Pregenerated sensors for GGT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040471Ensembl transcript IDs: ENSMUST00000076443.10, ENSMUST00000100903.3, ENSMUST00000108499.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCGGCCGAAGTGGGCATGAAGCAAATGCAGAGCAGGCAGACCCGTaGGCAGCCCCAGGCCGGGGGCCAGGAGTTGGGTTGGGCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GGRSGHEANAEQADP*AAPGRGPGVGLGLL Trigger: CAGCAGGCCCAACCCAACTCCTGGCCCCCGGCCTGGGGCTGCCCACGGGTCTGCCTGCTCTGCATTTGCTTCATGCCCACTTCGGCCGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR TCA 90 bp | AGGAAGGCACGGGCTGAGCAGAAGGTAACTCTAACCCCAGGTCTCTaGCCAGCGGGTTCAGCAAGGCCTTCCCAGCGAGATCTGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: RKARAEQKVTLTPGL*PAGSARPSQRDLGW Trigger: CCAGCCCAGATCTCGCTGGGAAGGCCTTGCTGAACCCGCTGGTCAGAGACCTGGGGTTAGAGTTACCTTCTGCTCAGCCCGTGCCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR TCA 90 bp | CGAGGCAGAAGAAGCTGCAGCGCAGGCTCTAAGGAAGGCACGGGCTaGGCAGAAGGTAACTCTAACCCCAGGTCTCTGACCAGCGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: RGRRSCSAGSKEGTG*AEGNSNPRSLTSGF Trigger: GAACCCGCTGGTCAGAGACCTGGGGTTAGAGTTACCTTCTGCTCAGCCCGTGCCTTCCTTAGAGCCTGCGCTGCAGCTTCTTCTGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR TCA 90 bp | GTTTGCAGGAATGGTGGGCAGGGAGCAGAGCTGGGTGTCCTGGAGTaGAGAGTAGACTCCAGCAGTTCCACAAGTTCTGGACCTGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: VCRNGGQGAELGVLE*RVDSSSSTSSGPAE Trigger: CTCAGCAGGTCCAGAACTTGTGGAACTGCTGGAGTCTACTCTTCACTCCAGGACACCCAGCTCTGCTCCCTGCCCACCATTCCTGCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR CCA 90 bp | TCTTCTGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTaGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSGLYLIEKSEIPSV*VPGNVVGPALDARA Trigger: GGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| 3UTR-3UTR CCA 90 bp | CCGTTGCTGTCCACGGTGGCCAGGGCACTGCTCACTGGGGTTTCAGCAGTTTGCCTTGGTCAGCAGGTGTaGCCAGGGCAGGCGGCCGAA | + |
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Preference number: 2 (lower is better) Translates to: PLLSTVARALLTGVSAVCLGQQV*PGQAAE Trigger: TTCGGCCGCCTGCCCTGGCCACACCTGCTGACCAAG...GCAAACTGCTGAAACCCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTGCTGTCCACGGTGGCCAGGGCACTGCTCACTGGGGTTTCAGCAGTTTGCATACAGCTGCCAGGTTaGGGTTGGTGGCCCGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PLLSTVARALLTGVSAVCIQLPG*GWWPEP Trigger: GGGCTCGGGCCACCAACCCCAACCTGGCAGCTGTAT...GCAAACTGCTGAAACCCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCATCTACCTCAAAGCCCTTTTCAGCCAGCATGGCAGGCTTGGTCAGCAGGTCCGGGGGCCAGGAGTTaGGTTGGGCCTGCTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VHLPQSPFQPAWQAWSAGPGARS*VGPAVR Trigger: CCTGACAGCAGGCCCAACCCAACTCCTGGCCCCCGG...ACCTGCTGACCAAGCCTGCCATGCTGGCTGAAAAGGGCTTTGAGGTAGATGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTGCTGTCCACGGTGGCCAGGGCACTGCTCACTGGGGTTTCAGCAGTTTGCCCTTTGTGCCCTGGATaGCTAGTGCGTTTGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PLLSTVARALLTGVSAVCPLCPG*LVRLPG Trigger: CCCTGGCAAACGCACTAGCCATCCAGGGCACAAAGG...GCAAACTGCTGAAACCCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTAGACTCCAGCAGTTCCACAAGTTCTGGACCTGCTGAGGGGCCAGGAGTCCTTCCCAGCGAGATCTaGGCTGGAGGCCAGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RVDSSSSTSSGPAEGPGVLPSEI*AGGQGC Trigger: GCAGCCCTGGCCTCCAGCCCAGATCTCGCTGGGAAG...GACTCCTGGCCCCTCAGCAGGTCCAGAACTTGTGGAACTGCTGGAGTCTACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTAGACTCCAGCAGTTCCACAAGTTCTGGACCTGCTGAGGGGCCAGGAGTCGGCCAGGAGTTGGGTTaGGCCTGCTGTCAGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RVDSSSSTSSGPAEGPGVGQELG*ACCQGS Trigger: ACTGCCCTGACAGCAGGCCCAACCCAACTCCTGGCC...GACTCCTGGCCCCTCAGCAGGTCCAGAACTTGTGGAACTGCTGGAGTCTACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTGCTGTCCACGGTGGCCAGGGCACTGCTCACTGGGGTTTCAGCAGTTTGCCCTTTTCAGCCAGCATaGCAGGCTTGGTCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PLLSTVARALLTGVSAVCPFQPA*QAWSAG Trigger: ACCTGCTGACCAAGCCTGCCATGCTGGCTGAAAAGG...GCAAACTGCTGAAACCCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTAGACTCCAGCAGTTCCACAAGTTCTGGACCTGCTGAGGGGCCAGGAGTCAGCCCCAAGGCCCAGTaGGGTTCCATTGGTATGGCA | + |
