Pregenerated sensors for GGNBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048731Ensembl transcript IDs: ENSMUST00000053683.7, ENSMUST00000122106.9, ENSMUST00000142141.3, ENSMUST00000154731.3, ENSMUST00000235543.2, ENSMUST00000236222.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTaGGGTCCCAGGAGTGTGGGCACGGTGGGCTCCTGCCGGCACGGG | + |
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Preference number: 1 (lower is better) Translates to: PGTPCMCPKKRHTPD*GPRSVGTVGSCRHG Trigger: CCCGTGCCGGCAGGAGCCCACCGTGCCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| 3UTR TCA 90 bp | AAGATCGCCTCCAGGTACCAGCCCATCCTCCACCCCGCAGACGCATaGCGCAGACTCAGACGCTCCATAGGATGGGCTCCCCAGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: KIASRYQPILHPADA*RRLRRSIGWAPQLR Trigger: CCTCAGCTGGGGAGCCCATCCTATGGAGCGTCTGAGTCTGCGTCATGCGTCTGCGGGGTGGAGGATGGGCTGGTACCTGGAGGCGATCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142141.3 |
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| 3UTR GCA 90 bp | ACGGGTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATaGTACTCATCCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGT | + |
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Preference number: 1 (lower is better) Translates to: TGRDSARQANRTHTG*YSSQNPGPQGLLAC Trigger: ACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTACCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| 3UTR GCA 90 bp | TTGATTGCTAACCGTTGCCAGGGGGCCCCAGCCTGTTGTGGGCGGTaGTATCCTAGGGCAGGTGGTCCCTGTGCTCTACAGAAAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LIANRCQGAPACCGR*YPRAGGPCALQKGS Trigger: GCTGCCTTTCTGTAGAGCACAGGGACCACCTGCCCTAGGATAGCACCGCCCACAACAGGCTGGGGCCCCCTGGCAACGGTTAGCAATCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR GCA 90 bp | TTAGCCCTCGGTGTGCTTGTCCTCCTTCTCTTGATTGCTAACCGTTaGCAGGGGGCCCCAGCCTGTTGTGGGCGGTGCTATCCTAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LALGVLVLLLLIANR*QGAPACCGRCYPRA Trigger: TGCCCTAGGATAGCACCGCCCACAACAGGCTGGGGCCCCCTGGCAACGGTTAGCAATCAAGAGAAGGAGGACAAGCACACCGAGGGCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR TCA 90 bp | TTTGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCCTCTCCTGAACTTTCACATCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: FELRTFGRAVGALNH*AISPAPLLNFHIFS Trigger: GCTGAAGATGTGAAAGTTCAGGAGAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCCGAAGGTCCTGAGTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR TCA 90 bp | CAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTCTCCTaGACTTTCACATCTTCAGCTGTCAATTTGGCACATCTGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QSVLLTTEPSLQPLS*TFTSSAVNLAHLGR Trigger: TCTTCCCAGATGTGCCAAATTGACAGCTGAAGATGTGAAAGTTCAGGAGAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR TCA 90 bp | TCAGATGCACCAGAAGAGGGCATCAGATCTCACTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGA | + |
|
Preference number: 1 (lower is better) Translates to: SDAPEEGIRSHYRWL*ATMWLLGFELRTFG Trigger: TCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAGTGAGATCTGATGCCCTCTTCTGGTGCATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR CCA 90 bp | GCATCAGATCTCACTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDLTTDGCEPPCGC*DLNSGPSEEQSVLL Trigger: TAAGAGCACCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAGTGAGATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR CCA 90 bp | CTCTCCAGCCCCTCTCCTGAACTTTCACATCTTCAGCTGTCAATTTaGCACATCTGGGAAGAGAGTGTTAACTCAAGGATTGCCTCCATT | + |
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Preference number: 1 (lower is better) Translates to: LSSPSPELSHLQLSI*HIWEESVNSRIASI Trigger: AATGGAGGCAATCCTTGAGTTAACACTCTCTTCCCAGATGTGCCAAATTGACAGCTGAAGATGTGAAAGTTCAGGAGAGGGGCTGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGAGGACCCGGGTTTGGTTCCCAGCCGCCACATTGGGCGACTTACACTTGACACACATGCGCTCTTaGGACACACACACACACACA | + |
|
Preference number: 2 (lower is better) Translates to: GQRTRVWFPAATLGDLHLTHMRS*DTHTHT Trigger: TGTGTGTGTGTGTGTGTCTCAAGAGCGCATGTGTGT...CAAGTGTAAGTCGCCCAATGTGGCGGCTGGGAACCAAACCCGGGTCCTCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR CAA 90 bp | GATCTCACTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCTCTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: DLTTDGCEPPCGCWD*NSGPSEEQSVLLTT Trigger: AGTGGTTAAGAGCACCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAGTGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR-3UTR GCA 90 bp | GGAATGGTACGGGGACAGACAGCCCAGGAGGTGAATGCCAAACTAAGCTTTTATCGCACACACACAGGATaGTACTCATCCCAAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: GMVRGQTAQEVNAKLSFYRTHTG*YSSQNP Trigger: TGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCG...ATAAAAGCTTAGTTTGGCATTCACCTCCTGGGCTGTCTGTCCCCGTACCATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236222.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTCAGATGCACCAGAAGAGGGCATCAGATCTCACTACAGATGGTTGTGAGTACTTAACACACACATaGGCTCTTGAGACACACACA | + |
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Preference number: 2 (lower is better) Translates to: CLQMHQKRASDLTTDGCEYLTHT*ALETHT Trigger: TGTGTGTGTCTCAAGAGCGCATGTGTGTGTTAAGTA...CTCACAACCATCTGTAGTGAGATCTGATGCCCTCTTCTGGTGCATCTGAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR GCA 72 bp | AACCGTTGCCAGGGGGCCCCAGCCTGTTGTGGGCGGTaGTATCCTAGGGCAGGTGGTCCCTGTGCTCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: NRCQGAPACCGR*YPRAGGPCALQ Trigger: CTGTAGAGCACAGGGACCACCTGCCCTAGGATAGCACCGCCCACAACAGGCTGGGGCCCCCTGGCAACGGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR CCA 72 bp | CCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTaGGGTCCCAGGAGTGTGGGCACGGTGGGCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PCMCPKKRHTPD*GPRSVGTVGSC Trigger: GCAGGAGCCCACCGTGCCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| 3UTR GCA 72 bp | GACAGTGCCAGGCAGGCCAACCGCACACACACAGGATaGTACTCATCCCAAAACCCAGGGCCCCAGGGACTC | + |
