RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GGNBP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020530

Ensembl transcript IDs: ENSMUST00000018547.9, ENSMUST00000100686.10, ENSMUST00000108081.9, ENSMUST00000132098.2, ENSMUST00000154915.9, ENSMUST00000168434.8, ENSMUST00000170741.2, ENSMUST00000172405.8

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATCATAGGCAGGCCTGCGCAGCCACGAAACTAAAGACACAAGCCTaGAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAA +
Preference number: 1 (lower is better)
Translates to: NHRQACAATKLKTQA*RKNKRMRLPPPSPK
Trigger: TTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTTAGTTTCGTGGCTGCGCAGGCCTGCCTATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR TCA 90 bp CAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGGCAGTCTaGATCTCTACCCTCATTTGCTCTTCATGCTCTCTCCATCAACAA +
Preference number: 1 (lower is better)
Translates to: QLSSLIKGRIQSWAV*ISTLICSSCSLHQQ
Trigger: TTGTTGATGGAGAGAGCATGAAGAGCAAATGAGGGTAGAGATTCAGACTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR CAA 90 bp CTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTaGGGCAGTCTGAATCTCTACCCTCATTTGCTCTTCATGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LLFSVIKSHQRKNSV*GSLNLYPHLLFMLS
Trigger: AGAGAGCATGAAGAGCAAATGAGGGTAGAGATTCAGACTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR CAA 90 bp CAAAGGAAGAATTCAGTCTTGGGCAGTCTGAATCTCTACCCTCATTaGCTCTTCATGCTCTCTCCATCAACAATGGTTAGATACAAAGTT +
Preference number: 2 (lower is better)
Translates to: QRKNSVLGSLNLYPH*LFMLSPSTMVRYKV
Trigger: AACTTTGTATCTAACCATTGTTGATGGAGAGAGCATGAAGAGCAAATGAGGGTAGAGATTCAGACTGCCCAAGACTGAATTCTTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR-3UTR GCA 90 bp ACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGGCAGTCTGTCCAGATGCTTTaGAAGTGGATGTCTACTGTA +
Preference number: 2 (lower is better)
Translates to: TAFLSYQVSSKEEFSLGQSVQML*KWMSTV
Trigger: TACAGTAGACATCCACTTGCAAAGCATCTGGACAGA...CTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR-3UTR GCA 90 bp ACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGGCAGATCTCTACCCTCATTTaGTCTTCATGCTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: TAFLSYQVSSKEEFSLGQISTLI*SSCSLH
Trigger: ATGGAGAGAGCATGAAGAGCAAATGAGGGTAGAGAT...CTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR-3UTR TCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTCTAAAGACACAAGCCTaGAGAAAGAACAAACGAATG +
Preference number: 2 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGLKTQA*RKNKRM
Trigger: CATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTTAG...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR-3UTR GCA 90 bp ACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTTCTGTCCAGATGCTTTaGAAGTGGATGTCTACTGTA +
Preference number: 2 (lower is better)
Translates to: TRTAFLSYQVSSKEEFSLSVQML*KWMSTV
Trigger: TACAGTAGACATCCACTTGCAAAGCATCTGGACAGA...AAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR-3UTR GCA 90 bp ACAAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCACTCATTTGCTCTTCATaGTCTCTCCATCAACAATGG +
Preference number: 2 (lower is better)
Translates to: TRLELLFSVIKSHQRKNSLICSS*SLHQQW
Trigger: CCATTGTTGATGGAGAGAGCATGAAGAGCAAATGAG...TGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR TCA 72 bp CAGGCCTGCGCAGCCACGAAACTAAAGACACAAGCCTaGAGAAAGAACAAACGAATGAGGTTACCTCCACCG +
Preference number: 3 (lower is better)
Translates to: QACAATKLKTQA*RKNKRMRLPPP
Trigger: CGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTTAGTTTCGTGGCTGCGCAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR-3UTR CAA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAGGCGCAGTAGTCATCTaGAGTGTTTCATTGAAAGAC +
Preference number: 3 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQGAVVI*SVSLKD
Trigger: GTCTTTCAATGAAACACTCAAGATGACTACTGCGCC...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR TCA 72 bp AGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTaGGTAGAAACATGTACACCACATTCTACTATGCGT +
Preference number: 3 (lower is better)
Translates to: SSRVANTKVPPR*VETCTPHSTMR
Trigger: ACGCATAGTAGAATGTGGTGTACATGTTTCTACTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR GCA 72 bp ATTCCTAGACATGATGCCACTTCTTACTCTCCCAGCTaGTCTAACTTTGAGACAAACAAGAATGAGACAATG +
Preference number: 3 (lower is better)
Translates to: IPRHDATSYSPS*SNFETNKNETM
Trigger: CATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGAGTAAGAAGTGGCATCATGTCTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
3UTR-3UTR CAA 90 bp ACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGCGCAGTAGTCATCTaGAGTGTTTCATTGAAAGAC +
Preference number: 3 (lower is better)
Translates to: TRTAFLSYQVSSKEEFSLGAVVI*SVSLKD
Trigger: GTCTTTCAATGAAACACTCAAGATGACTACTGCGCC...AAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCTTCTCTTCGCCCTCCTaGGAACTCTGGCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSFSSPS*ELWLST
Trigger: CGTGCTGAGCCAGAGTTCGCAGGAGGGCGAAGAGAA...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154915.9
ENSMUST00000168434.8
CDS-3UTR GCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCTCGCTCATACCCTCCTaGGAACTCTGGCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSSLIPS*ELWLST
Trigger: CGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGCGA...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAGGTGCAGGCAACATCTaGACCTTCTCGAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQGAGNI*TFSRTC
Trigger: ACAGGTTCTCGAGAAGGTTCAGATGTTGCCTGCACC...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACGGGACCCCAAAAGATTaGCACTGCTCGGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNGTPKD*HCSDRY
Trigger: GTACCTGTCCGAGCAGTGGCAATCTTTTGGGGTCCC...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAACCAAGGCAATGGCTaGCCACCCTTCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNNQGNG*PPFSVL
Trigger: CAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTT...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GACATGATGCCACTTCTTACTCTCCCAGCTGCTCTAACTTTGAGACAAACAAGAAACCAAGGCAATGGCTaGCCACCCTTCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: DMMPLLTLPAALTLRQTRNQGNG*PPFSVL
Trigger: CAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTT...TCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGAGTAAGAAGTGGCATCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGPSCEL*LSTTQE
Trigger: CTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGG...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNVHSVS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAACACTATGCAC...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCACCCTTCTCAGTGCTaGAACAACTCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSHPSQC*NNSQDV
Trigger: CACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTG...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGAACCAAGGCAATGGCTaGCCACCCTTCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGENQGNG*PPFSVL
Trigger: CAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTT...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACTATGTGTCGCTCATGTaGACAGCACCGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNYVSLM*TAPQSF
Trigger: GAAGGATTGCGGTGCTGTCCACATGAGCGACACATA...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIPSCEL*LSTTQE
Trigger: CTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGG...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRAPSCEL*LSTTQE
Trigger: CTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGG...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCCAGACTCTACAAGTTaGGAAAAGAGGCGTTCCACA +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSPDSTS*EKRRST
Trigger: TGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGG...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCGCTCGGACAGGTACATaGTGTGTTTTCACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSARTGT*CVFTGN
Trigger: GTTACCAGTGAAAACACATCATGTACCTGTCCGAGC...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ACTCTCCCAGCTGCTCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCAGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: TLPAALTLRQTRMRQCAPVHSVS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAACACTATGCAC...TGGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR TCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACTTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNLVLSR*NTVCIV
Trigger: CACTATGCACACAGTGTTTCACCGTGACAAGACCAA...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GACATGATGCCACTTCTTACTCTCCCAGCTGCTCTAACTTTGAGACAAACAAGACACCCTTCTCAGTGCTaGAACAACTCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: DMMPLLTLPAALTLRQTRHPSQC*NNSQDV
Trigger: CACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTG...TCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGAGTAAGAAGTGGCATCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR GCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSGTLFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACC...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACTCATCCCTGCATTCCTaGGACATGAGTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNSSLHS*DMSSQT
Trigger: TGTTTGGGAACTCATGTCCCAGGAATGCAGGGATGA...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGACCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRPSCEL*LSTTQE
Trigger: CTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGG...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLPSCEL*LSTTQE
Trigger: CTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGG...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGCTCAAACCAAGGCAATaGCTGCCCACCCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGELKPRQ*LPTLLS
Trigger: ACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAG...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAGTCAAGTTCACCAATaGGGATATTGTATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQSQVHQ*GYCMLG
Trigger: TCCGAGCATACAATATCCTCATTGGTGAACTTGACT...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAACCAAGAGATGTGCAATaGAGTCTGTTTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQPRDVQ*SLFHSK
Trigger: TTTGCTGTGAAACAGACTTCATTGCACATCTCTTGG...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGEVHSVS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAACACTATGCAC...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTCCTAGACATGATGCCACTTCTTACTCTCCCAGCTGCTCTAACTTTGAGACAATTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: FLDMMPLLTLPAALTLRQLVLSR*NTVCIV
