Pregenerated sensors for GGT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006345Ensembl transcript IDs: ENSMUST00000006508.10, ENSMUST00000124259.8, ENSMUST00000125770.8, ENSMUST00000128886.8, ENSMUST00000129020.3, ENSMUST00000129232.8, ENSMUST00000131565.8, ENSMUST00000134503.8, ENSMUST00000139459.8, ENSMUST00000140219.8, ENSMUST00000143226.8, ENSMUST00000143792.8, ENSMUST00000145079.8, ENSMUST00000145928.8, ENSMUST00000151212.8, ENSMUST00000152657.8, ENSMUST00000155186.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGTTCTCGTCCCTTGGCTaGGGGTCAATCTTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QLGGGLHLLRSLCPTQRRFSSLG*GSILPL Trigger: AAGAGGCAAGATTGACCCGCAGCCAAGGGACGAGAA...CCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCTTCTCGTCCCTTGGCTaGGGGTCAATCTTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLAVASIYCAPSVPPRGGFSSLG*GSILPL Trigger: AAGAGGCAAGATTGACCCGCAGCCAAGGGACGAGAA...GCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| 3UTR-3UTR CAA 90 bp | CGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCTGGTGGCCTCCATTTATaGCGCTCCCTCTGTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: RWPPFIALPLSHPEAACSGGLHL*RSLCPT Trigger: GGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACC...AGAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 ENSMUST00000155186.2 |
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| CDS-3UTR GCA 90 bp | CGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCCTATTGCCAAACCCTTaGCCACAGGGAAGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLAVASIYCAPSVPPRGLLPNP*PQGSRG Trigger: GCCACGGCTTCCCTGTGGGCAAGGGTTTGGCAATAG...GCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR GCA 90 bp | CGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCTGGCAGCCACAGCACTaGCATCCTCTGAAACCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSLAVASIYCAPSVPPRGWQPQH*HPLKPQ Trigger: CTGCGGTTTCAGAGGATGGCAGTGCTGTGGCTGCCA...GCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| 3UTR CAA 72 bp | CCACCCAGAGGCGGCATGTTCTCCAACGTCCCACTCTaGCTCCTGTTCCCATTCTCGTCCCTTGGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPRGGMFSNVPL*LLFPFSSLGCG Trigger: CCCGCAGCCAAGGGACGAGAATGGGAACAGGAGCAAGAGTGGGACGTTGGAGAACATGCCGCCTCTGGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 ENSMUST00000155186.2 |
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| CDS-3UTR TCA 90 bp | CTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAACCGTCTCTCCTTCTTaGAGCACCTTCCCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPAAWRWPPFIALPLSHPTVSPS*STFPWR Trigger: CCGCCAAGGGAAGGTGCTTCAAGAAGGAGAGACGGT...TGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR TCA 90 bp | GCTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCGCCTCCACGATACGGTaGTACGTCAGTGCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRSLAVASIYCAPSVPPASTIR*YVSAFC Trigger: ACAGAAGGCACTGACGTATCACCGTATCGTGGAGGC...GGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR GCA 90 bp | GCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCCTATTGCCAAACCCTTaGCCACAGGGAAGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVASIYCAPSVPPRGGMFLLPNP*PQGSRG Trigger: GCCACGGCTTCCCTGTGGGCAAGGGTTTGGCAATAG...GAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| 3UTR CAA 72 bp | AAAGGCTTCCCGCAGCTTGGCGGTGGCCTCCATTTATaGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGFPQLGGGLHL*RSLCPTQRRHV Trigger: AACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAGCCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR TCA 90 bp | CGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCTACCGTCTCTCCTTCTTaGAGCACCTTCCCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RWPPFIALPLSHPEAACSTVSPS*STFPWR Trigger: CCGCCAAGGGAAGGTGCTTCAAGAAGGAGAGACGGT...AGAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR GCA 90 bp | CAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGTTTGTCCAGGGCTATTaGCAAACCCTTGCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGGGLHLLRSLCPTQRRFVQGY*QTLAHR Trigger: CCTGTGGGCAAGGGTTTGGCAATAGCCCTGGACAAA...CCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR GCA 90 bp | CTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCATTTGTCCAGGGCTATTaGCAAACCCTTGCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPAAWRWPPFIALPLSHPFVQGY*QTLAHR