHTLDHETMRLRFSFFPSRVA*KEASPW Trigger: CCATGGAGACGCCTCTTTGCAGGCCACCCTGCTGGG...AAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGGCTGGTTTGGGTCAGTaGAAGATGATTCCGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: CLHFQPLLYLGQAHEKDQAGLGQ*KMIPEG Trigger: ACCTTCCGGAATCATCTTCCACTGACCCAAACCAGC...CTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | CTGCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCAGGTTCCTTCCTTGATTaGAAGCAGCTCAATAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLQEHCLHFQPLLYLGQAGSFLD*KQLNKG Trigger: CCCTTTATTGAGCTGCTTCCAATCAAGGAAGGAACC...TGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGAAACACTTCGTAGTGTaGGGCAGAACCCTCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLHFQPLLYLGQAHEKDQKHFVV*GRTLTG Trigger: TCCTGTGAGGGTTCTGCCCCACACTACGAAGTGTTT...CTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR TCA 90 bp | TGTGCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTGGCCACCACTCCTCCTaGGGCAGCATAAGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CARHTLDHETMRLRFSFFGHHSS*GSISRR Trigger: TCTCCTGCTTATGCTGCCTCAGGAGGAGTGGTGGCC...AAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | ATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTTTAGACCCAGCAGGGTaGCCTGCAAAGAGGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IWLLGFELRTFGRAVSALLDPAG*PAKRRL Trigger: GAGACGCCTCTTTGCAGGCCACCCTGCTGGGTCTAA...AAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACATGAGAAGGACCAGTACTCCTTCTCCCTTTaGGCATCAGTAAGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLHFQPLLYLGQAHEKDQYSFSL*ASVRRR Trigger: TCTCCTCCTTACTGATGCCCAAAGGGAGAAGGAGTA...CTGGTCCTTCTCATGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | ATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTTCACCAGATGGACTTTaGCAGGACCCACACTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IWLLGFELRTFGRAVSALSPDGL*QDPHCP Trigger: GGGGCAGTGTGGGTCCTGCCAAAGTCCATCTGGTGA...AAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | ATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTCCTGGCCTCACCAGATaGACTTTGGCAGGACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IWLLGFELRTFGRAVSALPGLTR*TLAGPT Trigger: TGTGGGTCCTGCCAAAGTCCATCTGGTGAGGCCAGG...AAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| 3UTR CAA 72 bp | GCACCATATGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTACCTGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APYGCWDLNSGP*EEQSVLLPAEP Trigger: TGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGTGCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTATGAGGGCCTGCTGCTaGCTCTGGCCCACATTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CARHTLDHETMRLRFSFFMRACC*LWPTFN Trigger: GTTGAATGTGGGCCAGAGCCAGCAGCAGGCCCTCAT...AAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | TGTGCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTCTGGTCAGGCTGGTGTaGTTCGTCAGCACCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: CARHTLDHETMRLRFSFFLVRLV*FVSTNS Trigger: TGAGTTGGTGCTGACGAACCACACCAGCCTGACCAG...AAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR TCA 90 bp | TGTGCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTTCACTTTCTTGCTCCTaGGTGTGGCTGGTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CARHTLDHETMRLRFSFFSLSCS*VWLVWV Trigger: GACCCAAACCAGCCACACTCAGGAGCAAGAAAGTGA...AAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CCA 90 bp | GCAAGACACACCCTAGACCACGAAACAATGAGGCTGAGGTTTTCTTTCTTTCTTGAGGCTGCCTCCTCTTaGGTTCCTTCCTTGATTGGA | + |