Trigger: CACTATGCACACAGTGTTTCACCGTGACAAGACCAA...TTGTCTCAAAGTTAGAGCAGCTGGGAGAGTAAGAAGTGGCATCATGTCTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR GCA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQTTQEM*NEVCFT
Trigger: TGTGAAACAGACTTCATTGCACATCTCTTGGGTCGT...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTTTCTCTTCGCCCTCCTaGGAACTCTGGCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIFSSPS*ELWLST
Trigger: CGTGCTGAGCCAGAGTTCGCAGGAGGGCGAAGAGAA...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018547.9
ENSMUST00000154915.9
ENSMUST00000168434.8
CDS-3UTR GCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGAGCATCTGCCACGTCTaGTCTTCAGCCCGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGESICHV*SSARSF
Trigger: AAAACTACGGGCTGAAGAGCAGACGTGGCAGATGCT...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATTTTGCACATTGCCTTTAACATTCTGTCCAGATGCTTTGCAAGTGGATGTCTAGGGACCCCAAAAGATTaGCACTGCTCGGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: ILHIAFNILSRCFASGCLGTPKD*HCSDRY
Trigger: GTACCTGTCCGAGCAGTGGCAATCTTTTGGGGTCCC...TAGACATCCACTTGCAAAGCATCTGGACAGAATGTTAAAGGCAATGTGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACGGGACCCCAAAAGATTaGCACTGCTCGGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDGTPKD*HCSDRY
Trigger: GTACCTGTCCGAGCAGTGGCAATCTTTTGGGGTCCC...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACACAACTCTCAGGATGTaGATCTTTGGTCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNTTLRM*IFGLVT
Trigger: CGTGACAAGACCAAAGATGCACATCCTGAGAGTTGT...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAACCAAGGCAATGGCTaGCCACCCTTCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDNQGNG*PPFSVL
Trigger: CAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp TACTCTCCCAGCTGCTCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: YSPSCSNFETNKNETMCSGTLFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACC...GGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR GCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGATCGCTCATACCCTCCTaGGAACTCTGGCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRSLIPS*ELWLST
Trigger: CGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGCGA...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGGCAGGAGATAGTACTCCCTTaGGCCCTACTGTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TAFLSYQVSSKEEFSLGQEIVLP*ALLSGV
Trigger: AACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTC...CTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAATCACCATGTTCATCATaGTTACAAATTCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQSPCSS*LQIPSV
Trigger: CACCGAGGGAATTTGTAACCATGATGAACATGGTGA...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TCTCCCAGCTGCTCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCAGGCAGGATGTGCATCTTTaGTCTTGTCACGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: SPSCSNFETNKNETMCSRQDVHL*SCHGET
Trigger: TGTTTCACCGTGACAAGACCAAAGATGCACATCCTG...CCTGGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CCA 90 bp TCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCAGGAGTCACAAAAGCCTCAAACCAAGGCAATaGCTGCCCACCCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SNFETNKNETMCSRSHKSLKPRQ*LPTLLS
Trigger: ACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAG...GCTTTTGTGACTCCTGGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCAGGTTCTGTGAACTGTaGTACGCTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSRFCEL*YAFPML
Trigger: GAGCATAGGAAAAGCGTACCACAGTTCACAGAACCT...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGACTCAAGACTTCGCGTaGTGTTACCACCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGETQDFA*CYHHGN
Trigger: ATTGCCATGGTGGTAACATCACGCGAAGTCTTGAGT...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGACACATGGGACAAGCTaGGAAAGTGCACTCAAGACT +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGETHGTS*ESALKT
Trigger: AGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGT...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGCCAGACTCTACAAGTTaGGAAAAGAGGCGTTCCACA +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGEPDSTS*EKRRST
Trigger: TGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGG...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATGCTCGGACAGGTACATaGTGTGTTTTCACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHARTGT*CVFTGN
Trigger: GTTACCAGTGAAAACACATCATGTACCTGTCCGAGC...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGCAGGCAACATCTaGACCTTCTCGAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: STMVRYKVHEWQILKYHHGAGNI*TFSRTC
Trigger: ACAGGTTCTCGAGAAGGTTCAGATGTTGCCTGCACC...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATCAAACGGGCCTCTTGTaGTCATTTAAGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHQTGLL*SFKRQY
Trigger: ATACTGCCGCTTAAATGATCACAAGAGGCCCGTTTG...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAATTCTCTTCGCCCTCCTaGGAACTCTGGCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKFSSPS*ELWLST
Trigger: CGTGCTGAGCCAGAGTTCGCAGGAGGGCGAAGAGAA...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000018547.9
ENSMUST00000154915.9
ENSMUST00000168434.8
CDS-3UTR GCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTGGGACCCCAAAAGATTaGCACTGCTCGGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIGTPKD*HCSDRY
Trigger: GTACCTGTCCGAGCAGTGGCAATCTTTTGGGGTCCC...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATTCCTAGACATGATGCCACTTCTTACTCTCCCAGCTGCTCTAACTTTGAGACAACAACTCTCAGGATGTaGATCTTTGGTCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: IPRHDATSYSPSCSNFETTTLRM*IFGLVT
Trigger: CGTGACAAGACCAAAGATGCACATCCTGAGAGTTGT...TGTCTCAAAGTTAGAGCAGCTGGGAGAGTAAGAAGTGGCATCATGTCTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR GCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTCACCCTTCTCAGTGCTaGAACAACTCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGHPSQC*NNSQDV
Trigger: CACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTG...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTAACCAAGGCAATGGCTaGCCACCCTTCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFINQGNG*PPFSVL
Trigger: CAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTT...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGEGTLFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACC...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGACGACAACCAACACATaGGACAAGCTGAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGETTTNT*DKLRKC
Trigger: GCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGT...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATACGACAACCAACACATaGGACAAGCTGAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHTTTNT*DKLRKC
Trigger: GCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGT...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTGAGATAGTACTCCCTTaGGCCCTACTGTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIEIVLP*ALLSGV
Trigger: AACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTC...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ATTTTGCACATTGCCTTTAACATTCTGTCCAGATGCTTTGCAAGTGGATGTCTAGAGATAGTACTCCCTTaGGCCCTACTGTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: ILHIAFNILSRCFASGCLEIVLP*ALLSGV
Trigger: AACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTC...TAGACATCCACTTGCAAAGCATCTGGACAGAATGTTAAAGGCAATGTGCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATTCATCCCTGCATTCCTaGGACATGAGTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHSSLHS*DMSSQT
Trigger: TGTTTGGGAACTCATGTCCCAGGAATGCAGGGATGA...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACCTCAAACCAAGGCAATaGCTGCCCACCCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDLKPRQ*LPTLLS
Trigger: ACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAG...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TACTCTCCCAGCTGCTCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCAGGTTCTGTGAACTGTaGTACGCTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: YSPSCSNFETNKNETMCSRFCEL*YAFPML
Trigger: GAGCATAGGAAAAGCGTACCACAGTTCACAGAACCT...GGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CCA 90 bp TTCCTAGACATGATGCCACTTCTTACTCTCCCAGCTGCTCTAACTTTGAGACAAGTTCAACTAAGCTCTTaGCACCTTTTCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FLDMMPLLTLPAALTLRQVQLSS*HLFQSQ
Trigger: CTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAAC...TTGTCTCAAAGTTAGAGCAGCTGGGAGAGTAAGAAGTGGCATCATGTCTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR TCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTGGTGCAGGCAACATCTaGACCTTCTCGAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIGAGNI*TFSRTC
Trigger: ACAGGTTCTCGAGAAGGTTCAGATGTTGCCTGCACC...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIVHSVS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAACACTATGCAC...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTTTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGLVLSR*NTVCIV
Trigger: CACTATGCACACAGTGTTTCACCGTGACAAGACCAA...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTAGCATCTGCCACGTCTaGTCTTCAGCCCGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRASICHV*SSARSF
Trigger: AAAACTACGGGCTGAAGAGCAGACGTGGCAGATGCT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTAGCATCTGCCACGTCTaGTCTTCAGCCCGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAISICHV*SSARSF
Trigger: AAAACTACGGGCTGAAGAGCAGACGTGGCAGATGCT...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTAGCATCTGCCACGTCTaGTCTTCAGCCCGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFSICHV*SSARSF
Trigger: AAAACTACGGGCTGAAGAGCAGACGTGGCAGATGCT...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATAAGCGGCTAATACCCTaGACTTTTTCCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHKRLIP*TFSTVI
Trigger: GATGACTGTGGAAAAAGTGCAGGGTATTAGCCGCTT...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGGGACCCCAAAAGATTaGCACTGCTCGGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: TRLELLFSVIKSHQRKNSGTPKD*HCSDRY
Trigger: GTACCTGTCCGAGCAGTGGCAATCTTTTGGGGTCCC...TGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTCACCCTTCTCAGTGCTaGAACAACTCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIHPSQC*NNSQDV
Trigger: CACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTG...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTCACCCTTCTCAGTGCTaGAACAACTCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRAHPSQC*NNSQDV
