Pregenerated sensors for GGCT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002797Ensembl transcript IDs: ENSMUST00000131475.2, ENSMUST00000203208.2, ENSMUST00000204301.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATCGGATACAAGCAGAAAGCAGACCAAGCGCAGCAGTGCGCCCCTaGGCTACAGACCTACCCTCCACGGAGGTCGTCCACACAGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: DRIQAESRPSAAVRP*ATDLPSTEVVHTVG Trigger: CCCCACTGTGTGGACGACCTCCGTGGAGGGTAGGTCTGTAGCTCAGGGGCGCACTGCTGCGCTTGGTCTGCTTTCTGCTTGTATCCGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR GCA 90 bp | TACAAGCCGATCGGATACAAGCAGAAAGCAGACCAAGCGCAGCAGTaGGCCCCTGAGCTACAGACCTACCCTCCACGGAGGTCGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: YKPIGYKQKADQAQQ*APELQTYPPRRSST Trigger: TGTGGACGACCTCCGTGGAGGGTAGGTCTGTAGCTCAGGGGCGCACTGCTGCGCTTGGTCTGCTTTCTGCTTGTATCCGATCGGCTTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 90 bp | GCAGAGAGGCCAGAGGCCAGCCTTGGTGAGCCATCTATTTTTCCTTaGGACAGGATCTCTCTTCTCACCAGTCTGGGAACTCTCCGAGCA | + |
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Preference number: 1 (lower is better) Translates to: AERPEASLGEPSIFP*DRISLLTSLGTLRA Trigger: TGCTCGGAGAGTTCCCAGACTGGTGAGAAGAGAGATCCTGTCTCAAGGAAAAATAGATGGCTCACCAAGGCTGGCCTCTGGCCTCTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 90 bp | TTGGCTCCAGAGTCCACAATACCAGTTAACACAGACTCTATGAGCTaGGGCTGCTCTGTGTGGTCTGAGCAGAGCACAGTGAGGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LAPESTIPVNTDSMS*GCSVWSEQSTVRWS Trigger: GCTCCACCTCACTGTGCTCTGCTCAGACCACACAGAGCAGCCTCAGCTCATAGAGTCTGTGTTAACTGGTATTGTGGACTCTGGAGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR GCA 90 bp | GAGGTTACATCCCCATGGTTCCAATGGCACACTGAGACAGAGTGTTaGTGCCAGGTCCTTCCCAAGCTTTTTGACACGCATATGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: EVTSPWFQWHTETEC*CQVLPKLFDTHMVA Trigger: TGCCACCATATGCGTGTCAAAAAGCTTGGGAAGGACCTGGCAGCAACACTCTGTCTCAGTGTGCCATTGGAACCATGGGGATGTAACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR GCA 90 bp | CCAGTTCTCCATGAAGTGTGCCACTTGCTTCTGAAGTGTGCCGCTTaGTTCTGGGCTCCGCCATTTCTGATTGGAAACAATGTACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: PVLHEVCHLLLKCAA*FWAPPFLIGNNVPP Trigger: TGGGGGTACATTGTTTCCAATCAGAAATGGCGGAGCCCAGAAGCAAGCGGCACACTTCAGAAGCAAGTGGCACACTTCATGGAGAACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 90 bp | ACAGGAGCCATGCTAGTCCTTCCTAAGGACTCTGGTTTCTTATCCTaGACAGAAATGCCCCCGGTTAACGCTGCATTTGCACCCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: TGAMLVLPKDSGFLS*TEMPPVNAAFAPRT Trigger: TGTCCTGGGTGCAAATGCAGCGTTAACCGGGGGCATTTCTGTTCAGGATAAGAAACCAGAGTCCTTAGGAAGGACTAGCATGGCTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 90 bp | ACCCAGCTCCGAGCTTCTATGTTTGCTGCTTTCACTCGTGGGAACTaGGGTAAGCAAACAGGAGCCATGCTAGTCCTTCCTAAGGACTCT | + |
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Preference number: 1 (lower is better) Translates to: TQLRASMFAAFTRGN*GKQTGAMLVLPKDS Trigger: AGAGTCCTTAGGAAGGACTAGCATGGCTCCTGTTTGCTTACCTCAGTTCCCACGAGTGAAAGCAGCAAACATAGAAGCTCGGAGCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR GCA 90 bp | TTAGGATTCAAACGGGCTCCAGGATCTCTTAGCTTTTTGGTTTTCTaGTCACCCTGGCAGCTCTTACTCCATCACCCAGCTCACACCTCC | + |
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Preference number: 1 (lower is better) Translates to: LGFKRAPGSLSFLVF*SPWQLLLHHPAHTS Trigger: GGAGGTGTGAGCTGGGTGATGGAGTAAGAGCTGCCAGGGTGAGCAGAAAACCAAAAAGCTAAGAGATCCTGGAGCCCGTTTGAATCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CCA 90 bp | TGTATGTGTAAATCCAGGCTCTCTTCCAGGCCCCAATTGGCATGGTaGAAACAAGTCTACCACGTTTCTCTATGGCCTGCACGGAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: CMCKSRLSSRPQLAW*KQVYHVSLWPARSV Trigger: AACACTCCGTGCAGGCCATAGAGAAACGTGGTAGACTTGTTTCCACCATGCCAATTGGGGCCTGGAAGAGAGCCTGGATTTACACATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CCA 90 bp | CTCCATGAAGTGTGCCACTTGCTTCTGAAGTGTGCCGCTTGCTTCTaGGCTCCGCCATTTCTGATTGGAAACAATGTACCCCCAAAACTT | + |
