Pregenerated sensors for GGCX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053460Ensembl transcript IDs: ENSMUST00000065906.9, ENSMUST00000132995.2, ENSMUST00000205738.2, ENSMUST00000207000.2, ENSMUST00000207012.2
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGAAGCACTAGGCCGAGGAGCGGCTTTGGTGGGCAGCAGCTCTTaGAGCCTTTTCGGGCATCGGGCTACCAACTTCCGAGGCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: QEALGRGAALVGSSS*SLFGHRATNFRGHS Trigger: TGAATGGCCTCGGAAGTTGGTAGCCCGATGCCCGAAAAGGCTGCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGCCTAGTGCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR CCA 90 bp | TCGGGCATTCAGCAAGCCATCCACAGACCTAGGCCAGAGACGCAGTaGGTTCCTTTCACCTGGGACAGCACTGCTGAGCCACCCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SGIQQAIHRPRPETQ*VPFTWDSTAEPPWW Trigger: CCACCAGGGTGGCTCAGCAGTGCTGTCCCAGGTGAAAGGAACCCACTGCGTCTCTGGCCTAGGTCTGTGGATGGCTTGCTGAATGCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR CCA 90 bp | CAGGGAGATAAATCCATCAAGAGTGGCTGCACCCAAGGTGTGCGCTaGAAGGGGGACCAGACAGCCTGCACGATGTCCACACGAGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: QGDKSIKSGCTQGVR*KGDQTACTMSTRGS Trigger: TGACCCTCGTGTGGACATCGTGCAGGCTGTCTGGTCCCCCTTCCAGCGCACACCTTGGGTGCAGCCACTCTTGATGGATTTATCTCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR GCA 90 bp | TCCTGTAACTTGGTCCTCCAGGGAGATAAATCCATCAAGAGTGGCTaGACCCAAGGTGTGCGCTGGAAGGGGGACCAGACAGCCTGCACG | + |
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Preference number: 1 (lower is better) Translates to: SCNLVLQGDKSIKSG*TQGVRWKGDQTACT Trigger: CGTGCAGGCTGTCTGGTCCCCCTTCCAGCGCACACCTTGGGTGCAGCCACTCTTGATGGATTTATCTCCCTGGAGGACCAAGTTACAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
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| 3UTR CCA 90 bp | CAGTGGGTTCCTTTCACCTGGGACAGCACTGCTGAGCCACCCTGGTaGCCCCTGTCCTTTGGTTTCTGCTATCACTTCCACCTCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: QWVPFTWDSTAEPPW*PLSFGFCYHFHLTA Trigger: TGCTGTGAGGTGGAAGTGATAGCAGAAACCAAAGGACAGGGGCCACCAGGGTGGCTCAGCAGTGCTGTCCCAGGTGAAAGGAACCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR CCA 90 bp | ACGCAGTGGGTTCCTTTCACCTGGGACAGCACTGCTGAGCCACCCTaGTGGCCCCTGTCCTTTGGTTTCTGCTATCACTTCCACCTCACA | + |
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Preference number: 1 (lower is better) Translates to: TQWVPFTWDSTAEPP*WPLSFGFCYHFHLT Trigger: TGTGAGGTGGAAGTGATAGCAGAAACCAAAGGACAGGGGCCACCAGGGTGGCTCAGCAGTGCTGTCCCAGGTGAAAGGAACCCACTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR GCA 90 bp | GGGAAGCAGGAGGCTCAGGCAAGTGGCATATTGCTTCAGCATGTCTaGATGATCCTTCCATCGCCGGCTCTGTGTGAATACCCCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: GKQEAQASGILLQHV*MILPSPALCEYPRV Trigger: AACCCTGGGGTATTCACACAGAGCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR CCA 90 bp | CCACACGAGGGTCAAAAAGCTTGGGAAGCAGGAGGCTCAGGCAAGTaGCATATTGCTTCAGCATGTCTGCATGATCCTTCCATCGCCGGC | + |
|
Preference number: 1 (lower is better) Translates to: PHEGQKAWEAGGSGK*HIASACLHDPSIAG Trigger: GCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCTTCCCAAGCTTTTTGACCCTCGTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR TCA 90 bp | AGCAGGAGGCTCAGGCAAGTGGCATATTGCTTCAGCATGTCTGCATaGTCCTTCCATCGCCGGCTCTGTGTGAATACCCCAGGGTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: SRRLRQVAYCFSMSA*SFHRRLCVNTPGLR Trigger: CCTTAACCCTGGGGTATTCACACAGAGCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR CCA 90 bp | AGTTCATGCAGTGAAAGTAGGACACGAAGAACAGGCCGACGGGTCTaGAGGCATCAAAGAAGAGCAGGAAGCCAGCCGAGAGGTCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SSCSESRTRRTGRRV*RHQRRAGSQPRGQG Trigger: TCCTTGACCTCTCGGCTGGCTTCCTGCTCTTCTTTGATGCCTCCAGACCCGTCGGCCTGTTCTTCGTGTCCTACTTTCACTGCATGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR CCA 90 bp | TTCTGTTCTGCCACCAATTCCACGGTGACTTCTCCCTGCAGCAGCTaGATGCTAGTGTTGCCCAGGTCTTCACTCACAAAATTCTCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: FCSATNSTVTSPCSS*MLVLPRSSLTKFSK Trigger: CTTGGAGAATTTTGTGAGTGAAGACCTGGGCAACACTAGCATCCAGCTGCTGCAGGGAGAAGTCACCGTGGAATTGGTGGCAGAACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
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| 3UTR CCA 90 bp | TCATCAACTGGTTCAAATGGTCGCAAGTTTGCATATGTCACCTCTTaGGCTAGTTGCTCTAGGGAAGGGCGGCCTAATAGCAGGTTTCGG | + |
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Preference number: 1 (lower is better) Translates to: SSTGSNGRKFAYVTS*ASCSREGRPNSRFR Trigger: CCGAAACCTGCTATTAGGCCGCCCTTCCCTAGAGCAACTAGCCCAAGAGGTGACATATGCAAACTTGCGACCATTTGAACCAGTTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
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| 3UTR GCA 90 bp | GGTTCAAATGGTCGCAAGTTTGCATATGTCACCTCTTGGGCTAGTTaGTCTAGGGAAGGGCGGCCTAATAGCAGGTTTCGGAGTGAAATT | + |
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Preference number: 1 (lower is better) Translates to: GSNGRKFAYVTSWAS*SREGRPNSRFRSEI Trigger: AATTTCACTCCGAAACCTGCTATTAGGCCGCCCTTCCCTAGAGCAACTAGCCCAAGAGGTGACATATGCAAACTTGCGACCATTTGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
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| 3UTR TCA 90 bp | GCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTaGAAGCCTGTCCCATATCATTTTTCTCCAAAAATATGTTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: AEGPTMSLRPAWAVL*KPVPYHFSPKICSL Trigger: CAAAGAACATATTTTTGGAGAAAAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
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| 3UTR TCA 90 bp | TCTGGGCTCACACACAGAAAGCAAAGTCTGCACCCCTGCAGTATCTaGAAACAGCTATGTCTGGCTTTAGTCTTCTCTTCTTCTAAGATG | + |
|
Preference number: 1 (lower is better) Translates to: SGLTHRKQSLHPCSI*KQLCLALVFSSSKM Trigger: CATCTTAGAAGAAGAGAAGACTAAAGCCAGACATAGCTGTTTTCAGATACTGCAGGGGTGCAGACTTTGCTTTCTGTGTGTGAGCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR GCA 90 bp | CTCCAAAAATATGTTCTTTGCGTAGACAATAAGCCTATAACAGGCTaGCCCCACATCTGCACAGAGCATCTGTACATCCCTCAGAACTCA | + |
|
Preference number: 1 (lower is better) Translates to: LQKYVLCVDNKPITG*PHICTEHLYIPQNS Trigger: TGAGTTCTGAGGGATGTACAGATGCTCTGTGCAGATGTGGGGGCAGCCTGTTATAGGCTTATTGTCTACGCAAAGAACATATTTTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
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| 3UTR TCA 90 bp | CTCTGTAGTGTTGACATAGACGTACATGTAGCAGGAAGGACTAGATaGTACAGTATAGACTTTATGGTACTCTCCAGCAGGCAACTGCAT | + |
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Preference number: 1 (lower is better) Translates to: LCSVDIDVHVAGRTR*YSIDFMVLSSRQLH Trigger: ATGCAGTTGCCTGCTGGAGAGTACCATAAAGTCTATACTGTATCATCTAGTCCTTCCTGCTACATGTACGTCTATGTCAACACTACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
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| 3UTR CCA 90 bp | CAGGTAGTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTaGTCTGGTCTACATGGAGAAATCTTGTCTATAAAAACTAAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: QVVMSRAFNFSTQES*SGLHGEILSIKTKS Trigger: GCTTTTAGTTTTTATAGACAAGATTTCTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCACTACCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| 3UTR TCA 90 bp | TTACAGGAGAGGATATACCAAGGTACCAGTAGTGGTTTGCATCCATaGATGTCAACTGAAAGGCCAACAAACCATACAGATAGGAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: LQERIYQGTSSGLHP*MSTERPTNHTDRSD Trigger: ATCACTCCTATCTGTATGGTTTGTTGGCCTTTCAGTTGACATTCATGGATGCAAACCACTACTGGTACCTTGGTATATCCTCTCCTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR CAA 90 bp | AAGATGGCTCCCAGCTGGTGGCGCAGCCCGGGCTTCGGGCCAGCTTaGCCCCGGGACCTCTTATACACACAGGAAGCACTAGGCCGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KMAPSWWRSPGFGPA*PRDLLYTQEALGRG Trigger: TCCTCGGCCTAGTGCTTCCTGTGTGTATAAGAGGTCCCGGGGCAAAGCTGGCCCGAAGCCCGGGCTGCGCCACCAGCTGGGAGCCATCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR CAA 90 bp | ACAGGAAGCACTAGGCCGAGGAGCGGCTTTGGTGGGCAGCAGCTCTaGCAGCCTTTTCGGGCATCGGGCTACCAACTTCCGAGGCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: TGSTRPRSGFGGQQL*QPFRASGYQLPRPF Trigger: GAATGGCCTCGGAAGTTGGTAGCCCGATGCCCGAAAAGGCTGCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGCCTAGTGCTTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR CAA 90 bp | CGGGACCTCTTATACACACAGGAAGCACTAGGCCGAGGAGCGGCTTaGGTGGGCAGCAGCTCTTGCAGCCTTTTCGGGCATCGGGCTACC | + |
