Pregenerated sensors for GFY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095276Ensembl transcript IDs: ENSMUST00000179443.3, ENSMUST00000211004.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGGCGGCATCCCAGAGGGCTaGAGCATCCCCTGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SAWLWGPSKALKLGRVCGGIPEG*SIPWRS Trigger: TGACCTCCAGGGGATGCTCCAGCCCTCTGGGATGCC...GCCGCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGGCGCGCCCTGCAATCCTTGCTaGGGGAAGAGGGATATCTGG | + |
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Preference number: 4 (lower is better) Translates to: AWLWGPSKALKLGRVCGAPCNPC*GKRDIW Trigger: CCAGATATCCCTCTTCCCTCAGCAAGGATTGCAGGG...CGCGCCGCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR GCA 90 bp | GGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTCAGCGACCACAGGCTaGCCTGGTGAGGGAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GSSAWLWGPSKALKLGRVSATTG*PGEGAA Trigger: GGCAGCTCCCTCACCAGGGCAGCCTGTGGTCGCTGA...GACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | TTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGCGGGGGCGTGGAAGGTaGAGGCTGCGTGGCGATGTG | + |
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Preference number: 4 (lower is better) Translates to: LGSSAWLWGPSKALKLGRRGRGR*RLRGDV Trigger: CACATCGCCACGCAGCCTCCACCTTCCACGCCCCCG...CCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGGCGCGTTTCTAGAGTACCAGTaGGCATCCCAGAGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AWLWGPSKALKLGRVCGAFLEYQ*ASQRAG Trigger: TCCAGCCCTCTGGGATGCCCACTGGTACTCTAGAAA...CGCGCCGCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCCTGTCCCGGAGCCGGTaGTGGGCAAAGGACCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: GSSAWLWGPSKALKLGRVLSRSR*WAKDLC Trigger: ACACAGGTCCTTTGCCCACCACCGGCTCCGGGACAG...GACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | AGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCAGGAGACTCTGGGGGTaGGGTGTTGGAGGGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SSAWLWGPSKALKLGRVCRRLWG*GVGGVR Trigger: CCTAACCCCTCCAACACCTCACCCCCAGAGTCTCCT...GCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | AGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCTCAAGCCTGGCTCACTaGGAGTGGTGGCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SSAWLWGPSKALKLGRVCSSLAH*EWWLPP Trigger: GGGAGGAAGCCACCACTCCCAGTGAGCCAGGCTTGA...GCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCCTGGGGAATCTGAGGTaGACAGGCCAGGGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GSSAWLWGPSKALKLGRVLGNLR*TGQGWQ Trigger: TTGCCACCCCTGGCCTGTCCACCTCAGATTCCCCAG...GACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | CGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGGGGTGGCAACTCGGGTaGCTGCAGGGGCTTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RGGLLGSSAWLWGPSKALGWQLG*LQGLLG Trigger: GCCCAGAAGCCCCTGCAGTCACCCGAGTTGCCACCC...CAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR GCA 90 bp | AGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGAGTTCTGGGGTACGTaGAGCTCTTTGGTCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSAWLWGPSKALKLGRVCEFWGT*SSLVPG Trigger: CCCAGGGACCAAAGAGCTGCACGTACCCCAGAACTC...GCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR GCA 90 bp | GGCGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATGTGGAAGGTGGAGGCTaGGTGGCGATGTGGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GEVVYWEVLPGSGVPLRHVEGGG*VAMWEG Trigger: GCCCTCCCACATCGCCACGCAGCCTCCACCTTCCAC...ATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | TGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGGCGCGGTCGCTACTGATGTGAGCTaGTCAGGTATGGGAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: WLWGPSKALKLGRVCGAVATDVS*SGMGVS Trigger: AGAGACTCCCATACCTGACCAGCTCACATCAGTAGC...GACCGCGCCGCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGGCTTGGAGCTGAGGAATTaGGTGGGTCTGGGACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SAWLWGPSKALKLGRVCGLELRN*VGLGLG Trigger: ACCAAGTCCCAGACCCACCCAATTCCTCAGCTCCAA...GCCGCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGGCGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCAGCTGGGACTCAAGCCTaGCTCACTGGGAGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRGGLLGSSAWLWGPSKAAGTQA*LTGSGG Trigger: GCCACCACTCCCAGTGAGCCAGGCTTGAGTCCCAGC...TGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGGCGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCAGACTGCAGGGGCTTCTaGGCTGGGACTCAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GRGGLLGSSAWLWGPSKADCRGF*AGTQAW Trigger: CCAGGCTTGAGTCCCAGCCCAGAAGCCCCTGCAGTC...TGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GGGCGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATGGTGGCTTCCTCCCTaGAGGTTGTTGGCTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRGGLLGSSAWLWGPSKAWWLPP*RLLAGW Trigger: CCACCCAGCCAACAACCTTCAGGGAGGAAGCCACCA...TGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | TTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCGGTCCCTGGGGAATCTaGGGTGGACAGGCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLGSSAWLWGPSKALKLGGPWGI*GGQARG Trigger: ACCCCTGGCCTGTCCACCTCAGATTCCCCAGGGACC...GCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCGTACGTGCAGCTCTTTaGTCCCTGGGGAATCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSSAWLWGPSKALKLGRVVRAAL*SLGNLR Trigger: CCTCAGATTCCCCAGGGACCAAAGAGCTGCACGTAC...GACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GGCGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATGATGTGAGGGGAAGCTaGGGGTGGTGTCTCGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: GEVVYWEVLPGSGVPLRHDVRGS*GWCLGV Trigger: CACTCCGAGACACCACCCTCAGCTTCCCCTCACATC...ATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGGCATTTCAGGGGATTCATaGTGTAGAGTTGGTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SAWLWGPSKALKLGRVCGISGDS*CRVGVG Trigger: CCCCACACCAACTCTACACCATGAATCCCCTGAAAT...GCCGCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCATTTTTGTGGAGATGTaGGGGGAAGCTGAGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GSSAWLWGPSKALKLGRVIFVEM*GEAEGG Trigger: ACCACCCTCAGCTTCCCCTCACATCTCCACAAAAAT...GACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCAGACTCTTCACCAGGTaGGAGTTTGGGGGTATCTCT | + |
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Preference number: 4 (lower is better) Translates to: GSSAWLWGPSKALKLGRVRLFTR*EFGGIS Trigger: AGAGATACCCCCAAACTCTCACCTGGTGAAGAGTCT...GACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR GCA 90 bp | GGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGCTCAGGAGGATGGCTTaGAGAGGATCCTGGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GLLGSSAWLWGPSKALKLLRRMA*RGSWGR Trigger: CCTACCCCAGGATCCTCTGCAAGCCATCCTCCTGAG...CAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | TTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGGAAATTCCAGTTaGGTCAGGTTTGGGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LLGSSAWLWGPSKALKLGRGNSS*VRFGGL Trigger: GAGACCCCCAAACCTGACCCAACTGGAATTTCCCCG...GCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | TTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGCACCAGGTGAGAGTTTaGGGGTATCTCTTTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LGSSAWLWGPSKALKLGRHQVRV*GYLFWR Trigger: TCTCCAAAAGAGATACCCCCAAACTCTCACCTGGTG...CCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGCTAGGGATTTGGAGCTaGGGAATTGGGTGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLLGSSAWLWGPSKALKLLGIWS*GIGWVW