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Preference number: 4 (lower is better) Translates to: ARHTLDHETMRLRFSFFLEAASS*VPSLIG Trigger: TCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTC...AAGAAAGAAAGAAAACCTCAGCCTCATTGTTTCGTGGTCTAGGGTGTGTCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | TGCTGGCTCTGGCCCACATTCAACGTGCTCCGGTCTAGTCTCCACTaGTGCCAGGCGGCTGCCCAGCCCAGCATCCCCCAGGCCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CWLWPTFNVLRSSLH*CQAAAQPSIPQATR Trigger: CCGAGTGGCCTGGGGGATGCTGGGCTGGGCAGCCGCCTGGCAGCAGTGGAGACTAGACCGGAGCACGTTGAATGTGGGCCAGAGCCAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 90 bp | ACCTGCAGCTTTGGCCAGAGCCGGCGGGCCAATCCTCGGGGTCCCTaGTCTAGGGCCTCCTTCAGCTCAGCGGCTCGTTTGGGGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: TCSFGQSRRANPRGP*SRASFSSAARLGRS Trigger: GCTTCTCCCCAAACGAGCCGCTGAGCTGAAGGAGGCCCTAGAGCAGGGACCCCGAGGATTGGCCCGCCGGCTCTGGCCAAAGCTGCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | GCCACAGCTTCTGCCTGTCCTCCTGAGTCCAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGGCGGGCCAATCCTCGGGGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ATASACPPESRVTTT*SFGQSRRANPRGPC Trigger: GCAGGGACCCCGAGGATTGGCCCGCCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCTGGACTCAGGAGGACAGGCAGAAGCTGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | CAGCATCCCCCAGGCCACTCGGTGTTGGAGACTGATCAGCCAGCATaGCCTGGCACCCCGAGACCTCTGCTGCCAGAGTATGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QHPPGHSVLETDQPA*PGTPRPLLPEYGQQ Trigger: CTGCTGGCCATACTCTGGCAGCAGAGGTCTCGGGGTGCCAGGCCATGCTGGCTGATCAGTCTCCAACACCGAGTGGCCTGGGGGATGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS CCA 90 bp | CTCGGGGTCCCTGCTCTAGGGCCTCCTTCAGCTCAGCGGCTCGTTTaGGGAGAAGCGTTCCCAGAATCCCAGCTGCTATGGCCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGVPALGPPSAQRLV*GEAFPESQLLWPQP Trigger: TGGCTGAGGCCATAGCAGCTGGGATTCTGGGAACGCTTCTCCCCAAACGAGCCGCTGAGCTGAAGGAGGCCCTAGAGCAGGGACCCCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | GGAGGAGAAGGCTGCCAGTGCTTCCCGGAGAACCCTGAAGCTCCCTaGCCTCACCAGATGGACTTTGGCAGGACCCACACTGCCCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGEGCQCFPENPEAP*PHQMDFGRTHTAPE Trigger: TTCCGGGGCAGTGTGGGTCCTGCCAAAGTCCATCTGGTGAGGCCAGGGAGCTTCAGGGTTCTCCGGGAAGCACTGGCAGCCTTCTCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | CAGCAGGAGCCCTGGGCTTTCTTCAGACACCACATGAGGGCCTGCTaGTGGCTCTGGCCCACATTCAACGTGCTCCGGTCTAGTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QQEPWAFFRHHMRAC*WLWPTFNVLRSSLH Trigger: GTGGAGACTAGACCGGAGCACGTTGAATGTGGGCCAGAGCCAGCAGCAGGCCCTCATGTGGTGTCTGAAGAAAGCCCAGGGCTCCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS CCA 90 bp | CCCTGGGCTTTCTTCAGACACCACATGAGGGCCTGCTGCTGGCTCTaGCCCACATTCAACGTGCTCCGGTCTAGTCTCCACTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PWAFFRHHMRACCWL*PTFNVLRSSLHCCQ Trigger: CTGGCAGCAGTGGAGACTAGACCGGAGCACGTTGAATGTGGGCCAGAGCCAGCAGCAGGCCCTCATGTGGTGTCTGAAGAAAGCCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 90 bp | CAGCTCAGCGGCTCGTTTGGGGAGAAGCGTTCCCAGAATCCCAGCTaGTATGGCCTCAGCCAGTTCTTCACCATCAGCCTCCAAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLSGSFGEKRSQNPS*YGLSQFFTISLQAH Trigger: GTGGGCTTGGAGGCTGATGGTGAAGAACTGGCTGAGGCCATAGCAGCTGGGATTCTGGGAACGCTTCTCCCCAAACGAGCCGCTGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | CTGCTCTCCACACAGACATGGTCCAACAGCTTGGCCCCTGGCCACTaGCCCACTGCTTGGGCCAGGGCCACAGAGAATACAGTCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSTQTWSNSLAPGH*PTAWARATENTVSS Trigger: TGATGAGACTGTATTCTCTGTGGCCCTGGCCCAAGCAGTGGGGCAGTGGCCAGGGGCCAAGCTGTTGGACCATGTCTGTGTGGAGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | AAGGTTCTCATATCTGTGTCCTCCCTGGGGAGACAGCAGGAGCCCTaGGCTTTCTTCAGACACCACATGAGGGCCTGCTGCTGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLISVSSLGRQQEP*AFFRHHMRACCWLW Trigger: CCAGAGCCAGCAGCAGGCCCTCATGTGGTGTCTGAAGAAAGCCCAGGGCTCCTGCTGTCTCCCCAGGGAGGACACAGATATGAGAACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 90 bp | ACACTTCGTAGTGTGGGGCAGAACCCTCACAGGAGTCCAGAACTCTaGTCTCCACACAGACATGGTCCAACAGCTTGGCCCCTGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TLRSVGQNPHRSPEL*SPHRHGPTAWPLAT Trigger: AGTGGCCAGGGGCCAAGCTGTTGGACCATGTCTGTGTGGAGAGCAGAGTTCTGGACTCCTGTGAGGGTTCTGCCCCACACTACGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | CAGCGGCTCGTTTGGGGAGAAGCGTTCCCAGAATCCCAGCTGCTATaGCCTCAGCCAGTTCTTCACCATCAGCCTCCAAGCCCACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRLVWGEAFPESQLL*PQPVLHHQPPSPQR Trigger: TCTTTGTGGGCTTGGAGGCTGATGGTGAAGAACTGGCTGAGGCCATAGCAGCTGGGATTCTGGGAACGCTTCTCCCCAAACGAGCCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | TTCACCATCAGCCTCCAAGCCCACAAAGACATCCAGGAGCTCCACTaGAGTCCTTGCCTCAAGTACCCTCAGCCCCGGGGATATCAATGC | + |
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Preference number: 5 (lower is better) Translates to: FTISLQAHKDIQELH*SPCLKYPQPRGYQC Trigger: GCATTGATATCCCCGGGGCTGAGGGTACTTGAGGCAAGGACTGCAGTGGAGCTCCTGGATGTCTTTGTGGGCTTGGAGGCTGATGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CAA 90 bp | ATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTCCACCACCTGCAGCTTaGGCCAGAGCCGGCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IWLLGFELRTFGRAVSALPPPAA*ARAGGP Trigger: TGGCCCGCCGGCTCTGGCCAAAGCTGCAGGTGGTGG...AAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CAA 90 bp | ACCCCTGAGCCTGAGGTTTCTTCATCTGCTCCAGGAGCACTGCCTACACTTTCACTCACCAGATGGACTTaGGCAGGACCCACACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TPEPEVSSSAPGALPTLSLTRWT*AGPTLP Trigger: GGGCAGTGTGGGTCCTGCCAAAGTCCATCTGGTGAG...TGAAAGTGTAGGCAGTGCTCCTGGAGCAGATGAAGAAACCTCAGGCTCAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | TTTGGCAGGACCCACACTGCCCCGGAATCGCAAGGACTTGTACTGTaGGGAGGCTTCCTGCAGGCAGTTGTCAAGCTTGTCTCGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: FGRTHTAPESQGLVL*GGFLQAVVKLVSIF Trigger: GAAAATCGAGACAAGCTTGACAACTGCCTGCAGGAAGCCTCCGCACAGTACAAGTCCTTGCGATTCCGGGGCAGTGTGGGTCCTGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | AGGCTGGTGTGGTTCGTCAGCACCAACTCATACTCCTTCTCCCTTTaGGCATCAGTAAGGAGGAGAGTGGAGGCTGCCTCCTCTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLVWFVSTNSYSFSL*ASVRRRVEAASSWV Trigger: AACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTTACTGATGCCCAAAGGGAGAAGGAGTATGAGTTGGTGCTGACGAACCACACCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CAA 90 bp | CTGCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACGTCTCTTCACTTTCTaGCTCCTGAGTGTGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLQEHCLHFQPLLYLGQARLFTF*LLSVAG Trigger: ACCAGCCACACTCAGGAGCAAGAAAGTGAAGAGACG...TGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | ACACTGCCCCGGAATCGCAAGGACTTGTACTGTGCGGAGGCTTCCTaGAGGCAGTTGTCAAGCTTGTCTCGATTTTCCTCCGACAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: TLPRNRKDLYCAEAS*RQLSSLSRFSSDRF Trigger: GAATCTGTCGGAGGAAAATCGAGACAAGCTTGACAACTGCCTGCAGGAAGCCTCCGCACAGTACAAGTCCTTGCGATTCCGGGGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | AAGGAGGAGAGTGGAGGCTGCCTCCTCTTGGGTTCCTTCCTTGATTaGAAGCAGCTCAATAAAGGGGACTCCAGGGGGCAGAAGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KEESGGCLLLGSFLD*KQLNKGDSRGQKIG Trigger: TCCTATCTTCTGCCCCCTGGAGTCCCCTTTATTGAGCTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | CGACAGATTCCTCAACCCCCTCAGCTCTACAAACACTTCGTAGTGTaGGGCAGAACCCTCACAGGAGTCCAGAACTCTGCTCTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: RQIPQPPQLYKHFVV*GRTLTGVQNSALHT Trigger: TGTGTGGAGAGCAGAGTTCTGGACTCCTGTGAGGGTTCTGCCCCACACTACGAAGTGTTTGTAGAGCTGAGGGGGTTGAGGAATCTGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CAA 90 bp | GCTCCAGGAGCACTGCCTACACTTTCAGCCCTTGCTGTACCTTGGCCAAGCACAATACTCCTTCTCCCTTaGGGCATCAGTAAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: APGALPTLSALAVPWPSTILLLP*GISKEE Trigger: CTCCTCCTTACTGATGCCCAAAGGGAGAAGGAGTAT...TGTGCTTGGCCAAGGTACAGCAAGGGCTGAAAGTGTAGGCAGTGCTCCTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 90 bp | TCCCTTTGGGCATCAGTAAGGAGGAGAGTGGAGGCTGCCTCCTCTTaGGTTCCTTCCTTGATTGGAAGCAGCTCAATAAAGGGGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLWASVRRRVEAASS*VPSLIGSSSIKGTP Trigger: TGGAGTCCCCTTTATTGAGCTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTTACTGATGCCCAAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS-3UTR CAA 90 bp | ACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTGAGCCATCTCACCCTGAGTGTGGCTGGTTaGGGTCAGTGGAAGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: TQDLWKSSQCSYLLSHLTLSVAG*GQWKMI Trigger: AATCATCTTCCACTGACCCAAACCAGCCACACTCAG...GGTGAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 90 bp | ATACTCCTTCTCCCTTTGGGCATCAGTAAGGAGGAGAGTGGAGGCTaGCTCCTCTTGGGTTCCTTCCTTGATTGGAAGCAGCTCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPLGISKEESGG*LLLGSFLDWKQLNK Trigger: TTTATTGAGCTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTTACTGATGCCCAAAGGGAGAAGGAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 90 bp | CTGCCAGGCGGCTGCCCAGCCCAGCATCCCCCAGGCCACTCGGTGTaGGAGACTGATCAGCCAGCATGGCCTGGCACCCCGAGACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPGGCPAQHPPGHSV*ETDQPAWPGTPRPL Trigger: CAGAGGTCTCGGGGTGCCAGGCCATGCTGGCTGATCAGTCTCCAACACCGAGTGGCCTGGGGGATGCTGGGCTGGGCAGCCGCCTGGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 72 bp | TCCTTGGCTCCATCGGGGCTTACCCGGCCCAGGGCGTaGCCAAGCCAGGGGACAGAGCAGGGCCATGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLAPSGLTRPRA*PSQGTEQGHGD Trigger: ATCGCCATGGCCCTGCTCTGTCCCCTGGCTTGGGCACGCCCTGGGCCGGGTAAGCCCCGATGGAGCCAAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 72 bp | CCCACATTCAACGTGCTCCGGTCTAGTCTCCACTGCTaGCAGGCGGCTGCCCAGCCCAGCATCCCCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTFNVLRSSLHC*QAAAQPSIPQA Trigger: GGCCTGGGGGATGCTGGGCTGGGCAGCCGCCTGGCAGCAGTGGAGACTAGACCGGAGCACGTTGAATGTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS CCA 72 bp | ATATCAATGCCTCCAGCAGCAGGGTCCGGGGGTCCTTaGCTCCATCGGGGCTTACCCGGCCCAGGGCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ISMPPAAGSGGP*LHRGLPGPGRA Trigger: GGCACGCCCTGGGCCGGGTAAGCCCCGATGGAGCCAAGGACCCCCGGACCCTGCTGCTGGAGGCATTGATAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 72 bp | GATATCAATGCCTCCAGCAGCAGGGTCCGGGGGTCCTaGGCTCCATCGGGGCTTACCCGGCCCAGGGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DINASSSRVRGS*APSGLTRPRAC Trigger: GCACGCCCTGGGCCGGGTAAGCCCCGATGGAGCCAAGGACCCCCGGACCCTGCTGCTGGAGGCATTGATATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 72 bp | ATCAGCCAGCATGGCCTGGCACCCCGAGACCTCTGCTaGCAGAGTATGGCCAGCAGGGGCACGAGGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISQHGLAPRDLC*QSMASRGTRRS Trigger: GCTCCTCCTCGTGCCCCTGCTGGCCATACTCTGGCAGCAGAGGTCTCGGGGTGCCAGGCCATGCTGGCTGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 72 bp | CTGATCAGCCAGCATGGCCTGGCACCCCGAGACCTCTaGTGCCAGAGTATGGCCAGCAGGGGCACGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LISQHGLAPRDL*CQSMASRGTRR Trigger: CCTCCTCGTGCCCCTGCTGGCCATACTCTGGCAGCAGAGGTCTCGGGGTGCCAGGCCATGCTGGCTGATCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 72 bp | TGGCCCACATTCAACGTGCTCCGGTCTAGTCTCCACTaGTGCCAGGCGGCTGCCCAGCCCAGCATCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPTFNVLRSSLH*CQAAAQPSIPQ Trigger: CTGGGGGATGCTGGGCTGGGCAGCCGCCTGGCAGCAGTGGAGACTAGACCGGAGCACGTTGAATGTGGGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 72 bp | TTTGGCCAGAGCCGGCGGGCCAATCCTCGGGGTCCCTaGTCTAGGGCCTCCTTCAGCTCAGCGGCTCGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FGQSRRANPRGP*SRASFSSAARL Trigger: CAAACGAGCCGCTGAGCTGAAGGAGGCCCTAGAGCAGGGACCCCGAGGATTGGCCCGCCGGCTCTGGCCAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 72 bp | TCTGCCTGTCCTCCTGAGTCCAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGGCGGGCCAATCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SACPPESRVTTT*SFGQSRRANPR Trigger: CCGAGGATTGGCCCGCCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCTGGACTCAGGAGGACAGGCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | CAGGGCGTGCCCAAGCCAGGGGACAGAGCAGGGCCATaGCGATGTAGGGGTCACACAGGCAGTACTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QGVPKPGDRAGP*RCRGHTGSTSW