Trigger: CACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTG...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGAGATAGTACTCCCTTaGGCCCTACTGTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDREIVLP*ALLSGV
Trigger: AACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTC...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTCCATCCAACATCCTCTaGCTGTTCCCTGGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSPSNIL*LFPGKV
Trigger: GACCTTTCCAGGGAACAGCCAGAGGATGTTGGATGG...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGACTCAAACCAAGGCAATaGCTGCCCACCCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRLKPRQ*LPTLLS
Trigger: ACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAG...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTACTCAAGACTTCGCGTaGTGTTACCACCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRATQDFA*CYHHGN
Trigger: ATTGCCATGGTGGTAACATCACGCGAAGTCTTGAGT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACACTCAAGACTTCGCGTaGTGTTACCACCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDTQDFA*CYHHGN
Trigger: ATTGCCATGGTGGTAACATCACGCGAAGTCTTGAGT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTACACATGGGACAAGCTaGGAAAGTGCACTCAAGACT +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRATHGTS*ESALKT
Trigger: AGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGAGTCAAGTTCACCAATaGGGATATTGTATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGESQVHQ*GYCMLG
Trigger: TCCGAGCATACAATATCCTCATTGGTGAACTTGACT...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATCCAAGAGATGTGCAATaGAGTCTGTTTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHPRDVQ*SLFHSK
Trigger: TTTGCTGTGAAACAGACTTCATTGCACATCTCTTGG...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTGCTCGGACAGGTACATaGTGTGTTTTCACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFARTGT*CVFTGN
Trigger: GTTACCAGTGAAAACACATCATGTACCTGTCCGAGC...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGGGTGCAGGCAACATCTaGACCTTCTCGAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLGAGNI*TFSRTC
Trigger: ACAGGTTCTCGAGAAGGTTCAGATGTTGCCTGCACC...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGTGCAGGCAACATCTaGACCTTCTCGAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: TRTAFLSYQVSSKEEFSLGAGNI*TFSRTC
Trigger: ACAGGTTCTCGAGAAGGTTCAGATGTTGCCTGCACC...AAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTTTGTCTTCACAGTGGTaGACACAGGAATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGLSSQW*TQESSP
Trigger: TGGTGAAGATTCCTGTGTTCACCACTGTGAAGACAA...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRVHSVS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAACACTATGCAC...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAILVLSR*NTVCIV
Trigger: CACTATGCACACAGTGTTTCACCGTGACAAGACCAA...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACTTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: STMVRYKVHEWQILKYHHLVLSR*NTVCIV
Trigger: CACTATGCACACAGTGTTTCACCGTGACAAGACCAA...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTCAAACGGGCCTCTTGTaGTCATTTAAGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFQTGLL*SFKRQY
Trigger: ATACTGCCGCTTAAATGATCACAAGAGGCCCGTTTG...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACCAAACGGGCCTCTTGTaGTCATTTAAGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: STMVRYKVHEWQILKYHHQTGLL*SFKRQY
Trigger: ATACTGCCGCTTAAATGATCACAAGAGGCCCGTTTG...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACTCAGTGCAAAACCTGTaGTTTCGAAGATATGTTTCT +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNSVQNL*FRRYVS
Trigger: AGAAACATATCTTCGAAAGCACAGGTTTTGCACTGA...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACGGAGGACTTTATTTTTaGAATCAGTGCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNGGLYF*NQCKTC
Trigger: ACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCC...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTAGCATCTGCCACGTCTaGTCTTCAGCCCGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFISICHV*SSARSF
Trigger: AAAACTACGGGCTGAAGAGCAGACGTGGCAGATGCT...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTCCAAAAGATTGCCACTaGTCGGACAGGTACATGATG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIPKDCH*SDRYMM
Trigger: CATCATGTACCTGTCCGAGCAGTGGCAATCTTTTGG...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACCCAAAAGATTGCCACTaGTCGGACAGGTACATGATG +
Preference number: 4 (lower is better)
Translates to: STMVRYKVHEWQILKYHHPKDCH*SDRYMM
Trigger: CATCATGTACCTGTCCGAGCAGTGGCAATCTTTTGG...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATTTTGCACATTGCCTTTAACATTCTGTCCAGATGCTTTGCAAGTGGATGTCTACCAAAAGATTGCCACTaGTCGGACAGGTACATGATG +
Preference number: 4 (lower is better)
Translates to: ILHIAFNILSRCFASGCLPKDCH*SDRYMM
Trigger: CATCATGTACCTGTCCGAGCAGTGGCAATCTTTTGG...TAGACATCCACTTGCAAAGCATCTGGACAGAATGTTAAAGGCAATGTGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTACAACTCTCAGGATGTaGATCTTTGGTCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGTTLRM*IFGLVT
Trigger: CGTGACAAGACCAAAGATGCACATCCTGAGAGTTGT...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGACACCCTTCTCAGTGCTaGAACAACTCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRHPSQC*NNSQDV
Trigger: CACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTG...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDGTLFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACC...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTACGACAACCAACACATaGGACAAGCTGAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAITTTNT*DKLRKC
Trigger: GCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGT...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTACGACAACCAACACATaGGACAAGCTGAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRATTTNT*DKLRKC
Trigger: GCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGGAGATAGTACTCCCTTaGGCCCTACTGTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLEIVLP*ALLSGV
Trigger: AACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTC...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTCATCCCTGCATTCCTaGGACATGAGTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAISSLHS*DMSSQT
Trigger: TGTTTGGGAACTCATGTCCCAGGAATGCAGGGATGA...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGTCACCATGTTCATCATaGTTACAAATTCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGESPCSS*LQIPSV
Trigger: CACCGAGGGAATTTGTAACCATGATGAACATGGTGA...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCAGGAGTCACAAAAGCGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SNFETNKNETMCSRSHKSGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...GCTTTTGTGACTCCTGGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTCAGGATGTGCATCTTTaGTCTTGTCACGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGQDVHL*SCHGET
Trigger: TGTTTCACCGTGACAAGACCAAAGATGCACATCCTG...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAACTCAAACCAAGGCAATaGCTGCCCACCCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKLKPRQ*LPTLLS
Trigger: ACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAG...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR CAA 72 bp TCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTaGGGCAGTCTGAATCTCTACCCTCATTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SVIKSHQRKNSV*GSLNLYPHLLF
Trigger: GAAGAGCAAATGAGGGTAGAGATTCAGACTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTACTCAAGACTTCGCGTaGTGTTACCACCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSTQDFA*CYHHGN
Trigger: ATTGCCATGGTGGTAACATCACGCGAAGTCTTGAGT...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGACTCAAGACTTCGCGTaGTGTTACCACCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLTQDFA*CYHHGN
Trigger: ATTGCCATGGTGGTAACATCACGCGAAGTCTTGAGT...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTACACATGGGACAAGCTaGGAAAGTGCACTCAAGACT +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFITHGTS*ESALKT
Trigger: AGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGT...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGACACATGGGACAAGCTaGGAAAGTGCACTCAAGACT +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLTHGTS*ESALKT
Trigger: AGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGT...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTCCAGACTCTACAAGTTaGGAAAAGAGGCGTTCCACA +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIPDSTS*EKRRST
Trigger: TGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGG...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTCCAGACTCTACAAGTTaGGAAAAGAGGCGTTCCACA +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSPDSTS*EKRRST
Trigger: TGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGG...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTGCTCGGACAGGTACATaGTGTGTTTTCACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIARTGT*CVFTGN
Trigger: GTTACCAGTGAAAACACATCATGTACCTGTCCGAGC...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTCGGACAGGTACATaGTGTGTTTTCACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRARTGT*CVFTGN
Trigger: GTTACCAGTGAAAACACATCATGTACCTGTCCGAGC...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTCCTTCCATGCTAGATaGATATCCACAGTCACTACC +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAISFHAR*ISTVTT
Trigger: GGTAGTGACTGTGGATATTCATCTAGCATGGAAGGA...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTTCCTTCCATGCTAGATaGATATCCACAGTCACTACC +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFSFHAR*ISTVTT
Trigger: GGTAGTGACTGTGGATATTCATCTAGCATGGAAGGA...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACTTGTCTTCACAGTGGTaGACACAGGAATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDLSSQW*TQESSP
Trigger: TGGTGAAGATTCCTGTGTTCACCACTGTGAAGACAA...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKVHSVS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAACACTATGCAC...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGTTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLLVLSR*NTVCIV
Trigger: CACTATGCACACAGTGTTTCACCGTGACAAGACCAA...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGCAAACGGGCCTCTTGTaGTCATTTAAGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLQTGLL*SFKRQY
Trigger: ATACTGCCGCTTAAATGATCACAAGAGGCCCGTTTG...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGTAGCCCTTCTCTTTaGTGCAGTCAAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDSSPSL*CSQVHQ