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Preference number: 2 (lower is better) Translates to: RVDSSSSTSSGPAEGPGVSPKAQ*GSIGMA Trigger: TGCCATACCAATGGAACCCCACTGGGCCTTGGGGCT...GACTCCTGGCCCCTCAGCAGGTCCAGAACTTGTGGAACTGCTGGAGTCTACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCATGGACCAGCCCTGGATaGCAGAGCCAGAGCCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SSGLYLIEKSEIPSVWVPWTSPG*QSQSQV Trigger: TACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCA...TGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| 3UTR CAA 90 bp | ATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATaGCTGCTAGACCTTCTCTGTCTGGCTCTCAAGTTCCAGACACCT | + |
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Preference number: 2 (lower is better) Translates to: MEQQTPHRYILFIHS*LLDLLCLALKFQTP Trigger: AGGTGTCTGGAACTTGAGAGCCAGACAGAGAAGGTCTAGCAGCAATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAGGTAACAGATTAGGATaGAGGCTTCATGTGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SGLYLIEKSEIPSVWVPGGNRLG*RLHVME Trigger: CTCCATCACATGAAGCCTCCATCCTAATCTGTTACC...TCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| 3UTR CCA 72 bp | AGACCCGTGGGCAGCCCCAGGCCGGGGGCCAGGAGTTaGGTTGGGCCTGCTGTCAGGGCAGTTGAGTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RPVGSPRPGARS*VGPAVRAVEFP Trigger: AGGAAACTCAACTGCCCTGACAGCAGGCCCAACCCAACTCCTGGCCCCCGGCCTGGGGCTGCCCACGGGTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CAA 90 bp | CCGTTGCTGTCCACGGTGGCCAGGGCACTGCTCACTGGGGTTTCAGCAGTTTGCGCCAGCATGGCAGGCTaGGTCAGCAGGTGTGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PLLSTVARALLTGVSAVCASMAG*VSRCGQ Trigger: CTGGCCACACCTGCTGACCAAGCCTGCCATGCTGGC...GCAAACTGCTGAAACCCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTAGACTCCAGCAGTTCCACAAGTTCTGGACCTGCTGAGGGGCCAGGAGTCGGGCCAGGAGTTGGGTaGGGCCTGCTGTCAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RVDSSSSTSSGPAEGPGVGPGVG*GLLSGQ Trigger: CTGCCCTGACAGCAGGCCCAACCCAACTCCTGGCCC...GACTCCTGGCCCCTCAGCAGGTCCAGAACTTGTGGAACTGCTGGAGTCTACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCAGGGGTGCATCTACCTCAAAGCCCTTTTCAGCCAGCATGGCAGGCTTGGCCGGGGGCCAGGAGTaGGGTTGGGCCTGCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: FARGASTSKPFSASMAGLAGGQE*GWACCQ Trigger: CTGACAGCAGGCCCAACCCAACTCCTGGCCCCCGGC...CAAGCCTGCCATGCTGGCTGAAAAGGGCTTTGAGGTAGATGCACCCCTGGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR CCA 72 bp | CAGGTTGGGGTTGGTGGCCCGAGCCCCAAGGCCCAGTaGGGTTCCATTGGTATGGCAGAACAATGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: QVGVGGPSPKAQ*GSIGMAEQWTE Trigger: CTCTGTCCATTGTTCTGCCATACCAATGGAACCCCACTGGGCCTTGGGGCTCGGGCCACCAACCCCAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR CCA 72 bp | GGCAGAACAATGGACAGAGCCCCTTTGTGCCCTGGATaGCTAGTGCGTTTGCCAGGGGTGCATCTACCTCAA | + |
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Preference number: 3 (lower is better) Translates to: GRTMDRAPLCPG*LVRLPGVHLPQ Trigger: TTGAGGTAGATGCACCCCTGGCAAACGCACTAGCCATCCAGGGCACAAAGGGGCTCTGTCCATTGTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| 3UTR CCA 72 bp | AGAAATTCCATCAGTGTGGGTACCAGGAAATGTGGTTaGACCAGCCCTGGATGCCAGAGCCAGAGCCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RNSISVGTRKCG*TSPGCQSQSQV Trigger: TACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACTGATGGAATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| 3UTR CCA 72 bp | AGTCAGAAATTCCATCAGTGTGGGTACCAGGAAATGTaGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SQKFHQCGYQEM*LDQPWMPEPEP Trigger: TGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACTGATGGAATTTCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| 3UTR CCA 72 bp | TGGATGCCAGAGCCAGAGCCAGGTAACAGATTAGGATaGAGGCTTCATGTGATGGAGCAGCAAACACCTCAC | + |
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Preference number: 3 (lower is better) Translates to: WMPEPEPGNRLG*RLHVMEQQTPH Trigger: GTGAGGTGTTTGCTGCTCCATCACATGAAGCCTCCATCCTAATCTGTTACCTGGCTCTGGCTCTGGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| 3UTR CCA 72 bp | CTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTaGGTACCAGGAAATGTGGTTGGACCAGCCCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LYLIEKSEIPSV*VPGNVVGPALD Trigger: ATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | TGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCCAGGGGGCTGTCCCTACTGTaGAGCTGCCTCAGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: WVPGNVVGPALDARARARGLSLL*SCLRAR Trigger: