Pregenerated sensors for GGACT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041625Ensembl transcript IDs: ENSMUST00000038075.12, ENSMUST00000110679.9, ENSMUST00000160401.8, ENSMUST00000161322.3, ENSMUST00000162164.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGATATCTCCTTTTGCCCTTTAGTGAGGATTTTCTATCTTTCTGGTaGCCTCTGTTGTTTCCTCACCCTCTGCCATTGTCCTTGATGGCC | + |
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Preference number: 1 (lower is better) Translates to: RYLLLPFSEDFLSFW*PLLFPHPLPLSLMA Trigger: GGCCATCAAGGACAATGGCAGAGGGTGAGGAAACAACAGAGGTCACCAGAAAGATAGAAAATCCTCACTAAAGGGCAAAAGGAGATATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR GCA 90 bp | GACTCCAGGCGGACAGATACTGATGATGTGGTCGATATCTCCTTTTaGCCTTTAGTGAGGATTTTCTATCTTTCTGGTGACCTCTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: DSRRTDTDDVVDISF*PLVRIFYLSGDLCC Trigger: ACAACAGAGGTCACCAGAAAGATAGAAAATCCTCACTAAAGGGCAAAAGGAGATATCGACCACATCATCAGTATCTGTCCGCCTGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR TCA 90 bp | TGTTTCAGATCCCAAGGAAAAATTAAATGTAATCCCTTCTTCAGATaGATGAATGAGTCTGTTGTGGTCCCAACAACCAGTCCTAAACAC | + |
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Preference number: 1 (lower is better) Translates to: CFRSQGKIKCNPFFR*MNESVVVPTTSPKH Trigger: GTGTTTAGGACTGGTTGTTGGGACCACAACAGACTCATTCATTCATCTGAAGAAGGGATTACATTTAATTTTTCCTTGGGATCTGAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR GCA 90 bp | AAGTCACATCAGATTAGAGTATATGACAAAAATGTTTTGTCAGCATaGTTTAGAGTTGAACTTGGAACGCTCTGCTTATGCCAGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: KSHQIRVYDKNVLSA*FRVELGTLCLCQEA Trigger: AGCTTCCTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAAAACATTTTTGTCATATACTCTAATCTGATGTGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAGTGAGGAGAACCAGGGACCTCAGTCTAGAGTGTTTCCTATCTAGTACCTTCCCTCCATCCTGTTaGCGTCTGGGGCACAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: KAVRRTRDLSLECFLSSTFPPSC*RLGHSP Trigger: AGGGCTGTGCCCCAGACGCCAACAGGATGGAGGGAA...GGTACTAGATAGGAAACACTCTAGACTGAGGTCCCTGGTTCTCCTCACTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR-3UTR TCA 90 bp | CCTAAACACAGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACCTCTGCCATTGTCCTTaGTGGCCTGGGACTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PKHRIISRITFPWCLGLYLCHCP*WPGTGR Trigger: TCTTCCAGTCCCAGGCCATCAAGGACAATGGCAGAG...GTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCTGTGTTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR CAA 90 bp | AGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTaGACTCCAGGCGGACAGATACTGATGATGTGGTCGATATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RIISRITFPWCLGLY*TPGGQILMMWSISP Trigger: AGGAGATATCGACCACATCATCAGTATCTGTCCGCCTGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR-3UTR GCA 90 bp | AATGGCCATTTTAATAGTTTGTGTGTGATTTGGAAATTGCAAGTGGGGTTGGGGACCTGCAAGTCCAGGTaGTCCTTAAGACTAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: NGHFNSLCVIWKLQVGLGTCKSR*SLRLKQ Trigger: CTGCTTTAGTCTTAAGGAGCACCTGGACTTGCAGGT...CCCCAACCCCACTTGCAATTTCCAAATCACACACAAACTATTAAAATGGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR CAA 90 bp | GAGTATATGACAAAAATGTTTTGTCAGCATGCTTTAGAGTTGAACTaGGAACGCTCTGCTTATGCCAGGAAGCTATCTGGTTCCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: EYMTKMFCQHALELN*ERSAYARKLSGSLH Trigger: ATGGAGGGAACCAGATAGCTTCCTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAAAACATTTTTGTCATATACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR-3UTR TCA 90 bp | CCTAAACACAGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTGGGACTGGAAGAGCTaGAGAAGAATCCATAATGCT | + |
