Pregenerated sensors for GGPS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021302Ensembl transcript IDs: ENSMUST00000170957.3, ENSMUST00000221338.2, ENSMUST00000221713.2, ENSMUST00000221953.2, ENSMUST00000222164.2, ENSMUST00000222687.2, ENSMUST00000222747.2, ENSMUST00000223090.2, ENSMUST00000223174.2, ENSMUST00000223329.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTaGTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SSGTEVTDSCELPCG*WELNQGPLEEQPVF Trigger: GAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223329.2 |
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| 3UTR TCA 90 bp | ACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTaGGCCATCTCTCCAGCTTCCTGGGTCTCTTCTGAATTAACATTT | + |
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Preference number: 1 (lower is better) Translates to: TEPGSSGRAASVLNL*AISPASWVSSELTF Trigger: AAATGTTAATTCAGAAGAGACCCAGGAAGCTGGAGAGATGGCTCAGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000223329.2 |
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| 3UTR CCA 90 bp | TTCCAGTCCAAGGAAGTAGACGTAATTGGCAGAATTAATGACAGATaGGACACCATAGATGCTGTGAGCCACTGGGAAACCACGTCGGAG | + |
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Preference number: 1 (lower is better) Translates to: FQSKEVDVIGRINDR*DTIDAVSHWETTSE Trigger: CTCCGACGTGGTTTCCCAGTGGCTCACAGCATCTATGGTGTCCCATCTGTCATTAATTCTGCCAATTACGTCTACTTCCTTGGACTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221713.2 |
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| 3UTR CCA 90 bp | ATAGTGAGTGAAACCTGGGTGCTTTCTGGCCTTGACCAAATGGCATaGATAGTGGGGAATGAGAACTTCCCTTCTGTCAAGTCTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: IVSETWVLSGLDQMA*IVGNENFPSVKSSQ Trigger: CTGTGAAGACTTGACAGAAGGGAAGTTCTCATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTTTCACTCACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223090.2 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGCTCCATCTTCTGGAGTGTCTGAAGACAGCTACACTTACATAT | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTIRNEI*LHLLECLKTATLTY Trigger: ATATGTAAGTGTAGCTGTCTTCAGACACTCCAGAAGATGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR GCA 90 bp | GGGTGTCAAGCATTGAAACAAACAAGTTGGGTGGAAGAGTGCCTGTaGATTCTTTCTGTCTTTTCAGACTTTGACACAGGTCTTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GCQALKQTSWVEECL*ILSVFSDFDTGLQR Trigger: TCTCTGAAGACCTGTGTCAAAGTCTGAAAAGACAGAAAGAATGCACAGGCACTCTTCCACCCAACTTGTTTGTTTCAATGCTTGACACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR TCA 90 bp | TTGGGTGGAAGAGTGCCTGTGCATTCTTTCTGTCTTTTCAGACTTTaGCACAGGTCTTCAGAGACAAAACTGAGGTACTCTTGGCATTAT | + |
|
Preference number: 1 (lower is better) Translates to: LGGRVPVHSFCLFRL*HRSSETKLRYSWHY Trigger: ATAATGCCAAGAGTACCTCAGTTTTGTCTCTGAAGACCTGTGTCAAAGTCTGAAAAGACAGAAAGAATGCACAGGCACTCTTCCACCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR GCA 90 bp | TTTGTGGGGTGTCAAGCATTGAAACAAACAAGTTGGGTGGAAGAGTaGCTGTGCATTCTTTCTGTCTTTTCAGACTTTGACACAGGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: FVGCQALKQTSWVEE*LCILSVFSDFDTGL Trigger: AAGACCTGTGTCAAAGTCTGAAAAGACAGAAAGAATGCACAGGCACTCTTCCACCCAACTTGTTTGTTTCAATGCTTGACACCCCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR TCA 90 bp | TTCTCTGTATACCAGATGATAAGAGATCTGCCGGCTTCTGCCACTTaGGTGCTGGGATTAAAGTTGTATAAATATACGTGTCTTTCCCCT | + |
|
Preference number: 1 (lower is better) Translates to: FSVYQMIRDLPASAT*VLGLKLYKYTCLSP Trigger: AGGGGAAAGACACGTATATTTATACAACTTTAATCCCAGCACTCAAGTGGCAGAAGCCGGCAGATCTCTTATCATCTGGTATACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| 3UTR GCA 90 bp | GAGTATAACCTTGAGCTTCTGATCTTCCTGACTCTACCAATGGAATaGTGGCATTACTCATGTACTCCACAAACACCTTTTCTATTATTT | + |
|
Preference number: 1 (lower is better) Translates to: EYNLELLIFLTLPME*WHYSCTPQTPFLLF Trigger: AAATAATAGAAAAGGTGTTTGTGGAGTACATGAGTAATGCCAGCATTCCATTGGTAGAGTCAGGAAGATCAGAAGCTCAAGGTTATACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR CCA 90 bp | TATAACCTTGAGCTTCTGATCTTCCTGACTCTACCAATGGAATGCTaGCATTACTCATGTACTCCACAAACACCTTTTCTATTATTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: YNLELLIFLTLPMEC*HYSCTPQTPFLLFS Trigger: AGAAAATAATAGAAAAGGTGTTTGTGGAGTACATGAGTAATGCCAGCATTCCATTGGTAGAGTCAGGAAGATCAGAAGCTCAAGGTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR TCA 90 bp | GGAGTTGCTCAACAAGGCAGCAGTGGCTACAAGAGCAGACAGGAATCCATTCCCGTGGGCCCTGGAAATTaGACCGGGGTTCTCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GVAQQGSSGYKSRQESIPVGPGN*TGVLWK Trigger: TTTCCAGAGAACCCCGGTTCAATTTCCAGGGCCCAC...GGGAATGGATTCCTGTCTGCTCTTGTAGCCACTGCTGCCTTGTTGAGCAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCATGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTCTCCTCATTTTCAACTaGAAGAAGCTACTGAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TAMWVLGTEPGSSGRAASLLIFN*KKLLSL Trigger: TAGACTCAGTAGCTTCTTTCAGTTGAAAATGAGGAG...ACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCAACAAGGCAGCAGTGGCTACAAGAGCAGACAGGAATCCATTCCCTAGCTGTGTGCCTGGTGCCTaGAAAGTCCAGAAGATGATC | + |