TCTGGCTCTGAGGCAGCTGCACAGTAGGGACAGCCC...CCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | TGTGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCCAAGGCCAGGGCTGCGCTaGGTAATACAGCTGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CGYQEMWLDQPWMPEPEPRPGLR*VIQLPG Trigger: ACCTGGCAGCTGTATTACGCAGCGCAGCCCTGGCCT...TGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | TGTGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCCACCCCTTGGCCACATATaGCAGGGCTCTCTGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CGYQEMWLDQPWMPEPEPPLGHI*QGSLWV Trigger: GACCCACAGAGAGCCCTGGCATATGTGGCCAAGGGG...TGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | CAGTGTGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGGGCAGGGAGCAGAGCTaGGTGTCCTGGAGTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: QCGYQEMWLDQPWMPEPEGREQS*VSWSEE Trigger: CTCTTCACTCCAGGACACCCAGCTCTGCTCCCTGCC...CTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | GAGCCAGAGCCAGGTAACAGATTAGGATGGAGGCTTCATGTGATGGAGCAGCAACTGCCAGGTTGGGGTTaGTGGCCCGAGCCCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: EPEPGNRLGWRLHVMEQQLPGWG*WPEPQG Trigger: GCCTTGGGGCTCGGGCCACCAACCCCAACCTGGCAG...TTGCTGCTCCATCACATGAAGCCTCCATCCTAATCTGTTACCTGGCTCTGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | AGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCCAGGTAACAGATATACAGCTGCCAGGTTaGGGTTGGTGGCCCGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RKCGWTSPGCQSQSQVTDIQLPG*GWWPEP Trigger: GGGCTCGGGCCACCAACCCCAACCTGGCAGCTGTAT...ATCTGTTACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | AGTGTGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCATGCTGGGGCTGCTGTaGGATTTGGGGTGTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVGTRKCGWTSPGCQSQSMLGLL*DLGCCQ Trigger: CTGGCAACACCCCAAATCCCACAGCAGCCCCAGCAT...GCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | CAGTGTGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCGCCAGACACAAAGCTaGTCCAACTCCAGCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: QCGYQEMWLDQPWMPEPERQTQS*SNSSIH Trigger: GTGGATGCTGGAGTTGGAGCAGCTTTGTGTCTGGCG...CTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | CCAGAGCCAGAGCCAGGTAACAGATTAGGATGGAGGCTTCATGTGATGGAGCAGGATGGGAGTGTCTGCTaGCTGGAGGGGCCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PEPEPGNRLGWRLHVMEQDGSVC*LEGPQS Trigger: GCTCTGTGGCCCCTCCAGCCAGCAGACACTCCCATC...CTGCTCCATCACATGAAGCCTCCATCCTAATCTGTTACCTGGCTCTGGCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | GAGCCAGGTAACAGATTAGGATGGAGGCTTCATGTGATGGAGCAGCAAACACCTCCAGGTTGGGGTTGGTaGCCCGAGCCCCAAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EPGNRLGWRLHVMEQQTPPGWGW*PEPQGP Trigger: TGGGCCTTGGGGCTCGGGCCACCAACCCCAACCTGG...AGGTGTTTGCTGCTCCATCACATGAAGCCTCCATCCTAATCTGTTACCTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | CAGTGTGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGGAGGACCAGTGGCTCTaGTATCTCTTCCTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QCGYQEMWLDQPWMPEPEEDQWL*YLFLFL Trigger: GAGGAAGAGGAAGAGATAGCAGAGCCACTGGTCCTC...CTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTAACAGATTAGGATGGAGGCTTCATGTGATGGAGCAGCAAACACCTCACCTTGGTCAGCAGGTGTaGCCAGGGCAGGCGGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: PGNRLGWRLHVMEQQTPHLGQQV*PGQAAE Trigger: TTCGGCCGCCTGCCCTGGCCACACCTGCTGACCAAG...GTGAGGTGTTTGCTGCTCCATCACATGAAGCCTCCATCCTAATCTGTTACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | TTGGACCAGCCCTGGATGCCAGAGCCAGAGCCAGGTAACAGATTAGGATGGAGGGGGACACTGGAGACATaGGCGTGTTCTGCATGGACT | + |
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Preference number: 4 (lower is better) Translates to: LDQPWMPEPEPGNRLGWRGTLET*ACSAWT Trigger: AGTCCATGCAGAACACGCCCATGTCTCCAGTGTCCC...CCTCCATCCTAATCTGTTACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | CCAGAGCCAGAGCCAGGTAACAGATTAGGATGGAGGCTTCATGTGATGGAGCAGGACAGAGCCCCTTTGTaGCCTGGATGGCTAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: PEPEPGNRLGWRLHVMEQDRAPL*PGWLVR Trigger: ACGCACTAGCCATCCAGGGCACAAAGGGGCTCTGTC...CTGCTCCATCACATGAAGCCTCCATCCTAATCTGTTACCTGGCTCTGGCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | AGCAGAGCTGGGTGTCCTGGAGTGAAGAGTAGACTCCAGCAGTTCCACAAGTTCGAGGACCAGTGGCTCTaGTATCTCTTCCTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SRAGCPGVKSRLQQFHKFEDQWL*YLFLFL Trigger: GAGGAAGAGGAAGAGATAGCAGAGCCACTGGTCCTC...GAACTTGTGGAACTGCTGGAGTCTACTCTTCACTCCAGGACACCCAGCTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108499.2 |