Trigger: TTGGTGAACTTGACTGCAGCAAAGAGAAGGGCTACT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTAGTAGCCCTTCTCTTTaGTGCAGTCAAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAISSPSL*CSQVHQ
Trigger: TTGGTGAACTTGACTGCAGCAAAGAGAAGGGCTACT...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGGCAGACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: TAFLSYQVSSKEEFSLGQTTQEM*NEVCFT
Trigger: TGTGAAACAGACTTCATTGCACATCTCTTGGGTCGT...CTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAAGCGGCTAATACCCTaGACTTTTTCCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDKRLIP*TFSTVI
Trigger: GATGACTGTGGAAAAAGTGCAGGGTATTAGCCGCTT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTCCAAAAGATTGCCACTaGTCGGACAGGTACATGATG +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIPKDCH*SDRYMM
Trigger: CATCATGTACCTGTCCGAGCAGTGGCAATCTTTTGG...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGCCAAAAGATTGCCACTaGTCGGACAGGTACATGATG +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLPKDCH*SDRYMM
Trigger: CATCATGTACCTGTCCGAGCAGTGGCAATCTTTTGG...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTACAACTCTCAGGATGTaGATCTTTGGTCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRATTLRM*IFGLVT
Trigger: CGTGACAAGACCAAAGATGCACATCCTGAGAGTTGT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSGTLFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACC...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACGGTATTGTTCTCTATTaGTGTAGAAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNGIVLY*CRKTGY
Trigger: ATAACCAGTCTTTCTACAGCAATAGAGAACAATACC...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAGACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCGTGATGTTACCACCATaGCAATACTTAAATCTTGTT +
Preference number: 4 (lower is better)
Translates to: KDTSLKKEQTNEVTSTVSVMLPP*QYLNLV
Trigger: AACAAGATTTAAGTATTGCCATGGTGGTAACATCAC...GGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAATATGTGTCGCTCATGTaGACAGCACCGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKYVSLM*TAPQSF
Trigger: GAAGGATTGCGGTGCTGTCCACATGAGCGACACATA...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTTATGTGTCGCTCATGTaGACAGCACCGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: TRTAFLSYQVSSKEEFSLYVSLM*TAPQSF
Trigger: GAAGGATTGCGGTGCTGTCCACATGAGCGACACATA...AAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TACTCTCCCAGCTGCTCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCCAGCTTCCAAGTTTTTaGATATGTTCATCGCATTTC +
Preference number: 4 (lower is better)
Translates to: YSPSCSNFETNKNETMCSQLPSF*ICSSHF
Trigger: GAAATGCGATGAACATATCCAAAAACTTGGAAGCTG...GGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRAGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTCAGGATGTGCATCTTTaGTCTTGTCACGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRAQDVHL*SCHGET
Trigger: TGTTTCACCGTGACAAGACCAAAGATGCACATCCTG...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTGTTCAACTAAGCTCTTaGCACCTTTTCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIVQLSS*HLFQSQ
Trigger: CTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAAC...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGTTCAACTAAGCTCTTaGCACCTTTTCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: STMVRYKVHEWQILKYHHVQLSS*HLFQSQ
Trigger: CTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAAC...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACGTTCAACTAAGCTCTTaGCACCTTTTCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDVQLSS*HLFQSQ
Trigger: CTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAAC...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGTGTGCACCATTATTCTaGTGCCCATCAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGECAPLF*CPSRFK
Trigger: TTTAAATCTTGATGGGCATCAGAATAATGGTGCACA...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAACCAGACTCTACAAGTTaGGAAAAGAGGCGTTCCACA +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKPDSTS*EKRRST
Trigger: TGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGG...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTAGTCAAGTTCACCAATaGGGATATTGTATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRASQVHQ*GYCMLG
Trigger: TCCGAGCATACAATATCCTCATTGGTGAACTTGACT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATTTTGCACATTGCCTTTAACATTCTGTCCAGATGCTTTGCAAGTGGATGTCTAAGTCAAGTTCACCAATaGGGATATTGTATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: ILHIAFNILSRCFASGCLSQVHQ*GYCMLG
Trigger: TCCGAGCATACAATATCCTCATTGGTGAACTTGACT...TAGACATCCACTTGCAAAGCATCTGGACAGAATGTTAAAGGCAATGTGCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTAGTCAAGTTCACCAATaGGGATATTGTATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAISQVHQ*GYCMLG
Trigger: TCCGAGCATACAATATCCTCATTGGTGAACTTGACT...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTCCAAGAGATGTGCAATaGAGTCTGTTTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFPRDVQ*SLFHSK
Trigger: TTTGCTGTGAAACAGACTTCATTGCACATCTCTTGG...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGTCCTTCCATGCTAGATaGATATCCACAGTCACTACC +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLSFHAR*ISTVTT
Trigger: GGTAGTGACTGTGGATATTCATCTAGCATGGAAGGA...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTTCCTTCCATGCTAGATaGATATCCACAGTCACTACC +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSSFHAR*ISTVTT
Trigger: GGTAGTGACTGTGGATATTCATCTAGCATGGAAGGA...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATAAAGATTTCCTCATCTaGAGTACATTCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHKDFLI*STFRLI
Trigger: GATGAGTCTGAATGTACTTCAGATGAGGAAATCTTT...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAACAAACGGGCCTCTTGTaGTCATTTAAGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKQTGLL*SFKRQY
Trigger: ATACTGCCGCTTAAATGATCACAAGAGGCCCGTTTG...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTAGTAGCCCTTCTCTTTaGTGCAGTCAAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFISSPSL*CSQVHQ
Trigger: TTGGTGAACTTGACTGCAGCAAAGAGAAGGGCTACT...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAITTQEM*NEVCFT
Trigger: TGTGAAACAGACTTCATTGCACATCTCTTGGGTCGT...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: STMVRYKVHEWQILKYHHTTQEM*NEVCFT
Trigger: TGTGAAACAGACTTCATTGCACATCTCTTGGGTCGT...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAAAGCGGCTAATACCCTaGACTTTTTCCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRKRLIP*TFSTVI
Trigger: GATGACTGTGGAAAAAGTGCAGGGTATTAGCCGCTT...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTACAACTCTCAGGATGTaGATCTTTGGTCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSTTLRM*IFGLVT
Trigger: CGTGACAAGACCAAAGATGCACATCCTGAGAGTTGT...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLGTLFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACC...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGAATTTCTCCTTCAGATaGTGTCGGTATTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: MVRYKVHEWQILKYHHGENFSFR*CRYCSL
Trigger: TAGAGAACAATACCGACAGCATCTGAAGGAGAAATT...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTGCTGTCCTTCCTGTaGTCTTCACTACTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAILLSFL*SSLLLL
Trigger: TAAGAGAAGTAGTGAAGACCACAGGAAGGACAGCAA...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS-3UTR CCA 90 bp AAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTTCATCCCTGCATTCCTaGGACATGAGTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: KTRTAFLSYQVSSKEEFSSSLHS*DMSSQT
Trigger: TGTTTGGGAACTCATGTCCCAGGAATGCAGGGATGA...ACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTCACCATGTTCATCATaGTTACAAATTCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAISPCSS*LQIPSV
Trigger: CACCGAGGGAATTTGTAACCATGATGAACATGGTGA...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACTCACCATGTTCATCATaGTTACAAATTCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: STMVRYKVHEWQILKYHHSPCSS*LQIPSV
Trigger: CACCGAGGGAATTTGTAACCATGATGAACATGGTGA...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTTCACCATGTTCATCATaGTTACAAATTCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRASPCSS*LQIPSV
Trigger: CACCGAGGGAATTTGTAACCATGATGAACATGGTGA...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATCAGCTTCCAAGTTTTTaGATATGTTCATCGCATTTC +
Preference number: 4 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHQLPSF*ICSSHF
Trigger: GAAATGCGATGAACATATCCAAAAACTTGGAAGCTG...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTCAGGATGTGCATCTTTaGTCTTGTCACGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSQDVHL*SCHGET
Trigger: TGTTTCACCGTGACAAGACCAAAGATGCACATCCTG...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGACAGGATGTGCATCTTTaGTCTTGTCACGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRQDVHL*SCHGET
Trigger: TGTTTCACCGTGACAAGACCAAAGATGCACATCCTG...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAAGGTTCTGTGAACTGTaGTACGCTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRRFCEL*YAFPML
Trigger: GAGCATAGGAAAAGCGTACCACAGTTCACAGAACCT...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGTTCAACTAAGCTCTTaGCACCTTTTCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRVQLSS*HLFQSQ
Trigger: CTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAAC...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGTCCATAATGGAAAATaGTCCTACACTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRVHNGK*SYTCCP
Trigger: AGGACAGCAAGTGTAGGATCATTTTCCATTATGGAC...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS-3UTR TCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGACCAAGAGATGTGCAATaGAGTCTGTTTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRPRDVQ*SLFHSK
Trigger: TTTGCTGTGAAACAGACTTCATTGCACATCTCTTGG...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTAACTCGTTCTTCCTCTaGAAATTCCTCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRANSFFL*KFLTKL
Trigger: CAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTAACTCGTTCTTCCTCTaGAAATTCCTCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAINSFFL*KFLTKL
Trigger: CAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTT...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAATTGTCTTCACAGTGGTaGACACAGGAATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKLSSQW*TQESSP
Trigger: TGGTGAAGATTCCTGTGTTCACCACTGTGAAGACAA...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGTTGTCTTCACAGTGGTaGACACAGGAATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLLSSQW*TQESSP