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Preference number: 1 (lower is better) Translates to: LHEVCHLLLKCAACF*APPFLIGNNVPPKL Trigger: AAGTTTTGGGGGTACATTGTTTCCAATCAGAAATGGCGGAGCCCAGAAGCAAGCGGCACACTTCAGAAGCAAGTGGCACACTTCATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR GCA 90 bp | TCTGTAACTAGATGCAGGATGGCTGGGAGGCAAGACAATCCTGAATaGAAGGCCACTCTGGACTACAGAATAGGCTTAAGTCTCAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SVTRCRMAGRQDNPE*KATLDYRIGLSLKR Trigger: TCTTTTGAGACTTAAGCCTATTCTGTAGTCCAGAGTGGCCTTGCATTCAGGATTGTCTTGCCTCCCAGCCATCCTGCATCTAGTTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR GCA 90 bp | TCAGCTACTTTGTCCTTTGCAGACCTCAGGATGTTTTGGCTTCTCTaGAGGCTGGCCTCTTTCAATACGTCAGCTCTAATGTTAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: SATLSFADLRMFWLL*RLASFNTSALMLGF Trigger: GAATCCTAACATTAGAGCTGACGTATTGAAAGAGGCCAGCCTGCAGAGAAGCCAAAACATCCTGAGGTCTGCAAAGGACAAAGTAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CCA 90 bp | TGCCAGGTCCTTCCCAAGCTTTTTGACACGCATATGGTGGCAAAGTaGTTAGAGGATTTGTCTTATGCATGTGTATGTGTAAATCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: CQVLPKLFDTHMVAK*LEDLSYACVCVNPG Trigger: GCCTGGATTTACACATACACATGCATAAGACAAATCCTCTAACCACTTTGCCACCATATGCGTGTCAAAAAGCTTGGGAAGGACCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CCA 90 bp | TTCGCAGGAACCAAGGTCTCCACACACCTCCATTTTAAATTGTTGTaGGGTTTCTGTTGGTCATTTTTGAGAAGGCTTTACGATACAGAC | + |
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Preference number: 1 (lower is better) Translates to: FAGTKVSTHLHFKLL*GFCWSFLRRLYDTD Trigger: GTCTGTATCGTAAAGCCTTCTCAAAAATGACCAACAGAAACCCCACAACAATTTAAAATGGAGGTGTGTGGAGACCTTGGTTCCTGCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 90 bp | CCATTCCAGTTCTTTGTTACAGTTAAAAATAAAGAATCACCTATGTaGGAAGCCCTTCCCAGCACTGTTGAAAATCAAGGTCAGAACCAA | + |
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Preference number: 1 (lower is better) Translates to: PFQFFVTVKNKESPM*EALPSTVENQGQNQ Trigger: TTGGTTCTGACCTTGATTTTCAACAGTGCTGGGAAGGGCTTCTCACATAGGTGATTCTTTATTTTTAACTGTAACAAAGAACTGGAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 90 bp | CCAGCTAGTCTGGTAGTTTCCTTGTTTTGGAATATGATCATCAATTaGAATCAGAACATACTGGAGTTTTATAAGGCTCTGGATCTATTT | + |
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Preference number: 1 (lower is better) Translates to: PASLVVSLFWNMIIN*NQNILEFYKALDLF Trigger: AAATAGATCCAGAGCCTTATAAAACTCCAGTATGTTCTGATTTCAATTGATGATCATATTCCAAAACAAGGAAACTACCAGACTAGCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAGAGGGTATGCAGAGAGGCCAGAGGCCAGCCTTGGTGAGCCATCTATTTCCCACAACTGGAAAGTaGGAGGCTCAGCTAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VREGMQRGQRPALVSHLFPTTGK*EAQLAP Trigger: TGGGGCTAGCTGAGCCTCCCACTTTCCAGTTGTGGG...AAATAGATGGCTCACCAAGGCTGGCCTCTGGCCTCTCTGCATACCCTCTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR TCA 90 bp | ACTAGTCGAGCTATCTACCCAGCTCCGAGCTTCTATGTTTGCTGCTTTCACTCGCTGCTCTGTGTGGTCTaGGCAGAGCACAGTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TSRAIYPAPSFYVCCFHSLLCVV*AEHSEV Trigger: CACCTCACTGTGCTCTGCTCAGACCACACAGAGCAG...CGAGTGAAAGCAGCAAACATAGAAGCTCGGAGCTGGGTAGATAGCTCGACTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CAA 90 bp | CTGGTTTCTTATCCTGAACAGAAATGCCCCCGGTTAACGCTGCATTaGCACCCAGGACACTGGGCCTATTTCTTCCCAGCCTTGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: LVSYPEQKCPRLTLH*HPGHWAYFFPALLS Trigger: TGAGAGCAAGGCTGGGAAGAAATAGGCCCAGTGTCCTGGGTGCAAATGCAGCGTTAACCGGGGGCATTTCTGTTCAGGATAAGAAACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACTGGAAAGTGGGAGGCTCAGCTAGCCCCAGTAGCACAAGACTATAATCCCGGTTCAAGGCCAGCTTaGCTCCAGAGTCCACAATAC | + |
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Preference number: 2 (lower is better) Translates to: TTGKWEAQLAPVAQDYNPGSRPA*LQSPQY Trigger: GTATTGTGGACTCTGGAGCCAAGCTGGCCTTGAACC...GGGATTATAGTCTTGTGCTACTGGGGCTAGCTGAGCCTCCCACTTTCCAGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAGAGGGTATGCAGAGAGGCCAGAGGCCAGCCTTGGTGAGCCATCTATTTTTCTGGGACAGGAGCTaGCACACTTTGGAGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: VREGMQRGQRPALVSHLFFWDRS*HTLEIS Trigger: AGAAATCTCCAAAGTGTGCCAGCTCCTGTCCCAGAA...AAATAGATGGCTCACCAAGGCTGGCCTCTGGCCTCTCTGCATACCCTCTCTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CAA 90 bp | GCATTTCTTTGGGCTTGTATGGGGTCCACTCAGCTACTTTGTCCTTaGCAGACCTCAGGATGTTTTGGCTTCTCTGCAGGCTGGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: AFLWACMGSTQLLCP*QTSGCFGFSAGWPL