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| CDS-3UTR GCA 90 bp | GACCAGCCCTGGATGCCAGAGCCAGAGCCAGGTAACAGATTAGGATGGAGGCTTTGGGATTTGGGGTGTTaGCAGATGATTGAGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: DQPWMPEPEPGNRLGWRLWDLGC*QMIEQG Trigger: ACCTTGCTCAATCATCTGGCAACACCCCAAATCCCA...AAGCCTCCATCCTAATCTGTTACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | CATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTGCCGGGGGCCAGGAGTTaGGTTGGGCCTGCTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HVMEQQTPHRYILFIHSLPGARS*VGPAVR Trigger: CCTGACAGCAGGCCCAACCCAACTCCTGGCCCCCGG...CAATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | GCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCGGCCAGGAGTTGGGTTaGGCCTGCTGTCAGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ASCDGAANTSQIHSLHTFGQELG*ACCQGS Trigger: ACTGCCCTGACAGCAGGCCCAACCCAACTCCTGGCC...GAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | GATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAATGTGGTTGGACCCCTTTGTGCCCTGGATaGCTAGTGCGTTTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: DRKVRNSISVGTRKCGWTPLCPG*LVRLPG Trigger: CCCTGGCAAACGCACTAGCCATCCAGGGCACAAAGG...GGTCCAACCACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR CCA 90 bp | AACAGATTAGGATGGAGGCTTCATGTGATGGAGCAGCAAACACCTCACAGATACAGCAGTTTGCAGGAATaGTGGGCAGGGAGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: NRLGWRLHVMEQQTPHRYSSLQE*WAGSRA Trigger: AGCTCTGCTCCCTGCCCACCATTCCTGCAAACTGCT...GTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGCCTCCATCCTAATCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS-3UTR GCA 90 bp | TGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAAGGCGATGGGAGTGTCTaGTGGCTGGAGGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WSLFDRKVRNSISVGTRKGDGSV*WLEGPQ Trigger: CTGTGGCCCCTCCAGCCAGCAGACACTCCCATCGCC...TTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR GCA 90 bp | GATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAATGTGGTTGGACCCAGCATCCACGACATTaGCCCCAGCGACAAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: DRKVRNSISVGTRKCGWTQHPRH*PQRQAT Trigger: AGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGCTG...GGTCCAACCACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATGGGGTTTCAGCAGTTTaGAGGAATGGTGGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MEASCDGAANTSQIHSLHGVSAV*RNGGQG Trigger: TCCCTGCCCACCATTCCTGCAAACTGCTGAAACCCC...ATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGCCTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCACTTCCCAGCGAGATCTaGGCTGGAGGCCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGLYLIEKSEIPSVWVPLPSEI*AGGQGC Trigger: GCAGCCCTGGCCTCCAGCCCAGATCTCGCTGGGAAG...TGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | GATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTGCTGCTAGTTTGCAGGAATGGTaGGCAGGGAGCAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGAANTSQIHSLHTFIAASLQEW*AGSRAG Trigger: CCCAGCTCTGCTCCCTGCCCACCATTCCTGCAAACT...AGCAGCAATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | TCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTCGTTGCTGTCCACGGTaGCCAGGGCACTGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SCDGAANTSQIHSLHTFIRCCPR*PGHCSL Trigger: CAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACG...AATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | GTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTGCTGCCTTTTCAGCCAGCATaGCAGGCTTGGTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VMEQQTPHRYILFIHSLLPFQPA*QAWSAG Trigger: ACCTGCTGACCAAGCCTGCCATGCTGGCTGAAAAGG...CAGCAATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | GCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCGGTATGGCAGAACAATaGACAGAGCCCCTTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASCDGAANTSQIHSLHTFGMAEQ*TEPLCA Trigger: GGCACAAAGGGGCTCTGTCCATTGTTCTGCCATACC...GAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | TCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTAGCCCCAAGGCCCAGTaGGGTTCCATTGGTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCDGAANTSQIHSLHTFISPKAQ*GSIGMA Trigger: TGCCATACCAATGGAACCCCACTGGGCCTTGGGGCT...AATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | TCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTAGCCACTGGGGACACTaGAGACATGGGCGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCDGAANTSQIHSLHTFISHWGH*RHGRVL