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Preference number: 2 (lower is better) Translates to: LLNKAAVATRADRNPFPSCVPGA*KVQKMI Trigger: GATCATCTTCTGGACTTTTCAGGCACCAGGCACACA...GCTAGGGAATGGATTCCTGTCTGCTCTTGTAGCCACTGCTGCCTTGTTGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCTTCTGATCTTCCTGACTCTACCAATGGAATGCTGGCATTACTCATGTACTAGTTACAGGTGTTGGTaGACTTCACTGTGGGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ELLIFLTLPMECWHYSCTSYRCW*TSLWAL Trigger: CAGGGCCCACAGTGAAGTTCACCAACACCTGTAACT...AGTACATGAGTAATGCCAGCATTCCATTGGTAGAGTCAGGAAGATCAGAAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCACTATGTAGCCAATCAGGACCCTCAACTTTTAATCTCTATTTCCCCTAAGCTGATGGTGGCTTTCTaGAGGTCTGGAGTTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: AHYVANQDPQLLISISPKLMVAF*RSGVQI Trigger: GATTTGAACTCCAGACCTTCAGAAAGCCACCATCAG...CTTAGGGGAAATAGAGATTAAAAGTTGAGGGTCCTGATTGGCTACATAGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAAGTGGAAGAGTGCCTGTaGATTCTTTCTGTCTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSGTEVTDSCELPCGCWEVEECL*ILSVFS Trigger: TGAAAAGACAGAAAGAATGCACAGGCACTCTTCCAC...TTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR CAA 90 bp | GTTGGGTGGAAGAGTGCCTGTGCATTCTTTCTGTCTTTTCAGACTTaGACACAGGTCTTCAGAGACAAAACTGAGGTACTCTTGGCATTA | + |
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Preference number: 2 (lower is better) Translates to: VGWKSACAFFLSFQT*TQVFRDKTEVLLAL Trigger: TAATGCCAAGAGTACCTCAGTTTTGTCTCTGAAGACCTGTGTCAAAGTCTGAAAAGACAGAAAGAATGCACAGGCACTCTTCCACCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGAACCAGAAAAGAAAAGATAAATaGGATGAAGCCACTCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: TEVTDSCELPCGCWELNQKRKDK*DEATPH Trigger: ATGAGGAGTGGCTTCATCCCATTTATCTTTTCTTTT...CTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR-3UTR TCA 90 bp | GATGGTATTAGATCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTTTGGAGTCTAGTACTTaGAAAGATAAATGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: DGIRSSGTEVTDSCELPCLESST*KDKWWG Trigger: GCCCCACCATTTATCTTTTCAAGTACTAGACTCCAA...ACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGATCTAATACCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR CAA 90 bp | TTTCAGACTTTGACACAGGTCTTCAGAGACAAAACTGAGGTACTCTaGGCATTATCATTTAGGGAAAAACAGCAGTTCTTTGGTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: FQTLTQVFRDKTEVL*ALSFREKQQFFGLF Trigger: AAAAAGACCAAAGAACTGCTGTTTTTCCCTAAATGATAATGCCAAGAGTACCTCAGTTTTGTCTCTGAAGACCTGTGTCAAAGTCTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR TCA 72 bp | CAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTaGACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: QTVVNCHVGAGN*TRVLWKSSQCS Trigger: AGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223329.2 |
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| 3UTR TCA 72 bp | GGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTaGGCCATCTCTCCAGCTTCCTGGGTCTCTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: GSSGRAASVLNL*AISPASWVSSE Trigger: TTCAGAAGAGACCCAGGAAGCTGGAGAGATGGCTCAGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000223329.2 |
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| 3UTR CCA 72 bp | GAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTaGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: EVTDSCELPCGC*ELNQGPLEEQP Trigger: TGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223329.2 |
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| 3UTR CCA 72 bp | GCTACCCAGGACAGGAGTTGCTCAACAAGGCAGCAGTaGCTACAAGAGCAGACAGGAATCCATTCCCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ATQDRSCSTRQQ*LQEQTGIHSLA Trigger: TGCTAGGGAATGGATTCCTGTCTGCTCTTGTAGCCACTGCTGCCTTGTTGAGCAACTCCTGTCCTGGGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| 3UTR GCA 72 bp | ACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTaGTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TEVTDSCELPCG*WELNQGPLEEQ Trigger: CTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223329.2 |
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| 3UTR GCA 72 bp | GAAGAGCCAATGATACAGGCTACCCAGGACAGGAGTTaGTCAACAAGGCAGCAGTGGCTACAAGAGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: EEPMIQATQDRS*STRQQWLQEQT Trigger: TGTCTGCTCTTGTAGCCACTGCTGCCTTGTTGAGCAACTCCTGTCCTGGGTAGCCTGTATCATTGGCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGGGTCTCTTAGAGTCTTaGCCAGGCATGGTAGGACAC | + |
