Pregenerated sensors for GGN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031493Ensembl transcript IDs: ENSMUST00000098609.4, ENSMUST00000208288.2, ENSMUST00000208330.2, ENSMUST00000209019.2
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCAGGTGGTTGGTAGGTGTGCTCAGCCAGGCAGACACGTTGCGTaGCAGCCGACGGTGACGACGTTGATGGCGGCAGTAGCACTTGCA | + |
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Preference number: 1 (lower is better) Translates to: AQVVGRCAQPGRHVA*QPTVTTLMAAVALA Trigger: TGCAAGTGCTACTGCCGCCATCAACGTCGTCACCGTCGGCTGCCACGCAACGTGTCTGCCTGGCTGAGCACACCTACCAACCACCTGAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| 3UTR GCA 90 bp | CTTGCAGGGACAGGAATTAAGCACCTCGAAAGGCGGCCAGTGCCTTaGTGTTCCCTTGTTAGAGGCCCCAGCTGTGGAGGTTCCGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LAGTGIKHLERRPVP*CSLVRGPSCGGSVA Trigger: AGCAACGGAACCTCCACAGCTGGGGCCTCTAACAAGGGAACAGCAAGGCACTGGCCGCCTTTCGAGGTGCTTAATTCCTGTCCCTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCAGCTTGACAGTGGCCACCCACGGTGGCTCGCTCAGGTGGTTGGTAGGTTATTGGCGAGGAGGGTaGGGCCGAGGGGGTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PASLTVATHGGSLRWLVGYWRGG*GRGGWA Trigger: TGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATA...ACCTACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACTGTCAAGCTGGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGGTTGGGCAGTCGCACTCAGGTAGAATGGGTGGCCTGCAAGTCGTAGTGGGGAGCCAGCCAGCTTaGCAGTGGCCACCCACGGTG | + |
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Preference number: 2 (lower is better) Translates to: EGVGQSHSGRMGGLQVVVGSQPA*QWPPTV Trigger: CACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCCC...CACTACGACTTGCAGGCCACCCATTCTACCTGAGTGCGACTGCCCAACCCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| 3UTR CAA 90 bp | GCTCAGCCAGGCAGACACGTTGCGTGGCAGCCGACGGTGACGACGTaGATGGCGGCAGTAGCACTTGCAGGGACAGGAATTAAGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: AQPGRHVAWQPTVTT*MAAVALAGTGIKHL Trigger: GAGGTGCTTAATTCCTGTCCCTGCAAGTGCTACTGCCGCCATCAACGTCGTCACCGTCGGCTGCCACGCAACGTGTCTGCCTGGCTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| 3UTR TCA 72 bp | AGTGCTCCAGGCCCGCTACTAGGGAGCCAGCCAGCTTaGCAGTGGCCACCCACGGTGGCTCGCTCAGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SAPGPLLGSQPA*QWPPTVARSGG Trigger: ACCACCTGAGCGAGCCACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCCCTAGTAGCGGGCCTGGAGCACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCCAGCCAGCTTGACAGTGGCCACCCACGGTGGCTCGCTCAGGTGGTTGGTAGCTGTGGAGGTTCCGTaGCTACCACCGCCACCCCCT | + |
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Preference number: 3 (lower is better) Translates to: EPASLTVATHGGSLRWLVAVEVP*LPPPPP Trigger: AGGGGGTGGCGGTGGTAGCAACGGAACCTCCACAGC...TACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| 3UTR GCA 72 bp | ACAGGAATTAAGCACCTCGAAAGGCGGCCAGTGCCTTaGTGTTCCCTTGTTAGAGGCCCCAGCTGTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: TGIKHLERRPVP*CSLVRGPSCGG Trigger: ACCTCCACAGCTGGGGCCTCTAACAAGGGAACAGCAAGGCACTGGCCGCCTTTCGAGGTGCTTAATTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTTGCCGGGGCAGCGGTaGCAGCGGGCGGAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLPGQR*QRAEAW Trigger: CCAAGCCTCCGCCCGCTGCCACCGCTGCCCCGGCAA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCGTCGGAGGTGGGGCTaGGGCCCTCAGGACCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHRRRWG*GPQDRV Trigger: GACCCGGTCCTGAGGGCCCCAGCCCCACCTCCGACG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGCGCCGGTGGTGGCGTaGCTGGTGGCGTGGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRAPVVA*LVAWVV Trigger: CACCACCCACGCCACCAGCCACGCCACCACCGGCGC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TCGAAAGGCGGCCAGTGCCTTGCTGTTCCCTTGTTAGAGGCCCCAGCTGTGGAGCGTCGGAGGTGGGGCTaGGGCCCTCAGGACCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKGGQCLAVPLLEAPAVERRRWG*GPQDRV Trigger: GACCCGGTCCTGAGGGCCCCAGCCCCACCTCCGACG...CTCCACAGCTGGGGCCTCTAACAAGGGAACAGCAAGGCACTGGCCGCCTTTCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGCGTGGCTGGTGGCGTaGGTGGTGGTGGCGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHAWLVA*VVVAAE Trigger: CTCTGCCGCCACCACCACCCACGCCACCAGCCACGC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGCGTGGCTGGTGGCGTaGGTGGTGGTGGCGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRAWLVA*VVVAAE Trigger: CTCTGCCGCCACCACCACCCACGCCACCAGCCACGC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTGTGGTGTGGGTGGTaGCGCCGGTGGTGGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLWCGW*RRWWRG Trigger: GCCACGCCACCACCGGCGCCACCACCCACACCACAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGGGAGCCAGCCAGCTTaGCAGTGGCCACCCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHGSQPA*QWPPTV Trigger: CACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCCC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGGGAGCCAGCCAGCTTaGCAGTGGCCACCCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRGSQPA*QWPPTV Trigger: CACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCCC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | CCAGCCAGCTTGACAGTGGCCACCCACGGTGGCTCGCTCAGGTGGTTGGTAGGTGCGCGGTCTGAGGCCTaGTCTTTTCGGGAACCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PASLTVATHGGSLRWLVGARSEA*SFREPP Trigger: CGGGGGTTCCCGAAAAGAGCAGGCCTCAGACCGCGC...ACCTACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACTGTCAAGCTGGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCCACTAGAGGCGTCCTaGGGGAGTCGGAGGCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHPLEAS*GSRRRG Trigger: ACCGCGCCTCCGACTCCCGCAGGACGCCTCTAGTGG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | CTCAGGTGGTTGGTAGGTGTGCTCAGCCAGGCAGACACGTTGCGTGGCAGCCGACCACTAGAGGCGTCCTaGGGGAGTCGGAGGCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRWLVGVLSQADTLRGSRPLEAS*GSRRRG Trigger: ACCGCGCCTCCGACTCCCGCAGGACGCCTCTAGTGG...TCGGCTGCCACGCAACGTGTCTGCCTGGCTGAGCACACCTACCAACCACCTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CCA 90 bp | GCGGCAGTAGCACTTGCAGGGACAGGAATTAAGCACCTCGAAAGGCGGCCAGTGTTGCCGGGGCAGCGGTaGCAGCGGGCGGAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAVALAGTGIKHLERRPVLPGQR*QRAEAW Trigger: CCAAGCCTCCGCCCGCTGCCACCGCTGCCCCGGCAA...CACTGGCCGCCTTTCGAGGTGCTTAATTCCTGTCCCTGCAAGTGCTACTGCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGTCGGAGGTGGGGCTaGGGCCCTCAGGACCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSRRRWG*GPQDRV Trigger: GACCCGGTCCTGAGGGCCCCAGCCCCACCTCCGACG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGCGCCGGTGGTGGCGTaGCTGGTGGCGTGGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSAPVVA*LVAWVV Trigger: CACCACCCACGCCACCAGCCACGCCACCACCGGCGC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTGGTGGCTGTGGTGTaGGTGGTGGCGCCGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLVAVV*VVAPVV Trigger: CACCACCGGCGCCACCACCCACACCACAGCCACCAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCTTGGAGGGTCACCCTaGCCACGATGGCTCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLGGSP*PRWLAS Trigger: GGAGGCGAGCCATCGTGGTCAGGGTGACCCTCCAAG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTTGGAGGGTCACCCTaGCCACGATGGCTCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLGGSP*PRWLAS Trigger: GGAGGCGAGCCATCGTGGTCAGGGTGACCCTCCAAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTTGGGGCATTGGCGGTaGCAGCTCAGCGGTGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLGHWR*QLSGGG Trigger: ACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTTGGGGCATTGGCGGTaGCAGCTCAGCGGTGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLGHWR*QLSGGG Trigger: ACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCGCCACCCCCTCCACTaGTGCTGTCAGTCACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHRHPLH*CCQSPE Trigger: CTCCGGTGACTGACAGCAGCAGTGGAGGGGGTGGCG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGCGCGGTCTGAGGCCTaGTCTTTTCGGGAACCCCCG | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHARSEA*SFREPP Trigger: CGGGGGTTCCCGAAAAGAGCAGGCCTCAGACCGCGC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGCGCGGTCTGAGGCCTaGTCTTTTCGGGAACCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRARSEA*SFREPP Trigger: CGGGGGTTCCCGAAAAGAGCAGGCCTCAGACCGCGC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCTCGAGCCAGGCGCATaGCAGGGGATGAGGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLEPGA*QGMRGS Trigger: TGACCCCCTCATCCCCTGCCATGCGCCTGGCTCGAG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTCGAGCCAGGCGCATaGCAGGGGATGAGGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLEPGA*QGMRGS Trigger: TGACCCCCTCATCCCCTGCCATGCGCCTGGCTCGAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTCCCAAGGGACGAGTaGCTCCAGGAGGTTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLPRDE*LQEVGA Trigger: GGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGCGTGGCTGGTGGCGTaGGTGGTGGTGGCGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSAWLVA*VVVAAE Trigger: CTCTGCCGCCACCACCACCCACGCCACCAGCCACGC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCTGTGGTGTGGGTGGTaGCGCCGGTGGTGGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSLWCGW*RRWWRG Trigger: GCCACGCCACCACCGGCGCCACCACCCACACCACAG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCCTTGGGAGCGCTGGTaGCTGTGGTGTGGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRPWERW*LWCGWW Trigger: CCACCACCCACACCACAGCCACCAGCGCTCCCAAGG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | TGTTCCCTTGTTAGAGGCCCCAGCTGTGGAGGTTCCGTTGCTACCACCGCCACCCTTGGAGGGTCACCCTaGCCACGATGGCTCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: CSLVRGPSCGGSVATTATLGGSP*PRWLAS Trigger: GGAGGCGAGCCATCGTGGTCAGGGTGACCCTCCAAG...GGTGGCGGTGGTAGCAACGGAACCTCCACAGCTGGGGCCTCTAACAAGGGAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTGTGGAGGTTCCGTTaGTACCACCGCCACCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLWRFR*YHRHPL Trigger: GAGGGGGTGGCGGTGGTAGCAACGGAACCTCCACAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCCACTAGAGGCGTCCTaGGGGAGTCGGAGGCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSPLEAS*GSRRRG Trigger: ACCGCGCCTCCGACTCCCGCAGGACGCCTCTAGTGG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCCCACTAGAGGCGTCCTaGGGGAGTCGGAGGCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TCRLGTLLARRVRPRGLGPLEAS*GSRRRG Trigger: ACCGCGCCTCCGACTCCCGCAGGACGCCTCTAGTGG...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208288.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCAGTGGCCACCCACGGTaGCTCGCTCAGGTGGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRSGHPR*LAQVVG Trigger: ACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACT...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACAGTGGCCACCCACGGTaGCTCGCTCAGGTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHSGHPR*LAQVVG Trigger: ACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACT...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGTGGCTCCAGGAGGTTaGGGCCCTTGCTTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHVAPGG*GPCFRT Trigger: GGTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCAC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTGGCGTGGGTGGTGGTaGCGGCAGAGGAGGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHWRGWW*RQRRYL Trigger: CAGATACCTCCTCTGCCGCCACCACCACCCACGCCA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTGGCGTGGGTGGTGGTaGCGGCAGAGGAGGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRWRGWW*RQRRYL Trigger: CAGATACCTCCTCTGCCGCCACCACCACCCACGCCA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTGGTGGCGTGGGTGGTaGTGGCGGCAGAGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHWWRGW*WRQRRY Trigger: ATACCTCCTCTGCCGCCACCACCACCCACGCCACCA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTGGTGGCGTGGGTGGTaGTGGCGGCAGAGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRWWRGW*WRQRRY Trigger: ATACCTCCTCTGCCGCCACCACCACCCACGCCACCA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTGGATGTGTCTGACCTaGCCTGGGTGGAGGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHWMCLT*PGWRGS Trigger: GGATCCCCTCCACCCAGGTCAGGTCAGACACATCCA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTGGATGTGTCTGACCTaGCCTGGGTGGAGGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRWMCLT*PGWRGS Trigger: GGATCCCCTCCACCCAGGTCAGGTCAGACACATCCA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTTTGGGGCATTGGCGGTaGCAGCTCAGCGGTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSLGHWR*QLSGGG Trigger: ACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAA...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCTTGGGGCATTGGCGGTaGCAGCTCAGCGGTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCRLGTLLARRVRPRGLGLGHWR*QLSGGG Trigger: ACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAA...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208288.