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Preference number: 3 (lower is better) Translates to: DSARQANRTHTG*YSSQNPGPQGL Trigger: GAGTCCCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| 3UTR-3UTR CAA 90 bp | GGTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCGGCCCCAGGGACTCCTaGCATGTGTCCCAAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: GRDSARQANRTHTGCYSSGPRDS*HVSQEE Trigger: CTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCC...GGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| 3UTR GCA 72 bp | GGTGTGCTTGTCCTCCTTCTCTTGATTGCTAACCGTTaGCAGGGGGCCCCAGCCTGTTGTGGGCGGTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: GVLVLLLLIANR*QGAPACCGRCY Trigger: ATAGCACCGCCCACAACAGGCTGGGGCCCCCTGGCAACGGTTAGCAATCAAGAGAAGGAGGACAAGCACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCGGCCCCAGGGACTCCTaGCATGTGTCCCAAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: TVPGRPTAHTQDATHPKTGPRDS*HVSQEE Trigger: CTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCC...GGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| 3UTR CCA 72 bp | TACAGAAAGGCAGCTGAAGGGCAGAGGACCCGGGTTTaGTTCCCAGCCGCCACATTGGGCGACTTACACTTG | + |
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Preference number: 3 (lower is better) Translates to: YRKAAEGQRTRV*FPAATLGDLHL Trigger: CAAGTGTAAGTCGCCCAATGTGGCGGCTGGGAACCAAACCCGGGTCCTCTGCCCTTCAGCTGCCTTTCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR TCA 72 bp | AGGACCTTCGGAAGAGCAGTCGGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCCTCTCCTGAACTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: RTFGRAVGALNH*AISPAPLLNFH Trigger: GTGAAAGTTCAGGAGAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCCGAAGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR CCA 72 bp | CTCACTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LTTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGCATCAGATCTCACTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEEGIRSHYRWL*ATMWLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAGTGAGATCTGATGCCCTCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR GCA 72 bp | GATCTCACTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLTTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAGTGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR GCA 72 bp | GGGAATGGTACGGGGACAGACAGCCCAGGAGGTGAATaGCAAACTAAGCTTTTATTAATAACGTCATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GNGTGTDSPGGE*QTKLLLITSSA Trigger: TGCAGATGACGTTATTAATAAAAGCTTAGTTTGGCATTCACCTCCTGGGCTGTCTGTCCCCGTACCATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236222.2 |
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| 3UTR CCA 72 bp | CCCTCTCCTGAACTTTCACATCTTCAGCTGTCAATTTaGCACATCTGGGAAGAGAGTGTTAACTCAAGGATT | + |
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Preference number: 3 (lower is better) Translates to: PSPELSHLQLSI*HIWEESVNSRI Trigger: AATCCTTGAGTTAACACTCTCTTCCCAGATGTGCCAAATTGACAGCTGAAGATGTGAAAGTTCAGGAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| 3UTR CCA 72 bp | GAACTTTCACATCTTCAGCTGTCAATTTGGCACATCTaGGAAGAGAGTGTTAACTCAAGGATTGCCTCCATT | + |
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Preference number: 3 (lower is better) Translates to: ELSHLQLSIWHI*EESVNSRIASI Trigger: AATGGAGGCAATCCTTGAGTTAACACTCTCTTCCCAGATGTGCCAAATTGACAGCTGAAGATGTGAAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCGAGGAAGCTGCAGAGTaGACCTTGGCCCGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PQGLLACVPRRGTRQTGVEEAAE*TLARGS Trigger: GGAGCCCCGGGCCAAGGTCCACTCTGCAGCTTCCTC...GACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR GCA 90 bp | GGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGACGGGTTGGAGGGAGCTaGAGAGAGAACCCTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GLLACVPRRGTRQTGVPGRVGGS*RENPGR Trigger: CCGCCCAGGGTTCTCTCTGCAGCTCCCTCCAACCCG...TCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR CCA 90 bp | CCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCATGAGGAGCTGGGCTaGCTCCTGGTCAGGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PRDSLHVSQEEAHARLGSHEELG*LLVRGL Trigger: CAAGCCCCTGACCAGGAGCCAGCCCAGCTCCTCATG...GGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR CCA 90 bp | TTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGGCTCCCATGAGGAGCTaGGCTGGCTCCTGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LHVSQEEAHARLGSQECGAPMRS*AGSWSG Trigger: CCCTGACCAGGAGCCAGCCCAGCTCCTCATGGGAGC...CCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR CCA 90 bp | AGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGCTGCAGAGTGGACCTTaGCCCGGGGCTCCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RPTAHTQDATHPKTQGPRLQSGP*PGAPSS Trigger: GGAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGCAG...CCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR CCA 90 bp | GGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGACTGCAGAGAGAACCCTaGGCGGGGGCTCCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GLLACVPRRGTRQTGVPGLQREP*AGAPSS Trigger: GGAAGAGGGAGCCCCCGCCCAGGGTTCTCTCTGCAG...TCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR CCA 90 bp | CCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGCACGGTGGGCTCCCCTTTCTCCTCGTaGGGCAAGCCATCCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PKKRHTPDWGPRSVGTVGSPFSS*GKPSLR Trigger: TCTCAAGGATGGCTTGCCCCACGAGGAGAAAGGGGA...GCCCACCGTGCCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS-3UTR CCA 90 bp | TGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGCACGGTGCTCCAGTGTGATGTCTaGCTGGGTCAGCAGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: CPKKRHTPDWGPRSVGTVLQCDV*LGQQLP Trigger: CGGGAGCTGCTGACCCAGCCAGACATCACACTGGAG...CACCGTGCCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS-3UTR CCA 90 bp | TTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGTCCAGGAGCAGGTGCTaGCCGTCCACCATGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LHVSQEEAHARLGSQECGSRSRC*PSTMPA Trigger: GGCTGGCATGGTGGACGGCCAGCACCTGCTCCTGGA...CCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS-3UTR CCA 90 bp | AAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCATCCAGGAGCAGGTGCTaGCCGTCCACCATGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KPRAPGTPCMCPKKRHTPSRSRC*PSTMPA Trigger: GGCTGGCATGGTGGACGGCCAGCACCTGCTCCTGGA...TGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS-3UTR CCA 90 bp | CCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACTCCAGGAGCAGGTGCTaGCCGTCCACCATGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PKTQGPRDSLHVSQEEAHSRSRC*PSTMPA Trigger: GGCTGGCATGGTGGACGGCCAGCACCTGCTCCTGGA...GTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGAGTCTGACGGGTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACACAGGTCGGTCAGTCCTaGAGGCAGGACGAGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CRSLTGRDSARQANRTHTQVGQS*RQDERV Trigger: GACCCTCTCGTCCTGCCTCCAGGACTGACCGACCTG...TGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTACCCGTCAGACTCCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
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| CDS-3UTR GCA 90 bp | CAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCATCCTCCAGGAGCAGGTaGTGGCCGTCCACCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGLLACVPRRGTRQTGVPSSRSR*WPSTMP Trigger: TGGCATGGTGGACGGCCAGCACCTGCTCCTGGAGGA...TGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS-3UTR GCA 90 bp | GTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCTCCTCCAGGAGCAGGTaGTGGCCGTCCACCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: VGTVPGRPTAHTQDATHPSSRSR*WPSTMP Trigger: TGGCATGGTGGACGGCCAGCACCTGCTCCTGGAGGA...GGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS-3UTR CCA 90 bp | CCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGCACGGTGGGCTCTGTCTCCAGGGCCTaGCCAAAATGCTCCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PKKRHTPDWGPRSVGTVGSVSRA*PKCSLS Trigger: AGAAAGGGAGCATTTTGGCCAGGCCCTGGAGACAGA...GCCCACCGTGCCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
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| CDS-3UTR TCA 90 bp | CCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCAACATCTTGCTCCCATaGGGAGCTGGGCTGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PRDSLHVSQEEAHARLGSNILLP*GAGLAP Trigger: AGGAGCCAGCCCAGCTCCTCATGGGAGCAAGATGTT...GGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR TCA 90 bp | CAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGGACTAAAATGCTCCCTGTCTaGGGCCCCGGAGACCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: QPHTHRMLLIPKPRAPGTKMLPV*GPGDLP Trigger: GGGGAGGTCTCCGGGGCCTCAGACAGGGAGCATTTT...AGTCCCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR TCA 90 bp | AGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGCATCCCAGGTCTGTGTaGGCCGGGTGTGGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPTAHTQDATHPKTQGPRHPRSV*AGCGSS Trigger: TGAGCTACCACACCCGGCTCACACAGACCTGGGATG...CCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
||
| CDS-3UTR GCA 90 bp | CAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGGACTTCCTCCAGGAGCAGGTaGTGGCCGTCCACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPHTHRMLLIPKPRAPGTSSRSR*WPSTMP Trigger: TGGCATGGTGGACGGCCAGCACCTGCTCCTGGAGGA...AGTCCCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTGAGGGAGGGAATGGTACGGGGACAGACAGCCCAGGAGGTGAATGCCAAATCCTCCAGGAGCAGGTaGTGGCCGTCCACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVREGMVRGQTAQEVNAKSSRSR*WPSTMP Trigger: TGGCATGGTGGACGGCCAGCACCTGCTCCTGGAGGA...TTTGGCATTCACCTCCTGGGCTGTCTGTCCCCGTACCATTCCCTCCCTCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236222.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCTCCAGTGTGATGTCTaGCTGGGTCAGCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRDSARQANRTHTGCYSSLQCDV*LGQQLP Trigger: CGGGAGCTGCTGACCCAGCCAGACATCACACTGGAG...GGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCACTCCAGTGTGATGTCTaGCTGGGTCAGCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPRAPGTPCMCPKKRHTPLQCDV*LGQQLP Trigger: CGGGAGCTGCTGACCCAGCCAGACATCACACTGGAG...TGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCCTCCAGTGTGATGTCTaGCTGGGTCAGCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VGTVPGRPTAHTQDATHPLQCDV*LGQQLP Trigger: CGGGAGCTGCTGACCCAGCCAGACATCACACTGGAG...GGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCGGAGAAAGCGCAGCATaGAGGAGCAGCCTAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRDSLHVSQEEAHARLGSGESAA*RSSLRS Trigger: GGATCTTAGGCTGCTCCTCCATGCTGCGCTTTCTCC...GGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS-3UTR CCA 90 bp | GTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCGATAGTTCCACGGGGTaGACCCCACCTTGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGTVPGRPTAHTQDATHPDSSTG*TPPCKR Trigger: CCTCTTGCAAGGTGGGGTCCACCCCGTGGAACTATC...GGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGTGCTCTACAGAAAGGCAGCTGAAGGGCAGAGGACCCGGGTTTGGTTCCTCCAGTGTGATGTCTaGCTGGGTCAGCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPVLYRKAAEGQRTRVWFLQCDV*LGQQLP Trigger: CGGGAGCTGCTGACCCAGCCAGACATCACACTGGAG...GAACCAAACCCGGGTCCTCTGCCCTTCAGCTGCCTTTCTGTAGAGCACAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGAGCCTTGGCCATGGCTaGCTTCTGGAGCTGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QANRTHTGCYSSQNPGPQSLGHG*LLELLV Trigger: TACAAGCAGCTCCAGAAGTCAGCCATGGCCAAGGCT...CTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR TCA 90 