|
Preference number: 2 (lower is better) Translates to: RDLLYTQEALGRGAA*VGSSSCSLFGHRAT Trigger: GGTAGCCCGATGCCCGAAAAGGCTGCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGCCTAGTGCTTCCTGTGTGTATAAGAGGTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAGCAGGAGGCTCAGGCAAGTGGCATATTGCTTCAGCATGTCTGCATGATATGGCTCCCAGCTGGTaGCGCAGCCCGGGCTTCGGG | + |
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Preference number: 2 (lower is better) Translates to: WEAGGSGKWHIASACLHDMAPSW*RSPGFG Trigger: CCCGAAGCCCGGGCTGCGCCACCAGCTGGGAGCCAT...ATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGAGTAGCCCCCAACCCAGTCAGCATCGAGCTTCTTCACACCCGCGATGAACCTTCCAAAAGAGGCTaGAGTTCTGGAGGCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: HGVAPNPVSIELLHTRDEPSKRG*SSGGRG Trigger: GCCCCTGCCTCCAGAACTTCAGCCTCTTTTGGAAGG...TTCATCGCGGGTGTGAAGAAGCTCGATGCTGACTGGGTTGGGGGCTACTCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTCTGCATGATCCTTCCATCGCCGGCTCTGTGTGAATACCCCAGGGTTAAGGCCGAGGAGCGGCTTTaGTGGGCAGCAGCTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: HVCMILPSPALCEYPRVKAEERL*WAAALA Trigger: TGCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGC...CTTAACCCTGGGGTATTCACACAGAGCCGGCGATGGAAGGATCATGCAGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGCATTCAGCAAGCCATCCACAGCAGCATCATGCCCAGTaGCCCTGGGGATTGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SKGAREHSSFGHSASHPQQHHAQ*PWGLVR Trigger: CCTCACCAATCCCCAGGGGCACTGGGCATGATGCTG...CTGTGGATGGCTTGCTGAATGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132995.2 ENSMUST00000207012.2 |
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| 3UTR-3UTR CCA 90 bp | GTACACGATGAAGATCTGGCCACGCAGAACTGTGTAGTTCCAAAGGGGCACGTGGCTGAGCCACCCTGGTaGCCCCTGTCCTTTGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: VHDEDLATQNCVVPKGHVAEPPW*PLSFGF Trigger: GAAACCAAAGGACAGGGGCCACCAGGGTGGCTCAGC...CACGTGCCCCTTTGGAACTACACAGTTCTGCGTGGCCAGATCTTCATCGTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR-3UTR CCA 90 bp | GTACACGATGAAGATCTGGCCACGCAGAACTGTGTAGTTCCAAAGGGGCACGTGACTGCTGAGCCACCCTaGTGGCCCCTGTCCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: VHDEDLATQNCVVPKGHVTAEPP*WPLSFG Trigger: ACCAAAGGACAGGGGCCACCAGGGTGGCTCAGCAGT...CACGTGCCCCTTTGGAACTACACAGTTCTGCGTGGCCAGATCTTCATCGTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCAGCTGGATGCTAGTGTTGCCCAGGTCTTCACTCACAAAATTCTCCAAGCTGCACCCAAGGTGTaGGCTGGAAGGGGGACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LQQLDASVAQVFTHKILQAAPKV*AGRGTR Trigger: TCTGGTCCCCCTTCCAGCGCACACCTTGGGTGCAGC...TTGGAGAATTTTGTGAGTGAAGACCTGGGCAACACTAGCATCCAGCTGCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAAAGACGTAGAGCTTTCGCAGCACGAAGCGGAGAAATCGCTCATGGAAAGGCCTTCCAAAAGAGGCTaGAGTTCTGGAGGCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SKDVELSQHEAEKSLMERPSKRG*SSGGRG Trigger: GCCCCTGCCTCCAGAACTTCAGCCTCTTTTGGAAGG...CCTTTCCATGAGCGATTTCTCCGCTTCGTGCTGCGAAAGCTCTACGTCTTTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
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| 3UTR CAA 90 bp | AGGGTCAAAAAGCTTGGGAAGCAGGAGGCTCAGGCAAGTGGCATATaGCTTCAGCATGTCTGCATGATCCTTCCATCGCCGGCTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RVKKLGKQEAQASGI*LQHVCMILPSPALC Trigger: ACACAGAGCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCTTCCCAAGCTTTTTGACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTGCATGATCCTTCCATCGCCGGCTCTGTGTGAATACCCCAGGGTTAAGAAGCCTATAACAGGCTaGCCCCACATCTGCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: HVCMILPSPALCEYPRVKKPITG*PHICTE Trigger: CTCTGTGCAGATGTGGGGGCAGCCTGTTATAGGCTT...CTTAACCCTGGGGTATTCACACAGAGCCGGCGATGGAAGGATCATGCAGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATTCCAGGACAGCCAGTaGTACACAGAGAGAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: TNHEFEASLGCTVKACPIFQDSQ*YTERDP Trigger: AGGGTCTCTCTCTGTGTAGCACTGGCTGTCCTGGAA...TATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACCCAGTGGGGCGTGGTaGCACACACCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: VVMSRAFNFSTQESWSGLPSGAW*HTPLIP Trigger: TGGGATTAAAGGTGTGTGCCACCACGCCCCACTGGG...TAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| 3UTR-3UTR CCA 90 bp | GAACTGTGTAGTTCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGCATTCAGCAAGGCCAGAGACGCAGTaGGTTCCTTTCACCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: ELCSSKGAREHSSFGHSARPETQ*VPFTWD Trigger: GTCCCAGGTGAAAGGAACCCACTGCGTCTCTGGCCT...TGCTGAATGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGAACTACACAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCCACATCTGCACAGAGCATCTGTACATCCCTCAGAACTCAGAGTGAACATGTTGGACCAGAGGTGTTaGCTCAGGGCCCCCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: PPHLHRASVHPSELRVNMLDQRC*LRAPFY Trigger: GTAAAAGGGGGCCCTGAGCCAACACCTCTGGTCCAA...CATGTTCACTCTGAGTTCTGAGGGATGTACAGATGCTCTGTGCAGATGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
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| 3UTR CAA 90 bp | AGCGGGAGTGCACCATCATGTCCCAGGAATAGCCATACAGCCCATTaGTCCAGTTATTGTAACCCTGGGTCAGGAAGTGGGAATAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SGSAPSCPRNSHTAH*SSYCNPGSGSGNRA Trigger: TGCCCTATTCCCACTTCCTGACCCAGGGTTACAATAACTGGACAAATGGGCTGTATGGCTATTCCTGGGACATGATGGTGCACTCCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATAAGCACTCAGGAGAGCTaGTCTGGTCTACATGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TNHEFEASLGCTVKACPISTQES*SGLHGE Trigger: TTCTCCATGTAGACCAGACCAGCTCTCCTGAGTGCT...TATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| 3UTR-3UTR GCA 90 bp | GCGTCGAAAGACGTAGAGCTTTCGCAGCACGAAGCGGAGAAATCGCTCATGGAAAGAGCTGCGAGTTCATaGAGTGAAAGTAGGACACGA | + |
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Preference number: 2 (lower is better) Translates to: ASKDVELSQHEAEKSLMERAASS*SESRTR Trigger: TCGTGTCCTACTTTCACTGCATGAACTCGCAGCTCT...TTCCATGAGCGATTTCTCCGCTTCGTGCTGCGAAAGCTCTACGTCTTTCGACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGTTTAATCCCAGCACTTaGGAGGCAGAGGCAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CPVPLISALRRAGLVYMEFNPST*EAEAGE Trigger: TTCTCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTTCAGGAGAGCTGGTCTaGTCTACATGGAGAAATCTT | + |
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Preference number: 2 (lower is better) Translates to: RGTNHEFEASLGCTVKACSGELV*STWRNL Trigger: AAGATTTCTCCATGTAGACCAGACCAGCTCTCCTGA...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| 3UTR-3UTR CCA 90 bp | GCACAGAGCATCTGTACATCCCTCAGAACTCAGAGTGAACATGCTCAGAATCTGTTGGACCAGAGGTGTTaGCTCAGGGCCCCCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: AQSICTSLRTQSEHAQNLLDQRC*LRAPFY Trigger: GTAAAAGGGGGCCCTGAGCCAACACCTCTGGTCCAA...CAGATTCTGAGCATGTTCACTCTGAGTTCTGAGGGATGTACAGATGCTCTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGCCTAATAGCAGGTTTCGGAGTGAAATTCGAGTCATCAGGAAGCTGCGTCGTCTGAGAAAAGTTTaGACCAGAGGTGTTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GRPNSRFRSEIRVIRKLRRLRKV*TRGVGS Trigger: TGAGCCAACACCTCTGGTCCAAACTTTTCTCAGACG...ACGCAGCTTCCTGATGACTCGAATTTCACTCCGAAACCTGCTATTAGGCCGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
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| 3UTR CAA 90 bp | ACCACCTCGGTGTGGTTGTCCAGACTGCTCTTAATATCCTGTAACTaGGTCCTCCAGGGAGATAAATCCATCAAGAGTGGCTGCACCCAA | + |
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Preference number: 2 (lower is better) Translates to: TTSVWLSRLLLISCN*VLQGDKSIKSGCTQ Trigger: TTGGGTGCAGCCACTCTTGATGGATTTATCTCCCTGGAGGACCAAGTTACAGGATATTAAGAGCAGTCTGGACAACCACACCGAGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCACGCAGAACTGTGTAGTTCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGGTACCAGTAGTGGTTTaGATCCATGAATGTCAACTG | + |