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Preference number: 3 (lower is better) Translates to: DLLELKLQTVVNCHVGAGGLLES*PGMVGH Trigger: GTGTCCTACCATGCCTGGCAAAGACTCTAAGAGACC...CCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| 3UTR CCA 72 bp | GGAGTTACAGGTGTTGGTGAACTTCACTGTGGGCCCTaGAAATTGAACCGGGGTTCTCTGGAAAAGCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: GVTGVGELHCGP*KLNRGSLEKQL Trigger: AAGCTGCTTTTCCAGAGAACCCCGGTTCAATTTCCAGGGCCCACAGTGAAGTTCACCAACACCTGTAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR TCA 72 bp | CAGAAGATGATCTGGAAATGGAGTTACAGGTGTTGGTaGACTTCACTGTGGGCCCTGGAAATTGAACCGGGG | + |
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Preference number: 3 (lower is better) Translates to: QKMIWKWSYRCW*TSLWALEIEPG Trigger: CCCCGGTTCAATTTCCAGGGCCCACAGTGAAGTTCACCAACACCTGTAACTCCATTTCCAGATCATCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR TCA 72 bp | AGAAGCTGGCGTGTGAAAAGCTTCACCGCATCCGGGTaGTCAAGGGTTAAGACTTTTTCCAGTCCAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RSWRVKSFTASG*SRVKTFSSPRK Trigger: CTTCCTTGGACTGGAAAAAGTCTTAACCCTTGATCACCCGGATGCGGTGAAGCTTTTCACACGCCAGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221713.2 |
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| 3UTR CCA 72 bp | GAAACCTGGGTGCTTTCTGGCCTTGACCAAATGGCATaGATAGTGGGGAATGAGAACTTCCCTTCTGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: ETWVLSGLDQMA*IVGNENFPSVK Trigger: CTTGACAGAAGGGAAGTTCTCATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223090.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTCACCGCATCCGGGTGATCAAGGGTTAAGACTTTTTCCAGTCCAAGGAAGTAACCACGTCGGAGCTTaGAACTGTCTTCAATATCAT | + |
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Preference number: 3 (lower is better) Translates to: ASPHPGDQGLRLFPVQGSNHVGA*NCLQYH Trigger: ATGATATTGAAGACAGTTCAAAGCTCCGACGTGGTT...ACTTCCTTGGACTGGAAAAAGTCTTAACCCTTGATCACCCGGATGCGGTGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221713.2 |
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| 3UTR TCA 72 bp | CTATGTGTGTGCCTGGTGCCTGAAAAGTCCAGAAGATaGTCTGGAAATGGAGTTACAGGTGTTGGTGAACTT | + |
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Preference number: 3 (lower is better) Translates to: LCVCLVPEKSRR*SGNGVTGVGEL Trigger: AAGTTCACCAACACCTGTAACTCCATTTCCAGATCATCTTCTGGACTTTTCAGGCACCAGGCACACACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR CCA 72 bp | AAGGAAGTAGACGTAATTGGCAGAATTAATGACAGATaGGACACCATAGATGCTGTGAGCCACTGGGAAACC | + |
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Preference number: 3 (lower is better) Translates to: KEVDVIGRINDR*DTIDAVSHWET Trigger: GGTTTCCCAGTGGCTCACAGCATCTATGGTGTCCCATCTGTCATTAATTCTGCCAATTACGTCTACTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221713.2 |
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| 3UTR CCA 72 bp | CACACACAGACAGTCAGTCCACTATGCTGCTCTGTCTaGAACTTTCTCTGTATACCAGATGATAAGAGATCT | + |
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Preference number: 3 (lower is better) Translates to: HTQTVSPLCCSV*NFLCIPDDKRS Trigger: AGATCTCTTATCATCTGGTATACAGAGAAAGTTCCAGACAGAGCAGCATAGTGGACTGACTGTCTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| 3UTR GCA 72 bp | GCATTGAAACAAACAAGTTGGGTGGAAGAGTGCCTGTaGATTCTTTCTGTCTTTTCAGACTTTGACACAGGT | + |
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Preference number: 3 (lower is better) Translates to: ALKQTSWVEECL*ILSVFSDFDTG Trigger: ACCTGTGTCAAAGTCTGAAAAGACAGAAAGAATGCACAGGCACTCTTCCACCCAACTTGTTTGTTTCAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR CCA 72 bp | GAGCTTCTGATCTTCCTGACTCTACCAATGGAATGCTaGCATTACTCATGTACTCCACAAACACCTTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: ELLIFLTLPMEC*HYSCTPQTPFL Trigger: TAGAAAAGGTGTTTGTGGAGTACATGAGTAATGCCAGCATTCCATTGGTAGAGTCAGGAAGATCAGAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR TCA 72 bp | TTTGTTAAAAAGGACAATTTGTGGGGTGTCAAGCATTaGAACAAACAAGTTGGGTGGAAGAGTGCCTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: FVKKDNLWGVKH*NKQVGWKSACA Trigger: TGCACAGGCACTCTTCCACCCAACTTGTTTGTTTCAATGCTTGACACCCCACAAATTGTCCTTTTTAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR TCA 72 bp | GTGTCTTTCCCCTGTTTCTTATCACATAGCTTAAAATaGGCTTTAGGATGCCTGAGAATTACAGCCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: VSFPCFLSHSLK*ALGCLRITAWD Trigger: ATCCCAGGCTGTAATTCTCAGGCATCCTAAAGCTCATTTTAAGCTATGTGATAAGAAACAGGGGAAAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| 3UTR TCA 72 bp | TACCAGATGATAAGAGATCTGCCGGCTTCTGCCACTTaGGTGCTGGGATTAAAGTTGTATAAATATACGTGT | + |
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Preference number: 3 (lower is better) Translates to: YQMIRDLPASAT*VLGLKLYKYTC Trigger: ACACGTATATTTATACAACTTTAATCCCAGCACTCAAGTGGCAGAAGCCGGCAGATCTCTTATCATCTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| CDS-3UTR TCA 90 bp | CTGCCATGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGGGTGCTTTCTGGCCTTaGCCAAATGGCATGGATAGT | + |