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCACCCCCTCCACTaGTGCTGTCAGTCACCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSRHPLH*CCQSPE Trigger: CTCCGGTGACTGACAGCAGCAGTGGAGGGGGTGGCG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCCGCCACCCCCTCCACTaGTGCTGTCAGTCACCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCRLGTLLARRVRPRGLGRHPLH*CCQSPE Trigger: CTCCGGTGACTGACAGCAGCAGTGGAGGGGGTGGCG...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGCGCGGTCTGAGGCCTaGTCTTTTCGGGAACCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSARSEA*SFREPP Trigger: CGGGGGTTCCCGAAAAGAGCAGGCCTCAGACCGCGC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTCTTTTTCGGTCAGTTaGCGGGGCAGCGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHSFSVS*RGSGGS Trigger: GCTGCCACCGCTGCCCCGGCAACTGACCGAAAAAGA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTCTTTTTCGGTCAGTTaGCGGGGCAGCGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRSFSVS*RGSGGS Trigger: GCTGCCACCGCTGCCCCGGCAACTGACCGAAAAAGA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGGTGGCTCGCTCAGGTaGTTGGTAGGTGTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHGGSLR*LVGVLS Trigger: GCTGAGCACACCTACCAACCACCTGAGCGAGCCACC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCTCGAGCCAGGCGCATaGCAGGGGATGAGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSLEPGA*QGMRGS Trigger: TGACCCCCTCATCCCCTGCCATGCGCCTGGCTCGAG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCTCCCAAGGGACGAGTaGCTCCAGGAGGTTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSLPRDE*LQEVGA Trigger: GGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGAG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGTGTCTGACCTGACCTaGGTGGAGGGGATCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRVSDLT*VEGIPK Trigger: CTTGGGGATCCCCTCCACCCAGGTCAGGTCAGACAC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGTGTCTGACCTGACCTaGGTGGAGGGGATCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHVSDLT*VEGIPK Trigger: CTTGGGGATCCCCTCCACCCAGGTCAGGTCAGACAC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCCTTGGGAGCGCTGGTaGCTGTGGTGTGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSPWERW*LWCGWW Trigger: CCACCACCCACACCACAGCCACCAGCGCTCCCAAGG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| 3UTR CAA 72 bp | TTGACAGTGGCCACCCACGGTGGCTCGCTCAGGTGGTaGGTAGGTGTGCTCAGCCAGGCAGACACGTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTVATHGGSLRW*VGVLSQADTLR Trigger: ACGCAACGTGTCTGCCTGGCTGAGCACACCTACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACTGTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
||
| 3UTR CAA 72 bp | GGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTaGGGCAGTCGCACTCAGGTAGAATGGGTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTLLARRVRPRG*GSRTQVEWVAC Trigger: GCAGGCCACCCATTCTACCTGAGTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGAAGATGGATGTGTCTaGCCTGACCTGGGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHEDGCV*PDLGGG Trigger: CCCTCCACCCAGGTCAGGTCAGACACATCCATCTTC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGAAGATGGATGTGTCTaGCCTGACCTGGGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSREDGCV*PDLGGG Trigger: CCCTCCACCCAGGTCAGGTCAGACACATCCATCTTC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCTGTGGAGGTTCCGTTaGTACCACCGCCACCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSLWRFR*YHRHPL Trigger: GAGGGGGTGGCGGTGGTAGCAACGGAACCTCCACAG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCCGAGGGGGTTGGGCAGTCGCACTCAGGTAGAATGGGTGGCCTGCAAGTCGCGGACGGCTCCGACTaGACGTTCCCCATTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EAEGVGQSHSGRMGGLQVADGSD*TFPIFE Trigger: TTCAAAAATGGGGAACGTGCAGTCGGAGCCGTCCGC...GACTTGCAGGCCACCCATTCTACCTGAGTGCGACTGCCCAACCCCCTCGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTCAGCGGTGGCGGTTaGTGGAACTTGGGATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLSGGG*WNLGCD Trigger: GTCACATCCCAAGTTCCAGCAACCGCCACCGCTGAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCTCAGCGGTGGCGGTTaGTGGAACTTGGGATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLSGGG*WNLGCD Trigger: GTCACATCCCAAGTTCCAGCAACCGCCACCGCTGAG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGATGTGGGGGACAAATaGGGCCCCGACTTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRDVGDK*GPDLKV Trigger: CACCTTCAAGTCGGGGCCCCATTTGTCCCCCACATC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTTGAACCTGGGAAGGTaGTGTAAGGGGGCGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLNLGR*CKGAAV Trigger: TACCGCCGCCCCCTTACACCACCTTCCCAGGTTCAA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTTGAACCTGGGAAGGTaGTGTAAGGGGGCGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLNLGR*CKGAAV Trigger: TACCGCCGCCCCCTTACACCACCTTCCCAGGTTCAA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCAGGAGGTATCTGCTGTaGACTTGGAGGCACTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRRRYLL*TWRHWA Trigger: CGCCCAGTGCCTCCAAGTCCACAGCAGATACCTCCT...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCAGTTGGGGATAAAGTaGAGGGAGGGGTGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHQLGIK*REGWEP Trigger: TGGCTCCCACCCCTCCCTCCACTTTATCCCCAACTG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGGATGTGACTGTGGCTaGAGTTGCAGCTGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHGCDCG*SCSWDL Trigger: CAGGTCCCAGCTGCAACTCCAGCCACAGTCACATCC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGGATGTGACTGTGGCTaGAGTTGCAGCTGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRGCDCG*SCSWDL Trigger: CAGGTCCCAGCTGCAACTCCAGCCACAGTCACATCC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCGAGGGGGTTGGGCAGTCGCACTCAGGTAGAATGGGTGGCCTGCAAGTCGCGGTTGCTGGAACTTaGGATGTGACTGTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAEGVGQSHSGRMGGLQVAVAGT*DVTVAG Trigger: TCCAGCCACAGTCACATCCCAAGTTCCAGCAACCGC...GACTTGCAGGCCACCCATTCTACCTGAGTGCGACTGCCCAACCCCCTCGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
||
| 3UTR CAA 72 bp | GGCAGACACGTTGCGTGGCAGCCGACGGTGACGACGTaGATGGCGGCAGTAGCACTTGCAGGGACAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GRHVAWQPTVTT*MAAVALAGTGI Trigger: AATTCCTGTCCCTGCAAGTGCTACTGCCGCCATCAACGTCGTCACCGTCGGCTGCCACGCAACGTGTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
||