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Preference number: 2 (lower is better) Translates to: GHAELCSSKGAREHSSFGVPVVV*IHECQL Trigger: CAGTTGACATTCATGGATGCAAACCACTACTGGTAC...CCCGAAAGAAGAATGCTCACGTGCCCCTTTGGAACTACACAGTTCTGCGTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCGGCCTAATAGCAGGTTTCGGAGTGAAATTCGAGTCATCAGGAAGCTGCCGTCTGAGAAAAGTTTaGACCAGAGGTGTTGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KGGLIAGFGVKFESSGSCRLRKV*TRGVGS Trigger: TGAGCCAACACCTCTGGTCCAAACTTTTCTCAGACG...GCAGCTTCCTGATGACTCGAATTTCACTCCGAAACCTGCTATTAGGCCGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGGAGAAATCGCTCATGGAAAGGGCTATTTCGCCTGCGTTCAATTTCTTGGAGGGAGGCTCAGGCAAGTaGCATATTGCTTCAGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: AEKSLMERAISPAFNFLEGGSGK*HIASAC Trigger: ACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCC...CTCCAAGAAATTGAACGCAGGCGAAATAGCCCTTTCCATGAGCGATTTCTCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAATCGCTCATGGAAAGGGCTATTTCGCCTGCGTTCAATTTCTTGGAGCTTAAGCCTATAACAGGCTaGCCCCACATCTGCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EKSLMERAISPAFNFLELKPITG*PHICTE Trigger: CTCTGTGCAGATGTGGGGGCAGCCTGTTATAGGCTT...AAGCTCCAAGAAATTGAACGCAGGCGAAATAGCCCTTTCCATGAGCGATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCCCTGTCCTTTGGTTTCTGCTATCACTTCCACCTCACAGCAACTTCTATGAGTGGTTTGCATCCATaGATGTCAACTGAAAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: WPLSFGFCYHFHLTATSMSGLHP*MSTERP Trigger: TGGCCTTTCAGTTGACATTCATGGATGCAAACCACT...CATAGAAGTTGCTGTGAGGTGGAAGTGATAGCAGAAACCAAAGGACAGGGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATCGCTCATGGAAAGGGCTATTTCGCCTGCGTTCAATTTCTTGGAGCTTCCCTCAGAACTCAGAGTaGACATGCTCAGAATCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RNRSWKGLFRLRSISWSFPQNSE*TCSESG Trigger: GCCAGATTCTGAGCATGTTCACTCTGAGTTCTGAGG...GAAGCTCCAAGAAATTGAACGCAGGCGAAATAGCCCTTTCCATGAGCGATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR TCA 90 bp | GCGGAGAAATCGCTCATGGAAAGGGCTATTTCGCCTGCGTTCAATTTCTTGGAGACAAAATTCTCCAAGTaGAGCCCAGGGAAATCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: AEKSLMERAISPAFNFLETKFSK*SPGKSA Trigger: TGCAGATTTCCCTGGGCTTCACTTGGAGAATTTTGT...CTCCAAGAAATTGAACGCAGGCGAAATAGCCCTTTCCATGAGCGATTTCTCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR-3UTR GCA 90 bp | ACGCAGAACTGTGTAGTTCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGCATTACAGAAAGCAAAGTCTaGACCCCTGCAGTATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TQNCVVPKGHVSILLSGITESKV*TPAVSE Trigger: TTCAGATACTGCAGGGGTGCAGACTTTGCTTTCTGT...AATGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGAACTACACAGTTCTGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACTAGGTTTGGTGATCTATGTAATTACAAAACAGGCTGAAGCAGAGGGACCAAAGCCTATAACAGGCTaGCCCCACATCTGCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QLGLVIYVITKQAEAEGPKPITG*PHICTE Trigger: CTCTGTGCAGATGTGGGGGCAGCCTGTTATAGGCTT...TGGTCCCTCTGCTTCAGCCTGTTTTGTAATTACATAGATCACCAAACCTAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| 3UTR CAA 90 bp | CATGCTCAGAATCTGGCTCTGACGGGTGATTTGAAGAATCTGTGTTaGAAGCACTTGACTCATCAACTGGTTCAAATGGTCGCAAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HAQNLALTGDLKNLC*KHLTHQLVQMVASL Trigger: CAAACTTGCGACCATTTGAACCAGTTGATGAGTCAAGTGCTTCAAACACAGATTCTTCAAATCACCCGTCAGAGCCAGATTCTGAGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGGAGAAATCGCTCATGGAAAGGGCTATTTCGCCTGCGTTCAATTTCTTGGAGATCAACTGGTTCAAATaGTCGCAAGTTTGCATATGT | + |
|
Preference number: 2 (lower is better) Translates to: AEKSLMERAISPAFNFLEINWFK*SQVCIC Trigger: ACATATGCAAACTTGCGACCATTTGAACCAGTTGAT...CTCCAAGAAATTGAACGCAGGCGAAATAGCCCTTTCCATGAGCGATTTCTCCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR CAA 90 bp | AGAACTCAGAGTGAACATGCTCAGAATCTGGCTCTGACGGGTGATTaGAAGAATCTGTGTTTGAAGCACTTGACTCATCAACTGGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RTQSEHAQNLALTGD*KNLCLKHLTHQLVQ Trigger: TTGAACCAGTTGATGAGTCAAGTGCTTCAAACACAGATTCTTCAAATCACCCGTCAGAGCCAGATTCTGAGCATGTTCACTCTGAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCATCTGTACATCCCTCAGAACTCAGAGTGAACATGCTCAGAATCTGGCTCTGATCAACTGGTTCAAATaGTCGCAAGTTTGCATATGT | + |
|
Preference number: 2 (lower is better) Translates to: SICTSLRTQSEHAQNLALINWFK*SQVCIC Trigger: ACATATGCAAACTTGCGACCATTTGAACCAGTTGAT...CAGAGCCAGATTCTGAGCATGTTCACTCTGAGTTCTGAGGGATGTACAGATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR CAA 90 bp | AATCTGGCTCTGACGGGTGATTTGAAGAATCTGTGTTTGAAGCACTaGACTCATCAACTGGTTCAAATGGTCGCAAGTTTGCATATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: NLALTGDLKNLCLKH*THQLVQMVASLHMS Trigger: TGACATATGCAAACTTGCGACCATTTGAACCAGTTGATGAGTCAAGTGCTTCAAACACAGATTCTTCAAATCACCCGTCAGAGCCAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR GCA 72 bp | ACCCAAGGTGTGCGCTGGAAGGGGGACCAGACAGCCTaGACGATGTCCACACGAGGGTCAAAAAGCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TQGVRWKGDQTA*TMSTRGSKSLG Trigger: TCCCAAGCTTTTTGACCCTCGTGTGGACATCGTGCAGGCTGTCTGGTCCCCCTTCCAGCGCACACCTTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR CCA 72 bp | AAATCCATCAAGAGTGGCTGCACCCAAGGTGTGCGCTaGAAGGGGGACCAGACAGCCTGCACGATGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: KSIKSGCTQGVR*KGDQTACTMST Trigger: TGTGGACATCGTGCAGGCTGTCTGGTCCCCCTTCCAGCGCACACCTTGGGTGCAGCCACTCTTGATGGATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
||
| 3UTR GCA 72 bp | TTGGTCCTCCAGGGAGATAAATCCATCAAGAGTGGCTaGACCCAAGGTGTGCGCTGGAAGGGGGACCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LVLQGDKSIKSG*TQGVRWKGDQT Trigger: TGTCTGGTCCCCCTTCCAGCGCACACCTTGGGTGCAGCCACTCTTGATGGATTTATCTCCCTGGAGGACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
||
| 3UTR CCA 72 bp | GTTCCTTTCACCTGGGACAGCACTGCTGAGCCACCCTaGTGGCCCCTGTCCTTTGGTTTCTGCTATCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VPFTWDSTAEPP*WPLSFGFCYHF Trigger: GAAGTGATAGCAGAAACCAAAGGACAGGGGCCACCAGGGTGGCTCAGCAGTGCTGTCCCAGGTGAAAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTGCCACCAATTCCACGGTGACTTCTCCCTGCAGCAGCTGGATGCTAGTGTTTGGACCAGAGGTGTaGGCTCAGGGCCCCCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CSATNSTVTSPCSSWMLVFGPEV*AQGPLL Trigger: TAAAAGGGGGCCCTGAGCCAACACCTCTGGTCCAAA...CACTAGCATCCAGCTGCTGCAGGGAGAAGTCACCGTGGAATTGGTGGCAGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR CCA 72 bp | AGTGAAAGTAGGACACGAAGAACAGGCCGACGGGTCTaGAGGCATCAAAGAAGAGCAGGAAGCCAGCCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SESRTRRTGRRV*RHQRRAGSQPR Trigger: TCTCGGCTGGCTTCCTGCTCTTCTTTGATGCCTCCAGACCCGTCGGCCTGTTCTTCGTGTCCTACTTTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR GCA 72 bp | GGTCGCAAGTTTGCATATGTCACCTCTTGGGCTAGTTaGTCTAGGGAAGGGCGGCCTAATAGCAGGTTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GRKFAYVTSWAS*SREGRPNSRFR Trigger: CCGAAACCTGCTATTAGGCCGCCCTTCCCTAGAGCAACTAGCCCAAGAGGTGACATATGCAAACTTGCGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR GCA 72 bp | TTCTGTTCTGCCACCAATTCCACGGTGACTTCTCCCTaGAGCAGCTGGATGCTAGTGTTGCCCAGGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FCSATNSTVTSP*SSWMLVLPRSS Trigger: TGAAGACCTGGGCAACACTAGCATCCAGCTGCTGCAGGGAGAAGTCACCGTGGAATTGGTGGCAGAACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
||