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Preference number: 4 (lower is better) Translates to: LPCGCWELNQGPLEEQPVGAFWP*PNGMDS Trigger: ACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACC...CACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
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| CDS-3UTR CCA 90 bp | CTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTGAGCCATCTGATGCTGTGAGCCACTaGGAAACCACGTCGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LNQGPLEEQPVFLTSEPSDAVSH*ETTSEL Trigger: AAGCTCCGACGTGGTTTCCCAGTGGCTCACAGCATC...AGATGGCTCAGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR CCA 90 bp | GGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTGAGCCATCTCTCCAGCTTGATGCTGTGAGCCACTaGGAAACCACGTCGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GPLEEQPVFLTSEPSLQLDAVSH*ETTSEL Trigger: AAGCTCCGACGTGGTTTCCCAGTGGCTCACAGCATC...AAGCTGGAGAGATGGCTCAGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR TCA 90 bp | GGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTTCACCGCATCCGGGTaGTCAAGGGTTAAGACTTTT | + |
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Preference number: 4 (lower is better) Translates to: GCWELNQGPLEEQPVFLTFTASG*SRVKTF Trigger: AAAAGTCTTAACCCTTGATCACCCGGATGCGGTGAA...GGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCATGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTCTTGACCAAATGGCATaGATAGTGGGGAATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TAMWVLGTEPGSSGRAASLDQMA*IVGNEN Trigger: GTTCTCATTCCCCACTATCCATGCCATTTGGTCAAG...ACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
||
| 3UTR CAA 72 bp | AGAAGAGCCAATGATACAGGCTACCCAGGACAGGAGTaGCTCAACAAGGCAGCAGTGGCTACAAGAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRANDTGYPGQE*LNKAAVATRAD Trigger: GTCTGCTCTTGTAGCCACTGCTGCCTTGTTGAGCAACTCCTGTCCTGGGTAGCCTGTATCATTGGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTGTTCTGTACCTGGGTaGTTTCTGGCCTTGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEPGSSGRAASVLNLCSVPG*FLALTK Trigger: TTTGGTCAAGGCCAGAAAGCACCCAGGTACAGAACA...GAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACGATGCTGTGAGCCACTaGGAAACCACGTCGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLELKLQTVVNCHVGAGNDAVSH*ETTSEL Trigger: AAGCTCCGACGTGGTTTCCCAGTGGCTCACAGCATC...GTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR TCA 90 bp | TTGCTCAACAAGGCAGCAGTGGCTACAAGAGCAGACAGGAATCCATTCCCTAGCGGTGCTTTCTGGCCTTaGCCAAATGGCATGGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLNKAAVATRADRNPFPSGAFWP*PNGMDS Trigger: ACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACC...GCTAGGGAATGGATTCCTGTCTGCTCTTGTAGCCACTGCTGCCTTGTTGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTGCCAGGCATGGTAGGACACACATTTGATCCTAGCTCTCAAAGAGGCAGAGATGCTGTGAGCCACTaGGAAACCACGTCGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPGMVGHTFDPSSQRGRDAVSH*ETTSEL Trigger: AAGCTCCGACGTGGTTTCCCAGTGGCTCACAGCATC...TCTGCCTCTTTGAGAGCTAGGATCAAATGTGTGTCCTACCATGCCTGGCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS-3UTR CCA 90 bp | ACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGCTTGACCAAATGGCATaGATAGTGGGGAATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TDSCELPCGCWELNQGPLLDQMA*IVGNEN Trigger: GTTCTCATTCCCCACTATCCATGCCATTTGGTCAAG...CAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTCTTGACCAAATGGCATaGATAGTGGGGAATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MWVLGTEPGSSGRAASVLLDQMA*IVGNEN Trigger: GTTCTCATTCCCCACTATCCATGCCATTTGGTCAAG...AAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
||
| 3UTR CAA 72 bp | AGCCATCTCTCCAGCTTCCTGGGTCTCTTAGAGTCTTaGCCAGGCATGGTAGGACACACATTTGATCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLSSFLGLLES*PGMVGHTFDPS Trigger: GCTAGGATCAAATGTGTGTCCTACCATGCCTGGCAAAGACTCTAAGAGACCCAGGAAGCTGGAGAGATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGAACCAGGGTGCTTTCTGGCCTTaGCCAAATGGCATGGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEVTDSCELPCGCWELNQGAFWP*PNGMDS Trigger: ACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACC...CTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGGAACTGCATAGTGAGTaGAACCTGGGTGCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLELKLQTVVNCHVGAGELHSE*NLGAFW Trigger: CCAGAAAGCACCCAGGTTTCACTCACTATGCAGTTC...CCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
||
| CDS-3UTR TCA 90 bp | GACACACATTTGATCCTAGCTCTCAAAGAGGCAGAAGCCAAGCTGATGGACCCTGAACTGCATAGTGAGTaGAACCTGGGTGCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTHLILALKEAEAKLMDPELHSE*NLGAFW Trigger: CCAGAAAGCACCCAGGTTTCACTCACTATGCAGTTC...AGGGTCCATCAGCTTGGCTTCTGCCTCTTTGAGAGCTAGGATCAAATGTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAAGTGTGTCGAGTGTATaGAAAAGAACCTACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGCWELNQGPLEEQPVFLSVSSV*KRTYIL Trigger: GAGGATGTAGGTTCTTTTGCATACACTCGACACACT...TAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