Trigger: CCTGTGGGCAAGGGTTTGGCAATAGCCCTGGACAAA...TGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR TCA 90 bp | CGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCAGTCCTTGGAGTTGTTaGACATGGTGGTATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSLAVASIYCAPSVPPRGSPWSC*TWWYWP Trigger: TGGCCAATACCACCATGTTCAACAACTCCAAGGACT...GCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGAGTCCTTGGAGTTGTTaGACATGGTGGTATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGGGLHLLRSLCPTQRRSPWSC*TWWYWP Trigger: TGGCCAATACCACCATGTTCAACAACTCCAAGGACT...CCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CCA 90 bp | CGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCATGTCTTTCACAATCTaGGCTGTGAGGCTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLAVASIYCAPSVPPRGMSFTI*AVRLPL Trigger: CAATGGGAGCCTCACAGCCCAGATTGTGAAAGACAT...GCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAATGTCTTTCACAATCTaGGCTGTGAGGCTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LPAAWRWPPFIALPLSHPMSFTI*AVRLPL Trigger: CAATGGGAGCCTCACAGCCCAGATTGTGAAAGACAT...TGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS CCA 90 bp | GTCCAATCTCTGAGCAGCGCTTGGCGTCGGTGGCCACCGCCGCCCTaGAGTACACGTGGTCGGGCTTCCCAGAGGTGTAGGGCAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VQSLSSAWRRWPPPP*STRGRASQRCRATR Trigger: TCTGGTTGCCCTACACCTCTGGGAAGCCCGACCACGTGTACTCCAGGGCGGCGGTGGCCACCGACGCCAAGCGCTGCTCAGAGATTGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000006508.10 ENSMUST00000124259.8 ENSMUST00000125770.8 ENSMUST00000128886.8 ENSMUST00000129232.8 ENSMUST00000131565.8 ENSMUST00000134503.8 ENSMUST00000139459.8 ENSMUST00000140219.8 ENSMUST00000143226.8 ENSMUST00000143792.8 ENSMUST00000145079.8 ENSMUST00000145928.8 ENSMUST00000151212.8 ENSMUST00000152657.8 |
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| CDS-3UTR CAA 90 bp | TTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGGCTATTGCCAAACCCTaGCCCACAGGGAAGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPQLGGGLHLLRSLCPTQAIAKP*PTGKPW Trigger: CCACGGCTTCCCTGTGGGCAAGGGTTTGGCAATAGC...CTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | CGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCTGCTATTGCCAAACCCTaGCCCACAGGGAAGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPPFIALPLSHPEAACSAIAKP*PTGKPW Trigger: CCACGGCTTCCCTGTGGGCAAGGGTTTGGCAATAGC...AGAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | GCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCTTGAAGCACCTTCCCTaGGCGGCAGAACACCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVASIYCAPSVPPRGGMFLKHLP*AAEHLA Trigger: TGCGAGGTGTTCTGCCGCCAAGGGAAGGTGCTTCAA...GAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCATTGAAGCACCTTCCCTaGGCGGCAGAACACCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPAAWRWPPFIALPLSHPLKHLP*AAEHLA Trigger: TGCGAGGTGTTCTGCCGCCAAGGGAAGGTGCTTCAA...TGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCACACCGTCTCTCCTTCTaGAAGCACCTTCCCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPAAWRWPPFIALPLSHPHRLSF*KHLPLA Trigger: CGCCAAGGGAAGGTGCTTCAAGAAGGAGAGACGGTG...TGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | TTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGCACCGTCTCTCCTTCTaGAAGCACCTTCCCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FPQLGGGLHLLRSLCPTQHRLSF*KHLPLA Trigger: CGCCAAGGGAAGGTGCTTCAAGAAGGAGAGACGGTG...CTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | AGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCTTGAACATGGTGGTATaGGCCAACCTGGGAGCTACC | + |
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Preference number: 5 (lower is better) Translates to: SLAVASIYCAPSVPPRGGLNMVV*ANLGAT Trigger: GGTAGCTCCCAGGTTGGCCAATACCACCATGTTCAA...GCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | GCTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCGAGTCCTTGGAGTTGTaGAACATGGTGGTATTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ASRSLAVASIYCAPSVPPESLEL*NMVVLA Trigger: GGCCAATACCACCATGTTCAACAACTCCAAGGACTC...GGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | GCTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCGCTACCTCACGGGCATaGATAACCTCAACTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: ASRSLAVASIYCAPSVPPATSRA*ITSTFP Trigger: AGGAAAAGTTGAGGTTATCAATGCCCGTGAGGTAGC...GGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | CGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCTTTGAACATGGTGGTATaGGCCAACCTGGGAGCTACC | + |