| CDS-3UTR TCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCTGCTGTGTCTGACCTaGCTTTCTGTGGGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLLCLT*LSVGLV Trigger: CACAAGCCCCACAGAAAGTCAGGTCAGACACAGCAG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCTGCTGTGTCTGACCTaGCTTTCTGTGGGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLLCLT*LSVGLV Trigger: CACAAGCCCCACAGAAAGTCAGGTCAGACACAGCAG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTTGGATGTGTCTGACCTaGCCTGGGTGGAGGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSWMCLT*PGWRGS Trigger: GGATCCCCTCCACCCAGGTCAGGTCAGACACATCCA...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTTGGCGCTGGGAAGATaGACATGGGTGGTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLALGR*TWVVPT Trigger: TGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTTGGCGCTGGGAAGATaGACATGGGTGGTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHLALGR*TWVVPT Trigger: TGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGCGGACGGCTCCGACTaGACGTTCCCCATTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRADGSD*TFPIFE Trigger: TTCAAAAATGGGGAACGTGCAGTCGGAGCCGTCCGC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGATGAACATGGGTGGTaGCAACAAGGCAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHDEHGW*QQGRCG Trigger: CCCACACCTGCCTTGTTGGCACCACCCATGTTCATC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGATGAACATGGGTGGTaGCAACAAGGCAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRDEHGW*QQGRCG Trigger: CCCACACCTGCCTTGTTGGCACCACCCATGTTCATC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGGCAGAGGAGGTATCTaGTGTGGACTTGGAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRGRGGI*CGLGGT Trigger: AGTGCCTCCAAGTCCACAGCAGATACCTCCTCTGCC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGGTGGCTCGCTCAGGTaGTTGGTAGGTGTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSGGSLR*LVGVLS Trigger: GCTGAGCACACCTACCAACCACCTGAGCGAGCCACC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCGGTGGCTCGCTCAGGTaGTTGGTAGGTGTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCRLGTLLARRVRPRGLGGGSLR*LVGVLS Trigger: GCTGAGCACACCTACCAACCACCTGAGCGAGCCACC...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGCGGTTGCTGGAACTTaGGATGTGACTGTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHAVAGT*DVTVAG Trigger: TCCAGCCACAGTCACATCCCAAGTTCCAGCAACCGC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCGAAGATGGATGTGTCTaGCCTGACCTGGGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCRLGTLLARRVRPRGLGEDGCV*PDLGGG Trigger: CCCTCCACCCAGGTCAGGTCAGACACATCCATCTTC...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTCGAAAGGCGGCCAGTaGCTTGCTGTTCCCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHSKGGQ*LAVPLL Trigger: TAACAAGGGAACAGCAAGGCACTGGCCGCCTTTCGA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCAGTAGCACTTGCAGGGACAGGAATTAAGCACCTCGAAAGGCGGCCAGTGCTCAGCGGTGGCGGTTaGTGGAACTTGGGATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAVALAGTGIKHLERRPVLSGGG*WNLGCD Trigger: GTCACATCCCAAGTTCCAGCAACCGCCACCGCTGAG...CACTGGCCGCCTTTCGAGGTGCTTAATTCCTGTCCCTGCAAGTGCTACTGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGATGTGGGGGACAAATaGGGCCCCGACTTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSDVGDK*GPDLKV Trigger: CACCTTCAAGTCGGGGCCCCATTTGTCCCCCACATC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCCTCAGCATAGGAGATaGCCCCAGAAGAGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRPQHRR*PQKRQT Trigger: TGTTTGCCTCTTCTGGGGCCATCTCCTATGCTGAGG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCCTCAGCATAGGAGATaGCCCCAGAAGAGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHPQHRR*PQKRQT Trigger: TGTTTGCCTCTTCTGGGGCCATCTCCTATGCTGAGG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCTTGAACCTGGGAAGGTaGTGTAAGGGGGCGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TCRLGTLLARRVRPRGLGLNLGR*CKGAAV Trigger: TACCGCCGCCCCCTTACACCACCTTCCCAGGTTCAA...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTAGGAGGTATCTGCTGTaGACTTGGAGGCACTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSRRYLL*TWRHWA Trigger: CGCCCAGTGCCTCCAAGTCCACAGCAGATACCTCCT...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCAGTTGGGGATAAAGTaGAGGGAGGGGTGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSQLGIK*REGWEP Trigger: TGGCTCCCACCCCTCCCTCCACTTTATCCCCAACTG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGGATGTGACTGTGGCTaGAGTTGCAGCTGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSGCDCG*SCSWDL Trigger: CAGGTCCCAGCTGCAACTCCAGCCACAGTCACATCC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCTGCTGTGTCTGACCTaGCTTTCTGTGGGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSLLCLT*LSVGLV Trigger: CACAAGCCCCACAGAAAGTCAGGTCAGACACAGCAG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGTCGAATTTGGGCTTTaGACCTGGGAAGGTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHVEFGL*TWEGGV Trigger: TACACCACCTTCCCAGGTTCAAAGCCCAAATTCGAC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR GCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGCGGACGGCTCCGACTaGACGTTCCCCATTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSADGSD*TFPIFE Trigger: TTCAAAAATGGGGAACGTGCAGTCGGAGCCGTCCGC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 |
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| CDS-3UTR GCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGGCAGAGGAGGTATCTaGTGTGGACTTGGAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSGRGGI*CGLGGT Trigger: AGTGCCTCCAAGTCCACAGCAGATACCTCCTCTGCC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTCACCCAGTCGAATTTaGGCTTTGAACCTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHSPSRI*ALNLGR Trigger: CCTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTCACCCAGTCGAATTTaGGCTTTGAACCTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRSPSRI*ALNLGR Trigger: CCTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACAGGCTCGCCATTGTTTaGCGCTGGGAAGATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHRLAIV*RWEDEH Trigger: ATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCT...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCAGGCTCGCCATTGTTTaGCGCTGGGAAGATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RLGTLLARRVRPRGLGSRRLAIV*RWEDEH Trigger: ATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCT...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGCGGTTGCTGGAACTTaGGATGTGACTGTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSAVAGT*DVTVAG Trigger: TCCAGCCACAGTCACATCCCAAGTTCCAGCAACCGC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGTCGAATTTGGGCTTTaGACCTGGGAAGGTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSVEFGL*TWEGGV Trigger: TACACCACCTTCCCAGGTTCAAAGCCCAAATTCGAC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCGTCGAATTTGGGCTTTaGACCTGGGAAGGTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TCRLGTLLARRVRPRGLGVEFGL*TWEGGV Trigger: TACACCACCTTCCCAGGTTCAAAGCCCAAATTCGAC...