||
| CDS-3UTR TCA 90 bp | CATCTCTCCAGCTTCCTGGGTCTCTTAGAGTCTTTGCCAGGCATGGTAGGACACGGAACTTTCAGCCAGTaGTTAAATGCCTGTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSFLGLLESLPGMVGHGTFSQ*LNACES Trigger: ACTTTCACAGGCATTTAATCACTGGCTGAAAGTTCC...GTGTCCTACCATGCCTGGCAAAGACTCTAAGAGACCCAGGAAGCTGGAGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCTTTGCCAGGCATGGTAGGACACACATTTGATCCTAGCTCTCAAAGAGGCTTCACCGCATCCGGGTaGTCAAGGGTTAAGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESLPGMVGHTFDPSSQRGFTASG*SRVKTF Trigger: AAAAGTCTTAACCCTTGATCACCCGGATGCGGTGAA...GCCTCTTTGAGAGCTAGGATCAAATGTGTGTCCTACCATGCCTGGCAAAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGGTCTCTTAGAGTCTTTGCCAGGCATGGTAGGACACACATTTGATCCTGAACTGCATAGTGAGTaGAACCTGGGTGCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLGLLESLPGMVGHTFDPELHSE*NLGAFW Trigger: CCAGAAAGCACCCAGGTTTCACTCACTATGCAGTTC...AGGATCAAATGTGTGTCCTACCATGCCTGGCAAAGACTCTAAGAGACCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTGAGCCATCTCTCCAGCTTATGCCTGTGAAAGTTTaGTTCTCACCTGTTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLEEQPVFLTSEPSLQLMPVKV*FSPVYL Trigger: CAGGTAAACAGGTGAGAAGCAAACTTTCACAGGCAT...AAGCTGGAGAGATGGCTCAGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCATGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTAACATCTTACTTAAGTaGTTGACTAAAGCCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAMWVLGTEPGSSGRAASNILLK*LTKATS Trigger: ACTAGTGGCTTTAGTCAAGCACTTAAGTAAGATGTT...ACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAATATTCTTCTTCAGTTaGACAAGTGTAGGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGCWELNQGPLEEQPVFLIFFFS*TSVGVP Trigger: AGGGACACCTACACTTGTCCAACTGAAGAAGAATAT...TAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTTCTTACTTAAGTGCTTaGCTAAAGCCACTAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CWELNQGPLEEQPVFLTSSYLSA*LKPLVK Trigger: CTTCACTAGTGGCTTTAGTCAAGCACTTAAGTAAGA...AGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
||
| CDS-3UTR CCA 90 bp | GTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGAACCAGGGTCCTATATTCTTCTTCAGTTaGACAAGTGTAGGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTDSCELPCGCWELNQGPIFFFS*TSVGVP Trigger: AGGGACACCTACACTTGTCCAACTGAAGAAGAATAT...AGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR TCA 90 bp | TCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGGGAACTTTCAGCCAGTaGTTAAATGCCTGTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTEVTDSCELPCGCWELGTFSQ*LNACES Trigger: ACTTTCACAGGCATTTAATCACTGGCTGAAAGTTCC...CAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 |
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| CDS-3UTR TCA 90 bp | CTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACGGAACTTTCAGCCAGTaGTTAAATGCCTGTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLELKLQTVVNCHVGAGNGTFSQ*LNACES Trigger: ACTTTCACAGGCATTTAATCACTGGCTGAAAGTTCC...GTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 |
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| CDS-3UTR GCA 90 bp | GGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGAACATGCCTGTGAAAGTTTaGTTCTCACCTGTTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTEVTDSCELPCGCWELNMPVKV*FSPVYL Trigger: CAGGTAAACAGGTGAGAAGCAAACTTTCACAGGCAT...GTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGATATTCTTCTTCAGTTaGACAAGTGTAGGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGTEVTDSCELPCGCWELIFFFS*TSVGVP Trigger: AGGGACACCTACACTTGTCCAACTGAAGAAGAATAT...CAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR CCA 90 bp | TGCCTGAAAAGTCCAGAAGATGATCTGGAAATGGAGTTACAGGTGTTGGTGAACCTTGACCAAATGGCATaGATAGTGGGGAATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLKSPEDDLEMELQVLVNLDQMA*IVGNEN Trigger: GTTCTCATTCCCCACTATCCATGCCATTTGGTCAAG...GTTCACCAACACCTGTAACTCCATTTCCAGATCATCTTCTGGACTTTTCAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS-3UTR TCA 90 bp | ATGTATGTCTGTGAGATGGTATTAGATCTTCTGGAACTGAAGTTACAGACAGTTGGTGCTTTCTGGCCTTaGCCAAATGGCATGGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: MYVCEMVLDLLELKLQTVGAFWP*PNGMDS Trigger: ACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACC...AACTGTCTGTAACTTCAGTTCCAGAAGATCTAATACCATCTCACAGACATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223329.2 |