Trigger: TGGTGAAGATTCCTGTGTTCACCACTGTGAAGACAA...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTTCAGTGCAAAACCTGTaGTTTCGAAGATATGTTTCT +
Preference number: 4 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGSVQNL*FRRYVS
Trigger: AGAAACATATCTTCGAAAGCACAGGTTTTGCACTGA...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAGTAGCCCTTCTCTTTaGTGCAGTCAAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLSSPSL*CSQVHQ
Trigger: TTGGTGAACTTGACTGCAGCAAAGAGAAGGGCTACT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAGCGGCTAATACCCTaGACTTTTTCCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLKRLIP*TFSTVI
Trigger: GATGACTGTGGAAAAAGTGCAGGGTATTAGCCGCTT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTAAGCGGCTAATACCCTaGACTTTTTCCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: TRTAFLSYQVSSKEEFSLKRLIP*TFSTVI
Trigger: GATGACTGTGGAAAAAGTGCAGGGTATTAGCCGCTT...AAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGACAACTCTCAGGATGTaGATCTTTGGTCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLTTLRM*IFGLVT
Trigger: CGTGACAAGACCAAAGATGCACATCCTGAGAGTTGT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGGCAGCAGCTTCCAAGTTTTTaGATATGTTCATCGCATTTC +
Preference number: 4 (lower is better)
Translates to: TAFLSYQVSSKEEFSLGQQLPSF*ICSSHF
Trigger: GAAATGCGATGAACATATCCAAAAACTTGGAAGCTG...CTGCCCAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ACAAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCACAGGATGTGCATCTTTaGTCTTGTCACGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: TRLELLFSVIKSHQRKNSQDVHL*SCHGET
Trigger: TGTTTCACCGTGACAAGACCAAAGATGCACATCCTG...TGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAGGTTCTGTGAACTGTaGTACGCTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLRFCEL*YAFPML
Trigger: GAGCATAGGAAAAGCGTACCACAGTTCACAGAACCT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAAGGTTCTGTGAACTGTaGTACGCTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKRFCEL*YAFPML
Trigger: GAGCATAGGAAAAGCGTACCACAGTTCACAGAACCT...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ACAAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAAGGTTCTGTGAACTGTaGTACGCTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: TRLELLFSVIKSHQRKNSRFCEL*YAFPML
Trigger: GAGCATAGGAAAAGCGTACCACAGTTCACAGAACCT...TGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGGTTCAACTAAGCTCTTaGCACCTTTTCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLVQLSS*HLFQSQ
Trigger: CTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAAC...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
3UTR CAA 72 bp TTTTGCACATTGCCTTTAACATTCTGTCCAGATGCTTaGCAAGTGGATGTCTACTGTAAACCATATATCCAG +
Preference number: 4 (lower is better)
Translates to: FCTLPLTFCPDA*QVDVYCKPYIQ
Trigger: CTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCATCTGGACAGAATGTTAAAGGCAATGTGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTGTGCACCATTATTCTaGTGCCCATCAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAICAPLF*CPSRFK
Trigger: TTTAAATCTTGATGGGCATCAGAATAATGGTGCACA...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACTGTGCACCATTATTCTaGTGCCCATCAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDCAPLF*CPSRFK
Trigger: TTTAAATCTTGATGGGCATCAGAATAATGGTGCACA...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTTGTGCACCATTATTCTaGTGCCCATCAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRACAPLF*CPSRFK
Trigger: TTTAAATCTTGATGGGCATCAGAATAATGGTGCACA...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp CTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGAACTCGTTCTTCCTCTaGAAATTCCTCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LELLFSVIKSHQRKNSVLNSFFL*KFLTKL
Trigger: CAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTT...CAAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAAAGATTTCCTCATCTaGAGTACATTCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDKDFLI*STFRLI
Trigger: GATGAGTCTGAATGTACTTCAGATGAGGAAATCTTT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTAAAGATTTCCTCATCTaGAGTACATTCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFKDFLI*STFRLI
Trigger: GATGAGTCTGAATGTACTTCAGATGAGGAAATCTTT...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTAAAGATTTCCTCATCTaGAGTACATTCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: FKREGAVVILSVSLKDRAKDFLI*STFRLI
Trigger: GATGAGTCTGAATGTACTTCAGATGAGGAAATCTTT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTCAGTGCAAAACCTGTaGTTTCGAAGATATGTTTCT +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAISVQNL*FRRYVS
Trigger: AGAAACATATCTTCGAAAGCACAGGTTTTGCACTGA...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTGGAGGACTTTATTTTTaGAATCAGTGCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIGGLYF*NQCKTC
Trigger: ACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCC...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTGGAGGACTTTATTTTTaGAATCAGTGCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFGGLYF*NQCKTC
Trigger: ACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCC...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: KTRTAFLSYQVSSKEEFSTTQEM*NEVCFT
Trigger: TGTGAAACAGACTTCATTGCACATCTCTTGGGTCGT...ACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACCAGCTTCCAAGTTTTTaGATATGTTCATCGCATTTC +
Preference number: 4 (lower is better)
Translates to: GVFKREGAVVILSVSLKDQLPSF*ICSSHF
Trigger: GAAATGCGATGAACATATCCAAAAACTTGGAAGCTG...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTCAGCTTCCAAGTTTTTaGATATGTTCATCGCATTTC +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFQLPSF*ICSSHF
Trigger: GAAATGCGATGAACATATCCAAAAACTTGGAAGCTG...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGATGTGCACCATTATTCTaGTGCCCATCAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRCAPLF*CPSRFK
Trigger: TTTAAATCTTGATGGGCATCAGAATAATGGTGCACA...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp TTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAAACTCGTTCTTCCTCTaGAAATTCCTCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LGVFKREGAVVILSVSLKNSFFL*KFLTKL
Trigger: CAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTT...TTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTTCAGTGCAAAACCTGTaGTTTCGAAGATATGTTTCT +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSSVQNL*FRRYVS
Trigger: AGAAACATATCTTCGAAAGCACAGGTTTTGCACTGA...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGGAGGACTTTATTTTTaGAATCAGTGCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSGGLYF*NQCKTC
Trigger: ACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCC...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTGGTATTGTTCTCTATTaGTGTAGAAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIGIVLY*CRKTGY
Trigger: ATAACCAGTCTTTCTACAGCAATAGAGAACAATACC...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTAATTTCTCCTTCAGATaGTGTCGGTATTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSNFSFR*CRYCSL
Trigger: TAGAGAACAATACCGACAGCATCTGAAGGAGAAATT...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAAATTTCTCCTTCAGATaGTGTCGGTATTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRNFSFR*CRYCSL
Trigger: TAGAGAACAATACCGACAGCATCTGAAGGAGAAATT...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTGTGATGTTACCACCATaGCAATACTTAAATCTTGTT +
Preference number: 4 (lower is better)
Translates to: KREGAVVILSVSLKDRAIVMLPP*QYLNLV
Trigger: AACAAGATTTAAGTATTGCCATGGTGGTAACATCAC...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ATGCTTTGCAAGTGGATGTCTACTGTAAACCATATATCCAGCTCACTGTCATTTGTGATGTTACCACCATaGCAATACTTAAATCTTGTT +
Preference number: 4 (lower is better)
Translates to: MLCKWMSTVNHISSSLSFVMLPP*QYLNLV
Trigger: AACAAGATTTAAGTATTGCCATGGTGGTAACATCAC...AAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp ATTTTGCACATTGCCTTTAACATTCTGTCCAGATGCTTTGCAAGTGGATGTCTAGTGATGTTACCACCATaGCAATACTTAAATCTTGTT +
Preference number: 4 (lower is better)
Translates to: ILHIAFNILSRCFASGCLVMLPP*QYLNLV
Trigger: AACAAGATTTAAGTATTGCCATGGTGGTAACATCAC...TAGACATCCACTTGCAAAGCATCTGGACAGAATGTTAAAGGCAATGTGCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTCAGCTTCCAAGTTTTTaGATATGTTCATCGCATTTC +
Preference number: 4 (lower is better)
Translates to: RRRSSHLECFIERQSYFIQLPSF*ICSSHF
Trigger: GAAATGCGATGAACATATCCAAAAACTTGGAAGCTG...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR TCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGATTTCCTCATCTaGAGTACATTCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLKDFLI*STFRLI
Trigger: GATGAGTCTGAATGTACTTCAGATGAGGAAATCTTT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGTCAGTGCAAAACCTGTaGTTTCGAAGATATGTTTCT +
Preference number: 4 (lower is better)
Translates to: KLGVFKREGAVVILSVSLSVQNL*FRRYVS
Trigger: AGAAACATATCTTCGAAAGCACAGGTTTTGCACTGA...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTGGAGGACTTTATTTTTaGAATCAGTGCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: KTRTAFLSYQVSSKEEFSGGLYF*NQCKTC
Trigger: ACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCC...ACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGGTATTGTTCTCTATTaGTGTAGAAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: EVTKLGVFKREGAVVILSGIVLY*CRKTGY
Trigger: ATAACCAGTCTTTCTACAGCAATAGAGAACAATACC...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp AAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTAATTTCTCCTTCAGATaGTGTCGGTATTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KTRTAFLSYQVSSKEEFSNFSFR*CRYCSL
Trigger: TAGAGAACAATACCGACAGCATCTGAAGGAGAAATT...ACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CCA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGTGATGTTACCACCATaGCAATACTTAAATCTTGTT +
Preference number: 4 (lower is better)
Translates to: VFKREGAVVILSVSLKDRVMLPP*QYLNLV
Trigger: AACAAGATTTAAGTATTGCCATGGTGGTAACATCAC...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR GCA 90 bp ACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTGGTATTGTTCTCTATTaGTGTAGAAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TRTAFLSYQVSSKEEFSLGIVLY*CRKTGY
Trigger: ATAACCAGTCTTTCTACAGCAATAGAGAACAATACC...AAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp TCTCGCCATCTTCAGCACTGCCACAGGCGTTGCAGCTGTTTTCAATaGAGTCTGTTTCCTTCTCTCGGCTCACTGCTTTCTCGTCTGCGG +
Preference number: 5 (lower is better)
Translates to: SRHLQHCHRRCSCFQ*SLFPSLGSLLSRLR