Trigger: CCAGACCCACCCAATTCCTCAGCTCCAAATCCCTAG...CAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR GCA 90 bp | GGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGACAGCAGCAGGAAGATaGCAATCAGCAGCCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GGLLGSSAWLWGPSKALKTAAGR*QSAALS Trigger: GGACAGGGCTGCTGATTGGCATCTTCCTGCTGCTGT...CTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | CGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGCTCCCTGAAGGTTGTTaGCTGGGTGGGAAGACTAGA | + |
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Preference number: 4 (lower is better) Translates to: RGGLLGSSAWLWGPSKALLPEGC*LGGKTR Trigger: TCTAGTCTTCCCACCCAGCCAACAACCTTCAGGGAG...CAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | CGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGGGAGGGACTCATTTGTaGAGTACCCTGAGATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGGLLGSSAWLWGPSKALGGTHL*STLRFC Trigger: GCAGAATCTCAGGGTACTTCACAAATGAGTCCCTCC...CAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | TTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCAGTTGGGTCAGGTTTaGGGGTCTCAGAAGGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: LLGSSAWLWGPSKALKLGQLGQV*GSQKVY Trigger: GTAAACCTTCTGAGACCCCCAAACCTGACCCAACTG...GCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGCTGAAGGTTGTTGGCTaGGTGGGAAGACTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLLGSSAWLWGPSKALKLLKVVG*VGRLEL Trigger: CAGCTCTAGTCTTCCCACCCAGCCAACAACCTTCAG...CAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGATTCTGCTACTGATGTaGGCTGGTCAGGTATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GGLLGSSAWLWGPSKALKILLLM*AGQVWE Trigger: CTCCCATACCTGACCAGCTCACATCAGTAGCAGAAT...CTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGAGGGGTTAGGTTTTaGGGTTTCTGGAGAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GLLGSSAWLWGPSKALKLGGVRF*GFWRVR Trigger: TCTGACTCTCCAGAAACCCCAAAACCTAACCCCTCC...CAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR TCA 90 bp | GGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGAGTGGTGAGAAAGACTaGCTGTGGACTTTCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GLLGSSAWLWGPSKALKLSGEKD*LWTFCR Trigger: CCTACAGAAAGTCCACAGTCAGTCTTTCTCACCACT...CAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CCA 90 bp | GGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCCCTTAAGATTTTTGTaGAGATGTGAGGGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGLLGSSAWLWGPSKALKPLRFL*RCEGKL Trigger: CAGCTTCCCCTCACATCTCCACAAAAATCTTAAGGG...CTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 90 bp | CATCTCCGCTGTCCCGGAGCCGGTGGTGGGCAAAGGACCTGTGTCTaGAGGCTCGGCGGTAGAGGCACCACAGCAGCAGGAAGATGCCAA | + |
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Preference number: 5 (lower is better) Translates to: HLRCPGAGGGQRTCV*RLGGRGTTAAGRCQ Trigger: TTGGCATCTTCCTGCTGCTGTGGTGCCTCTACCGCCGAGCCTCCAGACACAGGTCCTTTGCCCACCACCGGCTCCGGGACAGCGGAGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS GCA 90 bp | TGTGTCTGGAGGCTCGGCGGTAGAGGCACCACAGCAGCAGGAAGATaGCAATCAGCAGCCCTGTCCCCGCGAAGAACAGGCACAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: CVWRLGGRGTTAAGR*QSAALSPRRTGTEP Trigger: GGGCTCTGTGCCTGTTCTTCGCGGGGACAGGGCTGCTGATTGGCATCTTCCTGCTGCTGTGGTGCCTCTACCGCCGAGCCTCCAGACACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 90 bp | GGCAACTCGGGTGACTGCAGGGGCTTCTGGGCTGGGACTCAAGCCTaGCTCACTGGGAGTGGTGGCTTCCTCCCTGAAGGTTGTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GNSGDCRGFWAGTQA*LTGSGGFLPEGCWL Trigger: CAGCCAACAACCTTCAGGGAGGAAGCCACCACTCCCAGTGAGCCAGGCTTGAGTCCCAGCCCAGAAGCCCCTGCAGTCACCCGAGTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 90 bp | GAAGTAGAGATCCAGCGGGTCCTTCGGGGCATCGAGGTGCAAGACTaGTTCATCTCCGCTGTCCCGGAGCCGGTGGTGGGCAAAGGACCT | + |