| 3UTR CCA 72 bp | GCCACCAATTCCACGGTGACTTCTCCCTGCAGCAGCTaGATGCTAGTGTTGCCCAGGTCTTCACTCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ATNSTVTSPCSS*MLVLPRSSLTK Trigger: TTTTGTGAGTGAAGACCTGGGCAACACTAGCATCCAGCTGCTGCAGGGAGAAGTCACCGTGGAATTGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCACATCTGCACAGAGCATCTGTACATCCCTCAGAACTCAGAGTGAACATGTTTGGACCAGAGGTGTaGGCTCAGGGCCCCCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PPHLHRASVHPSELRVNMFGPEV*AQGPLL Trigger: TAAAAGGGGGCCCTGAGCCAACACCTCTGGTCCAAA...CATGTTCACTCTGAGTTCTGAGGGATGTACAGATGCTCTGTGCAGATGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACACCCGCGATGAAGTACACGATGAAGATCTGGCCACGCAGAACTGTGTATCCGACAACACCAGCTaGAAGGGACTGAAGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LHTRDEVHDEDLATQNCVSDNTS*KGLKSQ Trigger: CTGGCTCTTCAGTCCCTTCAAGCTGGTGTTGTCGGA...TACACAGTTCTGCGTGGCCAGATCTTCATCGTGTACTTCATCGCGGGTGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGCATTCAGCAAGCCATCGTACTACCAGCAGGCTaGTCAGCTCCTCCGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: VVPKGHVSILLSGIQQAIVLPAG*SAPPTT Trigger: TGTTGTCGGAGGAGCTGACAAGCCTGCTGGTAGTAC...GATGGCTTGCTGAATGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGAACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR TCA 72 bp | CTCAGGCAAGTGGCATATTGCTTCAGCATGTCTGCATaGTCCTTCCATCGCCGGCTCTGTGTGAATACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRQVAYCFSMSA*SFHRRLCVNTP Trigger: TGGGGTATTCACACAGAGCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR GCA 72 bp | GCTGAGCCACCCTGGTGGCCCCTGTCCTTTGGTTTCTaGTATCACTTCCACCTCACAGCAACTTCTATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AEPPWWPLSFGF*YHFHLTATSMF Trigger: AAACATAGAAGTTGCTGTGAGGTGGAAGTGATAGCAGAAACCAAAGGACAGGGGCCACCAGGGTGGCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR GCA 72 bp | GAGGCTCAGGCAAGTGGCATATTGCTTCAGCATGTCTaGATGATCCTTCCATCGCCGGCTCTGTGTGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: EAQASGILLQHV*MILPSPALCEY Trigger: GTATTCACACAGAGCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR GCA 72 bp | TCTGCCTCTCTGGGCTCACACACAGAAAGCAAAGTCTaGACCCCTGCAGTATCTGAAAACAGCTATGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SASLGSHTESKV*TPAVSENSYVW Trigger: CCAGACATAGCTGTTTTCAGATACTGCAGGGGTGCAGACTTTGCTTTCTGTGTGTGAGCCCAGAGAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR CCA 72 bp | GGTTCAAATGGTCGCAAGTTTGCATATGTCACCTCTTaGGCTAGTTGCTCTAGGGAAGGGCGGCCTAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSNGRKFAYVTS*ASCSREGRPNS Trigger: GCTATTAGGCCGCCCTTCCCTAGAGCAACTAGCCCAAGAGGTGACATATGCAAACTTGCGACCATTTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR CCA 72 bp | GGTCAAAAAGCTTGGGAAGCAGGAGGCTCAGGCAAGTaGCATATTGCTTCAGCATGTCTGCATGATCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GQKAWEAGGSGK*HIASACLHDPS Trigger: GGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCTTCCCAAGCTTTTTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAGGAAGCTGCGTCGAAAGACGTAGAGCTTTCGCAGCACGAAGCGGAGAACTGTGTTTGAAGCACTaGACTCATCAACTGGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSGSCVERRRAFAARSGELCLKH*THQLVQ Trigger: TTGAACCAGTTGATGAGTCAAGTGCTTCAAACACAG...TTCTCCGCTTCGTGCTGCGAAAGCTCTACGTCTTTCGACGCAGCTTCCTGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGTGTAGTTCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGCATTCAGCACTGTGTTTGAAGCACTaGACTCATCAACTGGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ELCSSKGAREHSSFGHSALCLKH*THQLVQ Trigger: TTGAACCAGTTGATGAGTCAAGTGCTTCAAACACAG...TGCTGAATGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGAACTACACAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGCATTCAGCAAGCCATCCACAGTTGAAGAATCTGTGTTaGAAGCACTTGACTCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SKGAREHSSFGHSASHPQLKNLC*KHLTHQ Trigger: TTGATGAGTCAAGTGCTTCAAACACAGATTCTTCAA...CTGTGGATGGCTTGCTGAATGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| 3UTR TCA 72 bp | CCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTaGAAGCCTGTCCCATATCATTTTTCTCCAAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: PTMSLRPAWAVL*KPVPYHFSPKI Trigger: TATTTTTGGAGAAAAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTGGTTTCTGCTATCACTTCCACCTCACAGCAACTTCTATGTTTGGCTATTTGTTCCACGAAGTCTaGTCCAGGAGAAACACGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SFGFCYHFHLTATSMFGYLFHEV*SRRNTY Trigger: GTACGTGTTTCTCCTGGACAAGACTTCGTGGAACAA...ATAGCCAAACATAGAAGTTGCTGTGAGGTGGAAGTGATAGCAGAAACCAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR GCA 72 bp | TACAGGAGAGGATATACCAAGGTACCAGTAGTGGTTTaGATCCATGAATGTCAACTGAAAGGCCAACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: YRRGYTKVPVVV*IHECQLKGQQT Trigger: GGTTTGTTGGCCTTTCAGTTGACATTCATGGATGCAAACCACTACTGGTACCTTGGTATATCCTCTCCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR TCA 72 bp | GTTGACATAGACGTACATGTAGCAGGAAGGACTAGATaGTACAGTATAGACTTTATGGTACTCTCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VDIDVHVAGRTR*YSIDFMVLSSR Trigger: CCTGCTGGAGAGTACCATAAAGTCTATACTGTATCATCTAGTCCTTCCTGCTACATGTACGTCTATGTCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207000.2 ENSMUST00000207012.2 |
||
| 3UTR CCA 72 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTaGTCTGGTCTACATGGAGAAATCTTGTCTATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: MSRAFNFSTQES*SGLHGEILSIK Trigger: TTTTATAGACAAGATTTCTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| 3UTR TCA 72 bp | AGGATATACCAAGGTACCAGTAGTGGTTTGCATCCATaGATGTCAACTGAAAGGCCAACAAACCATACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RIYQGTSSGLHP*MSTERPTNHTD Trigger: ATCTGTATGGTTTGTTGGCCTTTCAGTTGACATTCATGGATGCAAACCACTACTGGTACCTTGGTATATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| 3UTR CAA 72 bp | ACTAGGCCGAGGAGCGGCTTTGGTGGGCAGCAGCTCTaGCAGCCTTTTCGGGCATCGGGCTACCAACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRPRSGFGGQQL*QPFRASGYQLP Trigger: CGGAAGTTGGTAGCCCGATGCCCGAAAAGGCTGCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGCCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGAAGCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGGCCGAGGAGCGGCTTTaGTGGGCAGCAGCTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAEAEGPTMSLRPAWAVLAEERL*WAAALA Trigger: TGCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGC...CAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGCTTCAGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGAAGCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGCCGAGGCCATTCAGCTaGGCAGAAGAGAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAEGPTMSLRPAWAVLPRPFS*AEERAA Trigger: AGCAGCCCTCTCTTCTGCTCAGCTGAATGGCCTCGG...CAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGCTTCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGAAGCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGGGAGGTAGAGCAGGGTaGAGATGGCTCCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAEGPTMSLRPAWAVLGGRAG*RWLPAG Trigger: ACCAGCTGGGAGCCATCTTCACCCTGCTCTACCTCC...CAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGCTTCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGATGGCTCCCAGCTGGTaGCGCAGCCCGGGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPVPLISALRRAGLVYMEMAPSW*RSPGFG Trigger: CCCGAAGCCCGGGCTGCGCCACCAGCTGGGAGCCAT...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGAAGCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGGTGGGAGCGGGAGTaGACCATCATGTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAEAEGPTMSLRPAWAVLWWERE*TIMSQE Trigger: TTCCTGGGACATGATGGTGCACTCCCGCTCCCACCA...CAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGCTTCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | GGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCTCCATCAAGAGTGGCTaGACCCAAGGTGTGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTNHEFEASLGCTVKACPSIKSG*TQGVRW Trigger: CCAGCGCACACCTTGGGTGCAGCCACTCTTGATGGA...GGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCAATTCCACGGTGACTTCTCCCTGCAGCAGCTGGATGCTAGTGTTGCCCATCTTTACGTGCTGGTaGGAGCGGGAGTGCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: ATNSTVTSPCSSWMLVLPIFTCW*ERECTI Trigger: GATGGTGCACTCCCGCTCCCACCAGCACGTAAAGAT...GGGCAACACTAGCATCCAGCTGCTGCAGGGAGAAGTCACCGTGGAATTGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207000.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGAAGCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTTGGACCAGAGGTGTTaGCTCAGGGCCCCCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QAEAEGPTMSLRPAWAVLLDQRC*LRAPFY Trigger: GTAAAAGGGGGCCCTGAGCCAACACCTCTGGTCCAA...CAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGCTTCAGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTGTTCTGCCACCAATTCCACGGTGACTTCTCCCTGCAGCAGCTGGATGGGCCGTCGCGGTAGGTaGTCTTTACGTGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFCSATNSTVTSPCSSWMGRRGR*SLRAGG Trigger: CCCACCAGCACGTAAAGATCACCTACCGCGACGGCC...CATCCAGCTGCTGCAGGGAGAAGTCACCGTGGAATTGGTGGCAGAACAGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207000.