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTTCACCCAGTCGAATTTaGGCTTTGAACCTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSSPSRI*ALNLGR Trigger: CCTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGA...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTAGGCTCGCCATTGTTTaGCGCTGGGAAGATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CRLGTLLARRVRPRGLGSRLAIV*RWEDEH Trigger: ATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCT...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 90 bp | GGTCGGCGGACGGGCCACCAGTATCGGCGTCCTTGGGAGCGCTGGTaGCTGTGGTGTGGGTGGTGGCGCCGGTGGTGGCGTGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRTGHQYRRPWERW*LWCGWWRRWWRGWW Trigger: CCACCAGCCACGCCACCACCGGCGCCACCACCCACACCACAGCCACCAGCGCTCCCAAGGACGCCGATACTGGTGGCCCGTCCGCCGACC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS GCA 90 bp | TCCACTAGAGGCGTCCTGCGGGAGTCGGAGGCGCGGTCTGAGGCCTaGTCTTTTCGGGAACCCCCGCCCGCGGACGGCTCCGACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: STRGVLRESEARSEA*SFREPPPADGSDCT Trigger: CGTGCAGTCGGAGCCGTCCGCGGGCGGGGGTTCCCGAAAAGAGCAGGCCTCAGACCGCGCCTCCGACTCCCGCAGGACGCCTCTAGTGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 90 bp | CGGAACTGCCAGGGAACCAGACGCCCAGCCCTCGAGCCAGGCGCATaGCAGGGGATGAGGGGGTCACCTCGGGCTCCACTAGAGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNCQGTRRPALEPGA*QGMRGSPRAPLEAS Trigger: GGACGCCTCTAGTGGAGCCCGAGGTGACCCCCTCATCCCCTGCCATGCGCCTGGCTCGAGGGCTGGGCGTCTGGTTCCCTGGCAGTTCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | GGAGCCAGCCAGCTTGACAGTGGCCACCCACGGTGGCTCGCTCAGGTGGTTGGTGCAGCGGGCGGAGGCTaGGAGGGTCACCCTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GASQLDSGHPRWLAQVVGAAGGG*EGHPDH Trigger: GTGGTCAGGGTGACCCTCCAAGCCTCCGCCCGCTGC...ACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
||
| CDS CCA 90 bp | TTTTTCGGTCAGTTGCCGGGGCAGCGGTGGCAGCGGGCGGAGGCTTaGAGGGTCACCCTGACCACGATGGCTCGCCTCCAGAAGACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FFGQLPGQRWQRAEA*RVTLTTMARLQKTA Trigger: CGCGGTCTTCTGGAGGCGAGCCATCGTGGTCAGGGTGACCCTCCAAGCCTCCGCCCGCTGCCACCGCTGCCCCGGCAACTGACCGAAAAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS CCA 90 bp | GTGTGGGCCTCCGAGGCCCTGAAGATGGATGTGTCTGACCTGACCTaGGTGGAGGGGATCCCCAAGGCCCTGAGAGCGTGGTCGTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VWASEALKMDVSDLT*VEGIPKALRAWSCA Trigger: GGCGCACGACCACGCTCTCAGGGCCTTGGGGATCCCCTCCACCCAGGTCAGGTCAGACACATCCATCTTCAGGGCCTCGGAGGCCCACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGCAGCGGGCGGAGGCTaGGAGGGTCACCCTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRAAGGG*EGHPDH Trigger: GTGGTCAGGGTGACCCTCCAAGCCTCCGCCCGCTGC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS CCA 90 bp | CCAAGGGACGAGTGGCTCCAGGAGGGACCTCTCCCAAGGGACGAGTaGCTCCAGGAGGTTGGGGCCCTTGCTTCAGGACCTCAGCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRDEWLQEGPLPRDE*LQEVGALASGPQHR Trigger: CCTATGCTGAGGTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCTCCTGGAGCCACTCGTCCCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS CCA 90 bp | CAGGAGGGCTCACCCAGTCGAATTTGGGCTTTGAACCTGGGAAGGTaGTGTAAGGGGGCGGCGGTAGAGCCCGGGCAAGGGGAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QEGSPSRIWALNLGR*CKGAAVEPGQGEQA Trigger: TGCCTGCTCCCCTTGCCCGGGCTCTACCGCCGCCCCCTTACACCACCTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGAGCCCTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS CCA 90 bp | CGGGCCGCTCGGGGACCTTTGTTCCTGCGTGTACGAGTCTTGGGTTaGGGCATTGGCGGTGACAGCTCAGCGGTGGCGGTTGCTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: RAARGPLFLRVRVLG*GIGGDSSAVAVAGT Trigger: AGTTCCAGCAACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGACTCGTACACGCAGGAACAAAGGTCCCCGAGCGGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGCTGTGGAGGTTCCGTaGCTACCACCGCCACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHAVEVP*LPPPPP Trigger: AGGGGGTGGCGGTGGTAGCAACGGAACCTCCACAGC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGCTGTGGAGGTTCCGTaGCTACCACCGCCACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRAVEVP*LPPPPP Trigger: AGGGGGTGGCGGTGGTAGCAACGGAACCTCCACAGC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCAGGGAGCCAGCCAGCTaGACAGTGGCCACCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRREPAS*TVATHG Trigger: ACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCCCT...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGCAGCGGGCGGAGGCTaGGAGGGTCACCCTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: CRLGTLLARRVRPRGLGSAAGGG*EGHPDH Trigger: GTGGTCAGGGTGACCCTCCAAGCCTCCGCCCGCTGC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | CAGGTGGTTGGTAGGTGTGCTCAGCCAGGCAGACACGTTGCGTGGCAGCCGACGGTCTTTTTCGGTCAGTaGCCGGGGCAGCGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVVGRCAQPGRHVAWQPTVFFGQ*PGQRWQ Trigger: CTGCCACCGCTGCCCCGGCAACTGACCGAAAAAGAC...CGTCGGCTGCCACGCAACGTGTCTGCCTGGCTGAGCACACCTACCAACCACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCCAGTATCGGCGTCCTaGGGAGCGCTGGTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRPVSAS*GALVAV Trigger: CACAGCCACCAGCGCTCCCAAGGACGCCGATACTGG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 90 bp | CTGACCACGATGGCTCGCCTCCAGAAGACCGCGGATCCGAGGCACTaGAGTGCCCGTGGGTTTTCGCCACTTAGATGGCGCAGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTTMARLQKTADPRH*SARGFSPLRWRRQQ Trigger: CTGCTGCCTGCGCCATCTAAGTGGCGAAAACCCACGGGCACTTCAGTGCCTCGGATCCGCGGTCTTCTGGAGGCGAGCCATCGTGGTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 90 bp | GGACCAGAACACCCTTCGCCATCTCCGTCACCACCCTCGGTTTCCTaGGCTGCACGAGGGACCTCTCCCAAGGGACGAGTGGCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPEHPSPSPSPPSVS*AARGTSPKGRVAPG Trigger: TCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCTCGTGCAGCTCAGGAAACCGAGGGTGGTGACGGAGATGGCGAAGGGTGTTCTGGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 90 bp | GAGGCACTGGGCGAACAGGCTCGCCATTGTTTGGCGCTGGGAAGATaGACATGGGTGGTGCCAACAAGGCAGGTGTGGGCCTCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EALGEQARHCLALGR*TWVVPTRQVWASEA Trigger: GGCCTCGGAGGCCCACACCTGCCTTGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 90 bp | TTGGCGGTGACAGCTCAGCGGTGGCGGTTGCTGGAACTTGGGATGTaGCTGTGGCTGGAGTTGCAGCTGGGACCTGGTCGGCAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LAVTAQRWRLLELGM*LWLELQLGPGRQLQ Trigger: CTGCAGCTGCCGACCAGGTCCCAGCTGCAACTCCAGCCACAGTCACATCCCAAGTTCCAGCAACCGCCACCGCTGAGCTGTCACCGCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS GCA 90 bp | AGAACACCCTTCGCCATCTCCGTCACCACCCTCGGTTTCCTGAGCTaGACGAGGGACCTCTCCCAAGGGACGAGTGGCTCCAGGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RTPFAISVTTLGFLS*TRDLSQGTSGSRRD Trigger: GTCCCTCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCTCGTGCAGCTCAGGAAACCGAGGGTGGTGACGGAGATGGCGAAGGGTGTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 90 bp | GAGTTGCAGCTGGGACCTGGTCGGCAGCTGCAGTTGGGGATAAAGTaGAGGGAGGGGTGGGAGCCAAGGCTGACTCTAAGTGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ELQLGPGRQLQLGIK*REGWEPRLTLSGQG Trigger: GCCCTGGCCACTTAGAGTCAGCCTTGGCTCCCACCCCTCCCTCCACTTTATCCCCAACTGCAGCTGCCGACCAGGTCCCAGCTGCAACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCGGCTCGCTCAGGTGGTaGGTAGGTGTGCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRGSLRW*VGVLSQ Trigger: CTGGCTGAGCACACCTACCAACCACCTGAGCGAGCC...