Trigger: CAGAACACGCCCATGTCTCCAGTGTCCCCAGTGGCT...AATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGACTGGGTGTCCTGGAGTaGAGAGTAGACTCCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLYLIEKSEIPSVWVPGLGVLE*RVDSSS Trigger: ACTGCTGGAGTCTACTCTTCACTCCAGGACACCCAG...TCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAATGTCTCTCTGTGGGTCTTTaGTGCTGGGGCTGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFDRKVRNSISVGTRKCLSVGL*CWGCCG Trigger: CCCACAGCAGCCCCAGCATCAAAGACCCACAGAGAG...ACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR GCA 90 bp | TTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAATGTGGTTCCCTACTGTGCAGCTaGCTCAGAGCCAGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFDRKVRNSISVGTRKCGSLLCS*LRAREL Trigger: CAGCTCTCTGGCTCTGAGGCAGCTGCACAGTAGGGA...ACCACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGTCACGAAGGATGAGTaGACAGGCCCAGGCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGLYLIEKSEIPSVWVPVTKDE*TGPGTR Trigger: CCTAGTGCCTGGGCCTGTCCACTCATCCTTCGTGAC...TGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATAAAGGAACTGTTGATTaGGGAGATGAGGAGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MEASCDGAANTSQIHSLHKGTVD*GDEEEH Trigger: ATGCTCCTCCTCATCTCCTCAATCAACAGTTCCTTT...ATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGCCTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CCA 90 bp | CATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTGCCAGTGGGGTTCCATTaGTATGGCAGAACAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HVMEQQTPHRYILFIHSLPVGFH*YGRTMD Trigger: GTCCATTGTTCTGCCATACCAATGGAACCCCACTGG...CAATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAATGTCGAGGCAGAAGAAGCTaGAGCGCAGGCTCTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLFDRKVRNSISVGTRKCRGRRS*SAGSKE Trigger: TTCCTTAGAGCCTGCGCTGCAGCTTCTTCTGCCTCG...ACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| 3UTR CAA 72 bp | CAAACACCTCACAGATACATTCTCTTCATACATTCATaGCTGCTAGACCTTCTCTGTCTGGCTCTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTPHRYILFIHS*LLDLLCLALKF Trigger: GAACTTGAGAGCCAGACAGAGAAGGTCTAGCAGCAATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS CCA 90 bp | AGAGCAGGCAGACCCGTGGGCAGCCCCAGGCCGGGGGCCAGGAGTTaGGTTGGGCCTGCTGTCAGGGCAGTTGAGTTTCCTGAAGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RAGRPVGSPRPGARS*VGPAVRAVEFPEEL Trigger: TAGCTCTTCAGGAAACTCAACTGCCCTGACAGCAGGCCCAACCCAACTCCTGGCCCCCGGCCTGGGGCTGCCCACGGGTCTGCCTGCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS CCA 90 bp | CCCAGTTGGGAACATGTGGCTGCCGGGCTGATAATGGCGCTGTGGTaGTACACACCAGGGCGATGGGAGTGTCTGCTGGCTGGAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSWEHVAAGLIMALW*YTPGRWECLLAGGA Trigger: GGCCCCTCCAGCCAGCAGACACTCCCATCGCCCTGGTGTGTACCACCACAGCGCCATTATCAGCCCGGCAGCCACATGTTCCCAACTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS CCA 90 bp | AGACCCCAGAATGTGGCACCTGCCGGGCTGATAATGGCGCTGTGGTaGTACACACCAGGGCGATGGGAGTGTCTGCTGGCTGGAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPQNVAPAGLIMALW*YTPGRWECLLAGGA Trigger: GGCCCCTCCAGCCAGCAGACACTCCCATCGCCCTGGTGTGTACCACCACAGCGCCATTATCAGCCCGGCAGGTGCCACATTCTGGGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100903.3 |
||
| CDS CCA 90 bp | GAGCATGGAGCCGTTGCTGTCCACGGTGGCCAGGGCACTGCTCACTaGGGTTTCAGCAGTTTGCAGGAATGGTGGGCAGGGAGCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EHGAVAVHGGQGTAH*GFSSLQEWWAGSRA Trigger: AGCTCTGCTCCCTGCCCACCATTCCTGCAAACTGCTGAAACCCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGGCTCCATGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS-3UTR CAA 90 bp | TTGGACCAGCCCTGGATGCCAGAGCCAGAGCCAGGTAACAGATTAGGATGGAGGGGGCCAGGAGTTGGGTaGGGCCTGCTGTCAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDQPWMPEPEPGNRLGWRGPGVG*GLLSGQ Trigger: CTGCCCTGACAGCAGGCCCAACCCAACTCCTGGCCC...CCTCCATCCTAATCTGTTACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | TGGGTACCAGGAAATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCCAGGAATACAGCTGCCAGGTaGGGGTTGGTGGCCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WVPGNVVGPALDARARARNTAAR*GLVARA Trigger: GGCTCGGGCCACCAACCCCAACCTGGCAGCTGTATT...CCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACATTTCCTGGTACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS GCA 90 bp | GGAGGGGCCACAGAGCCCAAGTTTCCTCTTGGGCTGTCCCTACTGTaGAGCTGCCTCAGAGCCAGAGAGCTGCTAACAGCCAGCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGATEPKFPLGLSLL*SCLRARELLTASSN Trigger: GTTGCTGCTGGCTGTTAGCAGCTCTCTGGCTCTGAGGCAGCTGCACAGTAGGGACAGCCCAAGAGGAAACTTGGGCTCTGTGGCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS GCA 90 bp | GTTCTGCATGGACTACCGCCTGCAGTAGGGCCCCTTGGCCACATATaGCAGGGCTCTCTGTGGGTCTTTGATGCTGGGGCTGCTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLHGLPPAVGPLGHI*QGSLWVFDAGAAVG Trigger: TCCCACAGCAGCCCCAGCATCAAAGACCCACAGAGAGCCCTGGCATATGTGGCCAAGGGGCCCTACTGCAGGCGGTAGTCCATGCAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS CCA 90 bp | GCATCCACGACATTGCCCCCAGCGACAAGCAACTCTTGGCCCAGTTaGGAACATGTGGCTGCCGGGCTGATAATGGCGCTGTGGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ASTTLPPATSNSWPS*EHVAAGLIMALWWY Trigger: GTACCACCACAGCGCCATTATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS CCA 90 bp | CCAACTCCAGCATCCACGACATTGCCCCCAGCGACAAGCAACTCTTaGCCCAGTTGGGAACATGTGGCTGCCGGGCTGATAATGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPASTTLPPATSNS*PSWEHVAAGLIMAL Trigger: CAGCGCCATTATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGCTGGAGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCCTGGATGCCAGAGCCAGAGCCAGGTAACAGATTAGGATGGAGGCTTCCAGCATCCACGACATaGCCCCCAGCGACAAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DQPWMPEPEPGNRLGWRLPASTT*PPATSN Trigger: GTTGCTTGTCGCTGGGGGCAATGTCGTGGATGCTGG...AAGCCTCCATCCTAATCTGTTACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | ATGTGGTTGGACCAGCCCTGGATGCCAGAGCCAGAGCCAGGTAACAGATTAGGAGGGCTGCTGTGGGATTaGGGGTGTTGCCAGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: MWLDQPWMPEPEPGNRLGGLLWD*GCCQMI Trigger: AATCATCTGGCAACACCCCAAATCCCACAGCAGCCC...TCCTAATCTGTTACCTGGCTCTGGCTCTGGCATCCAGGGCTGGTCCAACCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | AGGCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATGCCGGGGGCCAGGAGTaGGGTTGGGCCTGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLHVMEQQTPHRYILFIHAGGQE*GWACCQ Trigger: CTGACAGCAGGCCCAACCCAACTCCTGGCCCCCGGC...ATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS TCA 90 bp | ATTGAGCAAGGTGCAAGTCATGGCTTTGGCCCCTCTGGAGATCCCTaGAGCCACCATCCCCAACATATCGGCTTCTGTGTCATCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IEQGASHGFGPSGDP*SHHPQHIGFCVIQV Trigger: AACCTGGATGACACAGAAGCCGATATGTTGGGGATGGTGGCTTCAGGGATCTCCAGAGGGGCCAAAGCCATGACTTGCACCTTGCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS-3UTR CAA 90 bp | TGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAAGCTGCCAGGTTGGGGTaGGTGGCCCGAGCCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSLFDRKVRNSISVGTRKAARLG*VARAPR Trigger: CCTTGGGGCTCGGGCCACCAACCCCAACCTGGCAGC...TTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGGTCTTTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGCCAGCATGGCAGGCTaGGTCAGCAGGTGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGLYLIEKSEIPSVWVPASMAG*VSRCGQ Trigger: CTGGCCACACCTGCTGACCAAGCCTGCCATGCTGGC...TGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAAAGACCAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | AGGCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTGGGGTTTCAGCAGTTaGCAGGAATGGTGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLHVMEQQTPHRYILFIHWGFSS*QEWWAG Trigger: CCCTGCCCACCATTCCTGCAAACTGCTGAAACCCCA...ATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | TTATTTGATAGAAAAGTCAGAAATTCCATCAGTGTGGGTACCAGGAAATGTGGTAGGAGCATGGAGCCGTaGCTGTCCACGGTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFDRKVRNSISVGTRKCGRSMEP*LSTVAR Trigger: CCTGGCCACCGTGGACAGCAACGGCTCCATGCTCCT...ACCACATTTCCTGGTACCCACACTGATGGAATTTCTGACTTTTCTATCAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | ATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTGCTGCTAGTGCAAGTCATGGCTTaGGCCCCTCTGGAGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MEQQTPHRYILFIHSLLLVQVMA*APLEIP Trigger: AGGGATCTCCAGAGGGGCCAAAGCCATGACTTGCAC...TAGCAGCAATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATGCAGAACACCAGTACTaGGGGATAGATGTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MEASCDGAANTSQIHSLHAEHQY*GIDVQN Trigger: GTTCTGGACATCTATCCCCAAGTACTGGTGTTCTGC...ATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGCCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | TCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCATTGGGCTGGCTTCCAGGTaGCTGAGCAGAACACCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCDGAANTSQIHSLHTFIGLASR*LSRTPV Trigger: TACTGGTGTTCTGCTCAGCAACCTGGAAGCCAGCCC...AATGAATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS-3UTR CAA 90 bp | AGGCTTCATGTGATGGAGCAGCAAACACCTCACAGATACATTCTCTTCATACATTCTGTGTCATCCAGGTaGTCACGAAGGATGAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLHVMEQQTPHRYILFIHSVSSR*SRRMSG Trigger: TCCACTCATCCTTCGTGACAACCTGGATGACACAGA...ATGTATGAAGAGAATGTATCTGTGAGGTGTTTGCTGCTCCATCACATGAAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS GCA 72 bp | CGCTGTGGTGGTACACACCAGGGCGATGGGAGTGTCTaGTGGCTGGAGGGGCCACAGAGCCCAAGTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RCGGTHQGDGSV*WLEGPQSPSFL Trigger: GAGGAAACTTGGGCTCTGTGGCCCCTCCAGCCAGCAGACACTCCCATCGCCCTGGTGTGTACCACCACAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS GCA 72 bp | CTGGAGACATGGGCGTGTTCTGCATGGACTACCGCCTaGAGTAGGGCCCCTTGGCCACATATGCCAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LETWACSAWTTA*SRAPWPHMPGL Trigger: GAGCCCTGGCATATGTGGCCAAGGGGCCCTACTGCAGGCGGTAGTCCATGCAGAACACGCCCATGTCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS GCA 72 bp | GCATGGAGCCGTTGCTGTCCACGGTGGCCAGGGCACTaGTCACTGGGGTTTCAGCAGTTTGCAGGAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AWSRCCPRWPGH*SLGFQQFAGMV Trigger: CACCATTCCTGCAAACTGCTGAAACCCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGGCTCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS CAA 72 bp | CTGTTGATTGAGGAGATGAGGAGGAGCATGGAGCCGTaGCTGTCCACGGTGGCCAGGGCACTGCTCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLIEEMRRSMEP*LSTVARALLTG Trigger: CCCAGTGAGCAGTGCCCTGGCCACCGTGGACAGCAACGGCTCCATGCTCCTCCTCATCTCCTCAATCAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
||
| CDS CCA 72 bp | ACATTGCCCCCAGCGACAAGCAACTCTTGGCCCAGTTaGGAACATGTGGCTGCCGGGCTGATAATGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLPPATSNSWPS*EHVAAGLIMAL Trigger: CAGCGCCATTATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
||
| CDS CCA 72 bp | GCATCCACGACATTGCCCCCAGCGACAAGCAACTCTTaGCCCAGTTGGGAACATGTGGCTGCCGGGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: ASTTLPPATSNS*PSWEHVAAGLI Trigger: TATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 72 bp | GACATTGCCCCCAGCGACAAGCAACTCTTGGCCCAGTaGGGAACATGTGGCTGCCGGGCTGATAATGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: DIAPSDKQLLAQ*GTCGCRADNGA Trigger: AGCGCCATTATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 72 bp | AGCATCCACGACATTGCCCCCAGCGACAAGCAACTCTaGGCCCAGTTGGGAACATGTGGCTGCCGGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SIHDIAPSDKQL*AQLGTCGCRAD Trigger: ATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 90 bp | AGCATCCACGACATTGCCCCCAGCGACAAGCAACTCTTGGCCCAGTaGGGAACATGTGGCTGCCGGGCTGATAATGGCGCTGTGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SIHDIAPSDKQLLAQ*GTCGCRADNGAVVV Trigger: TACCACCACAGCGCCATTATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 90 bp | TCCAACTCCAGCATCCACGACATTGCCCCCAGCGACAAGCAACTCTaGGCCCAGTTGGGAACATGTGGCTGCCGGGCTGATAATGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: SNSSIHDIAPSDKQL*AQLGTCGCRADNGA Trigger: AGCGCCATTATCAGCCCGGCAGCCACATGTTCCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGCTGGAGTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 90 bp | CCTGAAGCCACCATCCCCAACATATCGGCTTCTGTGTCATCCAGGTaGTCACGAAGGATGAGTGGACAGGCCCAGGCACTAGGTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PEATIPNISASVSSR*SRRMSGQAQALGAG Trigger: CCCTGCACCTAGTGCCTGGGCCTGTCCACTCATCCTTCGTGACAACCTGGATGACACAGAAGCCGATATGTTGGGGATGGTGGCTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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| CDS GCA 72 bp | GACACAAAGCTGCTCCAACTCCAGCATCCACGACATTaGCCCCAGCGACAAGCAACTCTTGGCCCAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: DTKLLQLQHPRH*PQRQATLGPVG Trigger: CCCAACTGGGCCAAGAGTTGCTTGTCGCTGGGGGCAATGTCGTGGATGCTGGAGTTGGAGCAGCTTTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 72 bp | CAGGCCCAGGCACTAGGTGCAGGGCTGGCTTCCAGGTaGCTGAGCAGAACACCAGTACTTGGGGATAGATGT | + |