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| CDS-3UTR CCA 90 bp | GCCCACTATGTAGCCAATCAGGACCCTCAACTTTTAATCTCTATTTCCCCTAAGAGAATTAATGACAGATaGGACACCATAGATGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHYVANQDPQLLISISPKRINDR*DTIDAV Trigger: CACAGCATCTATGGTGTCCCATCTGTCATTAATTCT...CTTAGGGGAAATAGAGATTAAAAGTTGAGGGTCCTGATTGGCTACATAGTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| CDS-3UTR GCA 90 bp | CCAGGAAGGAAAAGGCTGAAGGAAAATAGTGAGGTCAACAATAGTTTAGACATCATGCCTGTGAAAGTTTaGTTCTCACCTGTTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRKRLKENSEVNNSLDIMPVKV*FSPVYL Trigger: CAGGTAAACAGGTGAGAAGCAAACTTTCACAGGCAT...GATGTCTAAACTATTGTTGACCTCACTATTTTCCTTCAGCCTTTTCCTTCCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170957.3 ENSMUST00000222747.2 |
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| 3UTR CAA 72 bp | TTGACACAGGTCTTCAGAGACAAAACTGAGGTACTCTaGGCATTATCATTTAGGGAAAAACAGCAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTQVFRDKTEVL*ALSFREKQQFF Trigger: AAAGAACTGCTGTTTTTCCCTAAATGATAATGCCAAGAGTACCTCAGTTTTGTCTCTGAAGACCTGTGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| 3UTR CAA 72 bp | GAGAACTTCCCTTCTGTCAAGTCTTCACAGAAACTTTaGTTTTCACTGTATTCTTTGGAGTGTAGATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENFPSVKSSQKL*FSLYSLECRLA Trigger: TGCCAATCTACACTCCAAAGAATACAGTGAAAACAAAAGTTTCTGTGAAGACTTGACAGAAGGGAAGTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223090.2 |
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| CDS-3UTR CCA 90 bp | TTCCCTTCTGTCAAGTCTTCACAGAAACTTTTGTTTTCACTGTATTCTTTGGAGATATTCTTCTTCAGTTaGACAAGTGTAGGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPSVKSSQKLLFSLYSLEIFFFS*TSVGVP Trigger: AGGGACACCTACACTTGTCCAACTGAAGAAGAATAT...CTCCAAAGAATACAGTGAAAACAAAAGTTTCTGTGAAGACTTGACAGAAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223090.2 |
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| CDS-3UTR CAA 90 bp | GGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCGTAAATATCGAGGCCTaGTCCCTGATGAAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCWELNQGPLEEQPVFLTVNIEA*SLMKFQ Trigger: CTGGAACTTCATCAGGGACAAGGCCTCGATATTTAC...GGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR CAA 90 bp | TGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTGTAAATATCGAGGCCTaGTCCCTGATGAAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWELNQGPLEEQPVFLTSVNIEA*SLMKFQ Trigger: CTGGAACTTCATCAGGGACAAGGCCTCGATATTTAC...AGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTGAGGTAAATATCGAGGCCTaGTCCCTGATGAAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WELNQGPLEEQPVFLTSEVNIEA*SLMKFQ Trigger: CTGGAACTTCATCAGGGACAAGGCCTCGATATTTAC...CTCAGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS CCA 90 bp | AGGATGTTCTGTACCTGGGTGCTTTCTGGCCTTGACCAAATGGCATaGATAGTGGGGAATGAGAACTTCCCTTCTGTCAAGTCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RMFCTWVLSGLDQMA*IVGNENFPSVKSSQ Trigger: CTGTGAAGACTTGACAGAAGGGAAGTTCTCATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTACAGAACATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
||
| CDS-3UTR CAA 90 bp | TGGGTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACATGATAATCTGTAGCTaGTCTTCTGGAACTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVLGTEPGSSGRAASVLNMIICS*SSGTFS Trigger: GCTGAAAGTTCCAGAAGACAAGCTACAGATTATCAT...GTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 |
||
| CDS-3UTR CAA 90 bp | GTTACAGACAGTTGTGAACTGCCATGTGGGTGCTGGGAACTGAACCAGGGTCCTAACCACGTCGGAGCTTaGAACTGTCTTCAATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: VTDSCELPCGCWELNQGPNHVGA*NCLQYH Trigger: ATGATATTGAAGACAGTTCAAAGCTCCGACGTGGTT...AGGACCCTGGTTCAGTTCCCAGCACCCACATGGCAGTTCACAACTGTCTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCTGAGCCATCTTATATTCTTCTTCAGTaGGACAAGTGTAGGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LNQGPLEEQPVFLTSEPSYILLQ*DKCRCP Trigger: GGGACACCTACACTTGTCCAACTGAAGAAGAATATA...AGATGGCTCAGAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGAACTGAACCAGGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCTCATCTTACTTAAGTGCTaGACTAAAGCCACTAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLGTEPGSSGRAASVLNLILLKC*TKATSE Trigger: TTCACTAGTGGCTTTAGTCAAGCACTTAAGTAAGAT...GAGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCCTGGTTCAGTTCCCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
||