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGGCTCGCTCAGGTGGTaGGTAGGTGTGCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHGSLRW*VGVLSQ Trigger: CTGGCTGAGCACACCTACCAACCACCTGAGCGAGCC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGTCTTTTTCGGTCAGTaGCCGGGGCAGCGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHVFFGQ*PGQRWQ Trigger: CTGCCACCGCTGCCCCGGCAACTGACCGAAAAAGAC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCAGTGGCTCCAGGAGGTaGGGGCCCTTGCTTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRSGSRR*GPLLQD Trigger: GTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACT...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACAGTGGCTCCAGGAGGTaGGGGCCCTTGCTTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHSGSRR*GPLLQD Trigger: GTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACT...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTCTTGGGTTGGGGCATaGGCGGTGACAGCTCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHSWVGA*AVTAQR Trigger: CCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGA...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | CAGTCGCACTCAGGTAGAATGGGTGGCCTGCAAGTCGTAGTGCTCCAGGCCCGCTCTTGGGTTGGGGCATaGGCGGTGACAGCTCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSHSGRMGGLQVVVLQARSWVGA*AVTAQR Trigger: CCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGA...GCGGGCCTGGAGCACTACGACTTGCAGGCCACCCATTCTACCTGAGTGCGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCTCTTGGGTTGGGGCATaGGCGGTGACAGCTCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRSWVGA*AVTAQR Trigger: CCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGA...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 90 bp | TTGGCGGTGACAGCTCAGCGGTGGCGGTTGCTGGAACTTGGGATGTaGCTGTGGCTGGAGTTGCAGCTGGGACCTGGTCGGCAGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LAVTAQRWRLLELGM*LWLELQLGPGRQLT Trigger: AGTCAGCTGCCGACCAGGTCCCAGCTGCAACTCCAGCCACAGTCACATCCCAAGTTCCAGCAACCGCCACCGCTGAGCTGTCACCGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS GCA 90 bp | GGGCTTGTGGCCGACGAGGCCAGAGTGATTCTGCGGCTCAGGGGCTaGGGATCGCAAGTTGATGGTGCTGGCGGTAGTTGTTTCCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLVADEARVILRLRG*GSQVDGAGGSCFRG Trigger: ACCTCGGAAACAACTACCGCCAGCACCATCAACTTGCGATCCGCAGCCCCTGAGCCGCAGAATCACTCTGGCCTCGTCGGCCACAAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTAGGGAGCCAGCCAGCTaGACAGTGGCCACCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: CRLGTLLARRVRPRGLGSREPAS*TVATHG Trigger: ACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCCCT...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGGGAGCCAGCCAGCTaGACAGTGGCCACCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCRLGTLLARRVRPRGLGREPAS*TVATHG Trigger: ACCGTGGGTGGCCACTGTCAAGCTGGCTGGCTCCCT...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCGGCTCAGGCTGTTCTaGGACTGCCCCTGTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHRLRLF*DCPCLH Trigger: ATGCAGACAGGGGCAGTCCAAGAACAGCCTGAGCCG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCCAGTATCGGCGTCCTaGGGAGCGCTGGTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CRLGTLLARRVRPRGLGSPVSAS*GALVAV Trigger: CACAGCCACCAGCGCTCCCAAGGACGCCGATACTGG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACGGCGGTTGCTGGAACTaGGGATGTGACTGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHGGCWN*GCDCGW Trigger: CCAGCCACAGTCACATCCCAAGTTCCAGCAACCGCC...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACTGGCGGTTGCTGGAACTaGGGATGTGACTGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLLARRVRPRGLGSRTGGCWN*GCDCGW Trigger: CCAGCCACAGTCACATCCCAAGTTCCAGCAACCGCC...AGTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGGCTCGCTCAGGTGGTaGGTAGGTGTGCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRLGTLLARRVRPRGLGSGSLRW*VGVLSQ Trigger: CTGGCTGAGCACACCTACCAACCACCTGAGCGAGCC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCGACGGTGACGACGTTGATGGCGGCAGTAGCACTTGCAGGGACAGGAATCGGCTCAGGCTGTTCTaGGACTGCCCCTGTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AADGDDVDGGSSTCRDRNRLRLF*DCPCLH Trigger: ATGCAGACAGGGGCAGTCCAAGAACAGCCTGAGCCG...ATTCCTGTCCCTGCAAGTGCTACTGCCGCCATCAACGTCGTCACCGTCGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGTCTTTTTCGGTCAGTaGCCGGGGCAGCGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRLGTLLARRVRPRGLGSVFFGQ*PGQRWQ Trigger: CTGCCACCGCTGCCCCGGCAACTGACCGAAAAAGAC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACAGGAGGTTGGGGCCCTaGCTTCAGGACCTCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHRRLGP*LQDLSI Trigger: TATGCTGAGGTCCTGAAGCAAGGGCCCCAACCTCCT...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCACCGAACAGGCTCGCCATaGTTTGGCGCTGGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGYFIGEEGEAEGVGQSHRTGSP*FGAGKM Trigger: CATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCG...GTGCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCGAACAGGCTCGCCATaGTTTGGCGCTGGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRRTGSP*FGAGKM Trigger: CATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 90 bp | TGGACTTGGAGGCACTGGGCGAACAGGCTCGCCATTGTTTGGCGCTaGGAAGATGAACATGGGTGGTGCCAACAAGGCAGGTGTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WTWRHWANRLAIVWR*EDEHGWCQQGRCGP Trigger: AGGCCCACACCTGCCTTGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTGGCGGTTGCTGGAACTaGGGATGTGACTGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRLGTLLARRVRPRGLGSGGCWN*GCDCGW Trigger: CCAGCCACAGTCACATCCCAAGTTCCAGCAACCGCC...