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Preference number: 2 (lower is better) Translates to: PKHRIISRITFPWCLGLYWDWKS*RRIHNA Trigger: AGCATTATGGATTCTTCTTCAGCTCTTCCAGTCCCA...GTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCTGTGTTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR-3UTR GCA 90 bp | GTACAACATGCTTTCCTTGATGTTTTTACACTGATCCAACCCAATTCAGTATTTGGAACGCTCTGCTTATaGCAGGAAGCTATCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: VQHAFLDVFTLIQPNSVFGTLCL*QEAIWF Trigger: GAACCAGATAGCTTCCTGGCATAAGCAGAGCGTTCC...AAATACTGAATTGGGTTGGATCAGTGTAAAAACATCAAGGAAAGCATGTTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR-3UTR GCA 90 bp | ACTGATCCAACCCAATTCAGTATTTCCTGCCATTTCTTTCTAGATTCGACTTCTTTCCTATCTAGTACCTaGAAGTCCAGGTGCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: TDPTQFSISCHFFLDSTSFLSST*KSRCSL Trigger: TAAGGAGCACCTGGACTTGCAGGTACTAGATAGGAA...AGAAGTCGAATCTAGAAAGAAATGGCAGGAAATACTGAATTGGGTTGGATCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR CAA 90 bp | AGATTAGAGTATATGACAAAAATGTTTTGTCAGCATGCTTTAGAGTaGAACTTGGAACGCTCTGCTTATGCCAGGAAGCTATCTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RLEYMTKMFCQHALE*NLERSAYARKLSGS Trigger: GGAACCAGATAGCTTCCTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAAAACATTTTTGTCATATACTCTAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGATGCAACTGCAGCCTAGTCTTTTTAGTCTCAGAAGATGCCATCTTCAGAATGTTTTGTCAGCATaGTTTAGAGTTGAACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: SEMQLQPSLFSLRRCHLQNVLSA*FRVELG Trigger: TCCAAGTTCAACTCTAAAGCATGCTGACAAAACATT...CTGAAGATGGCATCTTCTGAGACTAAAAAGACTAGGCTGCAGTTGCATCTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR CAA 90 bp | AGCAGTATTAAGTCACATCAGATTAGAGTATATGACAAAAATGTTTaGTCAGCATGCTTTAGAGTTGAACTTGGAACGCTCTGCTTATGC | + |
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Preference number: 2 (lower is better) Translates to: SSIKSHQIRVYDKNV*SACFRVELGTLCLC Trigger: GCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAAAACATTTTTGTCATATACTCTAATCTGATGTGACTTAATACTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR GCA 72 bp | GCATGCTTTAGAGTTGAACTTGGAACGCTCTGCTTATaGCAGGAAGCTATCTGGTTCCCTCCATCCTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: ACFRVELGTLCL*QEAIWFPPSCW Trigger: CCAACAGGATGGAGGGAACCAGATAGCTTCCTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR GCA 72 bp | TTGTCAGCATGCTTTAGAGTTGAACTTGGAACGCTCTaGTTATGCCAGGAAGCTATCTGGTTCCCTCCATCC | + |
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Preference number: 3 (lower is better) Translates to: LSACFRVELGTL*LCQEAIWFPPS Trigger: GGATGGAGGGAACCAGATAGCTTCCTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR CCA 72 bp | CCTAAACACAGAATCATTAGTAGAATAACTTTTCCTTaGTGCCTAGGGCTGTACTTGACTCCAGGCGGACAG | + |
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Preference number: 3 (lower is better) Translates to: PKHRIISRITFP*CLGLYLTPGGQ Trigger: CTGTCCGCCTGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCTGTGTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR GCA 72 bp | AAACACAGAATCATTAGTAGAATAACTTTTCCTTGGTaGCTAGGGCTGTACTTGACTCCAGGCGGACAGATA | + |
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Preference number: 3 (lower is better) Translates to: KHRIISRITFPW*LGLYLTPGGQI Trigger: TATCTGTCCGCCTGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCTGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR-3UTR CAA 90 bp | AGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTTGACTCCAGGTCGATATCTCCTTTaGCCCTTTAGTGAGGATTTT | + |