Trigger: CCAGGAAGTACTGCCTGTGTGACCCCTACATCGCCATGGCCCTGCTCTGTCCCCTGGCTTGGGCACGCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | GCTCTCCACACAGACATGGTCCAACAGCTTGGCCCCTaGCCACTGCCCCACTGCTTGGGCCAGGGCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: ALHTDMVQQLGP*PLPHCLGQGHR Trigger: TCTGTGGCCCTGGCCCAAGCAGTGGGGCAGTGGCCAGGGGCCAAGCTGTTGGACCATGTCTGTGTGGAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | TCCCGGAGAACCCTGAAGCTCCCTGGCCTCACCAGATaGACTTTGGCAGGACCCACACTGCCCCGGAATCGC | + |
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Preference number: 6 (lower is better) Translates to: SRRTLKLPGLTR*TLAGPTLPRNR Trigger: GCGATTCCGGGGCAGTGTGGGTCCTGCCAAAGTCCATCTGGTGAGGCCAGGGAGCTTCAGGGTTCTCCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | CCAGGCCACTCGGTGTTGGAGACTGATCAGCCAGCATaGCCTGGCACCCCGAGACCTCTGCTGCCAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: PGHSVLETDQPA*PGTPRPLLPEY Trigger: ATACTCTGGCAGCAGAGGTCTCGGGGTGCCAGGCCATGCTGGCTGATCAGTCTCCAACACCGAGTGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS CCA 72 bp | AGCAGGGTGGCCTGCAAAGAGGCGTCTCCATGGTACTaGGGGGAGGCAGGGGATGGGAGCGTCTCTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SRVACKEASPWY*GEAGDGSVSSL Trigger: AAGTGAAGAGACGCTCCCATCCCCTGCCTCCCCCCAGTACCATGGAGACGCCTCTTTGCAGGCCACCCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | GGCTGCCAGTGCTTCCCGGAGAACCCTGAAGCTCCCTaGCCTCACCAGATGGACTTTGGCAGGACCCACACT | + |
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Preference number: 6 (lower is better) Translates to: GCQCFPENPEAP*PHQMDFGRTHT Trigger: AGTGTGGGTCCTGCCAAAGTCCATCTGGTGAGGCCAGGGAGCTTCAGGGTTCTCCGGGAAGCACTGGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS TCA 72 bp | AGGAGGAGAAGGCTGCCAGTGCTTCCCGGAGAACCCTaGAGCTCCCTGGCCTCACCAGATGGACTTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RRRRLPVLPGEP*SSLASPDGLWQ Trigger: CTGCCAAAGTCCATCTGGTGAGGCCAGGGAGCTTCAGGGTTCTCCGGGAAGCACTGGCAGCCTTCTCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 72 bp | CCCTGGGCTTTCTTCAGACACCACATGAGGGCCTGCTaGTGGCTCTGGCCCACATTCAACGTGCTCCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PWAFFRHHMRAC*WLWPTFNVLRS Trigger: AGACCGGAGCACGTTGAATGTGGGCCAGAGCCAGCAGCAGGCCCTCATGTGGTGTCTGAAGAAAGCCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS GCA 72 bp | ACACAGACATGGTCCAACAGCTTGGCCCCTGGCCACTaGCCCACTGCTTGGGCCAGGGCCACAGAGAATACA | + |
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Preference number: 6 (lower is better) Translates to: TQTWSNSLAPGH*PTAWARATENT Trigger: TGTATTCTCTGTGGCCCTGGCCCAAGCAGTGGGGCAGTGGCCAGGGGCCAAGCTGTTGGACCATGTCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | CCTGCTCTAGGGCCTCCTTCAGCTCAGCGGCTCGTTTaGGGAGAAGCGTTCCCAGAATCCCAGCTGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: PALGPPSAQRLV*GEAFPESQLLW Trigger: CCATAGCAGCTGGGATTCTGGGAACGCTTCTCCCCAAACGAGCCGCTGAGCTGAAGGAGGCCCTAGAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | CCTGGACCACGTCACCCAGGCGGCACCTGGTCAGGCTaGTGTGGTTCGTCAGCACCAACTCATACTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGPRHPGGTWSG*CGSSAPTHTPS