bp | CCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACAGCCTTGGCCATGGCTaGCTTCTGGAGCTGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKTQGPRDSLHVSQEEAHSLGHG*LLELLV Trigger: TACAAGCAGCTCCAGAAGTCAGCCATGGCCAAGGCT...GTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR TCA 90 bp | CGAACTCTTCACCAAGATCGCCTCCAGGTACCAGCCCATCCTCCACCCCGCAGACATAGGCTACCACTGTaGAACCTGGAGGCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLHQDRLQVPAHPPPRRHRLPL*NLEAGR Trigger: TCGTCCTGCCTCCAGGTTTCACAGTGGTAGCCTATG...TCTGCGGGGTGGAGGATGGGCTGGTACCTGGAGGCGATCTTGGTGAAGAGTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142141.3 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGAGTGGTAGCTCATGTCTaGAATCCCAGGTCGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQGPRDSLHVSQEEAHARVVAHV*NPRSVS Trigger: ACTGACCGACCTGGGATTGCAGACATGAGCTACCAC...TCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | CCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGTTACCTCAACACCCTaGGCCCTTAGCTTCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PKTQGPRDSLHVSQEEAHVTSTP*ALSFGT Trigger: TGTCCCGAAGCTAAGGGCCCAGGGTGTTGAGGTAAC...GTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAGATAGTTCCACGGGGTaGACCCCACCTTGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSARQANRTHTGCYSSQDSSTG*TPPCKR Trigger: CCTCTTGCAAGGTGGGGTCCACCCCGTGGAACTATC...TTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGTCCCCTTTCTCCTCGTaGGGCAAGCCATCCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKPRAPGTPCMCPKKRHTSPFSS*GKPSLR Trigger: TCTCAAGGATGGCTTGCCCCACGAGGAGAAAGGGGA...CGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGTCCCCTTTCTCCTCGTaGGGCAAGCCATCCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPTAHTQDATHPKTQGPRSPFSS*GKPSLR Trigger: TCTCAAGGATGGCTTGCCCCACGAGGAGAAAGGGGA...CCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCGCGTGGAGATCAGGCTaGTCCCTGGACTTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVPGRPTAHTQDATHPKTAWRSG*SLDLGF Trigger: GAACCCCAAGTCCAGGGACCAGCCTGATCTCCACGC...GGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCTCCCAGGTTCCTCTaGGAGGAACTGATGTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGQPHTHRMLLIPKPRAPPRFL*EELMLP Trigger: AGGTAACATCAGTTCCTCTCAGAGGAACCTGGGAGG...GGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS-3UTR TCA 90 bp | CGGCTCATTCCAGGAGTGAGGGAGGGAATGGTACGGGGACAGACAGCCCAGGAGAGCCTCTCGTTGCACTaGCAGAATCTTCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLIPGVREGMVRGQTAQESLSLH*QNLLQL Trigger: GAGCTGAAGAAGATTCTGTCAGTGCAACGAGAGGCT...CTCCTGGGCTGTCTGTCCCCGTACCATTCCCTCCCTCACTCCTGGAATGAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236222.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCAGCTCAAAGGCATCATaGCTCGGGTTGGAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSQNPGPQGLLACVPRRGSSKAS*LGLEGA Trigger: AGCTCCCTCCAACCCGAGGCATGATGCCTTTGAGCT...GCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS-3UTR GCA 90 bp | CATCCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCAACCCTGAGTCCCCAGTaGCCAGCTCAAAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPKTQGPRDSLHVSQEEATLSPQ*PAQRHH Trigger: ATGATGCCTTTGAGCTGGGCACTGGGGACTCAGGGT...TGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS-3UTR GCA 90 bp | TGCAGGAGTCTGACGGGTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGCTGACTTCTGGAGCTaGTTGTACAAGCCAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRSLTGRDSARQANRTHTADFWS*LYKPRR Trigger: TCTCCTTGGCTTGTACAAGCAGCTCCAGAAGTCAGC...TGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTACCCGTCAGACTCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | ACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGGACTCCGCCATGGCTGACTTCTaGAGCTGCTTGTACAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAHTQDATHPKTQGPRDSAMADF*SCLYKP Trigger: TGGCTTGTACAAGCAGCTCCAGAAGTCAGCCATGGC...GGAGTCCCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | TTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGGCCATGGCTGACTTCTaGAGCTGCTTGTACAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHVSQEEAHARLGSQECGAMADF*SCLYKP Trigger: TGGCTTGTACAAGCAGCTCCAGAAGTCAGCCATGGC...CCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | CTCATCCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCTGGTCTCTGAGCCTTaGCCATGGCTGACTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPKPRAPGTPCMCPKKRLVSEP*PWLTSG Trigger: TCCAGAAGTCAGCCATGGCCAAGGCTCAGAGACCAG...CCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGGATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | CAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGGACTCTGGTCTCTGAGCCTTaGCCATGGCTGACTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPHTHRMLLIPKPRAPGTLVSEP*PWLTSG Trigger: TCCAGAAGTCAGCCATGGCCAAGGCTCAGAGACCAG...AGTCCCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAAGCCTCTCGTTGCACTaGCAGAATCTTCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGLLACVPRRGTRQTGVPSLSLH*QNLLQL Trigger: GAGCTGAAGAAGATTCTGTCAGTGCAACGAGAGGCT...TGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR TCA 90 bp | TTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGAGCCTCTCGTTGCACTaGCAGAATCTTCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHVSQEEAHARLGSQECGSLSLH*QNLLQL Trigger: GAGCTGAAGAAGATTCTGTCAGTGCAACGAGAGGCT...CCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCAGCCTCTCGTTGCACTaGCAGAATCTTCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQANRTHTGCYSSQNPGPSLSLH*QNLLQL Trigger: GAGCTGAAGAAGATTCTGTCAGTGCAACGAGAGGCT...GGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CCA 90 bp | GGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGATTCTCTTCTCTGAAGTaGTTGGGCGTGGAGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLACVPRRGTRQTGVPGFSSLK*LGVEIR Trigger: CCTGATCTCCACGCCCAACCACTTCAGAGAAGAGAA...TCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