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Preference number: 3 (lower is better) Translates to: RIISRITFPWCLGLYLTPGRYLL*PFSEDF Trigger: AAAATCCTCACTAAAGGGCAAAAGGAGATATCGACC...TGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| 3UTR GCA 72 bp | TGTTTTTACACTGATCCAACCCAATTCAGTATTTCCTaGCATTTCTTTCTAGATTCGACTTCTGAGATGCAA | + |
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Preference number: 3 (lower is better) Translates to: CFYTDPTQFSIS*HFFLDSTSEMQ Trigger: TTGCATCTCAGAAGTCGAATCTAGAAAGAAATGGCAGGAAATACTGAATTGGGTTGGATCAGTGTAAAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| 3UTR TCA 72 bp | TTTAAGTACAACATGCTTTCCTTGATGTTTTTACACTaGTCCAACCCAATTCAGTATTTCCTGCCATTTCTT | + |
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Preference number: 3 (lower is better) Translates to: FKYNMLSLMFLH*SNPIQYFLPFL Trigger: AAGAAATGGCAGGAAATACTGAATTGGGTTGGATCAGTGTAAAAACATCAAGGAAAGCATGTTGTACTTAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| CDS-3UTR GCA 90 bp | TTGTGTGTGATTTGGAAATTGCAAGTGGGGTTGGGGTGGATGGAGCACATAGTTTCCCACTCTAGCACCTaGACCTGCAGGGCTGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LCVIWKLQVGLGWMEHIVSHSST*TCRAVR Trigger: GCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGGA...AACTATGTGCTCCATCCACCCCAACCCCACTTGCAATTTCCAAATCACACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS-3UTR CCA 90 bp | AGGAGAACCAGGGACCTCAGTCTAGAGTGTTTCCTATCTAGTACCTGCAAGTCCACTTTGTGGTTGGGTTaGCCGCGCTTCAGGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RRTRDLSLECFLSSTCKSTLWLG*PRFRVP Trigger: TGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGT...GGACTTGCAGGTACTAGATAGGAAACACTCTAGACTGAGGTCCCTGGTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS-3UTR GCA 90 bp | AGGAGAACCAGGGACCTCAGTCTAGAGTGTTTCCTATCTAGTACCTGCAAGTCCGTGTACACAAAGCACTaGACACTGTCCCCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RRTRDLSLECFLSSTCKSVYTKH*TLSPGS Trigger: TGACCCTGGGGACAGTGTGCAGTGCTTTGTGTACAC...GGACTTGCAGGTACTAGATAGGAAACACTCTAGACTGAGGTCCCTGGTTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS-3UTR GCA 90 bp | AATGTTTTGTCAGCATGCTTTAGAGTTGAACTTGGAACGCTCTGCTTATGCCAGGGCCGCGCTTCAGGGTaGCATACACGAAGATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NVLSACFRVELGTLCLCQGRASG*HTRRCG Trigger: CCCACATCTTCGTGTATGGCACCCTGAAGCGCGGCC...CTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAAAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS-3UTR GCA 90 bp | TTGGAAATTGCAAGTGGGGTTGGGGTGGATGGAGCACATAGTTTAAGTACAACATCACACAGTGGCCCTTaGCTGGTAGGTACAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LEIASGVGVDGAHSLSTTSHSGP*LVGTAA Trigger: GGCTGCTGTACCTACCAGGCAAGGGCCACTGTGTGA...TGTTGTACTTAAACTATGTGCTCCATCCACCCCAACCCCACTTGCAATTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| CDS-3UTR GCA 90 bp | ACCAGTCCTAAACACAGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGGGCCGCGCTTCAGGGTaGCATACACGAAGATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TSPKHRIISRITFPWCLGGRASG*HTRRCG Trigger: CCCACATCTTCGTGTATGGCACCCTGAAGCGCGGCC...CCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCTGTGTTTAGGACTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR GCA 90 bp | TTGTGTGTGATTTGGAAATTGCAAGTGGGGTTGGGGTGGATGGAGCACATAGTTCTGTGCGCTGGTACATaGTGGGGCAGTCTTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LCVIWKLQVGLGWMEHIVLCAGT*WGSLQS Trigger: ACTTTGAAGACTGCCCCAGCATGTACCAGCGCACAG...AACTATGTGCTCCATCCACCCCAACCCCACTTGCAATTTCCAAATCACACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| 