Trigger: AAGAGGCCAGCCTGCAGAGAAGCCAAAACATCCTGAGGTCTGCAAAGGACAAAGTAGCTGAGTGGACCCCATACAAGCCCAAAGAAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CAA 90 bp | TGGGGTCCACTCAGCTACTTTGTCCTTTGCAGACCTCAGGATGTTTaGGCTTCTCTGCAGGCTGGCCTCTTTCAATACGTCAGCTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: WGPLSYFVLCRPQDV*ASLQAGLFQYVSSN Trigger: ATTAGAGCTGACGTATTGAAAGAGGCCAGCCTGCAGAGAAGCCAAAACATCCTGAGGTCTGCAAAGGACAAAGTAGCTGAGTGGACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CAA 90 bp | TTGGTGTGCATTTCTTTGGGCTTGTATGGGGTCCACTCAGCTACTTaGTCCTTTGCAGACCTCAGGATGTTTTGGCTTCTCTGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LVCISLGLYGVHSAT*SFADLRMFWLLCRL Trigger: CAGCCTGCAGAGAAGCCAAAACATCCTGAGGTCTGCAAAGGACAAAGTAGCTGAGTGGACCCCATACAAGCCCAAAGAAATGCACACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTTCATTCTCAAACTGTTCTAGCATGGAGGTCAAGGGAAAACCATCAGTGCGAGCCCTAGAGATGTaGCTGTCTCTGCTCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AGSFSNCSSMEVKGKPSVRALEM*LSLLFQ Trigger: CTGGAAGAGCAGAGACAGCCACATCTCTAGGGCTCG...CACTGATGGTTTTCCCTTGACCTCCATGCTAGAACAGTTTGAGAATGAACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGCACACTGAGACAGAGTGTTGCTGCCAGGTCCTTCCCAAGCTTTTTGACAAAAGAATCACCTATGTaGGAAGCCCTTCCCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: NGTLRQSVAARSFPSFLTKESPM*EALPST Trigger: AGTGCTGGGAAGGGCTTCTCACATAGGTGATTCTTT...TGTCAAAAAGCTTGGGAAGGACCTGGCAGCAACACTCTGTCTCAGTGTGCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGTTTCAGCTGGTTCATTCTCAAACTGTTCTAGCATGGAGGTCAAGGGAAACAGACTCTATGAGCTaGGGCTGCTCTGTGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VLFQLVHSQTVLAWRSRETDSMS*GCSVWS Trigger: AGACCACACAGAGCAGCCTCAGCTCATAGAGTCTGT...TTCCCTTGACCTCCATGCTAGAACAGTTTGAGAATGAACCAGCTGAAACAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAGTCGAGCTATCTACCCAGCTCCGAGCTTCTATGTTTGCTGCTTTCACTCGCAAGACAATCCTGAATaGAAGGCCACTCTGGACTAC | + |
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Preference number: 2 (lower is better) Translates to: TSRAIYPAPSFYVCCFHSQDNPE*KATLDY Trigger: GTAGTCCAGAGTGGCCTTGCATTCAGGATTGTCTTG...CGAGTGAAAGCAGCAAACATAGAAGCTCGGAGCTGGGTAGATAGCTCGACTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTAAATCCAGGCTCTCTTCCAGGCCCCAATTGGCATGGTGGAAACAAGTCTATTTCTTCCCAGCCTTaGTCTCAGCTCACAGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: CVNPGSLPGPNWHGGNKSISSQP*SQLTVH Trigger: ATGGACTGTGAGCTGAGAGCAAGGCTGGGAAGAAAT...AGACTTGTTTCCACCATGCCAATTGGGGCCTGGAAGAGAGCCTGGATTTACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCACTCTGGACTACAGAATAGGCTTAAGTCTCAAAAGACAAAGAAACCCAATCACCACTTGCACATaGCAGGATCCCCTGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KATLDYRIGLSLKRQRNPITTCT*QDPLVP Trigger: AGGGACCAGGGGATCCTGGCATGTGCAAGTGGTGAT...TGGGTTTCTTTGTCTTTTGAGACTTAAGCCTATTCTGTAGTCCAGAGTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTTCATTCTCAAACTGTTCTAGCATGGAGGTCAAGGGAAAACCATCAGTGAAGCTGTTGCTTATGTaGGAGAGGGTATGCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AGSFSNCSSMEVKGKPSVKLLLM*ERVCRE Trigger: CTCTCTGCATACCCTCTCTCACATAAGCAACAGCTT...CACTGATGGTTTTCCCTTGACCTCCATGCTAGAACAGTTTGAGAATGAACCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CAA 90 bp | GAACAGGCTATGTGTACTGTGTGTAAGCATTCAAGCACACCCTCTTaGCTGTTTCCAGTGCATGGCTATTTTAGTTACACGCCTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: EQAMCTVCKHSSTPS*LFPVHGYFSYTPKL Trigger: CAGCTTAGGCGTGTAACTAAAATAGCCATGCACTGGAAACAGCAAAGAGGGTGTGCTTGAATGCTTACACACAGTACACATAGCCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CAA 90 bp | CCCAAGCTTTTTGACACGCATATGGTGGCAAAGTGGTTAGAGGATTaGTCTTATGCATGTGTATGTGTAAATCCAGGCTCTCTTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PKLFDTHMVAKWLED*SYACVCVNPGSLPG Trigger: GCCTGGAAGAGAGCCTGGATTTACACATACACATGCATAAGACAAATCCTCTAACCACTTTGCCACCATATGCGTGTCAAAAAGCTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCACTCTGGACTACAGAATAGGCTTAAGTCTCAAAAGACAAAGAAACCCACCTTCCCAGCACTGTTaGAAATCAAGGTCAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: KATLDYRIGLSLKRQRNPPSQHC*KSRSEP Trigger: TGGTTCTGACCTTGATTTTCAACAGTGCTGGGAAGG...TGGGTTTCTTTGTCTTTTGAGACTTAAGCCTATTCTGTAGTCCAGAGTGGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTAATGTTAGGATTCAAACGGGCTCCAGGATCTCTTAGCTTTTTGGTTTTCTCTGGTTTCTTATCCTaGACAGAAATGCCCCCGGTT | + |