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGAAGCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGCAGCATCATGCCCAGTaGCCCCAGAAACATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAEGPTMSLRPAWAVLQHHAQ*PQKHDG Trigger: ACCATCATGTTTCTGGGGGCACTGGGCATGATGCTG...CAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGCTTCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | CATGGAGTAGCCCCCAACCCAGTCAGCATCGAGCTTCTTCACACCCGCGATGAAATACATCCAGTCCAGTaGCAGTGGGCGCAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HGVAPNPVSIELLHTRDEIHPVQ*QWAQGI Trigger: GATGCCTTGCGCCCACTGCCACTGGACTGGATGTAT...TTCATCGCGGGTGTGAAGAAGCTCGATGCTGACTGGGTTGGGGGCTACTCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATAAGATGGCTCCCAGCTaGTGGCGCAGCCCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VMSRAFNFSTQESWSGLHKMAPS*WRSPGF Trigger: GAAGCCCGGGCTGCGCCACCAGCTGGGAGCCATCTT...ATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| 3UTR CAA 72 bp | TTATACACACAGGAAGCACTAGGCCGAGGAGCGGCTTaGGTGGGCAGCAGCTCTTGCAGCCTTTTCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYTQEALGRGAA*VGSSSCSLFGH Trigger: ATGCCCGAAAAGGCTGCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGCCTAGTGCTTCCTGTGTGTATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGGCCGTCGCGGTAGGTaGTCTTTACGTGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSRAFNFSTQESWSGLHGGRRGR*SLRAGG Trigger: CCCACCAGCACGTAAAGATCACCTACCGCGACGGCC...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTTTCAGCATGTCTGCATaGTCCTTCCATCGCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGTNHEFEASLGCTVKACFSMSA*SFHRRL Trigger: GAGCCGGCGATGGAAGGATCATGCAGACATGCTGAA...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | GGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCGGGTCAAAAAGCCTCTaGTGGAAGCGGTCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GTNHEFEASLGCTVKACPGSKSL*WKRSLM Trigger: CATCAATGACCGCTTCCAGCAGAGGCTTTTTGACCC...GGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTGGGGACCAGACAGCCTaGACGATGTCCACACGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HEFEASLGCTVKACPISFGDQTA*TMSTRG Trigger: CCCTCGTGTGGACATCGTGCAGGCTGTCTGGTCCCC...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | ACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATACTAAGGCCGCGTTCCTaGGGAATGTCCAGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TNHEFEASLGCTVKACPILRPRS*GMSSSI Trigger: GATGCTGCTGGACATTCCCCAGGAACGCGGCCTTAG...TATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| CDS-3UTR CCA 90 bp | GGGCGGCCTAATAGCAGGTTTCGGAGTGAAATTCGAGTCATCAGGAAGCTGCGTCTAAGGCCGCGTTCCTaGGGAATGTCCAGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GRPNSRFRSEIRVIRKLRLRPRS*GMSSSI Trigger: GATGCTGCTGGACATTCCCCAGGAACGCGGCCTTAG...ACGCAGCTTCCTGATGACTCGAATTTCACTCCGAAACCTGCTATTAGGCCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTTCCAAAGGGGCACGTGAGCATTCTTCTTTCGGGCATTCAGCAAGCCATCCCAGTCCAGTGGCAGTaGGCGCAAGGCATCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVPKGHVSILLSGIQQAIPVQWQ*AQGIQQ Trigger: TTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGG...GATGGCTTGCTGAATGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGAACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132995.2 ENSMUST00000207012.2 |
||
| CDS-3UTR GCA 90 bp | ACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATAACGGTGACTTCTCCCTaGAGCAGCTGGATGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TNHEFEASLGCTVKACPITVTSP*SSWMLV Trigger: CACTAGCATCCAGCTGCTGCAGGGAGAAGTCACCGT...TATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTCCAGTCCAGTGGCAGTaGGCGCAAGGCATCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HEFEASLGCTVKACPISFPVQWQ*AQGIQQ Trigger: TTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGG...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | GTAGTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTAGGGACAGGTGCTCCATaGAGTAGCCCCCAACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVMSRAFNFSTQESWSGLGTGAP*SSPQPS Trigger: ACTGGGTTGGGGGCTACTCCATGGAGCACCTGTCCC...TAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCACTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | GGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCCGTCTGAGAAAAGTTTaGACCAGAGGTGTTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTNHEFEASLGCTVKACPRLRKV*TRGVGS Trigger: TGAGCCAACACCTCTGGTCCAAACTTTTCTCAGACG...GGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGGCTGCTGGCCAGCATaGCATAGGGAAACATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: MSRAFNFSTQESWSGLHGGCWPA*HRETSR Trigger: TCGGGATGTTTCCCTATGTCATGCTGGCCAGCAGCC...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGACCTTCCAAAAGAGGCTaGAGTTCTGGAGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSRAFNFSTQESWSGLHGPSKRG*SSGGRG Trigger: GCCCCTGCCTCCAGAACTTCAGCCTCTTTTGGAAGG...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | CCCACATCTGCACAGAGCATCTGTACATCCCTCAGAACTCAGAGTGAACATGCTCTAAGGCCGCGTTCCTaGGGAATGTCCAGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PTSAQSICTSLRTQSEHALRPRS*GMSSSI Trigger: GATGCTGCTGGACATTCCCCAGGAACGCGGCCTTAG...AGCATGTTCACTCTGAGTTCTGAGGGATGTACAGATGCTCTGTGCAGATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGATCTTTACGTGCTGGTaGGAGCGGGAGTGCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPVPLISALRRAGLVYMEIFTCW*ERECTI Trigger: GATGGTGCACTCCCGCTCCCACCAGCACGTAAAGAT...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTGTGCCCCCAGAAACATaGTGGTGTAGACAAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: RGTNHEFEASLGCTVKACVPPET*WCRQDT Trigger: TGTATCTTGTCTACACCATCATGTTTCTGGGGGCAC...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGTTCCAAAGGGGCACGTaGGCATTCTTCTTTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPVPLISALRRAGLVYMEFQRGT*AFFFRA Trigger: TGCCCGAAAGAAGAATGCTCACGTGCCCCTTTGGAA...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTATAGCCCCAGCATCATaGCCAGTGCCCCCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HEFEASLGCTVKACPISFIAPAS*PVPPET Trigger: TGTTTCTGGGGGCACTGGGCATGATGCTGGGGCTAT...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTTCGCAGCACGAAGCGGAGAAATCGCTCATGGAAAGGGCTATTTCGCCTGGTTTGCAGGGTCCGTTaGTTTGTTAAGCAGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFRSTKRRNRSWKGLFRLVCRVR*FVKQGH Trigger: GTGACCCTGCTTAACAAACCAACGGACCCTGCAAAC...CAGGCGAAATAGCCCTTTCCATGAGCGATTTCTCCGCTTCGTGCTGCGAAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205738.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGCAAAGTCTGCACCCCTGCAGTATCTGAAAACAGCTATGTCTGGCTTTCCAGTCCAGTGGCAGTaGGCGCAAGGCATCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKAKSAPLQYLKTAMSGFPVQWQ*AQGIQQ Trigger: TTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGG...AAAGCCAGACATAGCTGTTTTCAGATACTGCAGGGGTGCAGACTTTGCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATATACATCCAGTCCAGTaGCAGTGGGCGCAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VMSRAFNFSTQESWSGLHIHPVQ*QWAQGI Trigger: GATGCCTTGCGCCCACTGCCACTGGACTGGATGTAT...ATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCAATGAAGACCACCTCGGTGTGGTTGTCCAGACTGCTCTTAATATCCTGTGTGATCTTTACGTGCTaGTGGGAGCGGGAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SAMKTTSVWLSRLLLISCVIFTC*WERECT Trigger: GGTGCACTCCCGCTCCCACCAGCACGTAAAGATCAC...ACAGGATATTAAGAGCAGTCTGGACAACCACACCGAGGTGGTCTTCATTGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207000.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTAGTGGTTTGCATCCATaGATGTCAACTGAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGTNHEFEASLGCTVKACSGLHP*MSTERP Trigger: TGGCCTTTCAGTTGACATTCATGGATGCAAACCACT...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGAGATCTGGGGCTCAGTaGCATTGTACTTGGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPVPLISALRRAGLVYMERSGAQ*HCTWEA Trigger: TGCTTCCCAAGTACAATGTCACTGAGCCCCAGATCT...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGACAGGGAAATCTGCAATaGAGACCACCTCGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSRAFNFSTQESWSGLHGQGNLQ*RPPRCG Trigger: ACCACACCGAGGTGGTCTTCATTGCAGATTTCCCTG...