3UTR CAA 72 bp | AGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTaGACTCCAGGCGGACAGATACTGATGATGTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: SRITFPWCLGLY*TPGGQILMMWS Trigger: CGACCACATCATCAGTATCTGTCCGCCTGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR GCA 90 bp | AGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTTGACTCCATCACACAGTGGCCCTTaGCTGGTAGGTACAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RIISRITFPWCLGLYLTPSHSGP*LVGTAA Trigger: GGCTGCTGTACCTACCAGGCAAGGGCCACTGTGTGA...TGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR CCA 90 bp | AGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTTGACTCCAACTTTGTGGTTGGGTTaGCCGCGCTTCAGGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RIISRITFPWCLGLYLTPTLWLG*PRFRVP Trigger: TGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGT...TGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR GCA 90 bp | CAACATGCTTTCCTTGATGTTTTTACACTGATCCAACCCAATTCAGTATTTCCTGGCCGCGCTTCAGGGTaGCATACACGAAGATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QHAFLDVFTLIQPNSVFPGRASG*HTRRCG Trigger: CCCACATCTTCGTGTATGGCACCCTGAAGCGCGGCC...AGGAAATACTGAATTGGGTTGGATCAGTGTAAAAACATCAAGGAAAGCATGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| CDS-3UTR TCA 90 bp | AGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTTGACTCCAGTGAATGGTCCAGCATaGCTTTGTGGTTGGGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: RIISRITFPWCLGLYLTPVNGPA*LCGWVG Trigger: GCCAACCCAACCACAAAGTCATGCTGGACCATTCAC...TGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR CCA 90 bp | AATGTTTTGTCAGCATGCTTTAGAGTTGAACTTGGAACGCTCTGCTTATGCCAGTGCGCTGGTACATGCTaGGGCAGTCTTCAAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NVLSACFRVELGTLCLCQCAGTC*GSLQSH Trigger: ATGACTTTGAAGACTGCCCCAGCATGTACCAGCGCA...CTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAAAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS-3UTR CCA 90 bp | GTACAACATGCTTTCCTTGATGTTTTTACACTGATCCAACCCAATTCAGTATTTTGCAGGGCTGTGCGCTaGTACATGCTGGGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VQHAFLDVFTLIQPNSVFCRAVR*YMLGQS Trigger: AGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCA...AAATACTGAATTGGGTTGGATCAGTGTAAAAACATCAAGGAAAGCATGTTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS-3UTR CCA 90 bp | AGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGCTGTACTTGACTCCATTTCCTGTCACACAGTaGCCCTTGCCTGGTAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RIISRITFPWCLGLYLTPFPVTQ*PLPGRY Trigger: GTACCTACCAGGCAAGGGCCACTGTGTGACAGGAAA...TGGAGTCAAGTACAGCCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR TCA 90 bp | TACACTGATCCAACCCAATTCAGTATTTCCTGCCATTTCTTTCTAGATTCGACTGTGAATGGTCCAGCATaGCTTTGTGGTTGGGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: YTDPTQFSISCHFFLDSTVNGPA*LCGWVG Trigger: GCCAACCCAACCACAAAGTCATGCTGGACCATTCAC...AGTCGAATCTAGAAAGAAATGGCAGGAAATACTGAATTGGGTTGGATCAGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| CDS-3UTR TCA 90 bp | ACTGATCCAACCCAATTCAGTATTTCCTGCCATTTCTTTCTAGATTCGACTTCTGTGAATGGTCCAGCATaGCTTTGTGGTTGGGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TDPTQFSISCHFFLDSTSVNGPA*LCGWVG Trigger: GCCAACCCAACCACAAAGTCATGCTGGACCATTCAC...AGAAGTCGAATCTAGAAAGAAATGGCAGGAAATACTGAATTGGGTTGGATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| CDS-3UTR CCA 90 bp | TGTTTTTACACTGATCCAACCCAATTCAGTATTTCCTGCCATTTCTTTCTAGATACTTTGTGGTTGGGTTaGCCGCGCTTCAGGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CFYTDPTQFSISCHFFLDTLWLG*PRFRVP Trigger: TGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGT...ATCTAGAAAGAAATGGCAGGAAATACTGAATTGGGTTGGATCAGTGTAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| 3UTR CAA 72 bp | ACAAAAATGTTTTGTCAGCATGCTTTAGAGTTGAACTaGGAACGCTCTGCTTATGCCAGGAAGCTATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TKMFCQHALELN*ERSAYARKLSG Trigger: ACCAGATAGCTTCCTGGCATAAGCAGAGCGTTCCAAGTTCAACTCTAAAGCATGCTGACAAAACATTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS GCA 90 bp | GGTCACCGTCACCCTCCCACTCTAGCACCTGCACCTGCAGGGCTGTaGGCTGGTACATGCTGGGGCAGTCTTCAAAGTCATCCAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: GHRHPPTLAPAPAGL*AGTCWGSLQSHPGN Trigger: GTTTCCTGGATGACTTTGAAGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGGAGGGTGACGGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 ENSMUST00000162164.2 |
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| CDS CCA 90 bp | CCGTCACCCTCCCACTCTAGCACCTGCACCTGCAGGGCTGTGCGCTaGTACATGCTGGGGCAGTCTTCAAAGTCATCCAGGAAACGCAAC | + |
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Preference number: 5 (lower is better) Translates to: PSPSHSSTCTCRAVR*YMLGQSSKSSRKRN Trigger: GTTGCGTTTCCTGGATGACTTTGAAGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGGAGGGTGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 ENSMUST00000162164.2 |
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| CDS TCA 90 bp | AGCCTCGGCCTCGGAAGGCTGCTAAGCCATGTGAATGGTCCAGCATaGCTTTGTGGTTGGGTTGGCCGCGCTTCAGGGTGCCATACACGA | + |
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Preference number: 5 (lower is better) Translates to: SLGLGRLLSHVNGPA*LCGWVGRASGCHTR Trigger: TCGTGTATGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCGAGGCCGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS CCA 90 bp | TCAACTGTGCAGCCTCGGCCTCGGAAGGCTGCTAAGCCATGTGAATaGTCCAGCATGACTTTGTGGTTGGGTTGGCCGCGCTTCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: STVQPRPRKAAKPCE*SSMTLWLGWPRFRV Trigger: CACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCGAGGCCGAGGCTGCACAGTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS GCA 90 bp | CCTCCCACTCTAGCACCTGCACCTGCAGGGCTGTGCGCTGGTACATaGTGGGGCAGTCTTCAAAGTCATCCAGGAAACGCAACATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PPTLAPAPAGLCAGT*WGSLQSHPGNATSA Trigger: AGCAGATGTTGCGTTTCCTGGATGACTTTGAAGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 ENSMUST00000162164.2 |
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| CDS CCA 90 bp | CCCACTCTAGCACCTGCACCTGCAGGGCTGTGCGCTGGTACATGCTaGGGCAGTCTTCAAAGTCATCCAGGAAACGCAACATCTGCTCGT | + |
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Preference number: 5 (lower is better) Translates to: PTLAPAPAGLCAGTC*GSLQSHPGNATSAR Trigger: ACGAGCAGATGTTGCGTTTCCTGGATGACTTTGAAGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 ENSMUST00000162164.2 |
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| CDS GCA 90 bp | GTATGTTGTGCTCGCCTGCAATCACCAGTGGGAAGGACTCAACTGTaGAGCCTCGGCCTCGGAAGGCTGCTAAGCCATGTGAATGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: VCCARLQSPVGRTQL*SLGLGRLLSHVNGP Trigger: TGGACCATTCACATGGCTTAGCAGCCTTCCGAGGCCGAGGCTGCACAGTTGAGTCCTTCCCACTGGTGATTGCAGGCGAGCACAACATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS GCA 90 bp | TCTGCTCGTCCACCTCGTAGATCTCACCTGTCACACAGTGGCCCTTaGCTGGTAGGTACAGCAGCCAAGGTATGTTGTGCTCGCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SARPPRRSHLSHSGP*LVGTAAKVCCARLQ Trigger: TTGCAGGCGAGCACAACATACCTTGGCTGCTGTACCTACCAGGCAAGGGCCACTGTGTGACAGGTGAGATCTACGAGGTGGACGAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 ENSMUST00000162164.2 |