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Preference number: 2 (lower is better) Translates to: ALMLGFKRAPGSLSFLVFSGFLS*TEMPPV Trigger: AACCGGGGGCATTTCTGTTCAGGATAAGAAACCAGA...GAAAACCAAAAAGCTAAGAGATCCTGGAGCCCGTTTGAATCCTAACATTAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR GCA 90 bp | ACTACCAATGGCTGTTTGAAAACCTTTGACAGACAATCCCAACATGTCACATCAGGCCCTACTGAAGACTaGCATCTCCCCAAACTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TTNGCLKTFDRQSQHVTSGPTED*HLPKLS Trigger: TGAAAGTTTGGGGAGATGGCAGTCTTCAGTAGGGCC...TGATGTGACATGTTGGGATTGTCTGTCAAAGGTTTTCAAACAGCCATTGGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CAA 90 bp | TTAAAAATAAAGAATCACCTATGTGAGAAGCCCTTCCCAGCACTGTaGAAAATCAAGGTCAGAACCAAGAAGGTCCAGACTCCTGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: LKIKNHLCEKPFPAL*KIKVRTKKVQTPVR Trigger: GCGAACAGGAGTCTGGACCTTCTTGGTTCTGACCTTGATTTTCAACAGTGCTGGGAAGGGCTTCTCACATAGGTGATTCTTTATTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR TCA 90 bp | ACTACCAATGGCTGTTTGAAAACCTTTGACAGACAATCCCAACATGTCACATCACCATCTATTTTTCCTTaGGACAGGATCTCTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: TTNGCLKTFDRQSQHVTSPSIFP*DRISLL Trigger: GAGAAGAGAGATCCTGTCTCAAGGAAAAATAGATGG...TGATGTGACATGTTGGGATTGTCTGTCAAAGGTTTTCAAACAGCCATTGGTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTAAAAACTTGTCTGTGTCTTACTTTGCCCTCATTGTTAATGGTTCTGGGGTGATCTGCACTTTGTaGTTGGGTGTTGGAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: IFKNLSVSYFALIVNGSGVICTL*LGVGNS Trigger: ACTGTTTCCAACACCCAACCACAAAGTGCAGATCAC...CCCAGAACCATTAACAATGAGGGCAAAGTAAGACACAGACAAGTTTTTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTAAAAACTTGTCTGTGTCTTACTTTGCCCTCATTGTTAATGGTTCTGGGGACTATGCAGTGCTTTaGTGTGCATTTCTTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: IFKNLSVSYFALIVNGSGDYAVL*CAFLWA Trigger: AGCCCAAAGAAATGCACACCAAAGCACTGCATAGTC...CCCAGAACCATTAACAATGAGGGCAAAGTAAGACACAGACAAGTTTTTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTAAGTCTCAAAAGACAAAGAAACCCAAAACTCCATTACACGATGATGATTCTACCCTCTATATTTTaGTTACTTCTTACAAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: GLSLKRQRNPKLHYTMMILPSIF*LLLTSR Trigger: TCGGCTTGTAAGAAGTAAGCAAAATATAGAGGGTAG...AATCATCATCGTGTAATGGAGTTTTGGGTTTCTTTGTCTTTTGAGACTTAAGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 72 bp | CAAGCAGAAAGCAGACCAAGCGCAGCAGTGCGCCCCTaGGCTACAGACCTACCCTCCACGGAGGTCGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: QAESRPSAAVRP*ATDLPSTEVVH Trigger: GTGGACGACCTCCGTGGAGGGTAGGTCTGTAGCTCAGGGGCGCACTGCTGCGCTTGGTCTGCTTTCTGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CCA 72 bp | CTACAGACCTACCCTCCACGGAGGTCGTCCACACAGTaGGGGGCTATAGCAGTGTCCACAGGAGAACCCACG | + |
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Preference number: 3 (lower is better) Translates to: LQTYPPRRSSTQ*GAIAVSTGEPT Trigger: CGTGGGTTCTCCTGTGGACACTGCTATAGCCCCCCACTGTGTGGACGACCTCCGTGGAGGGTAGGTCTGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR CCA 72 bp | AGGTCCAGTGAGCCAGAGAAGCTCAAGTCCCACAACTaGAAAGTGGGAGGCTCAGCTAGCCCCAGTAGCACA | + |
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Preference number: 3 (lower is better) Translates to: RSSEPEKLKSHN*KVGGSASPSST Trigger: TGTGCTACTGGGGCTAGCTGAGCCTCCCACTTTCCAGTTGTGGGACTTGAGCTTCTCTGGCTCACTGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 72 bp | CACAGACTCTATGAGCTGAGGCTGCTCTGTGTGGTCTaGGCAGAGCACAGTGAGGTGGAGCTCTTGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: HRLYELRLLCVV*AEHSEVELLLR Trigger: TCTCAGCAAGAGCTCCACCTCACTGTGCTCTGCTCAGACCACACAGAGCAGCCTCAGCTCATAGAGTCTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| 3UTR TCA 72 bp | CGCACAGTTCCATGCCTAGCAAAGCTGTTGCTTATGTaGGAGAGGGTATGCAGAGAGGCCAGAGGCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTVPCLAKLLLM*ERVCREARGQP Trigger: AGGCTGGCCTCTGGCCTCTCTGCATACCCTCTCTCACATAAGCAACAGCTTTGCTAGGCATGGAACTGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CCA 72 bp | TTTTTCCTTGAGACAGGATCTCTCTTCTCACCAGTCTaGGAACTCTCCGAGCAGGCAAGGCTGGCGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: FFLETGSLFSPV*ELSEQARLAGQ Trigger: CTGTCCCGCCAGCCTTGCCTGCTCGGAGAGTTCCCAGACTGGTGAGAAGAGAGATCCTGTCTCAAGGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CCA 72 bp | GTGAGCCAGAGAAGCTCAAGTCCCACAACTGGAAAGTaGGAGGCTCAGCTAGCCCCAGTAGCACAAGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: VSQRSSSPTTGK*EAQLAPVAQDY Trigger: ATAGTCTTGTGCTACTGGGGCTAGCTGAGCCTCCCACTTTCCAGTTGTGGGACTTGAGCTTCTCTGGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGAGAGGGTATGCAGAGAGGCCAGAGGCCAGCCTTGGTGAGCCATCTATTTTATTTCTTCCCAGCCTaGCTCTCAGCTCACAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VREGMQRGQRPALVSHLFYFFPA*LSAHSP Trigger: TGGACTGTGAGCTGAGAGCAAGGCTGGGAAGAAATA...AAATAGATGGCTCACCAAGGCTGGCCTCTGGCCTCTCTGCATACCCTCTCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR GCA 72 bp | TCCCCATGGTTCCAATGGCACACTGAGACAGAGTGTTaGTGCCAGGTCCTTCCCAAGCTTTTTGACACGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SPWFQWHTETEC*CQVLPKLFDTH Trigger: ATGCGTGTCAAAAAGCTTGGGAAGGACCTGGCAGCAACACTCTGTCTCAGTGTGCCATTGGAACCATGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CCA 72 bp | AGTGATGGATGGGAGGTTACATCCCCATGGTTCCAATaGCACACTGAGACAGAGTGTTGCTGCCAGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SDGWEVTSPWFQ*HTETECCCQVL Trigger: AAGGACCTGGCAGCAACACTCTGTCTCAGTGTGCCATTGGAACCATGGGGATGTAACCTCCCATCCATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CCA 72 bp | GTGTGCCACTTGCTTCTGAAGTGTGCCGCTTGCTTCTaGGCTCCGCCATTTCTGATTGGAAACAATGTACCC | + |
|
Preference number: 3 (lower is better) Translates to: VCHLLLKCAACF*APPFLIGNNVP Trigger: GGGTACATTGTTTCCAATCAGAAATGGCGGAGCCCAGAAGCAAGCGGCACACTTCAGAAGCAAGTGGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCACACTGAGACAGAGTGTTGCTGCCAGGTCCTTCCCAAGCTTTTTGACAAGTGAGGTGGAGCTCTaGCTGAGAAACCCCTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NGTLRQSVAARSFPSFLTSEVEL*LRNPLE Trigger: CTCTAAGGGGTTTCTCAGCAAGAGCTCCACCTCACT...TGTCAAAAAGCTTGGGAAGGACCTGGCAGCAACACTCTGTCTCAGTGTGCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | GAGTCCACAATACCAGTTAACACAGACTCTATGAGCTaGGGCTGCTCTGTGTGGTCTGAGCAGAGCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ESTIPVNTDSMS*GCSVWSEQSTV Trigger: CACTGTGCTCTGCTCAGACCACACAGAGCAGCCTCAGCTCATAGAGTCTGTGTTAACTGGTATTGTGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | TTTTTCCAGTTCTCCATGAAGTGTGCCACTTGCTTCTaGAGTGTGCCGCTTGCTTCTGGGCTCCGCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: FFQFSMKCATCF*SVPLASGLRHF Trigger: GAAATGGCGGAGCCCAGAAGCAAGCGGCACACTTCAGAAGCAAGTGGCACACTTCATGGAGAACTGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR GCA 72 bp | AAACGGGCTCCAGGATCTCTTAGCTTTTTGGTTTTCTaGTCACCCTGGCAGCTCTTACTCCATCACCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KRAPGSLSFLVF*SPWQLLLHHPA Trigger: AGCTGGGTGATGGAGTAAGAGCTGCCAGGGTGAGCAGAAAACCAAAAAGCTAAGAGATCCTGGAGCCCGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CCA 72 bp | AAATCCAGGCTCTCTTCCAGGCCCCAATTGGCATGGTaGAAACAAGTCTACCACGTTTCTCTATGGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSRLSSRPQLAW*KQVYHVSLWPA Trigger: TGCAGGCCATAGAGAAACGTGGTAGACTTGTTTCCACCATGCCAATTGGGGCCTGGAAGAGAGCCTGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | CGAGCTTCTATGTTTGCTGCTTTCACTCGTGGGAACTaGGGTAAGCAAACAGGAGCCATGCTAGTCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RASMFAAFTRGN*GKQTGAMLVLP Trigger: AGGAAGGACTAGCATGGCTCCTGTTTGCTTACCTCAGTTCCCACGAGTGAAAGCAGCAAACATAGAAGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | ACTGTTCTAGCATGGAGGTCAAGGGAAAACCATCAGTaGTGGATGGGAGGTTACATCCCCATGGTTCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: TVLAWRSRENHQ*WMGGYIPMVPM Trigger: CATTGGAACCATGGGGATGTAACCTCCCATCCATCACTGATGGTTTTCCCTTGACCTCCATGCTAGAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR GCA 72 bp | TTGTCCTTTGCAGACCTCAGGATGTTTTGGCTTCTCTaGAGGCTGGCCTCTTTCAATACGTCAGCTCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSFADLRMFWLL*RLASFNTSALM Trigger: CATTAGAGCTGACGTATTGAAAGAGGCCAGCCTGCAGAGAAGCCAAAACATCCTGAGGTCTGCAAAGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCACACTGAGACAGAGTGTTGCTGCCAGGTCCTTCCCAAGCTTTTTGACAGTTGTGGGGTTTCTGTaGGTCATTTTTGAGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NGTLRQSVAARSFPSFLTVVGFL*VIFEKA Trigger: AGCCTTCTCAAAAATGACCAACAGAAACCCCACAAC...TGTCAAAAAGCTTGGGAAGGACCTGGCAGCAACACTCTGTCTCAGTGTGCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | ATGCTAGTCCTTCCTAAGGACTCTGGTTTCTTATCCTaGACAGAAATGCCCCCGGTTAACGCTGCATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: MLVLPKDSGFLS*TEMPPVNAAFA Trigger: TGCAAATGCAGCGTTAACCGGGGGCATTTCTGTTCAGGATAAGAAACCAGAGTCCTTAGGAAGGACTAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | CTAGCTCACCACTACCAATGGCTGTTTGAAAACCTTTaGCAGACAATCCCAACATGTCACATCACCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LAHHYQWLFENL*QTIPTCHITLA Trigger: TGCCAGGGTGATGTGACATGTTGGGATTGTCTGTCAAAGGTTTTCAAACAGCCATTGGTAGTGGTGAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | ATTGTTAATGGTTCTGGGGGTTTTTCCAGTTCTCCATaGAGTGTGCCACTTGCTTCTGAAGTGTGCCGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IVNGSGGFSSSP*SVPLASEVCRL Trigger: CAAGCGGCACACTTCAGAAGCAAGTGGCACACTTCATGGAGAACTGGAAAAACCCCCAGAACCATTAACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTGTTTCAGCTGGTTCATTCTCAAACTGTTCTAGCATGGAGGTCAAGGGAAAGGAGCTGGCACACTTaGGAGATTTCTGTTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLFQLVHSQTVLAWRSRERSWHT*EISVIF Trigger: AAAAATAACAGAAATCTCCAAAGTGTGCCAGCTCCT...TTCCCTTGACCTCCATGCTAGAACAGTTTGAGAATGAACCAGCTGAAACAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTAATGTTAGGATTCAAACGGGCTCCAGGATCTCTTAGCTTTTTGGTTTTCCCTACCCTCTATATTTaGCTTACTTCTTACAAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: ALMLGFKRAPGSLSFLVFPTLYI*LTSYKP Trigger: CGGCTTGTAAGAAGTAAGCAAAATATAGAGGGTAGG...GAAAACCAAAAAGCTAAGAGATCCTGGAGCCCGTTTGAATCCTAACATTAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTTAAAAACTTGTCTGTGTCTTACTTTGCCCTCATTGTTAATGGTTCTGGGTCTTCCAGGCCCCAATaGGCATGGTGGAAACAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IFKNLSVSYFALIVNGSGSSRPQ*AWWKQV Trigger: GACTTGTTTCCACCATGCCAATTGGGGCCTGGAAGA...CCCAGAACCATTAACAATGAGGGCAAAGTAAGACACAGACAAGTTTTTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CCA 72 bp | CTTCCCAAGCTTTTTGACACGCATATGGTGGCAAAGTaGTTAGAGGATTTGTCTTATGCATGTGTATGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LPKLFDTHMVAK*LEDLSYACVCV Trigger: TACACATACACATGCATAAGACAAATCCTCTAACCACTTTGCCACCATATGCGTGTCAAAAAGCTTGGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | CAAGAGTTGTATTGTTTGTTAAAGGGCCCAAATCACTaGTTAAACAAAAAGGAATCCCCTGCCTCATATGAT | + |
|
Preference number: 3 (lower is better) Translates to: QELYCLLKGPNH*LNKKESPASYD Trigger: ATCATATGAGGCAGGGGATTCCTTTTTGTTTAATCAGTGATTTGGGCCCTTTAACAAACAATACAACTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR TCA 72 bp | CCAAGCTGTGTCCTAAGCTTATCACATGTTTACTCATaGAATCTTCAAATTCACGTTTTTGATTTTCCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSCVLSLSHVYS*NLQIHVFDFPY Trigger: ATAGGGAAAATCAAAAACGTGAATTTGAAGATTTCATGAGTAAACATGTGATAAGCTTAGGACACAGCTTGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | TATCCTGAACAGAAATGCCCCCGGTTAACGCTGCATTaGCACCCAGGACACTGGGCCTATTTCTTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YPEQKCPRLTLH*HPGHWAYFFPA Trigger: GGCTGGGAAGAAATAGGCCCAGTGTCCTGGGTGCAAATGCAGCGTTAACCGGGGGCATTTCTGTTCAGGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | GTGAGAGAGGGTATGCAGAGAGGCCAGAGGCCAGCCTaGGTGAGCCATCTATTTTTCCTTGAGACAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VREGMQRGQRPA*VSHLFFLETGS Trigger: AGATCCTGTCTCAAGGAAAAATAGATGGCTCACCAAGGCTGGCCTCTGGCCTCTCTGCATACCCTCTCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | TGGGCTTGTATGGGGTCCACTCAGCTACTTTGTCCTTaGCAGACCTCAGGATGTTTTGGCTTCTCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WACMGSTQLLCP*QTSGCFGFSAG Trigger: GCCTGCAGAGAAGCCAAAACATCCTGAGGTCTGCAAAGGACAAAGTAGCTGAGTGGACCCCATACAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGAGAGGGTATGCAGAGAGGCCAGAGGCCAGCCTTGGTGAGCCATCTATTTTCGTCGCCAGGACTTTaGAAAATGGTAGCTATACCT | + |
|