Trigger: CCGCAGACGAGAAAGCAGTGAGCCGAGAGAAGGAAACAGACTTCATTGAAAACAGCTGCAACGCCTGTGGCAGTGCTGAAGATGGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp GCCCTCCTGCGAACTCTGGCTCAGCACGACCCAAGAGATGTGCAATaGAGTCTGTTTCACAGCAAACATGTATGTGTCGCTCATGTGGAC +
Preference number: 5 (lower is better)
Translates to: ALLRTLAQHDPRDVQ*SLFHSKHVCVAHVD
Trigger: GTCCACATGAGCGACACATACATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000154915.9
ENSMUST00000168434.8
CDS TCA 90 bp AAGAGGCGTTCCACACTTCGACGACAACCAACACATGGGACAAGCTaGGAAAGTGCACTCAAGACTTCGCGTGATGTTACCACCATGGCA +
Preference number: 5 (lower is better)
Translates to: KRRSTLRRQPTHGTS*ESALKTSRDVTTMA
Trigger: TGCCATGGTGGTAACATCACGCGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGTCGAAGTGTGGAACGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp CCTACTGTCAGGGGTTCAAGGGCAGGATTTCCAGACTCTACAAGTTaGGAAAAGAGGCGTTCCACACTTCGACGACAACCAACACATGGG +
Preference number: 5 (lower is better)
Translates to: PTVRGSRAGFPDSTS*EKRRSTLRRQPTHG
Trigger: CCCATGTGTTGGTTGTCGTCGAAGTGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCTGACAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp ACCCTCCTGCGAACTCTGGCTCAGCACGACCCAAGAGATGTGCAATaGAGTCTGTTTCACAGCAAACATGTATGTGTCGCTCATGTGGAC +
Preference number: 5 (lower is better)
Translates to: TLLRTLAQHDPRDVQ*SLFHSKHVCVAHVD
Trigger: GTCCACATGAGCGACACATACATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS GCA 90 bp TCTTCGCCCTCCTGCGAACTCTGGCTCAGCACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACAGCAAACATGTATGTGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: SSPSCELWLSTTQEM*NEVCFTANMYVSLM
Trigger: CATGAGCGACACATACATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGCGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000154915.9
ENSMUST00000168434.8
CDS GCA 90 bp GTGAACTGTGGTACGCTTTTCCTATGCTCAAACCAAGGCAATGGCTaGCCACCCTTCTCAGTGCTGCAACAACTCTCAGGATGTGCATCT +
Preference number: 5 (lower is better)
Translates to: VNCGTLFLCSNQGNG*PPFSVLQQLSGCAS
Trigger: AGATGCACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACCACAGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 90 bp TTTTTGCATCAGTCATGCAGCTCCGAGTCAGAGATAGTACTCCCTTaGGCCCTACTGTCAGGGGTTCAAGGGCAGGATTTCCAGACTCTA +
Preference number: 5 (lower is better)
Translates to: FLHQSCSSESEIVLP*ALLSGVQGQDFQTL
Trigger: TAGAGTCTGGAAATCCTGCCCTTGAACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTCTGACTCGGAGCTGCATGACTGATGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 90 bp TTCTGTGAACTGTGGTACGCTTTTCCTATGCTCAAACCAAGGCAATaGCTGCCCACCCTTCTCAGTGCTGCAACAACTCTCAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: FCELWYAFPMLKPRQ*LPTLLSAATTLRMC
Trigger: GCACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACCACAGTTCACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 90 bp CAATGGCTGCCCACCCTTCTCAGTGCTGCAACAACTCTCAGGATGTaGATCTTTGGTCTTGTCACGGTGAAACACTGTGTGCATAGTGTT +
Preference number: 5 (lower is better)
Translates to: QWLPTLLSAATTLRM*IFGLVTVKHCVHSV
Trigger: AACACTATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 90 bp TTTTCCTATGCTCAAACCAAGGCAATGGCTGCCCACCCTTCTCAGTaGTGCAACAACTCTCAGGATGTGCATCTTTGGTCTTGTCACGGT +
Preference number: 5 (lower is better)
Translates to: FSYAQTKAMAAHPSQ*CNNSQDVHLWSCHG
Trigger: ACCGTGACAAGACCAAAGATGCACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 90 bp CTCATACCCTCCTGCGAACTCTGGCTCAGCACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACAGCAAACATGTATGTGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: LIPSCELWLSTTQEM*NEVCFTANMYVSLM
Trigger: CATGAGCGACACATACATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS CCA 90 bp TGCAATGAAGTCTGTTTCACAGCAAACATGTATGTGTCGCTCATGTaGACAGCACCGCAATCCTTCATACAGGGCAGCACAGTAGCCCTT +
Preference number: 5 (lower is better)
Translates to: CNEVCFTANMYVSLM*TAPQSFIQGSTVAL
Trigger: AAGGGCTACTGTGCTGCCCTGTATGAAGGATTGCGGTGCTGTCCACATGAGCGACACATACATGTTTGCTGTGAAACAGACTTCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 90 bp TGTCTTAGCATGTCTTTCTCTTCGCTCATACCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAGATGTGCAATGAAGTCTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: CLSMSFSSLIPSCEL*LSTTQEMCNEVCFT
Trigger: TGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGCGAAGAGAAAGACATGCTAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS TCA 90 bp GTGCTGCAACAACTCTCAGGATGTGCATCTTTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTGTTTCCTGAGGTCTCTCGATTACCT +
Preference number: 5 (lower is better)
Translates to: VLQQLSGCASLVLSR*NTVCIVFPEVSRLP
Trigger: AGGTAATCGAGAGACCTCAGGAAACACTATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTGAGAGTTGTTGCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 90 bp AATGACATTTCTGTAGGTTCTGTGAACTGTGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGCTGCCCACCCTTCTCAGTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: NDISVGSVNCGTLFL*SNQGNGCPPFSVLQ
Trigger: TTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACCACAGTTCACAGAACCTACAGAAATGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAATTTGCTCCAGCCGTaGTCAGCCAGCCACTACAAA +
Preference number: 5 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNNLLQP*SASHYK
Trigger: TTTGTAGTGGCTGGCTGACAACGGCTGGAGCAAATT...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp TCCAACATCCTCTGGCTGTTCCCTGGAAAGGTCCATAATGGAAAATaGTCCTACACTTGCTGTCCTTCCTGTGGTCTTCACTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: SNILWLFPGKVHNGK*SYTCCPSCGLHYFS
Trigger: AGAGAAGTAGTGAAGACCACAGGAAGGACAGCAAGTGTAGGATCATTTTCCATTATGGACCTTTCCAGGGAACAGCCAGAGGATGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS TCA 90 bp GGGCAGCACAGTAGCCCTTCTCTTTGCTGCAGTCAAGTTCACCAATaGGGATATTGTATGCTCGGAGGACTTTATTTTTGCAATCAGTGC +
Preference number: 5 (lower is better)
Translates to: GQHSSPSLCCSQVHQ*GYCMLGGLYFCNQC
Trigger: GCACTGATTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGTGAACTTGACTGCAGCAAAGAGAAGGGCTACTGTGCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACTCCAGACTCTACAAGTaGAGAAAAGAGGCGTTCCAC +
Preference number: 5 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNSRLYK*RKEAFH
Trigger: GTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGA...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAGTTCAACTAAGCTCTaGGCACCTTTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQSSTKL*APFPES
Trigger: TGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAACT...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp TTTGCTCCAGCCGTTGTCAGCCAGCCACTACAAACGGGCCTCTTGTaGTCATTTAAGCGGCAGTATTTATTAAATTTCTCCTTCAGATGC +
Preference number: 5 (lower is better)
Translates to: FAPAVVSQPLQTGLL*SFKRQYLLNFSFRC
Trigger: GCATCTGAAGGAGAAATTTAATAAATACTGCCGCTTAAATGATCACAAGAGGCCCGTTTGTAGTGGCTGGCTGACAACGGCTGGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp TCTCCCAGCTGCTCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCAGGAGTTCAACTAAGCTCTaGGCACCTTTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SPSCSNFETNKNETMCSRSSTKL*APFPES
Trigger: TGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAACT...CCTGGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCAGCTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CAA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATTCCAGACTCTACAAGTaGAGAAAAGAGGCGTTCCAC +
Preference number: 5 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHSRLYK*RKEAFH
Trigger: GTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGA...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACTTGGCGTTTCTTTTCTaGCTTGAGTTCTCTAACTCG +
Preference number: 5 (lower is better)
Translates to: TSLKKEQTNEVTSTVSQNLAFLF*LEFSNS
Trigger: CGAGTTAGAGAACTCAAGCAAGAAAAGAAACGCCAA...GTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTAATTTGCTCCAGCCGTaGTCAGCCAGCCACTACAAA +
Preference number: 5 (lower is better)
Translates to: TMVRYKVHEWQILKYHHGNLLQP*SASHYK
Trigger: TTTGTAGTGGCTGGCTGACAACGGCTGGAGCAAATT...ACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp TTGGCGTTTCTTTTCTTGCTTGAGTTCTCTAACTCGTTCTTCCTCTaGAAATTCCTCACAAAGTTGTTCCAAGCGGCTAATACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LAFLFLLEFSNSFFL*KFLTKLFQAANTLH
Trigger: GTGCAGGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAGAGAACTCAAGCAAGAAAAGAAACGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp ATCTTTGGTCTTGTCACGGTGAAACACTGTGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGGATCTGTAATACAGCTTCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: IFGLVTVKHCVHSVS*GLSITWICNTASKF
Trigger: AAACTTGGAAGCTGTATTACAGATCCAGGTAATCGAGAGACCTCAGGAAACACTATGCACACAGTGTTTCACCGTGACAAGACCAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 90 bp GCCCTTCTCTTTGCTGCAGTCAAGTTCACCAATGAGGATATTGTATaGTCGGAGGACTTTATTTTTGCAATCAGTGCAAAACCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: ALLFAAVKFTNEDIV*SEDFIFAISAKPVL
Trigger: AAGCACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGTGAACTTGACTGCAGCAAAGAGAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 90 bp TCCTCTGAAAATTCCTCACAAAGTTGTTCCAAGCGGCTAATACCCTaGACTTTTTCCACAGTCATCTCAAAGCTCTTACGTAAAGCGTCA +
Preference number: 5 (lower is better)
Translates to: SSENSSQSCSKRLIP*TFSTVISKLLRKAS
Trigger: TGACGCTTTACGTAAGAGCTTTGAGATGACTGTGGAAAAAGTGCAGGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAGAGATAGTACTCCCTaGGGCCCTACTGTCAGGGGT +
Preference number: 5 (lower is better)
Translates to: KLGVFKREGAVVILSVSLRDSTP*GPTVRG
Trigger: ACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTCT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GACACAAGCCTGAAGAAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAACAGCTTCCAAGTTTTaGGATATGTTCATCGCATTT +
Preference number: 5 (lower is better)
Translates to: DTSLKKEQTNEVTSTVSQTASKF*DMFIAF
Trigger: AAATGCGATGAACATATCCAAAAACTTGGAAGCTGT...TTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAGGCTTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACGGTGAGTCACCAATGAGGATATaGTATGCTCGGAGGACTTTA +
Preference number: 5 (lower is better)
Translates to: MVRYKVHEWQILKYHHGESPMRI*YARRTL
Trigger: TAAAGTCCTCCGAGCATACAATATCCTCATTGGTGA...CTCACCGTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTAATTTGCTCCAGCCGTaGTCAGCCAGCCACTACAAA +
Preference number: 5 (lower is better)
Translates to: RRRSSHLECFIERQSYFINLLQP*SASHYK
Trigger: TTTGTAGTGGCTGGCTGACAACGGCTGGAGCAAATT...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTAATTTGCTCCAGCCGTaGTCAGCCAGCCACTACAAA +
Preference number: 5 (lower is better)
Translates to: EVTKLGVFKREGAVVILSNLLQP*SASHYK