Trigger: AGAAGGAGTATGAGTTGGTGCTGACGAACCACACCAGCCTGACCAGGTGCCGCCTGGGTGACGTGGTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 72 bp | AGAACCCTGAAGCTCCCTGGCCTCACCAGATGGACTTaGGCAGGACCCACACTGCCCCGGAATCGCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: RTLKLPGLTRWT*AGPTLPRNRKD Trigger: GTCCTTGCGATTCCGGGGCAGTGTGGGTCCTGCCAAAGTCCATCTGGTGAGGCCAGGGAGCTTCAGGGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | ACCACGTCACCCAGGCGGCACCTGGTCAGGCTGGTGTaGTTCGTCAGCACCAACTCATACTCCTTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TTSPRRHLVRLV*FVSTNSYSFSL Trigger: AAGGGAGAAGGAGTATGAGTTGGTGCTGACGAACCACACCAGCCTGACCAGGTGCCGCCTGGGTGACGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 72 bp | GGGGGAGGCAGGGGATGGGAGCGTCTCTTCACTTTCTaGCTCCTGAGTGTGGCTGGTTTGGGTCAGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GGGRGWERLFTF*LLSVAGLGQWK Trigger: CTTCCACTGACCCAAACCAGCCACACTCAGGAGCAAGAAAGTGAAGAGACGCTCCCATCCCCTGCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 72 bp | TTGGCAGGACCCACACTGCCCCGGAATCGCAAGGACTaGTACTGTGCGGAGGCTTCCTGCAGGCAGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LAGPTLPRNRKD*YCAEASCRQLS Trigger: TGACAACTGCCTGCAGGAAGCCTCCGCACAGTACAAGTCCTTGCGATTCCGGGGCAGTGTGGGTCCTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 72 bp | GGCTCGTTTGGGGAGAAGCGTTCCCAGAATCCCAGCTaGTATGGCCTCAGCCAGTTCTTCACCATCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GSFGEKRSQNPS*YGLSQFFTISL Trigger: GAGGCTGATGGTGAAGAACTGGCTGAGGCCATAGCAGCTGGGATTCTGGGAACGCTTCTCCCCAAACGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | TTCTTCAGACACCACATGAGGGCCTGCTGCTGGCTCTaGCCCACATTCAACGTGCTCCGGTCTAGTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: FFRHHMRACCWL*PTFNVLRSSLH Trigger: GTGGAGACTAGACCGGAGCACGTTGAATGTGGGCCAGAGCCAGCAGCAGGCCCTCATGTGGTGTCTGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS CCA 72 bp | TGGGCTTTCTTCAGACACCACATGAGGGCCTGCTGCTaGCTCTGGCCCACATTCAACGTGCTCCGGTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: WAFFRHHMRACC*LWPTFNVLRSS Trigger: ACTAGACCGGAGCACGTTGAATGTGGGCCAGAGCCAGCAGCAGGCCCTCATGTGGTGTCTGAAGAAAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS CAA 90 bp | AGATGGACTTTGGCAGGACCCACACTGCCCCGGAATCGCAAGGACTaGTACTGTGCGGAGGCTTCCTGCAGGCAGTTGTCAAGCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RWTLAGPTLPRNRKD*YCAEASCRQLSSLS Trigger: AGACAAGCTTGACAACTGCCTGCAGGAAGCCTCCGCACAGTACAAGTCCTTGCGATTCCGGGGCAGTGTGGGTCCTGCCAAAGTCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | GTTTGGGGAGAAGCGTTCCCAGAATCCCAGCTGCTATaGCCTCAGCCAGTTCTTCACCATCAGCCTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VWGEAFPESQLL*PQPVLHHQPPS Trigger: GCTTGGAGGCTGATGGTGAAGAACTGGCTGAGGCCATAGCAGCTGGGATTCTGGGAACGCTTCTCCCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | AGTGGAGGCTGCCTCCTCTTGGGTTCCTTCCTTGATTaGAAGCAGCTCAATAAAGGGGACTCCAGGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SGGCLLLGSFLD*KQLNKGDSRGQ Trigger: CTGCCCCCTGGAGTCCCCTTTATTGAGCTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS GCA 72 bp | CTCCCTTTGGGCATCAGTAAGGAGGAGAGTGGAGGCTaGCTCCTCTTGGGTTCCTTCCTTGATTGGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPLGISKEESGG*LLLGSFLDWKQ Trigger: CTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTTACTGATGCCCAAAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | GATGATTCCGGAAGGTTCTCATATCTGTGTCCTCCCTaGGGAGACAGCAGGAGCCCTGGGCTTTCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: DDSGRFSYLCPP*GDSRSPGLSSD Trigger: GTCTGAAGAAAGCCCAGGGCTCCTGCTGTCTCCCCAGGGAGGACACAGATATGAGAACCTTCCGGAATCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017891.14 ENSMUST00000139341.2 |
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| CDS CCA 72 bp | TGGTTCGTCAGCACCAACTCATACTCCTTCTCCCTTTaGGCATCAGTAAGGAGGAGAGTGGAGGCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: WFVSTNSYSFSL*ASVRRRVEAAS Trigger: GGAGGCAGCCTCCACTCTCCTCCTTACTGATGCCCAAAGGGAGAAGGAGTATGAGTTGGTGCTGACGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | CCTCAACCCCCTCAGCTCTACAAACACTTCGTAGTGTaGGGCAGAACCCTCACAGGAGTCCAGAACTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PQPPQLYKHFVV*GRTLTGVQNSA Trigger: AGCAGAGTTCTGGACTCCTGTGAGGGTTCTGCCCCACACTACGAAGTGTTTGTAGAGCTGAGGGGGTTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 90 bp | CTCCCTTTGGGCATCAGTAAGGAGGAGAGTGGAGGCTGCCTCCTCTaGGGTTCCTTCCTTGATTGGAAGCAGCTCAATAAAGGGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: LPLGISKEESGGCLL*GSFLDWKQLNKGDS Trigger: GGAGTCCCCTTTATTGAGCTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTTACTGATGCCCAAAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 72 bp | AGTCTCATCAGTAACTTCTCCTCGAACATTCAGGGTTaGCCCCAGCCTGCAGGTGAACCTGACCACAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SLISNFSSNIQG*PQPAGEPDHRT Trigger: TGTCCTGTGGTCAGGTTCACCTGCAGGCTGGGGCAAACCCTGAATGTTCGAGGAGAAGTTACTGATGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CCA 72 bp | GCATCAGTAAGGAGGAGAGTGGAGGCTGCCTCCTCTTaGGTTCCTTCCTTGATTGGAAGCAGCTCAATAAAG | + |
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Preference number: 6 (lower is better) Translates to: ASVRRRVEAASS*VPSLIGSSSIK Trigger: CTTTATTGAGCTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTTACTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 72 bp | GGCATCAGTAAGGAGGAGAGTGGAGGCTGCCTCCTCTaGGGTTCCTTCCTTGATTGGAAGCAGCTCAATAAA | + |
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Preference number: 6 (lower is better) Translates to: GISKEESGGCLL*GSFLDWKQLNK Trigger: TTTATTGAGCTGCTTCCAATCAAGGAAGGAACCCAAGAGGAGGCAGCCTCCACTCTCCTCCTTACTGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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| CDS CAA 90 bp | AGAGAATACAGTCTCATCAGTAACTTCTCCTCGAACATTCAGGGTTaGCCCCAGCCTGCAGGTGAACCTGACCACAGGACACTGATTGTA | + |
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Preference number: 6 (lower is better) Translates to: REYSLISNFSSNIQG*PQPAGEPDHRTLIV Trigger: TACAATCAGTGTCCTGTGGTCAGGTTCACCTGCAGGCTGGGGCAAACCCTGAATGTTCGAGGAGAAGTTACTGATGAGACTGTATTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017891.14 |
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