Preference number: 4 (lower is better) Translates to: VREGMQRGQRPALVSHLFSSPGL*KMVAIP Trigger: AGGTATAGCTACCATTTTTCAAAGTCCTGGCGACGA...AAATAGATGGCTCACCAAGGCTGGCCTCTGGCCTCTCTGCATACCCTCTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGAAGCAACTAAGGTCCAGTGAGCCAGAGAAGCTCAAGTCCCACAACTGGTCACTCATTTTGCCTTaGAAATTGCCGAAGTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVKQLRSSEPEKLKSHNWSLILP*KLPKSS Trigger: GCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGA...CCAGTTGTGGGACTTGAGCTTCTCTGGCTCACTGGACCTTAGTTGCTTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | CTATGTTATCACTGGCATCCAGCAGGATCCCAGAGCTaGCTGTGGCCATTTCCTCAGTCACTATGGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCYHWHPAGSQS*LWPFPQSLWKV Trigger: CACTTTCCATAGTGACTGAGGAAATGGCCACAGCAAGCTCTGGGATCCTGCTGGATGCCAGTGATAACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | GAAAGCAGTCGCCCCTCAAAGGACAGTGTACCATCTTaGTACTTCTCAAAGCCTTACCACCTACCCTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: ESSRPSKDSVPS*YFSKPYHLPSI Trigger: TATAGAGGGTAGGTGGTAAGGCTTTGAGAAGTACAAAGATGGTACACTGTCCTTTGAGGGGCGACTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | TTAGGATTCAAACGGGCTCCAGGATCTCTTAGCTTTTaGGTTTTCTGCTCACCCTGGCAGCTCTTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGFKRAPGSLSF*VFCSPWQLLLH Trigger: ATGGAGTAAGAGCTGCCAGGGTGAGCAGAAAACCAAAAAGCTAAGAGATCCTGGAGCCCGTTTGAATCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | ATTTCTTTGGGCTTGTATGGGGTCCACTCAGCTACTTaGTCCTTTGCAGACCTCAGGATGTTTTGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLGLYGVHSAT*SFADLRMFWLL Trigger: GAGAAGCCAAAACATCCTGAGGTCTGCAAAGGACAAAGTAGCTGAGTGGACCCCATACAAGCCCAAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTAAATCCAGGCTCTCTTCCAGGCCCCAATTGGCATGGTGGAAACAAGTCTCTTTTAACTCCTTCTTaGTCATCCAGGGAACTTATA | + |
|
Preference number: 4 (lower is better) Translates to: CVNPGSLPGPNWHGGNKSLLTPS*SSRELI Trigger: TATAAGTTCCCTGGATGAGCAAGAAGGAGTTAAAAG...AGACTTGTTTCCACCATGCCAATTGGGGCCTGGAAGAGAGCCTGGATTTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTTAAAAACTTGTCTGTGTCTTACTTTGCCCTCATTGTTAATGGTTCTGGGCGGTCAGGAGATTGCTaGCGTAGGCGAAGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFKNLSVSYFALIVNGSGRSGDC*RRRSTG Trigger: TCCTGTACTTCGCCTACGGCAGCAATCTCCTGACCG...CCCAGAACCATTAACAATGAGGGCAAAGTAAGACACAGACAAGTTTTTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | ATGTGTACTGTGTGTAAGCATTCAAGCACACCCTCTTaGCTGTTTCCAGTGCATGGCTATTTTAGTTACACG | + |
|
Preference number: 4 (lower is better) Translates to: MCTVCKHSSTPS*LFPVHGYFSYT Trigger: CGTGTAACTAAAATAGCCATGCACTGGAAACAGCAAAGAGGGTGTGCTTGAATGCTTACACACAGTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | ATAAGACACTTTGGCTTGGTGATCTGCACTTTGTGGTaGGGTGTTGGAAACAGTCACAACTATAGTGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IRHFGLVICTLW*GVGNSHNYSGL Trigger: TAGACCACTATAGTTGTGACTGTTTCCAACACCCAACCACAAAGTGCAGATCACCAAGCCAAAGTGTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | TTTGACACGCATATGGTGGCAAAGTGGTTAGAGGATTaGTCTTATGCATGTGTATGTGTAAATCCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FDTHMVAKWLED*SYACVCVNPGS Trigger: AGAGCCTGGATTTACACATACACATGCATAAGACAAATCCTCTAACCACTTTGCCACCATATGCGTGTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| 3UTR CAA 72 bp | CCACACACTGAATTGTTAGATTTCAGCCATGGTGTTTaGATACTAACATCATCATTCAGGTCCTGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHTELLDFSHGV*ILTSSFRSCPL Trigger: CAGAGGACAGGACCTGAATGATGATGTTAGTATCAAAACACCATGGCTGAAATCTAACAATTCAGTGTGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS-3UTR TCA 90 bp | ACTACCAATGGCTGTTTGAAAACCTTTGACAGACAATCCCAACATGTCACATCAGCTTTTAATTTCTCTTaGTATTCCTGTGGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: TTNGCLKTFDRQSQHVTSAFNFS*YSCGKP Trigger: CGGTTTGCCACAGGAATATCAAGAGAAATTAAAAGC...TGATGTGACATGTTGGGATTGTCTGTCAAAGGTTTTCAAACAGCCATTGGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS CCA 90 bp | TTTAACTCCTTCTTGCCTCCGTGCCACCTCTCACTCATTTTGCCTTaGAAATTGCCGAAGTCGAGCTTAAAGTCCTGCAGGCGCGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FNSFLPPCHLSLILP*KLPKSSLKSCRRAT Trigger: CGTGGCGCGCCTGCAGGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGGCAAGAAGGAGTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204301.3 |
||