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 90 bp | GGAAATGCCGTTCAGTGCCATCAGGAGGGCTCACCCAGTCGAATTTaGGCTTTGAACCTGGGAAGGTGGTGTAAGGGGGCGGCGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNAVQCHQEGSPSRI*ALNLGRWCKGAAVE Trigger: CTCTACCGCCGCCCCCTTACACCACCTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGAGCCCTCCTGATGGCACTGAACGGCATTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 90 bp | CTGCTGTGGACTTGGAGGCACTGGGCGAACAGGCTCGCCATTGTTTaGCGCTGGGAAGATGAACATGGGTGGTGCCAACAAGGCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLWTWRHWANRLAIV*RWEDEHGWCQQGRC Trigger: ACACCTGCCTTGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCACAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 90 bp | TGGTGGTGGCGGCAGAGGAGGTATCTGCTGTGGACTTGGAGGCACTaGGCGAACAGGCTCGCCATTGTTTGGCGCTGGGAAGATGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: WWWRQRRYLLWTWRH*ANRLAIVWRWEDEH Trigger: ATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCACAGCAGATACCTCCTCTGCCGCCACCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGGAGGTTGGGGCCCTaGCTTCAGGACCTCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: TCRLGTLLARRVRPRGLGRRLGP*LQDLSI Trigger: TATGCTGAGGTCCTGAAGCAAGGGCCCCAACCTCCT...GCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209019.2 |
||
| CDS-3UTR CAA 90 bp | AGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCGCCTCACCCAGTCGAATTaGGGCTTTGAACCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGTLLARRVRPRGLGSRLTQSN*GFEPGK Trigger: CTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGAG...GCGACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 90 bp | ACCTTTGTTCCTGCGTGTACGAGTCTTGGGTTGGGGCATTGGCGGTaGCAGCTCAGCGGTGGCGGTTGCTGGAACTTGGGATGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TFVPACTSLGLGHWR*QLSGGGCWNLGCDC Trigger: ACAGTCACATCCCAAGTTCCAGCAACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGACTCGTACACGCAGGAACAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGGGTACTTTATTGGCGAGGAGGGTGAGGCCGAGGGGGTTGGGCAGTCTCACCCAGTCGAATTaGGGCTTTGAACCTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: CRLGTLLARRVRPRGLGSLTQSN*GFEPGK Trigger: CTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGAG...ACTGCCCAACCCCCTCGGCCTCACCCTCCTCGCCAATAAAGTACCCAGTCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS GCA 72 bp | GGCGTCCTGCGGGAGTCGGAGGCGCGGTCTGAGGCCTaGTCTTTTCGGGAACCCCCGCCCGCGGACGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GVLRESEARSEA*SFREPPPADGS Trigger: GGAGCCGTCCGCGGGCGGGGGTTCCCGAAAAGAGCAGGCCTCAGACCGCGCCTCCGACTCCCGCAGGACGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | TGGTGTGGGTGGTGGCGCCGGTGGTGGCGTGGCTGGTaGCGTGGGTGGTGGTGGCGGCAGAGGAGGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: WCGWWRRWWRGW*RGWWWRQRRYL Trigger: CAGATACCTCCTCTGCCGCCACCACCACCCACGCCACCAGCCACGCCACCACCGGCGCCACCACCCACACCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 72 bp | GGGCTCCCCCGGCCGCCTGACCCTCGCTGCTGTGTCTaGCCTGACTTTCTGTGGGGCTTGTGGCCGACGAGG | + |
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Preference number: 6 (lower is better) Translates to: GLPRPPDPRCCV*PDFLWGLWPTR Trigger: CCTCGTCGGCCACAAGCCCCACAGAAAGTCAGGTCAGACACAGCAGCGAGGGTCAGGCGGCCGGGGGAGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | GAAGTAGCAGACCGAGCCATTTCGCCCTCTCCAGCTTaGGGAGGTACCCCTCCGTGGGCTCCCCCGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: EVADRAISPSPA*GGTPPWAPPAA Trigger: GGCGGCCGGGGGAGCCCACGGAGGGGTACCTCCCCAAGCTGGAGAGGGCGAAATGGCTCGGTCTGCTACTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CGCCGGTGGTGGCGTGGCTGGTGGCGTGGGTGGTGGTaGCGGCAGAGGAGGTATCTGCTGTGGACTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RRWWRGWWRGWW*RQRRYLLWTWR Trigger: CCTCCAAGTCCACAGCAGATACCTCCTCTGCCGCCACCACCACCCACGCCACCAGCCACGCCACCACCGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 72 bp | GCAAACAGTCCGCCACCACCGGCCCCGGGTGAGGCTTaGGCTGCTAAGGGACCCGAGGCCGATGTGGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ANSPPPPAPGEA*AAKGPEADVGD Trigger: GTCCCCCACATCGGCCTCGGGTCCCTTAGCAGCCAAAGCCTCACCCGGGGCCGGTGGTGGCGGACTGTTTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 90 bp | CTTTTTCGGTCAGTTGCCGGGGCAGCGGTGGCAGCGGGCGGAGGCTaGGAGGGTCACCCTGACCACGATGGCTCGCCTCCAGAAGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: LFRSVAGAAVAAGGG*EGHPDHDGSPPEDR Trigger: GCGGTCTTCTGGAGGCGAGCCATCGTGGTCAGGGTGACCCTCCAAGCCTCCGCCCGCTGCCACCGCTGCCCCGGCAACTGACCGAAAAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS GCA 72 bp | ATGAGGGGGTCACCTCGGGCTCCACTAGAGGCGTCCTaGGGGAGTCGGAGGCGCGGTCTGAGGCCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: MRGSPRAPLEAS*GSRRRGLRPAL Trigger: AAGAGCAGGCCTCAGACCGCGCCTCCGACTCCCGCAGGACGCCTCTAGTGGAGCCCGAGGTGACCCCCTCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CAAACAGTCCGCCACCACCGGCCCCGGGTGAGGCTTTaGCTGCTAAGGGACCCGAGGCCGATGTGGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: QTVRHHRPRVRL*LLRDPRPMWGT Trigger: TGTCCCCCACATCGGCCTCGGGTCCCTTAGCAGCCAAAGCCTCACCCGGGGCCGGTGGTGGCGGACTGTTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CCTGAGCTGCACGAGGGACCTCTCCCAAGGGACGAGTaGCTCCAGGAGGGACCTCTCCCAAGGGACGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PELHEGPLPRDE*LQEGPLPRDEW Trigger: CCACTCGTCCCTTGGGAGAGGTCCCTCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCTCGTGCAGCTCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | GAGTGGCTCCAGGAGGGACCTCTCCCAAGGGACGAGTaGCTCCAGGAGGTTGGGGCCCTTGCTTCAGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: EWLQEGPLPRDE*LQEVGALASGP Trigger: AGGTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCTCCTGGAGCCACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 90 bp | GGCTCCAGGAGGGACCTCTCCCAAGGGACGAGTGGCTCCAGGAGGTaGGGGCCCTTGCTTCAGGACCTCAGCATAGGAGATGGCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSRRDLSQGTSGSRR*GPLLQDLSIGDGPR Trigger: TCTGGGGCCATCTCCTATGCTGAGGTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCTCCTGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 72 bp | CACCCTTCGCCATCTCCGTCACCACCCTCGGTTTCCTaGGCTGCACGAGGGACCTCTCCCAAGGGACGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HPSPSPSPPSVS*AARGTSPKGRV Trigger: CACTCGTCCCTTGGGAGAGGTCCCTCGTGCAGCTCAGGAAACCGAGGGTGGTGACGGAGATGGCGAAGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 72 bp | TGTGGCTGGAGTTGCAGCTGGGACCTGGTCGGCAGCTaGCTTTCTGTGGGGCTTGTGGCCGACGAGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CGWSCSWDLVGS*LSVGLVADEAR Trigger: TCTGGCCTCGTCGGCCACAAGCCCCACAGAAAGTCAGCTGCCGACCAGGTCCCAGCTGCAACTCCAGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208288.2 |