||
| CDS-3UTR GCA 90 bp | CAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCAGGGACTGCTGACTTCTGGAGCTaGTTGTACAAGCCAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPHTHRMLLIPKPRAPGTADFWS*LYKPRR Trigger: TCTCCTTGGCTTGTACAAGCAGCTCCAGAAGTCAGC...AGTCCCTGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| 3UTR CAA 72 bp | GGGCAGAGGACCCGGGTTTGGTTCCCAGCCGCCACATaGGGCGACTTACACTTGTCTATAACACCTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GQRTRVWFPAAT*GDLHLSITPVL Trigger: TAGAACAGGTGTTATAGACAAGTGTAAGTCGCCCAATGTGGCGGCTGGGAACCAAACCCGGGTCCTCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCTCTCCTGAACTTTCACATCTTCAGCTGTCAATTTGGCACATCTGGGGCCCTCCACGGCCACTaGTTCTGTTCTTGGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPLLNFHIFSCQFGTSGALHGH*FCSWLE Trigger: CTCAAGCCAAGAACAGAAGCAGTGGCCGTGGAGGGC...CCCAGATGTGCCAAATTGACAGCTGAAGATGTGAAAGTTCAGGAGAGGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCGTCTCCAAACTCAATTaGGCAGTGTTCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRDSARQANRTHTGCYSSVSKLN*AVFILF Trigger: GAAGAGGATGAACACTGCCCAATTGAGTTTGGAGAC...GGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCGTCTCCAAACTCAATTaGGCAGTGTTCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGQPHTHRMLLIPKPRAVSKLN*AVFILF Trigger: GAAGAGGATGAACACTGCCCAATTGAGTTTGGAGAC...GGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSVL Trigger: GAGCACCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
||
| CDS-3UTR CCA 90 bp | GGAATGGTACGGGGACAGACAGCCCAGGAGGTGAATGCCAAACTAAGCTTTTATTCCCCTTTCTCCTCGTaGGGCAAGCCATCCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GMVRGQTAQEVNAKLSFYSPFSS*GKPSLR Trigger: TCTCAAGGATGGCTTGCCCCACGAGGAGAAAGGGGA...ATAAAAGCTTAGTTTGGCATTCACCTCCTGGGCTGTCTGTCCCCGTACCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236222.2 |
||
| CDS-3UTR TCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCTCTTCTGTTCTTGGCTTaGGTTCTGGTCCTGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TMWLLGFELRTFGRAVGALLFLA*VLVLTS Trigger: AGAAGTCAGGACCAGAACTCAAGCCAAGAACAGAAG...AGCACCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
||
| CDS-3UTR TCA 90 bp | CTTCAGATGCACCAGAAGAGGGCATCAGATCTCACTACAGATGGTTGTGAGCCAAGCCTCTCGTTGCACTaGCAGAATCTTCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQMHQKRASDLTTDGCEPSLSLH*QNLLQL Trigger: GAGCTGAAGAAGATTCTGTCAGTGCAACGAGAGGCT...TGGCTCACAACCATCTGTAGTGAGATCTGATGCCCTCTTCTGGTGCATCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
||
| CDS CCA 90 bp | ACCCTGGGCGGGGGCTCCCTCTTCCCATTAGAGGAAGCTGCAGAGTaGACCTTGGCCCGGGGCTCCTTCCTCCCACGACCTCCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLGGGSLFPLEEAAE*TLARGSFLPRPPWW Trigger: CCACCAGGGAGGTCGTGGGAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGCAGCTTCCTCTAATGGGAAGAGGGAGCCCCCGCCCAGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CCA 90 bp | TGCTGGCCGTCCACCATGCCAGCCTCCTCCAGTGTGATGTCTGGCTaGGTCAGCAGCTCCCGGCCCTCGGGGTTGCCCACCTTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CWPSTMPASSSVMSG*VSSSRPSGLPTFQR Trigger: CCTCTGGAAGGTGGGCAACCCCGAGGGCCGGGAGCTGCTGACCCAGCCAGACATCACACTGGAGGAGGCTGGCATGGTGGACGGCCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS CCA 90 bp | AGCTGGCCGTCCACCATGCCAGCCTCCTCCAGTGTGATGTCTGGCTaGGTCAGCAGCTCCCGGCCCTCGGGGTTGCCCACCTTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWPSTMPASSSVMSG*VSSSRPSGLPTFQR Trigger: CCTCTGGAAGGTGGGCAACCCCGAGGGCCGGGAGCTGCTGACCCAGCCAGACATCACACTGGAGGAGGCTGGCATGGTGGACGGCCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
||
| CDS GCA 90 bp | AGAGAGAACCCTGGGCGGGGGCTCCCTCTTCCCATTAGAGGAAGCTaGAGAGTGGACCTTGGCCCGGGGCTCCTTCCTCCCACGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RENPGRGLPLPIRGS*RVDLGPGLLPPTTS Trigger: GGAGGTCGTGGGAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGCAGCTTCCTCTAATGGGAAGAGGGAGCCCCCGCCCAGGGTTCTCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CCA 90 bp | ACCCTGAGTCCCCAGTGCCCAGCTCAAAGGCATCATGCCTCGGGTTaGAGGGAGCTGCAGAGAGAACCCTGGGCGGGGGCTCCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSPQCPAQRHHASG*RELQREPWAGAPSS Trigger: GGAAGAGGGAGCCCCCGCCCAGGGTTCTCTCTGCAGCTCCCTCCAACCCGAGGCATGATGCCTTTGAGCTGGGCACTGGGGACTCAGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CCA 90 bp | TGTAAGCTGGCCGTCCACCATGCCAGCCTCCTCCAGTGTGATGTCTaGCTGGGTCAGCAGCTCCCGGCCCTCGGGGTTGCCCACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CKLAVHHASLLQCDV*LGQQLPALGVAHLP Trigger: TGGAAGGTGGGCAACCCCGAGGGCCGGGAGCTGCTGACCCAGCCAGACATCACACTGGAGGAGGCTGGCATGGTGGACGGCCAGCTTACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| CDS-3UTR CAA 90 bp | CCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGGCTGCAGAGTGGACCTaGGCCCGGGGCTCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKPRAPGTPCMCPKKRHTAAEWT*ARGSFL Trigger: GAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGCAGC...CGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS GCA 90 bp | CCCAGTGCCCAGCTCAAAGGCATCATGCCTCGGGTTGGAGGGAGCTaGAGAGAGAACCCTGGGCGGGGGCTCCCTCTTCCCATTAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSAQLKGIMPRVGGS*RENPGRGLPLPIRG Trigger: TCCTCTAATGGGAAGAGGGAGCCCCCGCCCAGGGTTCTCTCTGCAGCTCCCTCCAACCCGAGGCATGATGCCTTTGAGCTGGGCACTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CCA 90 bp | GAGTGGACCTTGGCCCGGGGCTCCTTCCTCCCACGACCTCCCTGGTaGCCCATCATTGGGGAGACAACATCTTGCTCCCATGAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EWTLARGSFLPRPPW*PIIGETTSCSHEEL Trigger: CAGCTCCTCATGGGAGCAAGATGTTGTCTCCCCAATGATGGGCCACCAGGGAGGTCGTGGGAGGAAGGAGCCCCGGGCCAAGGTCCACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CCA 90 bp | GCAGAGTGGACCTTGGCCCGGGGCTCCTTCCTCCCACGACCTCCCTaGTGGCCCATCATTGGGGAGACAACATCTTGCTCCCATGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEWTLARGSFLPRPP*WPIIGETTSCSHEE Trigger: CTCCTCATGGGAGCAAGATGTTGTCTCCCCAATGATGGGCCACCAGGGAGGTCGTGGGAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCGAGGGGCACACCACTaGGGACAGCTCTCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PRDSLHVSQEEAHARLGSRGAHH*GQLSST Trigger: GGTGGATGAGAGCTGTCCCAAGTGGTGTGCCCCTCG...GGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CAA 90 bp | AACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCAGGGCTGGTCCCTGGACTaGGGGTTCACATCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NPGPQGLLACVPRRGTRQGWSLD*GFTSQV Trigger: GACCTGGGATGTGAACCCCAAGTCCAGGGACCAGCC...CTGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