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| CDS CCA 90 bp | CCTCGGAAGGCTGCTAAGCCATGTGAATGGTCCAGCATGACTTTGTaGTTGGGTTGGCCGCGCTTCAGGGTGCCATACACGAAGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: PRKAAKPCEWSSMTL*LGWPRFRVPYTKMW Trigger: CCACATCTTCGTGTATGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS GCA 90 bp | GACAGATGTGTCCCCCTTTCCAGTTTCCTGTCACACAGTGGCCCTTaGCTGGTAGGTACAGCAGCCAAGGTATGTTGTGCTCGCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: DRCVPLSSFLSHSGP*LVGTAAKVCCARLQ Trigger: TTGCAGGCGAGCACAACATACCTTGGCTGCTGTACCTACCAGGCAAGGGCCACTGTGTGACAGGAAACTGGAAAGGGGGACACATCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR CAA 90 bp | CTGAGATGCAACTGCAGCCTAGTCTTTTTAGTCTCAGAAGATGCCATCTTCAGGGACTTTGTGGTTGGGTaGGCCGCGCTTCAGGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LRCNCSLVFLVSEDAIFRDFVVG*AALQGA Trigger: GGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTC...CCTGAAGATGGCATCTTCTGAGACTAAAAAGACTAGGCTGCAGTTGCATCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS GCA 90 bp | CTCAGAATCATAGCTTTCATGGTAGGGAAGAAACAGCCACTCGGGTaGATAGGTGGCTGTAGTGTACACAAAGCACTGCACACTGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LRIIAFMVGKKQPLG*IGGCSVHKALHTVP Trigger: GGGGACAGTGTGCAGTGCTTTGTGTACACTACAGCCACCTATGCACCCGAGTGGCTGTTTCTTCCCTACCATGAAAGCTATGATTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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| CDS-3UTR CAA 90 bp | ACCAGTCCTAAACACAGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAGGGGACTTTGTGGTTGGGTaGGCCGCGCTTCAGGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: TSPKHRIISRITFPWCLGDFVVG*AALQGA Trigger: GGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTC...CCCTAGGCACCAAGGAAAAGTTATTCTACTAATGATTCTGTGTTTAGGACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS-3UTR CAA 90 bp | CATGCTTTCCTTGATGTTTTTACACTGATCCAACCCAATTCAGTATTTCCTGCCAGCATGACTTTGTGGTaGGGTTGGCCGCGCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HAFLDVFTLIQPNSVFPASMTLW*GWPRFR Trigger: CCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCT...GGCAGGAAATACTGAATTGGGTTGGATCAGTGTAAAAACATCAAGGAAAGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| CDS-3UTR CAA 90 bp | GTACAACATGCTTTCCTTGATGTTTTTACACTGATCCAACCCAATTCAGTATTTGACTTTGTGGTTGGGTaGGCCGCGCTTCAGGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: VQHAFLDVFTLIQPNSVFDFVVG*AALQGA Trigger: GGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTC...AAATACTGAATTGGGTTGGATCAGTGTAAAAACATCAAGGAAAGCATGTTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000161322.3 |
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| CDS-3UTR CAA 90 bp | ACAACCAGTCCTAAACACAGAATCATTAGTAGAATAACTTTTCCTTGGTGCCTAAGCATGACTTTGTGGTaGGGTTGGCCGCGCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TTSPKHRIISRITFPWCLSMTLW*GWPRFR Trigger: CCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCT...TAGGCACCAAGGAAAAGTTATTCTACTAATGATTCTGTGTTTAGGACTGGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS GCA 72 bp | TCCCCAGGGTCACCGTCACCCTCCCACTCTAGCACCTaGACCTGCAGGGCTGTGCGCTGGTACATGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPGSPSPSHSST*TCRAVRWYMLG Trigger: CCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGGAGGGTGACGGTGACCCTGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 |