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Preference number: 5 (lower is better) Translates to: RWPPFIALPLSHPEAACSLNMVV*ANLGAT Trigger: GGTAGCTCCCAGGTTGGCCAATACCACCATGTTCAA...AGAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | GCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCGCTACCTCACGGGCATaGATAACCTCAACTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AVASIYCAPSVPPRGGMFATSRA*ITSTFP Trigger: AGGAAAAGTTGAGGTTATCAATGCCCGTGAGGTAGC...GAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | GCTTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCTCAGAGTCCTTGGAGTaGTTGAACATGGTGGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: ASRSLAVASIYCAPSVPPSESLE*LNMVVL Trigger: CAATACCACCATGTTCAACAACTCCAAGGACTCTGA...GGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | TTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGCCTTCTTCAGAGTCCTaGGAGTTGTTGAACATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPQLGGGLHLLRSLCPTQPSSES*ELLNMV Trigger: CACCATGTTCAACAACTCCAAGGACTCTGAAGAAGG...CTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | TTCCCGCAGCTTGGCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGTCAGAGTCCTTGGAGTaGTTGAACATGGTGGTATTG | + |
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Preference number: 5 (lower is better) Translates to: FPQLGGGLHLLRSLCPTQSESLE*LNMVVL Trigger: CAATACCACCATGTTCAACAACTCCAAGGACTCTGA...CTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGCCAAGCTGCGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | GTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCTCCCCTTCTTCAGAGTCCTaGGAGTTGTTGAACATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VASIYCAPSVPPRGGMFSPSSES*ELLNMV Trigger: CACCATGTTCAACAACTCCAAGGACTCTGAAGAAGG...GGAGAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS-3UTR CAA 90 bp | GCGGTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCCTCTTCGGAGAGAAGTaGTATCCTTTGAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: AVASIYCAPSVPPRGGMFLFGEK*YPLRMF Trigger: GAACATCCTCAAAGGATACAACTTCTCTCCGAAGAG...GAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS TCA 90 bp | GGACAGCCACTGAAAGGCCACCTTCTTCAGAGTCCTTGGAGTTGTTaGACATGGTGGTATTGGCCAACCTGGGAGCTACCTCACGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: GQPLKGHLLQSPWSC*TWWYWPTWELPHGH Trigger: ATGCCCGTGAGGTAGCTCCCAGGTTGGCCAATACCACCATGTTCAACAACTCCAAGGACTCTGAAGAAGGTGGCCTTTCAGTGGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000006508.10 ENSMUST00000124259.8 ENSMUST00000129020.3 ENSMUST00000129232.8 ENSMUST00000134503.8 ENSMUST00000139459.8 ENSMUST00000143226.8 ENSMUST00000143792.8 ENSMUST00000145928.8 |
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| CDS-3UTR CAA 90 bp | GTGGCCTCCATTTATTGCGCTCCCTCTGTCCCACCCAGAGGCGGCATGTTCTCCCTCTTCGGAGAGAAGTaGTATCCTTTGAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: VASIYCAPSVPPRGGMFSLFGEK*YPLRMF Trigger: GAACATCCTCAAAGGATACAACTTCTCTCCGAAGAG...GGAGAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS TCA 90 bp | ACTTCTGTATGGTGGTGCCGAATCTTCAGGCCTGCAGTCACCACCTaGTCAATGTCTTTCTCTACCGTTGTGGTATTAGGTAAAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TSVWWCRIFRPAVTT*SMSFSTVVVLGKSW Trigger: CCAGCTTTTACCTAATACCACAACGGTAGAGAAAGACATTGATCAGGTGGTGACTGCAGGCCTGAAGATTCGGCACCACCATACAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS CCA 72 bp | TGGGTACCCCCTGAGGCTCCGACCACCATGCGAACCTaGCCGTCCTTATCCAGGATGATTGAGGGACACATG | + |
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Preference number: 6 (lower is better) Translates to: WVPPEAPTTMRT*PSLSRMIEGHM Trigger: CATGTGTCCCTCAATCATCCTGGATAAGGACGGCCAGGTTCGCATGGTGGTCGGAGCCTCAGGGGGTACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS CAA 90 bp | CAGCTTCGGCATAGTCACCGTCTCTCCTTCTTGAAGCACCTTCCCTaGGCGGCAGAACACCTCGCACAAGGCAGGGGTCTTCTCAATGAC | + |