||
| CDS CCA 90 bp | ACACCCTGGGCCCTTAGCTTCGGGACATCCTTGGAGGTGAGGGTCTaGGACCCTGAGTCCCCAGTGCCCAGCTCAAAGGCATCATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPWALSFGTSLEVRV*DPESPVPSSKASCL Trigger: GAGGCATGATGCCTTTGAGCTGGGCACTGGGGACTCAGGGTCCCAGACCCTCACCTCCAAGGATGTCCCGAAGCTAAGGGCCCAGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAAGAGGCACACGCCAGACTGGGGTCCCAGGAGTGTGGGCACGGTGTCATCCTCTTCCTCCTaGATGAAGGCCCCAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CPKKRHTPDWGPRSVGTVSSSSS*MKAPGV Trigger: CACCCCTGGGGCCTTCATCAAGGAGGAAGAGGATGA...CACCGTGCCCACACTCCTGGGACCCCAGTCTGGCGTGTGCCTCTTCTTGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCAACCGCACACACACAGGATGCTACTCATCCCAAAACCCAGGGCCCCACGAGGGGCACACCACTaGGGACAGCTCTCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGQPHTHRMLLIPKPRAPRGAHH*GQLSST Trigger: GGTGGATGAGAGCTGTCCCAAGTGGTGTGCCCCTCG...TGGGGCCCTGGGTTTTGGGATGAGTAGCATCCTGTGTGTGTGCGGTTGGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS-3UTR CAA 90 bp | AAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGCCACGAGGGGCACACCACTaGGGACAGCTCTCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KPRAPGTPCMCPKKRHTPRGAHH*GQLSST Trigger: GGTGGATGAGAGCTGTCCCAAGTGGTGTGCCCCTCG...TGGCGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS GCA 90 bp | GTTCACATCCCAGGTCTGTGTGAGCCGGGTGTGGTAGCTCATGTCTaGAATCCCAGGTCGGTCAGTCCTGGAGGCAGGACGAGAGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VHIPGLCEPGVVAHV*NPRSVSPGGRTRGS Trigger: CGACCCTCTCGTCCTGCCTCCAGGACTGACCGACCTGGGATTGCAGACATGAGCTACCACACCCGGCTCACACAGACCTGGGATGTGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
||
| CDS-3UTR CAA 90 bp | CATCCCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACGAGGGGCACACCACTaGGGACAGCTCTCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HPKTQGPRDSLHVSQEEARGAHH*GQLSST Trigger: GGTGGATGAGAGCTGTCCCAAGTGGTGTGCCCCTCG...TGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
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| CDS GCA 90 bp | TCCCGGCCCTCGGGGTTGCCCACCTTCCAGAGGCGAGCCTCTCGTTaGACTGACAGAATCTTCTTCAGCTCCGACTCCACAAAACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SRPSGLPTFQRRASR*TDRIFFSSDSTKPT Trigger: AGTGGGTTTTGTGGAGTCGGAGCTGAAGAAGATTCTGTCAGTGCAACGAGAGGCTCGCCTCTGGAAGGTGGGCAACCCCGAGGGCCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000235543.2 ENSMUST00000236222.2 |
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| CDS-3UTR CAA 90 bp | CCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGTCATCCTCTTCCTCCTaGATGAAGGCCCCAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PKPRAPGTPCMCPKKRHTSSSSS*MKAPGV Trigger: CACCCCTGGGGCCTTCATCAAGGAGGAAGAGGATGA...CGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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| CDS TCA 90 bp | GCCCTCGGGGTTGCCCACCTTCCAGAGGCGAGCCTCTCGTTGCACTaGCAGAATCTTCTTCAGCTCCGACTCCACAAAACCCACTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: ALGVAHLPEASLSLH*QNLLQLRLHKTHCI Trigger: GATACAGTGGGTTTTGTGGAGTCGGAGCTGAAGAAGATTCTGTCAGTGCAACGAGAGGCTCGCCTCTGGAAGGTGGGCAACCCCGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000235543.2 ENSMUST00000236222.2 |
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| CDS CCA 90 bp | ACCTCCCAGGTTCCTCTGAGAGGAACTGATGTTACCTCAACACCCTaGGCCCTTAGCTTCGGGACATCCTTGGAGGTGAGGGTCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TSQVPLRGTDVTSTP*ALSFGTSLEVRVWD Trigger: GTCCCAGACCCTCACCTCCAAGGATGTCCCGAAGCTAAGGGCCCAGGGTGTTGAGGTAACATCAGTTCCTCTCAGAGGAACCTGGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CCA 90 bp | TGTCTCCAGGGCCTGGCCAAAATGCTCCCTTTCTCTTCTCTGAAGTaGTTGGGCGTGGAGATCAGGCTGGTCCCTGGACTTGGGGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CLQGLAKMLPFSSLK*LGVEIRLVPGLGVH Trigger: GTGAACCCCAAGTCCAGGGACCAGCCTGATCTCCACGCCCAACCACTTCAGAGAAGAGAAAGGGAGCATTTTGGCCAGGCCCTGGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
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| CDS-3UTR CAA 90 bp | TGCAGGAGTCTGACGGGTAGGGACAGTGCCAGGCAGGCCAACCGCACACACACAGGTCTCCAAACTCAATaGGGCAGTGTTCATCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CRSLTGRDSARQANRTHTGLQTQ*GSVHPL Trigger: AAGAGGATGAACACTGCCCAATTGAGTTTGGAGACC...TGTGTGTGTGCGGTTGGCCTGCCTGGCACTGTCCCTACCCGTCAGACTCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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| CDS-3UTR CAA 90 bp | CCAAAACCCAGGGCCCCAGGGACTCCTTGCATGTGTCCCAAGAAGAGGCACACGGGTCTCCAAACTCAATaGGGCAGTGTTCATCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PKPRAPGTPCMCPKKRHTGLQTQ*GSVHPL Trigger: AAGAGGATGAACACTGCCCAATTGAGTTTGGAGACC...CGTGTGCCTCTTCTTGGGACACATGCAAGGAGTCCCTGGGGCCCTGGGTTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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| CDS TCA 90 bp | CTCCTTTCTTCTCAGGTAGCTGCTCCAGAACCTCCCAGGTTCCTCTaGGAGGAACTGATGTTACCTCAACACCCTGGGCCCTTAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSQVAAPEPPRFL*EELMLPQHPGPLAS Trigger: CGAAGCTAAGGGCCCAGGGTGTTGAGGTAACATCAGTTCCTCTCAGAGGAACCTGGGAGGTTCTGGAGCAGCTACCTGAGAAGAAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS-3UTR CAA 90 bp | CTTCAGATGCACCAGAAGAGGGCATCAGATCTCACTACAGATGGTTGTGAGCCAGCTTCTGTTCTTGGCTaGAGTTCTGGTCCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQMHQKRASDLTTDGCEPASVLG*SSGPDF Trigger: GAAGTCAGGACCAGAACTCAAGCCAAGAACAGAAGC...TGGCTCACAACCATCTGTAGTGAGATCTGATGCCCTCTTCTGGTGCATCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235543.2 |