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Preference number: 5 (lower is better) Translates to: EVEIQRVLRGIEVQD*FISAVPEPVVGKGP Trigger: AGGTCCTTTGCCCACCACCGGCTCCGGGACAGCGGAGATGAACCAGTCTTGCACCTCGATGCCCCGAAGGACCCGCTGGATCTCTACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 90 bp | CCTGGCTCACTGGGAGTGGTGGCTTCCTCCCTGAAGGTTGTTGGCTaGGTGGGAAGACTAGAGCTGGGTTCCAAGTCAGAGGTCCTAGCC | + |
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Preference number: 5 (lower is better) Translates to: PGSLGVVASSLKVVG*VGRLELGSKSEVLA Trigger: GGCTAGGACCTCTGACTTGGAACCCAGCTCTAGTCTTCCCACCCAGCCAACAACCTTCAGGGAGGAAGCCACCACTCCCAGTGAGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CAA 90 bp | TGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCGGCGCGGTCAAGGTTTACCAAGTGTaGCTCTGGAGGGACTCATTT | + |
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Preference number: 5 (lower is better) Translates to: WLWGPSKALKLGRVCGAVKVYQV*LWRDSF Trigger: AAATGAGTCCCTCCAGAGCAACACTTGGTAAACCTT...GACCGCGCCGCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CAA 90 bp | GGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGTGGGGAATTGGGTTaGGGGGACAACAGTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: GSSAWLWGPSKALKLGRVCGELG*GDNSGI Trigger: AATCCCACTGTTGTCCCCCAAACCCAATTCCCCACA...GACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CAA 90 bp | AGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCCGGGTCTGCCGTTTCTGTTACATTTaGGCTGGGGGATGTGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: SSAWLWGPSKALKLGRVCRFCYI*AGGCGE Trigger: TTCCCCACATCCCCCAGCCAAAATGTAACAGAAACG...GCAGACCCGGCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CAA 90 bp | GGGCGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCAGGTCAGGGTGGGTGGTaGGTTCCAGTGCAGAATTTA | + |
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Preference number: 5 (lower is better) Translates to: GRGGLLGSSAWLWGPSKAGQGGW*VPVQNL Trigger: TAAATTCTGCACTGGAACCAACCACCCACCCTGACC...TGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CAA 90 bp | TTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCGGGGCCCTGCAATCCTaGCTGAGGGAAGAGGGATAT | + |
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Preference number: 5 (lower is better) Translates to: LLGSSAWLWGPSKALKLGGALQS*LREEGY Trigger: ATATCCCTCTTCCCTCAGCAAGGATTGCAGGGCCCC...GCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CAA 90 bp | TTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCTTTGGAGCTGAGGAATaGGGTGGGTCTGGGACTTGG | + |
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Preference number: 5 (lower is better) Translates to: LLGSSAWLWGPSKALKLGFGAEE*GGSGTW Trigger: CCAAGTCCCAGACCCACCCAATTCCTCAGCTCCAAA...GCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS-3UTR CAA 90 bp | CGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGACCACGATGATAGTGTaGACTGTGTCTCCTCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RGGLLGSSAWLWGPSKALTTMIV*TVSPRL Trigger: CAGCCGAGGAGACACAGTCAACACTATCATCGTGGT...CAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 90 bp | GGGTTTCTGGAGAGTCAGACGGGGAAATTCCAGTTGGGTCAGGTTTaGGGGTCTCAGAAGGTTTACCAAGTGTTGCTCTGGAGGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: GFLESQTGKFQLGQV*GSQKVYQVLLWRDS Trigger: TGAGTCCCTCCAGAGCAACACTTGGTAAACCTTCTGAGACCCCCAAACCTGACCCAACTGGAATTTCCCCGTCTGACTCTCCAGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS-3UTR CAA 90 bp | GGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCCAGTTGGGTCAGGTTaGGGGGTCTCAGAAGGTTTA | + |