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| CDS GCA 72 bp | TTCGCCATCTCCGTCACCACCCTCGGTTTCCTGAGCTaGACGAGGGACCTCTCCCAAGGGACGAGTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FAISVTTLGFLS*TRDLSQGTSGS Trigger: GGAGCCACTCGTCCCTTGGGAGAGGTCCCTCGTGCAGCTCAGGAAACCGAGGGTGGTGACGGAGATGGCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CGTGGGTGGTGGTGGCGGCAGAGGAGGTATCTGCTGTaGACTTGGAGGCACTGGGCGAACAGGCTCGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RGWWWRQRRYLL*TWRHWANRLAI Trigger: AATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCACAGCAGATACCTCCTCTGCCGCCACCACCACCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CGGCAGCTGCAGTTGGGGATAAAGTGGAGGGAGGGGTaGGAGCCAAGGCTGACTCTAAGTGGCCAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQLQLGIKWREG*EPRLTLSGQGL Trigger: CAGGCCCTGGCCACTTAGAGTCAGCCTTGGCTCCCACCCCTCCCTCCACTTTATCCCCAACTGCAGCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CCGCTCGGGGACCTTTGTTCCTGCGTGTACGAGTCTTaGGTTGGGGCATTGGCGGTGACAGCTCAGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLGDLCSCVYES*VGALAVTAQRW Trigger: CCACCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGACTCGTACACGCAGGAACAAAGGTCCCCGAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 90 bp | GCCGTTCAGTGCCATCAGGAGGGCTCACCCAGTCGAATTTGGGCTTaGAACCTGGGAAGGTGGTGTAAGGGGGCGGCGGTAGAGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVQCHQEGSPSRIWA*NLGRWCKGAAVEPG Trigger: CCCGGGCTCTACCGCCGCCCCCTTACACCACCTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGAGCCCTCCTGATGGCACTGAACGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 72 bp | ATGGCTCGCCTCCAGAAGACCGCGGATCCGAGGCACTaGAGTGCCCGTGGGTTTTCGCCACTTAGATGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: MARLQKTADPRH*SARGFSPLRWR Trigger: GCGCCATCTAAGTGGCGAAAACCCACGGGCACTTCAGTGCCTCGGATCCGCGGTCTTCTGGAGGCGAGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 72 bp | ACAGCTCAGCGGTGGCGGTTGCTGGAACTTGGGATGTaGCTGTGGCTGGAGTTGCAGCTGGGACCTGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: TAQRWRLLELGM*LWLELQLGPGR Trigger: CCGACCAGGTCCCAGCTGCAACTCCAGCCACAGTCACATCCCAAGTTCCAGCAACCGCCACCGCTGAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 72 bp | CCTGCGTGTACGAGTCTTGGGTTGGGGCATTGGCGGTaGCAGCTCAGCGGTGGCGGTTGCTGGAACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PACTSLGLGHWR*QLSGGGCWNLG Trigger: TCCCAAGTTCCAGCAACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGACTCGTACACGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS GCA 72 bp | GCCGACGAGGCCAGAGTGATTCTGCGGCTCAGGGGCTaGGGATCGCAAGTTGATGGTGCTGGCGGTAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ADEARVILRLRG*GSQVDGAGGSC Trigger: ACAACTACCGCCAGCACCATCAACTTGCGATCCGCAGCCCCTGAGCCGCAGAATCACTCTGGCCTCGTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | TCACCCAGTCGAATTTGGGCTTTGAACCTGGGAAGGTaGTGTAAGGGGGCGGCGGTAGAGCCCGGGCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPSRIWALNLGR*CKGAAVEPGQG Trigger: CCCTTGCCCGGGCTCTACCGCCGCCCCCTTACACCACCTTCCCAGGTTCAAAGCCCAAATTCGACTGGGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CGGGGACCTTTGTTCCTGCGTGTACGAGTCTTGGGTTaGGGCATTGGCGGTGACAGCTCAGCGGTGGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: RGPLFLRVRVLG*GIGGDSSAVAV Trigger: AACCGCCACCGCTGAGCTGTCACCGCCAATGCCCCAACCCAAGACTCGTACACGCAGGAACAAAGGTCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098609.4 ENSMUST00000208288.2 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 72 bp | TCCCAAGGGACGAGTGGCTCCAGGAGGTTGGGGCCCTaGCTTCAGGACCTCAGCATAGGAGATGGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SQGTSGSRRLGP*LQDLSIGDGPR Trigger: TCTGGGGCCATCTCCTATGCTGAGGTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 90 bp | AGGGACCTCTCCCAAGGGACGAGTGGCTCCAGGAGGTTGGGGCCCTaGCTTCAGGACCTCAGCATAGGAGATGGCCCCAGAAGAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RDLSQGTSGSRRLGP*LQDLSIGDGPRRGK Trigger: TTTGCCTCTTCTGGGGCCATCTCCTATGCTGAGGTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS TCA 72 bp | GGCGAACAGGCTCGCCATTGTTTGGCGCTGGGAAGATaGACATGGGTGGTGCCAACAAGGCAGGTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GEQARHCLALGR*TWVVPTRQVWA Trigger: GGCCCACACCTGCCTTGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CGGCAGAGGAGGTATCTGCTGTGGACTTGGAGGCACTaGGCGAACAGGCTCGCCATTGTTTGGCGCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RQRRYLLWTWRH*ANRLAIVWRWE Trigger: TTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCACAGCAGATACCTCCTCTGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | TGGTGGTGGCGGCAGAGGAGGTATCTGCTGTGGACTTaGAGGCACTGGGCGAACAGGCTCGCCATTGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WWWRQRRYLLWT*RHWANRLAIVW Trigger: CCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCACAGCAGATACCTCCTCTGCCGCCACCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | CTGGGACCTGGTCGGCAGCTGCAGTTGGGGATAAAGTaGAGGGAGGGGTGGGAGCCAAGGCTGACTCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGPGRQLQLGIK*REGWEPRLTLS Trigger: ACTTAGAGTCAGCCTTGGCTCCCACCCCTCCCTCCACTTTATCCCCAACTGCAGCTGCCGACCAGGTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 72 bp | AGGGACCTCTCCCAAGGGACGAGTGGCTCCAGGAGGTaGGGGCCCTTGCTTCAGGACCTCAGCATAGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RDLSQGTSGSRR*GPLLQDLSIGD Trigger: ATCTCCTATGCTGAGGTCCTGAAGCAAGGGCCCCAACCTCCTGGAGCCACTCGTCCCTTGGGAGAGGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CCA 72 bp | AGGCACTGGGCGAACAGGCTCGCCATTGTTTGGCGCTaGGAAGATGAACATGGGTGGTGCCAACAAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RHWANRLAIVWR*EDEHGWCQQGR Trigger: CCTGCCTTGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 72 bp | TGTGGACTTGGAGGCACTGGGCGAACAGGCTCGCCATaGTTTGGCGCTGGGAAGATGAACATGGGTGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CGLGGTGRTGSP*FGAGKMNMGGA Trigger: GGCACCACCCATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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| CDS CAA 90 bp | GGTATCTGCTGTGGACTTGGAGGCACTGGGCGAACAGGCTCGCCATaGTTTGGCGCTGGGAAGATGAACATGGGTGGTGCCAACAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GICCGLGGTGRTGSP*FGAGKMNMGGANKA Trigger: TGCCTTGTTGGCACCACCCATGTTCATCTTCCCAGCGCCAAACAATGGCGAGCCTGTTCGCCCAGTGCCTCCAAGTCCACAGCAGATACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098609.4 ENSMUST00000208330.2 ENSMUST00000209019.2 |
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