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Preference number: 6 (lower is better) Translates to: QLRHSHRLSFLKHLP*AAEHLAQGRGLLND Trigger: GTCATTGAGAAGACCCCTGCCTTGTGCGAGGTGTTCTGCCGCCAAGGGAAGGTGCTTCAAGAAGGAGAGACGGTGACTATGCCGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000006508.10 ENSMUST00000124259.8 ENSMUST00000129020.3 ENSMUST00000134503.8 ENSMUST00000139459.8 ENSMUST00000143792.8 |
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| CDS CAA 90 bp | GGGACAGCCACTGAAAGGCCACCTTCTTCAGAGTCCTTGGAGTTGTaGAACATGGTGGTATTGGCCAACCTGGGAGCTACCTCACGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTATERPPSSESLEL*NMVVLANLGATSRA Trigger: TGCCCGTGAGGTAGCTCCCAGGTTGGCCAATACCACCATGTTCAACAACTCCAAGGACTCTGAAGAAGGTGGCCTTTCAGTGGCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000006508.10 ENSMUST00000124259.8 ENSMUST00000129020.3 ENSMUST00000129232.8 ENSMUST00000134503.8 ENSMUST00000139459.8 ENSMUST00000143226.8 ENSMUST00000143792.8 ENSMUST00000145928.8 |
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| CDS CAA 90 bp | CCAGGGACAGCCACTGAAAGGCCACCTTCTTCAGAGTCCTTGGAGTaGTTGAACATGGTGGTATTGGCCAACCTGGGAGCTACCTCACGG | + |
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Preference number: 6 (lower is better) Translates to: PGTATERPPSSESLE*LNMVVLANLGATSR Trigger: CCGTGAGGTAGCTCCCAGGTTGGCCAATACCACCATGTTCAACAACTCCAAGGACTCTGAAGAAGGTGGCCTTTCAGTGGCTGTCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000006508.10 ENSMUST00000124259.8 ENSMUST00000129020.3 ENSMUST00000129232.8 ENSMUST00000134503.8 ENSMUST00000139459.8 ENSMUST00000143226.8 ENSMUST00000143792.8 ENSMUST00000145928.8 |
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| CDS CAA 72 bp | GAGGGACACATGGATGAAAGAGGCTGCTTACCTGGCTaGATGAAGTTGGCTGGTGAGGGGGCTACCCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: EGHMDERGCLPG*MKLAGEGATLN Trigger: GTTCAGGGTAGCCCCCTCACCAGCCAACTTCATCAAGCCAGGTAAGCAGCCTCTTTCATCCATGTGTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS CAA 90 bp | GAGGGACACATGGATGAAAGAGGCTGCTTACCTGGCTTGATGAAGTaGGCTGGTGAGGGGGCTACCCTGAACTGGTTGATGAAGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: EGHMDERGCLPGLMK*AGEGATLNWLMKLG Trigger: GCCCAACTTCATCAACCAGTTCAGGGTAGCCCCCTCACCAGCCAACTTCATCAAGCCAGGTAAGCAGCCTCTTTCATCCATGTGTCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS CAA 72 bp | GGGACAGCCACTGAAAGGCCACCTTCTTCAGAGTCCTaGGAGTTGTTGAACATGGTGGTATTGGCCAACCTG | + |
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Preference number: 6 (lower is better) Translates to: GTATERPPSSES*ELLNMVVLANL Trigger: CAGGTTGGCCAATACCACCATGTTCAACAACTCCAAGGACTCTGAAGAAGGTGGCCTTTCAGTGGCTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000006508.10 ENSMUST00000124259.8 ENSMUST00000129020.3 ENSMUST00000129232.8 ENSMUST00000134503.8 ENSMUST00000139459.8 ENSMUST00000143226.8 ENSMUST00000143792.8 ENSMUST00000145928.8 |
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| CDS CAA 72 bp | ATGGATGAAAGAGGCTGCTTACCTGGCTTGATGAAGTaGGCTGGTGAGGGGGCTACCCTGAACTGGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: MDERGCLPGLMK*AGEGATLNWLM Trigger: CATCAACCAGTTCAGGGTAGCCCCCTCACCAGCCAACTTCATCAAGCCAGGTAAGCAGCCTCTTTCATCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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| CDS CAA 72 bp | ACTGAAAGGCCACCTTCTTCAGAGTCCTTGGAGTTGTaGAACATGGTGGTATTGGCCAACCTGGGAGCTACC | + |
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Preference number: 6 (lower is better) Translates to: TERPPSSESLEL*NMVVLANLGAT Trigger: GGTAGCTCCCAGGTTGGCCAATACCACCATGTTCAACAACTCCAAGGACTCTGAAGAAGGTGGCCTTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000006508.10 ENSMUST00000124259.8 ENSMUST00000129020.3 ENSMUST00000129232.8 ENSMUST00000134503.8 ENSMUST00000139459.8 ENSMUST00000143226.8 ENSMUST00000143792.8 ENSMUST00000145928.8 |
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| CDS TCA 72 bp | TGGTGGTGCCGAATCTTCAGGCCTGCAGTCACCACCTaGTCAATGTCTTTCTCTACCGTTGTGGTATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: WWCRIFRPAVTT*SMSFSTVVVLG Trigger: ACCTAATACCACAACGGTAGAGAAAGACATTGATCAGGTGGTGACTGCAGGCCTGAAGATTCGGCACCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006508.10 ENSMUST00000134503.8 |
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