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| CDS CCA 72 bp | GCCGTCCACCATGCCAGCCTCCTCCAGTGTGATGTCTaGCTGGGTCAGCAGCTCCCGGCCCTCGGGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVHHASLLQCDV*LGQQLPALGVA Trigger: GGCAACCCCGAGGGCCGGGAGCTGCTGACCCAGCCAGACATCACACTGGAGGAGGCTGGCATGGTGGACGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000235543.2 ENSMUST00000236222.2 |
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| CDS CAA 90 bp | GGCGGGGGCTCCCTCTTCCCATTAGAGGAAGCTGCAGAGTGGACCTaGGCCCGGGGCTCCTTCCTCCCACGACCTCCCTGGTGGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: GGGSLFPLEEAAEWT*ARGSFLPRPPWWPI Trigger: GATGGGCCACCAGGGAGGTCGTGGGAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGCAGCTTCCTCTAATGGGAAGAGGGAGCCCCCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS GCA 72 bp | CCTGGGCGGGGGCTCCCTCTTCCCATTAGAGGAAGCTaGAGAGTGGACCTTGGCCCGGGGCTCCTTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRGLPLPIRGS*RVDLGPGLLPP Trigger: GGGAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGCAGCTTCCTCTAATGGGAAGAGGGAGCCCCCGCCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CCA 72 bp | TCCACCATGCCAGCCTCCTCCAGTGTGATGTCTGGCTaGGTCAGCAGCTCCCGGCCCTCGGGGTTGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: STMPASSSVMSG*VSSSRPSGLPT Trigger: GGTGGGCAACCCCGAGGGCCGGGAGCTGCTGACCCAGCCAGACATCACACTGGAGGAGGCTGGCATGGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000235543.2 ENSMUST00000236222.2 |
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| CDS CCA 72 bp | CCCCAGTGCCCAGCTCAAAGGCATCATGCCTCGGGTTaGAGGGAGCTGCAGAGAGAACCCTGGGCGGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PQCPAQRHHASG*RELQREPWAGA Trigger: AGCCCCCGCCCAGGGTTCTCTCTGCAGCTCCCTCCAACCCGAGGCATGATGCCTTTGAGCTGGGCACTGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CAA 72 bp | TCCCCAGTGCCCAGCTCAAAGGCATCATGCCTCGGGTaGGAGGGAGCTGCAGAGAGAACCCTGGGCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPVPSSKASCLG*EGAAERTLGGG Trigger: GCCCCCGCCCAGGGTTCTCTCTGCAGCTCCCTCCAACCCGAGGCATGATGCCTTTGAGCTGGGCACTGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CAA 90 bp | TGGCCCGGGGCTCCTTCCTCCCACGACCTCCCTGGTGGCCCATCATaGGGGAGACAACATCTTGCTCCCATGAGGAGCTGGGCTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WPGAPSSHDLPGGPS*GRQHLAPMRSWAGS Trigger: GGAGCCAGCCCAGCTCCTCATGGGAGCAAGATGTTGTCTCCCCAATGATGGGCCACCAGGGAGGTCGTGGGAGGAAGGAGCCCCGGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CAA 90 bp | GACCCTGAGTCCCCAGTGCCCAGCTCAAAGGCATCATGCCTCGGGTaGGAGGGAGCTGCAGAGAGAACCCTGGGCGGGGGCTCCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DPESPVPSSKASCLG*EGAAERTLGGGSLF Trigger: GAAGAGGGAGCCCCCGCCCAGGGTTCTCTCTGCAGCTCCCTCCAACCCGAGGCATGATGCCTTTGAGCTGGGCACTGGGGACTCAGGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS GCA 72 bp | CAGCTCAAAGGCATCATGCCTCGGGTTGGAGGGAGCTaGAGAGAGAACCCTGGGCGGGGGCTCCCTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QLKGIMPRVGGS*RENPGRGLPLP Trigger: GGGAAGAGGGAGCCCCCGCCCAGGGTTCTCTCTGCAGCTCCCTCCAACCCGAGGCATGATGCCTTTGAGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CCA 72 bp | GGGGGCTCCCTCTTCCCATTAGAGGAAGCTGCAGAGTaGACCTTGGCCCGGGGCTCCTTCCTCCCACGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GGSLFPLEEAAE*TLARGSFLPRP Trigger: AGGTCGTGGGAGGAAGGAGCCCCGGGCCAAGGTCCACTCTGCAGCTTCCTCTAATGGGAAGAGGGAGCCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CCA 72 bp | ACCTTGGCCCGGGGCTCCTTCCTCCCACGACCTCCCTaGTGGCCCATCATTGGGGAGACAACATCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLARGSFLPRPP*WPIIGETTSCS Trigger: GGAGCAAGATGTTGTCTCCCCAATGATGGGCCACCAGGGAGGTCGTGGGAGGAAGGAGCCCCGGGCCAAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CAA 90 bp | TCCAGTGTGATGTCTGGCTGGGTCAGCAGCTCCCGGCCCTCGGGGTaGCCCACCTTCCAGAGGCGAGCCTCTCGTTGCACTGACAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSVMSGWVSSSRPSG*PTFQRRASRCTDRI Trigger: GATTCTGTCAGTGCAACGAGAGGCTCGCCTCTGGAAGGTGGGCAACCCCGAGGGCCGGGAGCTGCTGACCCAGCCAGACATCACACTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000235543.2 ENSMUST00000236222.2 |
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| CDS GCA 72 bp | CCTCCCTGGTGGCCCATCATTGGGGAGACAACATCTTaGTCCCATGAGGAGCTGGGCTGGCTCCTGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPWWPIIGETTS*SHEELGWLLVR Trigger: CCTGACCAGGAGCCAGCCCAGCTCCTCATGGGAGCAAGATGTTGTCTCCCCAATGATGGGCCACCAGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CCA 72 bp | TTGGCCCGGGGCTCCTTCCTCCCACGACCTCCCTGGTaGCCCATCATTGGGGAGACAACATCTTGCTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LARGSFLPRPPW*PIIGETTSCSH Trigger: ATGGGAGCAAGATGTTGTCTCCCCAATGATGGGCCACCAGGGAGGTCGTGGGAGGAAGGAGCCCCGGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CAA 72 bp | ACCTCAACACCCTGGGCCCTTAGCTTCGGGACATCCTaGGAGGTGAGGGTCTGGGACCCTGAGTCCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSTPWALSFGTS*EVRVWDPESPV Trigger: CACTGGGGACTCAGGGTCCCAGACCCTCACCTCCAAGGATGTCCCGAAGCTAAGGGCCCAGGGTGTTGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CAA 72 bp | AGTGGTTGGGCGTGGAGATCAGGCTGGTCCCTGGACTaGGGGTTCACATCCCAGGTCTGTGTGAGCCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SGWAWRSGWSLD*GFTSQVCVSRV Trigger: CACCCGGCTCACACAGACCTGGGATGTGAACCCCAAGTCCAGGGACCAGCCTGATCTCCACGCCCAACCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
||