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Preference number: 6 (lower is better) Translates to: QAQALGAGLASR*LSRTPVLGDRC Trigger: ACATCTATCCCCAAGTACTGGTGTTCTGCTCAGCAACCTGGAAGCCAGCCCTGCACCTAGTGCCTGGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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| CDS CAA 90 bp | ATGAGTGGACAGGCCCAGGCACTAGGTGCAGGGCTGGCTTCCAGGTaGCTGAGCAGAACACCAGTACTTGGGGATAGATGTCCAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: MSGQAQALGAGLASR*LSRTPVLGDRCPEP Trigger: TGGTTCTGGACATCTATCCCCAAGTACTGGTGTTCTGCTCAGCAACCTGGAAGCCAGCCCTGCACCTAGTGCCTGGGCCTGTCCACTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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| CDS GCA 72 bp | TGTTGCATGAGGATGTACCACCGCCAGACACAAAGCTaGTCCAACTCCAGCATCCACGACATTGCCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CCMRMYHRQTQS*SNSSIHDIAPS Trigger: GCTGGGGGCAATGTCGTGGATGCTGGAGTTGGAGCAGCTTTGTGTCTGGCGGTGGTACATCCTCATGCAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS GCA 72 bp | AGAGCTATTGTAGAAGAGACCCCAGAATGTGGCACCTaGCGGGCTGATAATGGCGCTGTGGTGGTACACACC | + |
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Preference number: 6 (lower is better) Translates to: RAIVEETPECGT*RADNGAVVVHT Trigger: GGTGTGTACCACCACAGCGCCATTATCAGCCCGGCAGGTGCCACATTCTGGGGTCTCTTCTACAATAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100903.3 |
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| CDS CCA 72 bp | AGGGCTCTCTGTGGGTCTTTGATGCTGGGGCTGCTGTaGGATTTGGGGTGTTGCCAGATGATTGAGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: RALCGSLMLGLL*DLGCCQMIEQG Trigger: ACCTTGCTCAATCATCTGGCAACACCCCAAATCCCACAGCAGCCCCAGCATCAAAGACCCACAGAGAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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| CDS CAA 72 bp | ACCATCCCCAACATATCGGCTTCTGTGTCATCCAGGTaGTCACGAAGGATGAGTGGACAGGCCCAGGCACTA | + |
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Preference number: 6 (lower is better) Translates to: TIPNISASVSSR*SRRMSGQAQAL Trigger: TAGTGCCTGGGCCTGTCCACTCATCCTTCGTGACAACCTGGATGACACAGAAGCCGATATGTTGGGGATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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| CDS CAA 72 bp | CTCTGTGGGTCTTTGATGCTGGGGCTGCTGTGGGATTaGGGGTGTTGCCAGATGATTGAGCAAGGTGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: LCGSLMLGLLWD*GCCQMIEQGAS Trigger: ACTTGCACCTTGCTCAATCATCTGGCAACACCCCAAATCCCACAGCAGCCCCAGCATCAAAGACCCACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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| CDS CAA 72 bp | TGTAGAAGAGACCCCAGAATGTGGCACCTAAGCCTGTaGCATGAGGATGTACCACCGCCAGACACAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: CRRDPRMWHLSL*HEDVPPPDTKL Trigger: CAGCTTTGTGTCTGGCGGTGGTACATCCTCATGCAACAGGCTTAGGTGCCACATTCTGGGGTCTCTTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 90 bp | AAGAGCTATTGTAGAAGAGACCCCAGAATGTGGCACCTAAGCCTGTaGCATGAGGATGTACCACCGCCAGACACAAAGCTGCTCCAACTC | + |
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Preference number: 6 (lower is better) Translates to: KSYCRRDPRMWHLSL*HEDVPPPDTKLLQL Trigger: GAGTTGGAGCAGCTTTGTGTCTGGCGGTGGTACATCCTCATGCAACAGGCTTAGGTGCCACATTCTGGGGTCTCTTCTACAATAGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 90 bp | AGAACACCAGTACTTGGGGATAGATGTCCAGAACCAAAGGAACTGTaGATTGAGGAGATGAGGAGGAGCATGGAGCCGTTGCTGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: RTPVLGDRCPEPKEL*IEEMRRSMEPLLST Trigger: CGTGGACAGCAACGGCTCCATGCTCCTCCTCATCTCCTCAATCAACAGTTCCTTTGGTTCTGGACATCTATCCCCAAGTACTGGTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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| CDS CCA 72 bp | TTCCTGAAGAGCTATTGTAGAAGAGACCCCAGAATGTaGCACCTAAGCCTGTTGCATGAGGATGTACCACCG | + |
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Preference number: 6 (lower is better) Translates to: FLKSYCRRDPRM*HLSLLHEDVPP Trigger: CGGTGGTACATCCTCATGCAACAGGCTTAGGTGCCACATTCTGGGGTCTCTTCTACAATAGCTCTTCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076443.10 |
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| CDS CAA 72 bp | GTACTTGGGGATAGATGTCCAGAACCAAAGGAACTGTaGATTGAGGAGATGAGGAGGAGCATGGAGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: VLGDRCPEPKEL*IEEMRRSMEPL Trigger: CAACGGCTCCATGCTCCTCCTCATCTCCTCAATCAACAGTTCCTTTGGTTCTGGACATCTATCCCCAAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076443.10 ENSMUST00000100903.3 |
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