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGGTGGCCCCTGTCCTTTGGTTTCTGCTATCACTTCCACCTCACAGCAACTCTGGGACCAGAAACATaGTGGTGTAGACAAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: PWWPLSFGFCYHFHLTATLGPET*WCRQDT Trigger: TGTATCTTGTCTACACCATCATGTTTCTGGTCCCAG...AGTTGCTGTGAGGTGGAAGTGATAGCAGAAACCAAAGGACAGGGGCCACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| CDS-3UTR GCA 90 bp | CAACTAGGTTTGGTGATCTATGTAATTACAAAACAGGCTGAAGCAGAGGGACCAGCTGCACCCAAGGTGTaGGCTGGAAGGGGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLGLVIYVITKQAEAEGPAAPKV*AGRGTR Trigger: TCTGGTCCCCCTTCCAGCGCACACCTTGGGTGCAGC...TGGTCCCTCTGCTTCAGCCTGTTTTGTAATTACATAGATCACCAAACCTAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCTGATTTTTCTGTTCTaGCACCAATTCCACGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGTNHEFEASLGCTVKACLIFLF*HQFHGD Trigger: GTCACCGTGGAATTGGTGGCAGAACAGAAAAATCAG...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGAAGACCACCTCGGTGTaGTTGTCCAGACTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CPVPLISALRRAGLVYMEKTTSV*LSRLLL Trigger: TAAGAGCAGTCTGGACAACCACACCGAGGTGGTCTT...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| 3UTR CAA 72 bp | GCACCATCATGTCCCAGGAATAGCCATACAGCCCATTaGTCCAGTTATTGTAACCCTGGGTCAGGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APSCPRNSHTAH*SSYCNPGSGSG Trigger: CCCACTTCCTGACCCAGGGTTACAATAACTGGACAAATGGGCTGTATGGCTATTCCTGGGACATGATGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| CDS-3UTR TCA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTGCCCTGTTTCAGTCCTaGTGTCTGTGCAGACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HEFEASLGCTVKACPISFALFQS*CLCRLV Trigger: AACAAGTCTGCACAGACATCAGGACTGAAACAGGGC...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCGGCCTAATAGCAGGTTTCGGAGTGAAATTCGAGTCATCAGGAAGCTGCTTTTCTCCATTCGGCTaGCCTGTTTCAGTCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KGGLIAGFGVKFESSGSCFSPFG*PVSVLM Trigger: CATCAGGACTGAAACAGGGCAGCCGAATGGAGAAAA...GCAGCTTCCTGATGACTCGAATTTCACTCCGAAACCTGCTATTAGGCCGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205738.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTACTCTCCAGCAGGCAACTGCATTTTCTCTCCTTCTTGAAGAGTCTGATTTGGTGGGAGCGGGAGTaGACCATCATGTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MVLSSRQLHFLSFLKSLIWWERE*TIMSQE Trigger: TTCCTGGGACATGATGGTGCACTCCCGCTCCCACCA...AATCAGACTCTTCAAGAAGGAGAGAAAATGCAGTTGCCTGCTGGAGAGTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207000.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTTTGCTTCAGCATGTCTaGATGATCCTTCCATCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HEFEASLGCTVKACPISFLLQHV*MILPSP Trigger: CGGCGATGGAAGGATCATGCAGACATGCTGAAGCAA...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | GTAGTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTAAAGCCCAGGGAAATCTaGAATGAAGACCACCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVMSRAFNFSTQESWSGLKPREI*NEDHLG Trigger: ACCGAGGTGGTCTTCATTGCAGATTTCCCTGGGCTT...TAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAAGATATGCCAGGTCTTaGTCCAGTGCGACCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MSRAFNFSTQESWSGLHGRYARS*SSATSV Trigger: TACAGAGGTCGCACTGGAGCAAGACCTGGCATATCT...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | GTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGTTTGCAGGGTCCGTTaGTTTGTTAAGCAGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VMSRAFNFSTQESWSGLHVCRVR*FVKQGH Trigger: GTGACCCTGCTTAACAAACCAACGGACCCTGCAAAC...ATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | GTAGTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTAGGAGGCTCAGGCAAGTaGCATATTGCTTCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VVMSRAFNFSTQESWSGLGGSGK*HIASAC Trigger: ACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCC...TAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | GTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGCTGGAAGCGGTCATTaGTGGAGACCCAAATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VMSRAFNFSTQESWSGLHAGSGH*WRPKYQ Trigger: TTGATATTTGGGTCTCCATCAATGACCGCTTCCAGC...ATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGATTTTCTCCATTCGGCTaGCCTGTTTCAGTCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: MSRAFNFSTQESWSGLHGFSPFG*PVSVLM Trigger: CATCAGGACTGAAACAGGGCAGCCGAATGGAGAAAA...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | GTAGTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTAAGAGCTGCGAGTTCATaGAGTGAAAGTAGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: VVMSRAFNFSTQESWSGLRAASS*SESRTR Trigger: TCGTGTCCTACTTTCACTGCATGAACTCGCAGCTCT...TAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | AATAGCAGGTTTCGGAGTGAAATTCGAGTCATCAGGAAGCTGCGTCGAAAGACGAGATATGCCAGGTCTTaGTCCAGTGCGACCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSRFRSEIRVIRKLRRKTRYARS*SSATSV Trigger: TACAGAGGTCGCACTGGAGCAAGACCTGGCATATCT...CGTCTTTCGACGCAGCTTCCTGATGACTCGAATTTCACTCCGAAACCTGCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205738.2 |
||
| CDS-3UTR CCA 90 bp | CAACTAGGTTTGGTGATCTATGTAATTACAAAACAGGCTGAAGCAGAGGGACCAGTGATCTTTACGTGCTaGTGGGAGCGGGAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QLGLVIYVITKQAEAEGPVIFTC*WERECT Trigger: GGTGCACTCCCGCTCCCACCAGCACGTAAAGATCAC...TGGTCCCTCTGCTTCAGCCTGTTTTGTAATTACATAGATCACCAAACCTAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CCA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTTCAAAAAGCCTCTGCTaGAAGCGGTCATTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HEFEASLGCTVKACPISFSKSLC*KRSLME Trigger: CTCCATCAATGACCGCTTCCAGCAGAGGCTTTTTGA...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGTCCATGAATGTCAACTaGAAGGCCAACAAACCATAC | + |
|
Preference number: 4 (lower is better) Translates to: CPVPLISALRRAGLVYMESMNVN*KANKPY Trigger: GTATGGTTTGTTGGCCTTTCAGTTGACATTCATGGA...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTACAAAATTCTCCAAGTaGAGCCCAGGGAAATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HEFEASLGCTVKACPISFTKFSK*SPGKSA Trigger: TGCAGATTTCCCTGGGCTTCACTTGGAGAATTTTGT...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGAGACCAGTAGTGGTTTaGATCCATGAATGTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: CPVPLISALRRAGLVYMERPVVV*IHECQL Trigger: CAGTTGACATTCATGGATGCAAACCACTACTGGTCT...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR TCA 90 bp | CTATTTCGCCTGCGTTCAATTTCTTGGAGCTTCCTCTGTCGTCTGAGAAAAGTTGCCCTGTTTCAGTCCTaGTGTCTGTGCAGACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFRLRSISWSFLCRLRKVALFQS*CLCRLV Trigger: AACAAGTCTGCACAGACATCAGGACTGAAACAGGGC...AACTTTTCTCAGACGACAGAGGAAGCTCCAAGAAATTGAACGCAGGCGAAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205738.2 |
||
| 3UTR CAA 72 bp | CTCATGGAAAGGGCTATTTCGCCTGCGTTCAATTTCTaGGAGCTTCCTCTGTCGTCTGAGAAAAGTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMERAISPAFNF*ELPLSSEKSLD Trigger: GTCCAAACTTTTCTCAGACGACAGAGGAAGCTCCAAGAAATTGAACGCAGGCGAAATAGCCCTTTCCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| 3UTR CAA 72 bp | CACTTGACTCATCAACTGGTTCAAATGGTCGCAAGTTaGCATATGTCACCTCTTGGGCTAGTTGCTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTHQLVQMVAS*HMSPLGLVALG Trigger: CCCTAGAGCAACTAGCCCAAGAGGTGACATATGCAAACTTGCGACCATTTGAACCAGTTGATGAGTCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGCAGGAAGGACTAGATaGTACAGTATAGACTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: MSRAFNFSTQESWSGLHGAGRTR*YSIDFM Trigger: CATAAAGTCTATACTGTATCATCTAGTCCTTCCTGC...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR GCA 90 bp | GTAGTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTATTCTCCTTTAATTCTTaGAGATATGCCAGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVMSRAFNFSTQESWSGLFSFNS*RYARSC Trigger: GCAAGACCTGGCATATCTGCAAGAATTAAAGGAGAA...TAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| 3UTR CAA 72 bp | AATCTGGCTCTGACGGGTGATTTGAAGAATCTGTGTTaGAAGCACTTGACTCATCAACTGGTTCAAATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLALTGDLKNLC*KHLTHQLVQMV Trigger: GACCATTTGAACCAGTTGATGAGTCAAGTGCTTCAAACACAGATTCTTCAAATCACCCGTCAGAGCCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205738.2 ENSMUST00000207012.2 |