| CDS CCA 90 bp | ACCACCTGTCTTCTGCAACACCATGGCTTTATATTCTTCTTCAGTTaGACAAGTGTAGGTGTCCCTCCAGTAAATATCGAGGCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTCLLQHHGFIFFFS*TSVGVPPVNIEALS Trigger: GGACAAGGCCTCGATATTTACTGGAGGGACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGACAGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222687.2 ENSMUST00000222747.2 ENSMUST00000223174.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCTTTGCCAGGCATGGTAGGACACACATTTGATCCTAGCTCTCAAAGAGGCTATATTCTTCTTCAGTaGGACAAGTGTAGGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLPGMVGHTFDPSSQRGYILLQ*DKCRCP Trigger: GGGACACCTACACTTGTCCAACTGAAGAAGAATATA...GCCTCTTTGAGAGCTAGGATCAAATGTGTGTCCTACCATGCCTGGCAAAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR CAA 90 bp | TCCAGCTTCCTGGGTCTCTTAGAGTCTTTGCCAGGCATGGTAGGACACACATTTTATATTCTTCTTCAGTaGGACAAGTGTAGGTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SSFLGLLESLPGMVGHTFYILLQ*DKCRCP Trigger: GGGACACCTACACTTGTCCAACTGAAGAAGAATATA...AAATGTGTGTCCTACCATGCCTGGCAAAGACTCTAAGAGACCCAGGAAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS CCA 90 bp | GACCTACTGCTAATCCAAACAAACCACCTGTCTTCTGCAACACCATaGCTTTATATTCTTCTTCAGTTGGACAAGTGTAGGTGTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: DLLLIQTNHLSSATP*LYILLQLDKCRCPS Trigger: GGAGGGACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGACAGGTGGTTTGTTTGGATTAGCAGTAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222687.2 ENSMUST00000222747.2 ENSMUST00000223174.2 |
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| CDS CCA 90 bp | TTAATATCTATATTCTCTGTTCTCTGGCGCAGGATGTTCTGTACCTaGGTGCTTTCTGGCCTTGACCAAATGGCATGGATAGTGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LISIFSVLWRRMFCT*VLSGLDQMAWIVGN Trigger: ATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTACAGAACATCCTGCGCCAGAGAACAGAGAATATAGATATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGTCTCTTAGAGTCTTTGCCAGGCATGGTAGGACACACATTTGATCCTTATATTCTTCTTCAGTaGGACAAGTGTAGGTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: FLGLLESLPGMVGHTFDPYILLQ*DKCRCP Trigger: GGGACACCTACACTTGTCCAACTGAAGAAGAATATA...AGGATCAAATGTGTGTCCTACCATGCCTGGCAAAGACTCTAAGAGACCCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS CCA 90 bp | CTAATCTGTCTTCTGCAACACCATGGCTTTATATTCTTCTTCAGTTaGACAAGTGTAGGTGTCCCTCCAGTAAATATCGAGGCCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LICLLQHHGFIFFFS*TSVGVPPVNIEALS Trigger: GGACAAGGCCTCGATATTTACTGGAGGGACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGACAGATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223090.2 |
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| CDS GCA 90 bp | AGAGTGTGTCGAGTGTATGCAAAAGAACCTACATCCTCCAGGTACTaGACACAATACTTTTTAATATCTATATTCTCTGTTCTCTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RVCRVYAKEPTSSRY*TQYFLISIFSVLWR Trigger: GCGCCAGAGAACAGAGAATATAGATATTAAAAAGTATTGTGTGCAGTACCTGGAGGATGTAGGTTCTTTTGCATACACTCGACACACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS GCA 90 bp | TTTGTAGGCTTTAGCTTCAAGCTCTCTAAGAGTGTGTCGAGTGTATaGAAAAGAACCTACATCCTCCAGGTACTGCACACAATACTTTTT | + |
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Preference number: 5 (lower is better) Translates to: FVGFSFKLSKSVSSV*KRTYILQVLHTILF Trigger: AAAAAGTATTGTGTGCAGTACCTGGAGGATGTAGGTTCTTTTGCATACACTCGACACACTCTTAGAGAGCTTGAAGCTAAAGCCTACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS-3UTR CAA 90 bp | ATGGTATTAGATCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGAACCACGTCGGAGCTTaGAACTGTCTTCAATATCAT | + |
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Preference number: 5 (lower is better) Translates to: MVLDLLELKLQTVVNCHVNHVGA*NCLQYH Trigger: ATGATATTGAAGACAGTTCAAAGCTCCGACGTGGTT...CACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGATCTAATACCAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS-3UTR CAA 90 bp | ATGTATGTCTGTGAGATGGTATTAGATCTTCTGGAACTGAAGTTACAGACAGTTGTAAATATCGAGGCCTaGTCCCTGATGAAGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: MYVCEMVLDLLELKLQTVVNIEA*SLMKFQ Trigger: CTGGAACTTCATCAGGGACAAGGCCTCGATATTTAC...AACTGTCTGTAACTTCAGTTCCAGAAGATCTAATACCATCTCACAGACATACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 |
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| CDS TCA 90 bp | ACTTCAATGATAATCTGTAGCTTGTCTTCTGGAACTTTCAGCCAGTaGTTAAATGCCTGTGAAAGTTTGCTTCTCACCTGTTTACCTGGT | + |
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Preference number: 5 (lower is better) Translates to: TSMIICSLSSGTFSQ*LNACESLLLTCLPG Trigger: ACCAGGTAAACAGGTGAGAAGCAAACTTTCACAGGCATTTAATCACTGGCTGAAAGTTCCAGAAGACAAGCTACAGATTATCATTGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000170957.3 ENSMUST00000221338.2 ENSMUST00000221953.2 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223174.2 |
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| CDS-3UTR CAA 90 bp | GATGGTATTAGATCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTATGATAATCTGTAGCTaGTCTTCTGGAACTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: DGIRSSGTEVTDSCELPCMIICS*SSGTFS Trigger: GCTGAAAGTTCCAGAAGACAAGCTACAGATTATCAT...ACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGATCTAATACCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 |