| CDS-3UTR CAA 90 bp | GTGAGAGAGGGTATGCAGAGAGGCCAGAGGCCAGCCTTGGTGAGCCATCTATTTACTTTTAACTCCTTCTaGCTCATCCAGGGAACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VREGMQRGQRPALVSHLFTFNSF*LIQGTY Trigger: ATAAGTTCCCTGGATGAGCAAGAAGGAGTTAAAAGT...AAATAGATGGCTCACCAAGGCTGGCCTCTGGCCTCTCTGCATACCCTCTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGTTCATTCTCAAACTGTTCTAGCATGGAGGTCAAGGGAAAACCATCAGTGATTTTGCCTTGGAAATaGCCGAAGTCGAGCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGSFSNCSSMEVKGKPSVILPWK*PKSSLK Trigger: CTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAAT...CACTGATGGTTTTCCCTTGACCTCCATGCTAGAACAGTTTGAGAATGAACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCCACTCTGGACTACAGAATAGGCTTAAGTCTCAAAAGACAAAGAAACCCATTCGTCGCCAGGACTTaGAAAAATGGTAGCTATACC | + |
|
Preference number: 5 (lower is better) Translates to: KATLDYRIGLSLKRQRNPFVART*KNGSYT Trigger: GGTATAGCTACCATTTTTCAAAGTCCTGGCGACGAA...TGGGTTTCTTTGTCTTTTGAGACTTAAGCCTATTCTGTAGTCCAGAGTGGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS CAA 72 bp | CCTCCGTGCCACCTCTCACTCATTTTGCCTTGGAAATaGCCGAAGTCGAGCTTAAAGTCCTGCAGGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPCHLSLILPWK*PKSSLKSCRRA Trigger: GGCGCGCCTGCAGGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131475.2 ENSMUST00000203208.2 ENSMUST00000204301.3 |
||
| CDS CAA 90 bp | GTAGCTATACCTCCGTGCCACCTCTCACTCATTTTGCCTTGGAAATaGCCGAAGTCGAGCTTAAAGTCCTGCAGGCGCGCCACGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VAIPPCHLSLILPWK*PKSSLKSCRRATQQ Trigger: CTGCTGCGTGGCGCGCCTGCAGGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGGTATAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS CAA 90 bp | CTTTTAACTCCTCCGTGCCACCTCTCACTCATTTTGCCTTGGAAATaGCCGAAGTCGAGCTTAAAGTCCTGCAGGCGCGCCACGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLTPPCHLSLILPWK*PKSSLKSCRRATQQ Trigger: CTGCTGCGTGGCGCGCCTGCAGGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGGAGTTAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203208.2 |
||
| CDS TCA 72 bp | CTCCATACCACTCCCCACACTTCGTCGCCAGGACTTTaGAAAATGGTAGCTATACCTCCGTGCCACCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LHTTPHTSSPGL*KMVAIPPCHLS Trigger: TGAGAGGTGGCACGGAGGTATAGCTACCATTTTTCAAAGTCCTGGCGACGAAGTGTGGGGAGTGGTATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
||
| CDS CAA 72 bp | TCTCCATACCACTCCCCACACTTCGTCGCCAGGACTTaGAAAAATGGTAGCTATACCTCCGTGCCACCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPYHSPHFVART*KNGSYTSVPPL Trigger: GAGAGGTGGCACGGAGGTATAGCTACCATTTTTCAAAGTCCTGGCGACGAAGTGTGGGGAGTGGTATGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| CDS CAA 90 bp | TCCACTTTTAACTCCTTCTTGCCTCCGTGCCACCTCTCACTCATTTaGCCTTGGAAATTGCCGAAGTCGAGCTTAAAGTCCTGCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: STFNSFLPPCHLSLI*PWKLPKSSLKSCRR Trigger: GCGCCTGCAGGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGGCAAGAAGGAGTTAAAAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204301.3 |
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| CDS CAA 72 bp | CTTCTTGCCTCCGTGCCACCTCTCACTCATTTTGCCTaGGAAATTGCCGAAGTCGAGCTTAAAGTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLASVPPLTHFA*EIAEVELKVLQ Trigger: CTGCAGGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGGCAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204301.3 |
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| CDS CAA 72 bp | AACTCCTTCTTGCCTCCGTGCCACCTCTCACTCATTTaGCCTTGGAAATTGCCGAAGTCGAGCTTAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: NSFLPPCHLSLI*PWKLPKSSLKS Trigger: GGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGGCAAGAAGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204301.3 |
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| CDS CAA 72 bp | ATGGTAGCTATACCTCCGTGCCACCTCTCACTCATTTaGCCTTGGAAATTGCCGAAGTCGAGCTTAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: MVAIPPCHLSLI*PWKLPKSSLKS Trigger: GGACTTTAAGCTCGACTTCGGCAATTTCCAAGGCAAAATGAGTGAGAGGTGGCACGGAGGTATAGCTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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| CDS CAA 90 bp | TTTGTTCATTCTCCATACCACTCCCCACACTTCGTCGCCAGGACTTaGAAAAATGGTAGCTATACCTCCGTGCCACCTCTCACTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: FVHSPYHSPHFVART*KNGSYTSVPPLTHF Trigger: AAAATGAGTGAGAGGTGGCACGGAGGTATAGCTACCATTTTTCAAAGTCCTGGCGACGAAGTGTGGGGAGTGGTATGGAGAATGAACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131475.2 |
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