||
| CDS-3UTR CCA 90 bp | CAACTAGGTTTGGTGATCTATGTAATTACAAAACAGGCTGAAGCAGAGGGACCAATCAACTGGTTCAAATaGTCGCAAGTTTGCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGLVIYVITKQAEAEGPINWFK*SQVCIC Trigger: ACATATGCAAACTTGCGACCATTTGAACCAGTTGAT...TGGTCCCTCTGCTTCAGCCTGTTTTGTAATTACATAGATCACCAAACCTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS CCA 90 bp | CACCACCACAGGCCCAGCTTCCCTGGGAATCCAGTCCAGTGGCAGTaGGCGCAAGGCATCCAGCAAGGGGAAACGGCACACATCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HHHRPSFPGNPVQWQ*AQGIQQGETAHIQP Trigger: GGGCTGGATGTGTGCCGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATTCCCAGGGAAGCTGGGCCTGTGGTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| CDS CCA 90 bp | AAGTGTCACCACCACAGGCCCAGCTTCCCTGGGAATCCAGTCCAGTaGCAGTGGGCGCAAGGCATCCAGCAAGGGGAAACGGCACACATC | + |
|
Preference number: 5 (lower is better) Translates to: KCHHHRPSFPGNPVQ*QWAQGIQQGETAHI Trigger: GATGTGTGCCGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATTCCCAGGGAAGCTGGGCCTGTGGTGGTGACACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
||
| CDS-3UTR CAA 90 bp | ACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATAGGCCGAGGAGCGGCTTaGGTGGGCAGCAGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TNHEFEASLGCTVKACPIGRGAA*VGSSSC Trigger: GCAAGAGCTGCTGCCCACCAAAGCCGCTCCTCGGCC...TATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTGGCTTCGGGCCAGCTTaGCCCCGGGACCTCTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: RGTNHEFEASLGCTVKACGFGPA*PRDLLY Trigger: GTATAAGAGGTCCCGGGGCAAAGCTGGCCCGAAGCC...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | GGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCGCAGGGTCCGTTGGTTaGTTAAGCAGGGTCACGACA | + |
|
Preference number: 5 (lower is better) Translates to: GTNHEFEASLGCTVKACPAGSVG*LSRVTT Trigger: TGTCGTGACCCTGCTTAACAAACCAACGGACCCTGC...GGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCTGGGGCTCAGTGACATaGTACTTGGGAAGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTNHEFEASLGCTVKACPWGSVT*YLGSRR Trigger: CCTCCTGCTTCCCAAGTACAATGTCACTGAGCCCCA...GGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGAAGCAGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGGAAAGACAGCCAGGTTaGCAGGGTCCGTTGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QAEAEGPTMSLRPAWAVLERQPG*QGPLVC Trigger: ACAAACCAACGGACCCTGCAAACCTGGCTGTCTTTC...CAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCTGCTTCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCTCAGTGACATTGTACTaGGGAAGCAGGAGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTNHEFEASLGCTVKACPSVTLY*GSRRLR Trigger: CCTGAGCCTCCTGCTTCCCAAGTACAATGTCACTGA...GGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS CCA 90 bp | CAGAAACATGATGGTGTAGACAAGATACATCCAGTCCAGTGGCAGTaGGCGCAAGGCATCCAGCAAGGGGAAACGGCACACATCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QKHDGVDKIHPVQWQ*AQGIQQGETAHIQP Trigger: GGGCTGGATGTGTGCCGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATGTATCTTGTCTACACCATCATGTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000132995.2 |
||
| CDS CCA 90 bp | TGCCCCCAGAAACATGATGGTGTAGACAAGATACATCCAGTCCAGTaGCAGTGGGCGCAAGGCATCCAGCAAGGGGAAACGGCACACATC | + |
|
Preference number: 5 (lower is better) Translates to: CPQKHDGVDKIHPVQ*QWAQGIQQGETAHI Trigger: GATGTGTGCCGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATGTATCTTGTCTACACCATCATGTTTCTGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTGCAGGGTCCGTTGGTTaGTTAAGCAGGGTCACGACA | + |
|
Preference number: 5 (lower is better) Translates to: RGTNHEFEASLGCTVKACAGSVG*LSRVTT Trigger: TGTCGTGACCCTGCTTAACAAACCAACGGACCCTGC...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGGTGGGCAGCAGCTCTaGCAGCCTTTTCGGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: MSRAFNFSTQESWSGLHGGGQQL*QPFRAS Trigger: CGATGCCCGAAAAGGCTGCAAGAGCTGCTGCCCACC...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCAGATATGCCAGGTCTaGCTCCAGTGCGACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGTNHEFEASLGCTVKACQICQV*LQCDLC Trigger: ACAGAGGTCGCACTGGAGCAAGACCTGGCATATCTG...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| CDS CCA 90 bp | TGGGACCAGAAACATGATGGTGTAGACAAGATACATCCAGTCCAGTaGCAGTGGGCGCAAGGCATCCAGCAAGGGGAAACGGCACACATC | + |
|
Preference number: 5 (lower is better) Translates to: WDQKHDGVDKIHPVQ*QWAQGIQQGETAHI Trigger: GATGTGTGCCGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATGTATCTTGTCTACACCATCATGTTTCTGGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132995.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTAGCTGGATGCTAGTGTaGCCCAGGTCTTCACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RGTNHEFEASLGCTVKACSWMLV*PRSSLT Trigger: TGTGAGTGAAGACCTGGGCAACACTAGCATCCAGCT...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGGTACTACCAGCAGGCTaGTCAGCTCCTCCGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: CPVPLISALRRAGLVYMEVLPAG*SAPPTT Trigger: TGTTGTCGGAGGAGCTGACAAGCCTGCTGGTAGTAC...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGAGTTTGGACCAGAGGTGTaGGCTCAGGGCCCCCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CPVPLISALRRAGLVYMEFGPEV*AQGPLL Trigger: TAAAAGGGGGCCCTGAGCCAACACCTCTGGTCCAAA...CTCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGATCCGACAACACCAGCTaGAAGGGACTGAAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MSRAFNFSTQESWSGLHGSDNTS*KGLKSQ Trigger: CTGGCTCTTCAGTCCCTTCAAGCTGGTGTTGTCGGA...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | GGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCCTGTGTTTGAAGCACTaGACTCATCAACTGGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTNHEFEASLGCTVKACPLCLKH*THQLVQ Trigger: TTGAACCAGTTGATGAGTCAAGTGCTTCAAACACAG...GGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTAGCCATACAGCCCATTaGTCCAGTTATTGTAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGTNHEFEASLGCTVKACSHTAH*SSYCNP Trigger: AGGGTTACAATAACTGGACAAATGGGCTGTATGGCT...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | ACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATGCTGGAAGCGGTCATaGATGGAGACCCAAATATCA | + |
|
Preference number: 5 (lower is better) Translates to: TNHEFEASLGCTVKACPICWKRS*METQIS Trigger: TGATATTTGGGTCTCCATCAATGACCGCTTCCAGCA...TATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATGGACAGGCAAGTGGCATATaGCTTCAGCATGTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: MSRAFNFSTQESWSGLHGQASGI*LQHVCM Trigger: CATGCAGACATGCTGAAGCAATATGCCACTTGCCTG...TCCATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | AGAAATCGCTCATGGAAAGGGCTATTTCGCCTGCGTTCAATTTCTTGGAGCTTCCAGATATGCCAGGTCTaGCTCCAGTGCGACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RNRSWKGLFRLRSISWSFQICQV*LQCDLC Trigger: ACAGAGGTCGCACTGGAGCAAGACCTGGCATATCTG...GAAGCTCCAAGAAATTGAACGCAGGCGAAATAGCCCTTTCCATGAGCGATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205738.2 |
||
| CDS-3UTR CAA 90 bp | GTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATTTGTTCCACGAAGTCTaGTCCAGGAGAAACACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VMSRAFNFSTQESWSGLHLFHEV*SRRNTY Trigger: GTACGTGTTTCTCCTGGACAAGACTTCGTGGAACAA...ATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGGACCAACCATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTGATGTCTGTGCAGACTaGTTTTTCTGTACTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: RGTNHEFEASLGCTVKACDVCAD*FFCTLS Trigger: AGATAAAGTACAGAAAAACAAGTCTGCACAGACATC...ACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATGGTTGGTCCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCAGCTGGATGCTAGTGTTGCCCAGGTCTTCACTCACAAAATTCTCCAAAGCCATACAGCCCATTaGTCCAGTTATTGTAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQQLDASVAQVFTHKILQSHTAH*SSYCNP Trigger: AGGGTTACAATAACTGGACAAATGGGCTGTATGGCT...TTGGAGAATTTTGTGAGTGAAGACCTGGGCAACACTAGCATCCAGCTGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207000.2 |
||