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Preference number: 5 (lower is better) Translates to: GGLLGSSAWLWGPSKALKPVGSG*GVSEGL Trigger: TAAACCTTCTGAGACCCCCAAACCTGACCCAACTGG...CTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS TCA 90 bp | TCGGAGTGCTCAGGAGGATGGCTTGCAGAGGATCCTGGGGTAGGTTaGTCTCTAGTAAGATTTTCTAGAGTACCAGTGGGCATCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SECSGGWLAEDPGVG*SLVRFSRVPVGIPE Trigger: CTCTGGGATGCCCACTGGTACTCTAGAAAATCTTACTAGAGATCAACCTACCCCAGGATCCTCTGCAAGCCATCCTCCTGAGCACTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS-3UTR CAA 90 bp | GGCGAGGTGGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTCTCCCTTAAGATTTTaGTGGAGATGTGAGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GEVVYWEVLPGSGVPLRHSPLRF*WRCEGK Trigger: CTTCCCCTCACATCTCCACAAAAATCTTAAGGGAGA...ATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACCACCTCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS TCA 90 bp | GATGTGGGGAATTGGGTTTGGGGGACAACAGTGGGATTAGAGTTGTaGGTGGTGAGAAAGACTGACTGTGGACTTTCTGTAGGGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: DVGNWVWGTTVGLEL*VVRKTDCGLSVGSG Trigger: CCCTGACCCTACAGAAAGTCCACAGTCAGTCTTTCTCACCACTCACAACTCTAATCCCACTGTTGTCCCCCAAACCCAATTCCCCACATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS-3UTR CAA 90 bp | TTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGGGCATTCATGGTGTAGAGTaGGTGTGGGGTCAGTGTATA | + |
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Preference number: 5 (lower is better) Translates to: LLGSSAWLWGPSKALKLGIHGVE*VWGQCI Trigger: TATACACTGACCCCACACCAACTCTACACCATGAAT...GCCCAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS TCA 90 bp | TGGAGGGACTCATTTGTGAAGTACCCTGAGATTCTGCTACTGATGTaGGCTGGTCAGGTATGGGAGTCTCTAGAGAAAGAAAGGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: WRDSFVKYPEILLLM*AGQVWESLEKERGW Trigger: CCAGCCCCTTTCTTTCTCTAGAGACTCCCATACCTGACCAGCTCACATCAGTAGCAGAATCTCAGGGTACTTCACAAATGAGTCCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS-3UTR CAA 90 bp | GGTTTATTGGGAAGTTCTGCCTGGCTCTGGGGTCCCTCTAAGGCATTGAAGCTGTTGGGGGTATCTCTTTaGGAGATTTCAGGGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: GLLGSSAWLWGPSKALKLLGVSL*EISGDS Trigger: TGAATCCCCTGAAATCTCCAAAAGAGATACCCCCAA...CAGCTTCAATGCCTTAGAGGGACCCCAGAGCCAGGCAGAACTTCCCAATAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | GCCAGGGGTGGCAACTCGGGTGACTGCAGGGGCTTCTaGGCTGGGACTCAAGCCTGGCTCACTGGGAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: ARGGNSGDCRGF*AGTQAWLTGSG Trigger: ACCACTCCCAGTGAGCCAGGCTTGAGTCCCAGCCCAGAAGCCCCTGCAGTCACCCGAGTTGCCACCCCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | GAAGAACAGGCACAGAGCCCCACCGACGGAGCCTCGTaGGCGGCTGACCAGAGTCACCCCCGTCTCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: EEQAQSPTDGAS*AADQSHPRLLH Trigger: GTGAAGGAGACGGGGGTGACTCTGGTCAGCCGCCCACGAGGCTCCGTCGGTGGGGCTCTGTGCCTGTTCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | TGTCCCGGAGCCGGTGGTGGGCAAAGGACCTGTGTCTaGAGGCTCGGCGGTAGAGGCACCACAGCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CPGAGGGQRTCV*RLGGRGTTAAG Trigger: TCCTGCTGCTGTGGTGCCTCTACCGCCGAGCCTCCAGACACAGGTCCTTTGCCCACCACCGGCTCCGGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | TGCAAGACTGGTTCATCTCCGCTGTCCCGGAGCCGGTaGTGGGCAAAGGACCTGTGTCTGGAGGCTCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: CKTGSSPLSRSR*WAKDLCLEARR Trigger: CCGCCGAGCCTCCAGACACAGGTCCTTTGCCCACCACCGGCTCCGGGACAGCGGAGATGAACCAGTCTTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS TCA 72 bp | AATCTGAGGTGGACAGGCCAGGGGTGGCAACTCGGGTaGCTGCAGGGGCTTCTGGGCTGGGACTCAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NLRWTGQGWQLG*LQGLLGWDSSL Trigger: CAGGCTTGAGTCCCAGCCCAGAAGCCCCTGCAGTCACCCGAGTTGCCACCCCTGGCCTGTCCACCTCAGATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | GGTGACTGCAGGGGCTTCTGGGCTGGGACTCAAGCCTaGCTCACTGGGAGTGGTGGCTTCCTCCCTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: GDCRGFWAGTQA*LTGSGGFLPEG Trigger: ACCTTCAGGGAGGAAGCCACCACTCCCAGTGAGCCAGGCTTGAGTCCCAGCCCAGAAGCCCCTGCAGTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | CTGGGAGTGGTGGCTTCCTCCCTGAAGGTTGTTGGCTaGGTGGGAAGACTAGAGCTGGGTTCCAAGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LGVVASSLKVVG*VGRLELGSKSE Trigger: CTCTGACTTGGAACCCAGCTCTAGTCTTCCCACCCAGCCAACAACCTTCAGGGAGGAAGCCACCACTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | CTCACTGGGAGTGGTGGCTTCCTCCCTGAAGGTTGTTaGCTGGGTGGGAAGACTAGAGCTGGGTTCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LTGSGGFLPEGC*LGGKTRAGFQV Trigger: GACTTGGAACCCAGCTCTAGTCTTCCCACCCAGCCAACAACCTTCAGGGAGGAAGCCACCACTCCCAGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | GGGTGGTTGGTTCCAGTGCAGAATTTAGGTGTCTCGTaGCACTGGGGTCGTAGGTCTCTAGGGATTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GWLVPVQNLGVS*HWGRRSLGIWS Trigger: GCTCCAAATCCCTAGAGACCTACGACCCCAGTGCCACGAGACACCTAAATTCTGCACTGGAACCAACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS CCA 72 bp | GGAAGAGGGATATCTGGCCCTTTAGGGTCTGAGTTCTaGGGTACGTGCAGCTCTTTGGTCCCTGGGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: GRGISGPLGSEF*GTCSSLVPGES Trigger: AGATTCCCCAGGGACCAAAGAGCTGCACGTACCCCAGAACTCAGACCCTAAAGGGCCAGATATCCCTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179443.3 |
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| CDS CCA 72 bp | GAGAGTCAGACGGGGAAATTCCAGTTGGGTCAGGTTTaGGGGTCTCAGAAGGTTTACCAAGTGTTGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ESQTGKFQLGQV*GSQKVYQVLLW Trigger: CCAGAGCAACACTTGGTAAACCTTCTGAGACCCCCAAACCTGACCCAACTGGAATTTCCCCGTCTGACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS CAA 72 bp | GGAGAGTCAGACGGGGAAATTCCAGTTGGGTCAGGTTaGGGGGTCTCAGAAGGTTTACCAAGTGTTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GESDGEIPVGSG*GVSEGLPSVAL Trigger: CAGAGCAACACTTGGTAAACCTTCTGAGACCCCCAAACCTGACCCAACTGGAATTTCCCCGTCTGACTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS CAA 72 bp | GGTCAGGTTTGGGGGTCTCAGAAGGTTTACCAAGTGTaGCTCTGGAGGGACTCATTTGTGAAGTACCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GQVWGSQKVYQV*LWRDSFVKYPE Trigger: CTCAGGGTACTTCACAAATGAGTCCCTCCAGAGCAACACTTGGTAAACCTTCTGAGACCCCCAAACCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS TCA 72 bp | TCAGGAGGATGGCTTGCAGAGGATCCTGGGGTAGGTTaGTCTCTAGTAAGATTTTCTAGAGTACCAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SGGWLAEDPGVG*SLVRFSRVPVG Trigger: GCCCACTGGTACTCTAGAAAATCTTACTAGAGATCAACCTACCCCAGGATCCTCTGCAAGCCATCCTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS TCA 72 bp | AACAGTGGGATTAGAGTTGTGAGTGGTGAGAAAGACTaGCTGTGGACTTTCTGTAGGGTCAGGGTGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: NSGIRVVSGEKD*LWTFCRVRVGG Trigger: ACCACCCACCCTGACCCTACAGAAAGTCCACAGTCAGTCTTTCTCACCACTCACAACTCTAATCCCACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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| CDS TCA 72 bp | GGGTCTGGGACTTGGTATCTTAGACTCTTCACCAGGTaGGAGTTTGGGGGTATCTCTTTTGGAGATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSGTWYLRLFTR*EFGGISFGDFR Trigger: CCTGAAATCTCCAAAAGAGATACCCCCAAACTCTCACCTGGTGAAGAGTCTAAGATACCAAGTCCCAGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179443.3 ENSMUST00000211004.2 |
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