| CDS TCA 72 bp | CTCTCTCCCCTTTCTCCTCGTGGGGCAAGCCATCCTTaGGAGCCAACTGAGGCGCAGCTGGTCTCTGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSPLSPRGASHP*EPTEAQLVSEP Trigger: AGGCTCAGAGACCAGCTGCGCCTCAGTTGGCTCTCAAGGATGGCTTGCCCCACGAGGAGAAAGGGGAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 ENSMUST00000154731.3 ENSMUST00000236222.2 |
||
| CDS CCA 72 bp | CCTTACTCCCCACCAGGTTTCGGAGAAAGCGCAGCATaGAGGAGCAGCCTAAGATCCGTGACCGAGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PYSPPGFGESAA*RSSLRSVTEGS Trigger: GGACCCCTCGGTCACGGATCTTAGGCTGCTCCTCCATGCTGCGCTTTCTCCGAAACCTGGTGGGGAGTAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CAA 72 bp | TCCCATGAGGAGCTGGGCTGGCTCCTGGTCAGGGGCTaGTTAGTGCTCTTAGAACCGCCCTTACTCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SHEELGWLLVRG*LVLLEPPLLPT Trigger: GGTGGGGAGTAAGGGCGGTTCTAAGAGCACTAACAAGCCCCTGACCAGGAGCCAGCCCAGCTCCTCATGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CAA 72 bp | GCTCCTTCCTCCCACGACCTCCCTGGTGGCCCATCATaGGGGAGACAACATCTTGCTCCCATGAGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: APSSHDLPGGPS*GRQHLAPMRSW Trigger: CCAGCTCCTCATGGGAGCAAGATGTTGTCTCCCCAATGATGGGCCACCAGGGAGGTCGTGGGAGGAAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS TCA 72 bp | GTGGCCCATCATTGGGGAGACAACATCTTGCTCCCATaGGGAGCTGGGCTGGCTCCTGGTCAGGGGCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VAHHWGDNILLP*GAGLAPGQGLV Trigger: AACAAGCCCCTGACCAGGAGCCAGCCCAGCTCCTCATGGGAGCAAGATGTTGTCTCCCCAATGATGGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CCA 72 bp | ACCCACTGTAAGCATCCTTGTTCTGTCTCCAGGGCCTaGCCAAAATGCTCCCTGTCTGAGGCCCCGGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: THCKHPCSVSRA*PKCSLSEAPET Trigger: GGTCTCCGGGGCCTCAGACAGGGAGCATTTTGGCCAGGCCCTGGAGACAGAACAAGGATGCTTACAGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
||
| CDS CAA 90 bp | TTGAGGTCTCCAAACTCAATTGGGCAGTGTTCATCCTCTTCCTCCTaGATGAAGGCCCCAGGGGTGAGCGCCAGTGGTCCCGGAACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRSPNSIGQCSSSSS*MKAPGVSASGPGTH Trigger: GTGGGTTCCGGGACCACTGGCGCTCACCCCTGGGGCCTTCATCAAGGAGGAAGAGGATGAACACTGCCCAATTGAGTTTGGAGACCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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| CDS CAA 90 bp | CTCCAGGGCCTGGCCAAAATGCTCCCTTTCTCTTCTCTGAAGTGGTaGGGCGTGGAGATCAGGCTGGTCCCTGGACTTGGGGTTCACATC | + |
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Preference number: 6 (lower is better) Translates to: LQGLAKMLPFSSLKW*GVEIRLVPGLGVHI Trigger: GATGTGAACCCCAAGTCCAGGGACCAGCCTGATCTCCACGCCCAACCACTTCAGAGAAGAGAAAGGGAGCATTTTGGCCAGGCCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
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| CDS TCA 72 bp | TCTCAGGTAGCTGCTCCAGAACCTCCCAGGTTCCTCTaGGAGGAACTGATGTTACCTCAACACCCTGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SQVAAPEPPRFL*EELMLPQHPGP Trigger: GGGCCCAGGGTGTTGAGGTAACATCAGTTCCTCTCAGAGGAACCTGGGAGGTTCTGGAGCAGCTACCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS TCA 72 bp | TCCACGGGGTGGACCCCACCTTGCAAGAGGACGGCTTaGGGTCTCCAAACTCAATTGGGCAGTGTTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: STGWTPPCKRTA*GLQTQLGSVHP Trigger: AGGATGAACACTGCCCAATTGAGTTTGGAGACCTCAAGCCGTCCTCTTGCAAGGTGGGGTCCACCCCGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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| CDS TCA 72 bp | CTGAGGCGCAGCTGGTCTCTGAGCCTTGGCCATGGCTaGCTTCTGGAGCTGCTTGTACAAGCCAAGGAGATA | + |
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Preference number: 6 (lower is better) Translates to: LRRSWSLSLGHG*LLELLVQAKEI Trigger: TATCTCCTTGGCTTGTACAAGCAGCTCCAGAAGTCAGCCATGGCCAAGGCTCAGAGACCAGCTGCGCCTCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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| CDS CCA 72 bp | GGGGAGACAACATCTTGCTCCCATGAGGAGCTGGGCTaGCTCCTGGTCAGGGGCTTGTTAGTGCTCTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GETTSCSHEELG*LLVRGLLVLLE Trigger: TTCTAAGAGCACTAACAAGCCCCTGACCAGGAGCCAGCCCAGCTCCTCATGGGAGCAAGATGTTGTCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CCA 72 bp | GGCCTGGCCAAAATGCTCCCTTTCTCTTCTCTGAAGTaGTTGGGCGTGGAGATCAGGCTGGTCCCTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: GLAKMLPFSSLK*LGVEIRLVPGL Trigger: AAGTCCAGGGACCAGCCTGATCTCCACGCCCAACCACTTCAGAGAAGAGAAAGGGAGCATTTTGGCCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
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| CDS CAA 72 bp | TTCCACGGGGTGGACCCCACCTTGCAAGAGGACGGCTaGAGGTCTCCAAACTCAATTGGGCAGTGTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: FHGVDPTLQEDG*RSPNSIGQCSS Trigger: GGATGAACACTGCCCAATTGAGTTTGGAGACCTCAAGCCGTCCTCTTGCAAGGTGGGGTCCACCCCGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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| CDS CAA 72 bp | CTGGCCAAAATGCTCCCTTTCTCTTCTCTGAAGTGGTaGGGCGTGGAGATCAGGCTGGTCCCTGGACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LAKMLPFSSLKW*GVEIRLVPGLG Trigger: CCCAAGTCCAGGGACCAGCCTGATCTCCACGCCCAACCACTTCAGAGAAGAGAAAGGGAGCATTTTGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122106.9 |
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| CDS CCA 72 bp | GTTCCTCTGAGAGGAACTGATGTTACCTCAACACCCTaGGCCCTTAGCTTCGGGACATCCTTGGAGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VPLRGTDVTSTP*ALSFGTSLEVR Trigger: CCTCACCTCCAAGGATGTCCCGAAGCTAAGGGCCCAGGGTGTTGAGGTAACATCAGTTCCTCTCAGAGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053683.7 |
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| CDS CCA 72 bp | CTTGCAAGAGGACGGCTTGAGGTCTCCAAACTCAATTaGGCAGTGTTCATCCTCTTCCTCCTTGATGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LARGRLEVSKLN*AVFILFLLDEG Trigger: GCCTTCATCAAGGAGGAAGAGGATGAACACTGCCCAATTGAGTTTGGAGACCTCAAGCCGTCCTCTTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053683.7 ENSMUST00000122106.9 |
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