Trigger: TTTGTAGTGGCTGGCTGACAACGGCTGGAGCAAATT...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGATCCAGACTCTACAAGTaGAGAAAAGAGGCGTTCCAC +
Preference number: 5 (lower is better)
Translates to: VFKREGAVVILSVSLKDRSRLYK*RKEAFH
Trigger: GTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGA...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATATGTATAAAGCTTTTTaGCATCAGTCATGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHMYKAF*HQSCSS
Trigger: GGAGCTGCATGACTGATGCAAAAAAGCTTTATACAT...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATTCTGTTCTTCCGTTTTaGGCGTTTCTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHSVLPF*AFLFLL
Trigger: AAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGA...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGTTCAACTAAGCTCTaGGCACCTTTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GVFKREGAVVILSVSLKDSSTKL*APFPES
Trigger: TGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAACT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTAGTTCAACTAAGCTCTaGGCACCTTTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: FKREGAVVILSVSLKDRASSTKL*APFPES
Trigger: TGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAACT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAATTTGCTCCAGCCGTaGTCAGCCAGCCACTACAAA +
Preference number: 5 (lower is better)
Translates to: KLGVFKREGAVVILSVSLNLLQP*SASHYK
Trigger: TTTGTAGTGGCTGGCTGACAACGGCTGGAGCAAATT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGTCCAGACTCTACAAGTaGAGAAAAGAGGCGTTCCAC +
Preference number: 5 (lower is better)
Translates to: KLGVFKREGAVVILSVSLSRLYK*RKEAFH
Trigger: GTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGA...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTAAAATGATCCTACACTaGCTGTCCTTCCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: EVTKLGVFKREGAVVILSKMILH*LSFLWS
Trigger: AGACCACAGGAAGGACAGCAAGTGTAGGATCATTTT...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS-3UTR CAA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTCGGAGGACTTTATTTTaGCAATCAGTGCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: FKREGAVVILSVSLKDRARRTLF*QSVQNL
Trigger: CAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCG...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTCGGAGGACTTTATTTTaGCAATCAGTGCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: KREGAVVILSVSLKDRAIRRTLF*QSVQNL
Trigger: CAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCG...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTTCACCAATGAGGATATaGTATGCTCGGAGGACTTTA +
Preference number: 5 (lower is better)
Translates to: FKREGAVVILSVSLKDRASPMRI*YARRTL
Trigger: TAAAGTCCTCCGAGCATACAATATCCTCATTGGTGA...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ATTTTGCACATTGCCTTTAACATTCTGTCCAGATGCTTTGCAAGTGGATGTCTATCACCAATGAGGATATaGTATGCTCGGAGGACTTTA +
Preference number: 5 (lower is better)
Translates to: ILHIAFNILSRCFASGCLSPMRI*YARRTL
Trigger: TAAAGTCCTCCGAGCATACAATATCCTCATTGGTGA...TAGACATCCACTTGCAAAGCATCTGGACAGAATGTTAAAGGCAATGTGCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAAATTCCTCACAAAGTaGTTCCAAGCGGCTAATACC +
Preference number: 5 (lower is better)
Translates to: GVFKREGAVVILSVSLKDKFLTK*FQAANT
Trigger: GGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTTTGGCGTTTCTTTTCTaGCTTGAGTTCTCTAACTCG +
Preference number: 5 (lower is better)
Translates to: FKREGAVVILSVSLKDRALAFLF*LEFSNS
Trigger: CGAGTTAGAGAACTCAAGCAAGAAAAGAAACGCCAA...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACTTGGCGTTTCTTTTCTaGCTTGAGTTCTCTAACTCG +
Preference number: 5 (lower is better)
Translates to: GVFKREGAVVILSVSLKDLAFLF*LEFSNS
Trigger: CGAGTTAGAGAACTCAAGCAAGAAAAGAAACGCCAA...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAAGAACAAACGAATGAGGTTACCTCCACCGTCTCCCAAAACAAGGAATCACATACAGCTTCCAAGTTTTaGGATATGTTCATCGCATTT +
Preference number: 5 (lower is better)
Translates to: KEQTNEVTSTVSQNKESHTASKF*DMFIAF
Trigger: AAATGCGATGAACATATCCAAAAACTTGGAAGCTGT...ATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAAGTTCAACTAAGCTCTaGGCACCTTTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: VFKREGAVVILSVSLKDRSSTKL*APFPES
Trigger: TGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAACT...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTAGTTCAACTAAGCTCTaGGCACCTTTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: RRRSSHLECFIERQSYFISSTKL*APFPES
Trigger: TGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAACT...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTATGTATAAAGCTTTTTaGCATCAGTCATGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KREGAVVILSVSLKDRAIMYKAF*HQSCSS
Trigger: GGAGCTGCATGACTGATGCAAAAAAGCTTTATACAT...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp TCAACAATGGTTAGATACAAAGTTCACGAGTGGCAAATACTAAAGTACCACCACATGTATAAAGCTTTTTaGCATCAGTCATGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: STMVRYKVHEWQILKYHHMYKAF*HQSCSS
Trigger: GGAGCTGCATGACTGATGCAAAAAAGCTTTATACAT...GTGGTGGTACTTTAGTATTTGCCACTCGTGAACTTTGTATCTAACCATTGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACATGTATAAAGCTTTTTaGCATCAGTCATGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GVFKREGAVVILSVSLKDMYKAF*HQSCSS
Trigger: GGAGCTGCATGACTGATGCAAAAAAGCTTTATACAT...GTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTCGGAGGACTTTATTTTaGCAATCAGTGCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: EVTKLGVFKREGAVVILSRRTLF*QSVQNL
Trigger: CAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCG...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGATCACCAATGAGGATATaGTATGCTCGGAGGACTTTA +
Preference number: 5 (lower is better)
Translates to: VFKREGAVVILSVSLKDRSPMRI*YARRTL
Trigger: TAAAGTCCTCCGAGCATACAATATCCTCATTGGTGA...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTAAATTCCTCACAAAGTaGTTCCAAGCGGCTAATACC +
Preference number: 5 (lower is better)
Translates to: EVTKLGVFKREGAVVILSKFLTK*FQAANT
Trigger: GGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTT...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTCGTTTCTTTTCTTGCTaGAGTTCTCTAACTCGTTCT +
Preference number: 5 (lower is better)
Translates to: KREGAVVILSVSLKDRAIRFFSC*SSLTRS
Trigger: AGAACGAGTTAGAGAACTCAAGCAAGAAAAGAAACG...AATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp TGCTCTAACTTTGAGACAAACAAGAATGAGACAATGTGCTCCAGGAGTCACAAAACAGCTTCCAAGTTTTaGGATATGTTCATCGCATTT +
Preference number: 5 (lower is better)
Translates to: CSNFETNKNETMCSRSHKTASKF*DMFIAF
Trigger: AAATGCGATGAACATATCCAAAAACTTGGAAGCTGT...TTTGTGACTCCTGGAGCACATTGTCTCATTCTTGTTTGTCTCAAAGTTAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132098.2
CDS-3UTR CAA 90 bp AGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTATTTTATTATGTATAAAGCTTTTTaGCATCAGTCATGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RRRSSHLECFIERQSYFIMYKAF*HQSCSS
Trigger: GGAGCTGCATGACTGATGCAAAAAAGCTTTATACAT...AATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ACAAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCACGGAGGACTTTATTTTaGCAATCAGTGCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: TRLELLFSVIKSHQRKNSRRTLF*QSVQNL
Trigger: CAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCG...TGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAATTCCTCACAAAGTaGTTCCAAGCGGCTAATACC +
Preference number: 5 (lower is better)
Translates to: KLGVFKREGAVVILSVSLKFLTK*FQAANT
Trigger: GGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTT...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ACAAGACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAAAATTCCTCACAAAGTaGTTCCAAGCGGCTAATACC +
Preference number: 5 (lower is better)
Translates to: TRLELLFSVIKSHQRKNSKFLTK*FQAANT
Trigger: GGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTT...TGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGTCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTCGTTTCTTTTCTTGCTaGAGTTCTCTAACTCGTTCT +
Preference number: 5 (lower is better)
Translates to: EVTKLGVFKREGAVVILSRFFSC*SSLTRS
Trigger: AGAACGAGTTAGAGAACTCAAGCAAGAAAAGAAACG...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GAAGTCACTAAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTTCTGTTCTTCCGTTTTaGGCGTTTCTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: EVTKLGVFKREGAVVILSSVLPF*AFLFLL
Trigger: AAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGA...ACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGATCTGTTCTTCCGTTTTaGGCGTTTCTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VFKREGAVVILSVSLKDRSVLPF*AFLFLL
Trigger: AAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGA...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp TTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAGCTACAGCTTCCAAGTTTTaGGATATGTTCATCGCATTT +
Preference number: 5 (lower is better)
Translates to: FKREGAVVILSVSLKDRATASKF*DMFIAF
Trigger: AAATGCGATGAACATATCCAAAAACTTGGAAGCTGT...AGCTCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 90 bp CCTTCACCCAGAGGTTTAGGTTTGTGTGTATCTAAAGAGTGTAACTaGCATCTCTTGTTCTTCTTACTTTTTGGAATAGCATCTATCATA +
Preference number: 5 (lower is better)
Translates to: PSPRGLGLCVSKECN*HLLFFLLFGIASII
Trigger: TATGATAGATGCTATTCCAAAAAGTAAGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTCTGGGTGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS TCA 90 bp CATCCTCCCAGAGGTTTAGGTTTGTGTGTATCTAAAGAGTGTAACTaGCATCTCTTGTTCTTCTTACTTTTTGGAATAGCATCTATCATA +
Preference number: 5 (lower is better)
Translates to: HPPRGLGLCVSKECN*HLLFFLLFGIASII
Trigger: TATGATAGATGCTATTCCAAAAAGTAAGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTCTGGGAGGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp ACTAGAACTGCTTTTCTCAGTTATCAAGTCTCATCAAAGGAAGAATTCAGTCTTCGTTTCTTTTCTTGCTaGAGTTCTCTAACTCGTTCT +
Preference number: 5 (lower is better)
Translates to: TRTAFLSYQVSSKEEFSLRFFSC*SSLTRS
Trigger: AGAACGAGTTAGAGAACTCAAGCAAGAAAAGAAACG...AAGACTGAATTCTTCCTTTGATGAGACTTGATAACTGAGAAAAGCAGTTCTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108081.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGCGTTTCTTTTCTTGCTaGAGTTCTCTAACTCGTTCT +
Preference number: 5 (lower is better)
Translates to: KLGVFKREGAVVILSVSLRFFSC*SSLTRS
Trigger: AGAACGAGTTAGAGAACTCAAGCAAGAAAAGAAACG...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp AAATTAGGAGTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGTCTGTTCTTCCGTTTTaGGCGTTTCTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KLGVFKREGAVVILSVSLSVLPF*AFLFLL