| CDS TCA 90 bp | GGGCATTCAGCAAGCCATCCACAGACCAGTAGTGGTTTGCATCCATaGATGTCAACTGAAAGGCCAACAAACCATACAGATAGGAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHSASHPQTSSGLHP*MSTERPTNHTDRSD Trigger: ATCACTCCTATCTGTATGGTTTGTTGGCCTTTCAGTTGACATTCATGGATGCAAACCACTACTGGTCTGTGGATGGCTTGCTGAATGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS GCA 90 bp | CTTCTTTCGGGCATTCAGCAAGCCATCCACAGACCAGTAGTGGTTTaGATCCATGAATGTCAACTGAAAGGCCAACAAACCATACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLSGIQQAIHRPVVV*IHECQLKGQQTIQI Trigger: TATCTGTATGGTTTGTTGGCCTTTCAGTTGACATTCATGGATGCAAACCACTACTGGTCTGTGGATGGCTTGCTGAATGCCCGAAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
||
| CDS-3UTR CAA 90 bp | TCGAAAGACGTAGAGCTTTCGCAGCACGAAGCGGAGAAATCGCTCATGGAAAGGGATGTCTGTGCAGACTaGTTTTTCTGTACTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SKDVELSQHEAEKSLMERDVCAD*FFCTLS Trigger: AGATAAAGTACAGAAAAACAAGTCTGCACAGACATC...CCTTTCCATGAGCGATTTCTCCGCTTCGTGCTGCGAAAGCTCTACGTCTTTCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205738.2 |
||
| CDS-3UTR CAA 90 bp | CATGAGTTTGAGGCCAGCCTGGGCTGTACTGTGAAAGCCTGTCCCATATCATTTTTAATATCCTGTAACTaGGTCCTCCAGGGAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: HEFEASLGCTVKACPISFLISCN*VLQGDK Trigger: TTTATCTCCCTGGAGGACCAAGTTACAGGATATTAA...AAATGATATGGGACAGGCTTTCACAGTACAGCCCAGGCTGGCCTCAAACTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS-3UTR CAA 90 bp | GTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATCATTTTCTCTCCTTCTaGAAGAGTCTGATTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: VMSRAFNFSTQESWSGLHHFLSF*KSLIFL Trigger: CAGAAAAATCAGACTCTTCAAGAAGGAGAGAAAATG...ATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS-3UTR CAA 90 bp | GTGATGTCCCGTGCCTTTAATTTCAGCACTCAGGAGAGCTGGTCTGGTCTACATTTGAAGAATCTGTGTTaGAAGCACTTGACTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: VMSRAFNFSTQESWSGLHLKNLC*KHLTHQ Trigger: TTGATGAGTCAAGTGCTTCAAACACAGATTCTTCAA...ATGTAGACCAGACCAGCTCTCCTGAGTGCTGAAATTAAAGGCACGGGACATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS CCA 72 bp | CACCACAGGCCCAGCTTCCCTGGGAATCCAGTCCAGTaGCAGTGGGCGCAAGGCATCCAGCAAGGGGAAACG | + |
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Preference number: 6 (lower is better) Translates to: HHRPSFPGNPVQ*QWAQGIQQGET Trigger: CGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATTCCCAGGGAAGCTGGGCCTGTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207012.2 |
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| CDS GCA 72 bp | ACCCAAGGTGTGCGCTGGAAGGGGGACCAGACAGCCTaGACGATGTCCACACGAGGGTCAAAAAGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TQGVRWKGDQTA*TMSTRGSKSLC Trigger: GCAGAGGCTTTTTGACCCTCGTGTGGACATCGTGCAGGCTGTCTGGTCCCCCTTCCAGCGCACACCTTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS CCA 72 bp | GATGGTGTAGACAAGATACATCCAGTCCAGTGGCAGTaGGCGCAAGGCATCCAGCAAGGGGAAACGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: DGVDKIHPVQWQ*AQGIQQGETAH Trigger: GTGTGCCGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATGTATCTTGTCTACACCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000132995.2 |
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| CDS CAA 72 bp | GTACTTGGGAAGCAGGAGGCTCAGGCAAGTGGCATATaGCTTCAGCATGTCTGCATGATCCTTCCATCGCCG | + |
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Preference number: 6 (lower is better) Translates to: VLGKQEAQASGI*LQHVCMILPSP Trigger: CGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCTTCCCAAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS CCA 72 bp | GAGAAAACGAAAGACAGCCAGGTTTGCAGGGTCCGTTaGTTTGTTAAGCAGGGTCACGACACTCTGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: EKTKDSQVCRVR*FVKQGHDTLPA Trigger: AGCTGGCAGAGTGTCGTGACCCTGCTTAACAAACCAACGGACCCTGCAAACCTGGCTGTCTTTCGTTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
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| CDS CCA 72 bp | AAACATGATGGTGTAGACAAGATACATCCAGTCCAGTaGCAGTGGGCGCAAGGCATCCAGCAAGGGGAAACG | + |
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Preference number: 6 (lower is better) Translates to: KHDGVDKIHPVQ*QWAQGIQQGET Trigger: CGTTTCCCCTTGCTGGATGCCTTGCGCCCACTGCCACTGGACTGGATGTATCTTGTCTACACCATCATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000132995.2 |
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| CDS CAA 90 bp | AGTGACATTGTACTTGGGAAGCAGGAGGCTCAGGCAAGTGGCATATaGCTTCAGCATGTCTGCATGATCCTTCCATCGCCGGCTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SDIVLGKQEAQASGI*LQHVCMILPSPALC Trigger: ACACAGAGCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCTCCTGCTTCCCAAGTACAATGTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS CAA 90 bp | TTCTCCATTCGGCTGCCCTGTTTCAGTCCTGATGTCTGTGCAGACTaGTTTTTCTGTACTTTATCTGAGGCGGGAGCAACCAGTGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: FSIRLPCFSPDVCAD*FFCTLSEAGATSAE Trigger: CTCCGCACTGGTTGCTCCCGCCTCAGATAAAGTACAGAAAAACAAGTCTGCACAGACATCAGGACTGAAACAGGGCAGCCGAATGGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
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| CDS CCA 72 bp | AAGTATTTTCGGTCCAGGGAGCTAAGGCCGCGTTCCTaGGGAATGTCCAGCAGCATCAAGAAAGCAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: KYFRSRELRPRS*GMSSSIKKAKR Trigger: TCTCTTTGCTTTCTTGATGCTGCTGGACATTCCCCAGGAACGCGGCCTTAGCTCCCTGGACCGAAAATACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
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| CDS CAA 72 bp | AAACGAAAGACAGCCAGGTTTGCAGGGTCCGTTGGTTaGTTAAGCAGGGTCACGACACTCTGCCAGCTAGAT | + |
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Preference number: 6 (lower is better) Translates to: KRKTARFAGSVG*LSRVTTLCQLD Trigger: ATCTAGCTGGCAGAGTGTCGTGACCCTGCTTAACAAACCAACGGACCCTGCAAACCTGGCTGTCTTTCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
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| CDS TCA 72 bp | TGGAGACCCAAATATCAAAGTAGATCTGGGGCTCAGTaGCATTGTACTTGGGAAGCAGGAGGCTCAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: WRPKYQSRSGAQ*HCTWEAGGSGK Trigger: CTTGCCTGAGCCTCCTGCTTCCCAAGTACAATGTCACTGAGCCCCAGATCTACTTTGATATTTGGGTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS TCA 72 bp | CACGAGGGTCAAAAAGCCTCTGCTGGAAGCGGTCATTaGTGGAGACCCAAATATCAAAGTAGATCTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HEGQKASAGSGH*WRPKYQSRSGA Trigger: AGCCCCAGATCTACTTTGATATTTGGGTCTCCATCAATGACCGCTTCCAGCAGAGGCTTTTTGACCCTCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS CAA 90 bp | GCAAAGAGAAAACGAAAGACAGCCAGGTTTGCAGGGTCCGTTGGTTaGTTAAGCAGGGTCACGACACTCTGCCAGCTAGATAAATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AKRKRKTARFAGSVG*LSRVTTLCQLDKSV Trigger: GACAGATTTATCTAGCTGGCAGAGTGTCGTGACCCTGCTTAACAAACCAACGGACCCTGCAAACCTGGCTGTCTTTCGTTTTCTCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
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| CDS GCA 72 bp | GGCATTCAGCAAGCCATCCACAGACCAGTAGTGGTTTaGATCCATGAATGTCAACTGAAAGGCCAACAAACC | + |
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Preference number: 6 (lower is better) Translates to: GIQQAIHRPVVV*IHECQLKGQQT Trigger: GGTTTGTTGGCCTTTCAGTTGACATTCATGGATGCAAACCACTACTGGTCTGTGGATGGCTTGCTGAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS TCA 72 bp | GCAAGCCATCCACAGACCAGTAGTGGTTTGCATCCATaGATGTCAACTGAAAGGCCAACAAACCATACAGAT | + |
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Preference number: 6 (lower is better) Translates to: ASHPQTSSGLHP*MSTERPTNHTD Trigger: ATCTGTATGGTTTGTTGGCCTTTCAGTTGACATTCATGGATGCAAACCACTACTGGTCTGTGGATGGCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065906.9 |
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| CDS GCA 72 bp | CTGTCCATTCAAACCCTAAAATTTTCTCCATTCGGCTaGCCTGTTTCAGTCCTGATGTCTGTGCAGACTTGT | + |
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Preference number: 6 (lower is better) Translates to: LSIQTLKFSPFG*PVSVLMSVQTC Trigger: ACAAGTCTGCACAGACATCAGGACTGAAACAGGGCAGCCGAATGGAGAAAATTTTAGGGTTTGAATGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065906.9 ENSMUST00000205738.2 |
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