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| CDS-3UTR CAA 90 bp | ATGGTATTAGATCTTCTGGAACTGAAGTTACAGACAGTTGTGAACTGCCATGTGATGATAATCTGTAGCTaGTCTTCTGGAACTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: MVLDLLELKLQTVVNCHVMIICS*SSGTFS Trigger: GCTGAAAGTTCCAGAAGACAAGCTACAGATTATCAT...CACATGGCAGTTCACAACTGTCTGTAACTTCAGTTCCAGAAGATCTAATACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222747.2 |
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| CDS-3UTR CAA 90 bp | GATAGACAAAATGACTCTAAAAAGGTCCTTAATTCACTATTAAGTACCAGGCCAACCACAGGCCTCAATTaGTTTGTAGGCTTTAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: DRQNDSKKVLNSLLSTRPTTGLN*FVGFSF Trigger: GAAGCTAAAGCCTACAAACAAATTGAGGCCTGTGGT...TGGCCTGGTACTTAATAGTGAATTAAGGACCTTTTTAGAGTCATTTTGTCTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS CCA 72 bp | TGTACCTGGGTGCTTTCTGGCCTTGACCAAATGGCATaGATAGTGGGGAATGAGAACTTCCCTTCTGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: CTWVLSGLDQMA*IVGNENFPSVK Trigger: CTTGACAGAAGGGAAGTTCTCATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS CAA 72 bp | ACAAGTGTAGGTGTCCCTCCAGTAAATATCGAGGCCTaGTCCCTGATGAAGTTCCAGAAGCTGGCGTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: TSVGVPPVNIEA*SLMKFQKLACE Trigger: TTCACACGCCAGCTTCTGGAACTTCATCAGGGACAAGGCCTCGATATTTACTGGAGGGACACCTACACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222687.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223174.2 |
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| CDS CAA 90 bp | TTCAGTTGGACAAGTGTAGGTGTCCCTCCAGTAAATATCGAGGCCTaGTCCCTGATGAAGTTCCAGAAGCTGGCGTGTGAAAAGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FSWTSVGVPPVNIEA*SLMKFQKLACEKLH Trigger: GTGAAGCTTTTCACACGCCAGCTTCTGGAACTTCATCAGGGACAAGGCCTCGATATTTACTGGAGGGACACCTACACTTGTCCAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222687.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223174.2 |
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| CDS CAA 90 bp | AACCACCTGTCTTCTGCAACACCATGGCTTTATATTCTTCTTCAGTaGGACAAGTGTAGGTGTCCCTCCAGTAAATATCGAGGCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: NHLSSATPWLYILLQ*DKCRCPSSKYRGLV Trigger: GACAAGGCCTCGATATTTACTGGAGGGACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGACAGGTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222687.2 ENSMUST00000222747.2 ENSMUST00000223174.2 |
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| CDS GCA 72 bp | TTTAGCTTCAAGCTCTCTAAGAGTGTGTCGAGTGTATaGAAAAGAACCTACATCCTCCAGGTACTGCACACA | + |
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Preference number: 6 (lower is better) Translates to: FSFKLSKSVSSV*KRTYILQVLHT Trigger: TGTGTGCAGTACCTGGAGGATGTAGGTTCTTTTGCATACACTCGACACACTCTTAGAGAGCTTGAAGCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS CCA 72 bp | CTTCTGCAACACCATGGCTTTATATTCTTCTTCAGTTaGACAAGTGTAGGTGTCCCTCCAGTAAATATCGAG | + |
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Preference number: 6 (lower is better) Translates to: LLQHHGFIFFFS*TSVGVPPVNIE Trigger: CTCGATATTTACTGGAGGGACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222687.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223174.2 |
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| CDS CAA 72 bp | TCTTCTGCAACACCATGGCTTTATATTCTTCTTCAGTaGGACAAGTGTAGGTGTCCCTCCAGTAAATATCGA | + |
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Preference number: 6 (lower is better) Translates to: SSATPWLYILLQ*DKCRCPSSKYR Trigger: TCGATATTTACTGGAGGGACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000170957.3 ENSMUST00000222164.2 ENSMUST00000222687.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223174.2 |
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| CDS TCA 72 bp | CACGTCGGAGCTTTGAACTGTCTTCAATATCATCAATaGGTAAACTGGCATTATGCAACATTTCAGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: HVGALNCLQYHQ*VNWHYATFQSL Trigger: AAGTGACTGAAATGTTGCATAATGCCAGTTTACTCATTGATGATATTGAAGACAGTTCAAAGCTCCGACGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000170957.3 ENSMUST00000221338.2 ENSMUST00000221953.2 ENSMUST00000222164.2 ENSMUST00000222747.2 ENSMUST00000223090.2 ENSMUST00000223174.2 |
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| CDS CAA 72 bp | TATTTATTTTCTTCTGTGAACATCTTACTTAAGTGCTaGACTAAAGCCACTAGTGAAGGGTTCCCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: YLFSSVNILLKC*TKATSEGFPPQ Trigger: CTGTGGTGGGAACCCTTCACTAGTGGCTTTAGTCAAGCACTTAAGTAAGATGTTCACAGAAGAAAATAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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| CDS GCA 72 bp | CGAGTGTATGCAAAAGAACCTACATCCTCCAGGTACTaGACACAATACTTTTTAATATCTATATTCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RVYAKEPTSSRY*TQYFLISIFSV Trigger: AACAGAGAATATAGATATTAAAAAGTATTGTGTGCAGTACCTGGAGGATGTAGGTTCTTTTGCATACACTCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170957.3 |
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