Trigger: AAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGA...CAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS-3UTR CAA 90 bp GTTTTTAAAAGAGAAGGCGCAGTAGTCATCTTGAGTGTTTCATTGAAAGACAGAACAGCTTCCAAGTTTTaGGATATGTTCATCGCATTT +
Preference number: 5 (lower is better)
Translates to: VFKREGAVVILSVSLKDRTASKF*DMFIAF
Trigger: AAATGCGATGAACATATCCAAAAACTTGGAAGCTGT...TCTGTCTTTCAATGAAACACTCAAGATGACTACTGCGCCTTCTCTTTTAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000018547.9
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 72 bp GCTCAAACCAAGGCAATGGCTGCCCACCCTTCTCAGTaGTGCAACAACTCTCAGGATGTGCATCTTTGGTCT +
Preference number: 6 (lower is better)
Translates to: AQTKAMAAHPSQ*CNNSQDVHLWS
Trigger: AGACCAAAGATGCACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 72 bp TGTCTTAGCATGTCTTTCTCTTCGCTCATACCCTCCTaGGAACTCTGGCTCAGCACGACCCAAGAGATGTGC +
Preference number: 6 (lower is better)
Translates to: CLSMSFSSLIPS*ELWLSTTQEMC
Trigger: GCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGCGAAGAGAAAGACATGCTAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS CCA 72 bp CTTAGCATGTCTTTCTCTTCGCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAGATGTGCAATGAAGTC +
Preference number: 6 (lower is better)
Translates to: LSMSFSSPSCEL*LSTTQEMCNEV
Trigger: GACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGCGAAGAGAAAGACATGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000154915.9
ENSMUST00000168434.8
CDS CCA 72 bp CTGTGGTACGCTTTTCCTATGCTCAAACCAAGGCAATaGCTGCCCACCCTTCTCAGTGCTGCAACAACTCTC +
Preference number: 6 (lower is better)
Translates to: LWYAFPMLKPRQ*LPTLLSAATTL
Trigger: GAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CAA 90 bp CCCTACTGTCAGGGGTTCAAGGGCAGGATTTCCAGACTCTACAAGTaGAGAAAAGAGGCGTTCCACACTTCGACGACAACCAACACATGG +
Preference number: 6 (lower is better)
Translates to: PYCQGFKGRISRLYK*RKEAFHTSTTTNTW
Trigger: CCATGTGTTGGTTGTCGTCGAAGTGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCTGACAGTAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 72 bp AAAGAGGCGTTCCACACTTCGACGACAACCAACACATaGGACAAGCTGAGAAAGTGCACTCAAGACTTCGCG +
Preference number: 6 (lower is better)
Translates to: KEAFHTSTTTNT*DKLRKCTQDFA
Trigger: CGCGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGTCGAAGTGTGGAACGCCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 72 bp ATGTCTTTCTCTTCGCTCATACCCTCCTGCGAACTCTaGCTCAGCACGACCCAAGAGATGTGCAATGAAGTC +
Preference number: 6 (lower is better)
Translates to: MSFSSLIPSCEL*LSTTQEMCNEV
Trigger: GACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGCGAAGAGAAAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS CAA 72 bp CAGGGGTTCAAGGGCAGGATTTCCAGACTCTACAAGTaGAGAAAAGAGGCGTTCCACACTTCGACGACAACC +
Preference number: 6 (lower is better)
Translates to: QGFKGRISRLYK*RKEAFHTSTTT
Trigger: GGTTGTCGTCGAAGTGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp TCCACACTTCGACGACAACCAACACATGGGACAAGCTaGGAAAGTGCACTCAAGACTTCGCGTGATGTTACC +
Preference number: 6 (lower is better)
Translates to: STLRRQPTHGTS*ESALKTSRDVT
Trigger: GGTAACATCACGCGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGTCGAAGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp AGGGGTTCAAGGGCAGGATTTCCAGACTCTACAAGTTaGGAAAAGAGGCGTTCCACACTTCGACGACAACCA +
Preference number: 6 (lower is better)
Translates to: RGSRAGFPDSTS*EKRRSTLRRQP
Trigger: TGGTTGTCGTCGAAGTGTGGAACGCCTCTTTTCTCAACTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 72 bp TCTGTAGGTTCTGTGAACTGTGGTACGCTTTTCCTATaGTCAAACCAAGGCAATGGCTGCCCACCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SVGSVNCGTLFL*SNQGNGCPPFS
Trigger: TGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAGCGTACCACAGTTCACAGAACCTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 72 bp GTCTGTTTCACAGCAAACATGTATGTGTCGCTCATGTaGACAGCACCGCAATCCTTCATACAGGGCAGCACA +
Preference number: 6 (lower is better)
Translates to: VCFTANMYVSLM*TAPQSFIQGST
Trigger: TGTGCTGCCCTGTATGAAGGATTGCGGTGCTGTCCACATGAGCGACACATACATGTTTGCTGTGAAACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp CTCTGGCTGTTCCCTGGAAAGGTCCATAATGGAAAATaGTCCTACACTTGCTGTCCTTCCTGTGGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: LWLFPGKVHNGK*SYTCCPSCGLH
Trigger: GTGAAGACCACAGGAAGGACAGCAAGTGTAGGATCATTTTCCATTATGGACCTTTCCAGGGAACAGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS TCA 72 bp CGAACTCTGGCTCAGCACGACCCAAGAGATGTGCAATaGAGTCTGTTTCACAGCAAACATGTATGTGTCGCT +
Preference number: 6 (lower is better)
Translates to: RTLAQHDPRDVQ*SLFHSKHVCVA
Trigger: AGCGACACATACATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 72 bp TCCTGCGAACTCTGGCTCAGCACGACCCAAGAGATGTaGAATGAAGTCTGTTTCACAGCAAACATGTATGTG +
Preference number: 6 (lower is better)
Translates to: SCELWLSTTQEM*NEVCFTANMYV
Trigger: CACATACATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp CAACTCTCAGGATGTGCATCTTTGGTCTTGTCACGGTaGAACACTGTGTGCATAGTGTTTCCTGAGGTCTCT +
Preference number: 6 (lower is better)
Translates to: QLSGCASLVLSR*NTVCIVFPEVS
Trigger: AGAGACCTCAGGAAACACTATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTGAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp CAATTAAAACTACTTCATCCCTGCATTCCTGGGACATaGGTTCCCAAACATCCATCCAACATCCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: QLKLLHPCIPGT*VPKHPSNILWL
Trigger: CAGCCAGAGGATGTTGGATGGATGTTTGGGAACTCATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018547.9
CDS TCA 72 bp CTTGTCACGGTGAAACACTGTGTGCATAGTGTTTCCTaGGGTCTCTCGATTACCTGGATCTGTAATACAGCT +
Preference number: 6 (lower is better)
Translates to: LVTVKHCVHSVS*GLSITWICNTA
Trigger: AGCTGTATTACAGATCCAGGTAATCGAGAGACCTCAGGAAACACTATGCACACAGTGTTTCACCGTGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp GCCGTTGTCAGCCAGCCACTACAAACGGGCCTCTTGTaGTCATTTAAGCGGCAGTATTTATTAAATTTCTCC +
Preference number: 6 (lower is better)
Translates to: AVVSQPLQTGLL*SFKRQYLLNFS
Trigger: GGAGAAATTTAATAAATACTGCCGCTTAAATGATCACAAGAGGCCCGTTTGTAGTGGCTGGCTGACAACGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp CAATTAAAACTACTTCATCCCTGCATTCCTGGGACATaGGTTCCCAAACATCCATCCAACATCCTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: QLKLLHPCIPGT*VPKHPSNILPE
Trigger: CTCTGGGAGGATGTTGGATGGATGTTTGGGAACTCATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS GCA 72 bp CTTCACCATGTTCATCATGGTTACAAATTCCCTCGGTaGAGGCAACATCTGAACCTTCTCGAGAACCTGTTT +
Preference number: 6 (lower is better)
Translates to: LHHVHHGYKFPR*RQHLNLLENLF
Trigger: AAACAGGTTCTCGAGAAGGTTCAGATGTTGCCTGCACCGAGGGAATTTGTAACCATGATGAACATGGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000170741.2
ENSMUST00000172405.8
CDS TCA 72 bp AGTAGCCCTTCTCTTTGCTGCAGTCAAGTTCACCAATaGGGATATTGTATGCTCGGAGGACTTTATTTTTGC +
Preference number: 6 (lower is better)
Translates to: SSPSLCCSQVHQ*GYCMLGGLYFC
Trigger: GCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGTGAACTTGACTGCAGCAAAGAGAAGGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS TCA 72 bp TTCTCGAGAACCTGTTTCACTTCCTTCCATGCTAGATaGATATCCACAGTCACTACCATTACAGTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: FSRTCFTSFHAR*ISTVTTITVWR
Trigger: TCTCCACACTGTAATGGTAGTGACTGTGGATATTCATCTAGCATGGAAGGAAGTGAAACAGGTTCTCGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000170741.2
ENSMUST00000172405.8
CDS GCA 72 bp AATTCCTCACAAAGTTGTTCCAAGCGGCTAATACCCTaGACTTTTTCCACAGTCATCTCAAAGCTCTTACGT +
Preference number: 6 (lower is better)
Translates to: NSSQSCSKRLIP*TFSTVISKLLR
Trigger: ACGTAAGAGCTTTGAGATGACTGTGGAAAAAGTGCAGGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 72 bp CTAGAGTCAATTAAAACTACTTCATCCCTGCATTCCTaGGACATGAGTTCCCAAACATCCATCCAACATCCT +
Preference number: 6 (lower is better)
Translates to: LESIKTTSSLHS*DMSSQTSIQHP
Trigger: AGGATGTTGGATGGATGTTTGGGAACTCATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTGACTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CAA 90 bp CAGTCGTTCATAAAGATGAATCCCCAAGCAGGTCAAAACTTCTTCTaGAGCTATATCTATTGTCTTAGCATGTCTTTCTCTTCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: QSFIKMNPQAGQNFF*SYIYCLSMSFSSPS
Trigger: GGAGGGCGAAGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAAGTTTTGACCTGCTTGGGGATTCATCTTTATGAACGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000154915.9
ENSMUST00000168434.8
CDS CAA 90 bp CAGTCGTTCATAAAGATGAATCCCCAAGCAGGTCAAAACTTCTTCTaGAGCTATATCTATTGTCTTAGCATGTCTTTCTCTTCGCTCATA +
Preference number: 6 (lower is better)
Translates to: QSFIKMNPQAGQNFF*SYIYCLSMSFSSLI
Trigger: TATGAGCGAAGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAAGTTTTGACCTGCTTGGGGATTCATCTTTATGAACGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108081.9
ENSMUST00000172405.8
CDS GCA 72 bp TTTGCTGCAGTCAAGTTCACCAATGAGGATATTGTATaGTCGGAGGACTTTATTTTTGCAATCAGTGCAAAA +
Preference number: 6 (lower is better)
Translates to: FAAVKFTNEDIV*SEDFIFAISAK
Trigger: TTTTGCACTGATTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGTGAACTTGACTGCAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CAA 72 bp CCAATGAGGATATTGTATGCTCGGAGGACTTTATTTTaGCAATCAGTGCAAAACCTGTGCTTTCGAAGATAT +
Preference number: 6 (lower is better)
Translates to: PMRILYARRTLF*QSVQNLCFRRY
Trigger: ATATCTTCGAAAGCACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CCA 72 bp CGATTACCTGGATCTGTAATACAGCTTCCAAGTTTTTaGATATGTTCATCGCATTTCAACATCTTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: RLPGSVIQLPSF*ICSSHFNILLF
Trigger: GAAAAGCAAGATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAATCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000170741.2
ENSMUST00000172405.8
CDS CAA 72 bp ATAAAGATGAATCCCCAAGCAGGTCAAAACTTCTTCTaGAGCTATATCTATTGTCTTAGCATGTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: IKMNPQAGQNFF*SYIYCLSMSFS
Trigger: AGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAAGTTTTGACCTGCTTGGGGATTCATCTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000172405.8
CDS CAA 72 bp TCGATTACCTGGATCTGTAATACAGCTTCCAAGTTTTaGGATATGTTCATCGCATTTCAACATCTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: SITWICNTASKF*DMFIAFQHLAF
Trigger: AAAAGCAAGATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAATCGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000018547.9
ENSMUST00000100686.10
ENSMUST00000108081.9
ENSMUST00000132098.2
ENSMUST00000154915.9
ENSMUST00000168434.8
ENSMUST00000170741.2
ENSMUST00000172405.8