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| CDS CCA 72 bp | CAGCCTCGGCCTCGGAAGGCTGCTAAGCCATGTGAATaGTCCAGCATGACTTTGTGGTTGGGTTGGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: QPRPRKAAKPCE*SSMTLWLGWPR Trigger: GCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCGAGGCCGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS CCA 72 bp | TCCCACTCTAGCACCTGCACCTGCAGGGCTGTGCGCTaGTACATGCTGGGGCAGTCTTCAAAGTCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SHSSTCTCRAVR*YMLGQSSKSSR Trigger: CCTGGATGACTTTGAAGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 ENSMUST00000162164.2 |
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| CDS CAA 90 bp | CGGAAGGCTGCTAAGCCATGTGAATGGTCCAGCATGACTTTGTGGTaGGGTTGGCCGCGCTTCAGGGTGCCATACACGAAGATGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RKAAKPCEWSSMTLW*GWPRFRVPYTKMWA Trigger: GGCCCACATCTTCGTGTATGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS CAA 90 bp | CGGCCTCGGAAGGCTGCTAAGCCATGTGAATGGTCCAGCATGACTTaGTGGTTGGGTTGGCCGCGCTTCAGGGTGCCATACACGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: RPRKAAKPCEWSSMT*WLGWPRFRVPYTKM Trigger: CATCTTCGTGTATGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCGAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS TCA 72 bp | CTCGGAAGGCTGCTAAGCCATGTGAATGGTCCAGCATaGCTTTGTGGTTGGGTTGGCCGCGCTTCAGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LGRLLSHVNGPA*LCGWVGRASGC Trigger: GCACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS GCA 72 bp | CTAGCACCTGCACCTGCAGGGCTGTGCGCTGGTACATaGTGGGGCAGTCTTCAAAGTCATCCAGGAAACGCA | + |
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Preference number: 6 (lower is better) Translates to: LAPAPAGLCAGT*WGSLQSHPGNA Trigger: TGCGTTTCCTGGATGACTTTGAAGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038075.12 ENSMUST00000160401.8 ENSMUST00000162164.2 |
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| CDS CCA 72 bp | CAGCCAAGGTATGTTGTGCTCGCCTGCAATCACCAGTaGGAAGGACTCAACTGTGCAGCCTCGGCCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: QPRYVVLACNHQ*EGLNCAASASE Trigger: TTCCGAGGCCGAGGCTGCACAGTTGAGTCCTTCCCACTGGTGATTGCAGGCGAGCACAACATACCTTGGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS CCA 72 bp | GCTGCTAAGCCATGTGAATGGTCCAGCATGACTTTGTaGTTGGGTTGGCCGCGCTTCAGGGTGCCATACACG | + |
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Preference number: 6 (lower is better) Translates to: AAKPCEWSSMTL*LGWPRFRVPYT Trigger: CGTGTATGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS GCA 72 bp | GTCCCCCTTTCCAGTTTCCTGTCACACAGTGGCCCTTaGCTGGTAGGTACAGCAGCCAAGGTATGTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VPLSSFLSHSGP*LVGTAAKVCCA Trigger: AGCACAACATACCTTGGCTGCTGTACCTACCAGGCAAGGGCCACTGTGTGACAGGAAACTGGAAAGGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110679.9 |
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| CDS CAA 72 bp | GCTAAGCCATGTGAATGGTCCAGCATGACTTTGTGGTaGGGTTGGCCGCGCTTCAGGGTGCCATACACGAAG | + |
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Preference number: 6 (lower is better) Translates to: AKPCEWSSMTLW*GWPRFRVPYTK Trigger: CTTCGTGTATGGCACCCTGAAGCGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038075.12 ENSMUST00000110679.9 ENSMUST00000160401.8 ENSMUST00000161322.3 ENSMUST00000162164.2 |
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| CDS GCA 72 bp | ATAGCTTTCATGGTAGGGAAGAAACAGCCACTCGGGTaGATAGGTGGCTGTAGTGTACACAAAGCACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: IAFMVGKKQPLG*IGGCSVHKALH Trigger: GTGCAGTGCTTTGTGTACACTACAGCCACCTATGCACCCGAGTGGCTGTTTCTTCCCTACCATGAAAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038075.12 |
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