Pregenerated sensors for GFRAL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059383Ensembl transcript IDs: ENSMUST00000074880.6, ENSMUST00000184693.8
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGCTAGGAAGGCAGCCCTaGAGCTCTCACTCCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQLGRQP*SSHSQN Trigger: GTTCTGGGAGTGAGAGCTGCAGGGCTGCCTTCCTAG...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS-3UTR GCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGGTAAAGGGCCAACTGTaGATTACAAACCACATCCCC | + |
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Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQVKGQL*ITNHIP Trigger: GGGGATGTGGTTTGTAATGCACAGTTGGCCCTTTAC...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR GCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGGAAGAACCGTATGGCTaGTTGGCAGTGTTTCACATC | + |
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Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQEEPYG*LAVFHI Trigger: GATGTGAAACACTGCCAAGCAGCCATACGGTTCTTC...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR TCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGTCATTTCGGCAAGTGTaGATTACACTGAGGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQSFRQV*ITLRQV Trigger: CACTTGCCTCAGTGTAATTCACACTTGCCGAAATGA...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGGATAGAAGAACCGTATaGCTGCTTGGCAGTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQDRRTV*LLGSVS Trigger: TGAAACACTGCCAAGCAGCCATACGGTTCTTCTATC...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR GCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGATTGATCTCCATGACTaGTCACAGCCATTTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQIDLHD*SQPFAS Trigger: TGATGCAAATGGCTGTGAGCAGTCATGGAGATCAAT...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR GCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAGAAGAACCGTATGGCTaGTTGGCAGTGTTTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVEEPYG*LAVFHI Trigger: GATGTGAAACACTGCCAAGCAGCCATACGGTTCTTC...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR GCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGTGGAACTATATTCAGTaGACATGGCTTGCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQWNYIQ*TWLAVK Trigger: CTTCACAGCAAGCCATGTGCACTGAATATAGTTCCA...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAACCGTATGGCTGCTTaGCAGTGTTTCACATCACAC | + |
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Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVNRMAA*QCFTSH Trigger: GTGTGATGTGAAACACTGCCAAGCAGCCATACGGTT...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTACAGGTCTCATCTTCATaGCACTTCCCAGTTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVQVSSS*HFPVMW Trigger: CCACATAACTGGGAAGTGCCATGAAGATGAGACCTG...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS-3UTR TCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGAAGACTGCATCTGTTTaGATCCATGATAGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQKTASV*IHDRKE Trigger: CTCCTTTCTATCATGGATTCAAACAGATGCAGTCTT...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR TCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTACAGGGTATATCAGATTaGGCACAGTCACAAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVQGISD*AQSQKA Trigger: GGCTTTTTGTGACTGTGCTCAATCTGATATACCCTG...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR TCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTATCATTTCGGCAAGTGTaGATTACACTGAGGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVSFRQV*ITLRQV Trigger: CACTTGCCTCAGTGTAATTCACACTTGCCGAAATGA...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR TCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGAAACACGATTTGCTATaGAGCATGTGCTGGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQKHDLL*SMCWKI Trigger: GATTTTCCAGCACATGCTTCATAGCAAATCGTGTTT...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS-3UTR GCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTATGTGCTGGAAAATCATaGACACGTGTTCTTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVCAGKS*TRVLQP Trigger: AGGCTGAAGAACACGTGTGCATGATTTTCCAGCACA...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGTTTTCCACCAAAGCCTaGATACTCAGGTTACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQFSTKA*ILRLQC Trigger: ACATTGTAACCTGAGTATCCAGGCTTTGGTGGAAAA...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAGATAGAAGAACCGTATaGCTGCTTGGCAGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVDRRTV*LLGSVS Trigger: TGAAACACTGCCAAGCAGCCATACGGTTCTTCTATC...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGTATATTCAGTGCACATaGCTTGCTGTGAAGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQYIQCT*LAVKSF Trigger: GAAACTCTTCACAGCAAGCCATGTGCACTGAATATA...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGTGTGAAGAGTTTCTTTaGATTGCTGACAGGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQCEEFL*IADRVY Trigger: ATATACCCTGTCAGCAATCCAAAGAAACTCTTCACA...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR GCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGGAGTTGGGTAATCTaGATAATTCATCATTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVRSWVI*IIHHFG Trigger: GCCGAAATGATGAATTATGCAGATTACCCAACTCCT...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGGCACAATCATTTGTTTaGGAAGAGGATTCATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQAQSFV*EEDSFS Trigger: AGAAAATGAATCCTCTTCCCAAACAAATGATTGTGC...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTATTTTCCACCAAAGCCTaGATACTCAGGTTACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVFSTKA*ILRLQC Trigger: ACATTGTAACCTGAGTATCCAGGCTTTGGTGGAAAA...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTATATATTCAGTGCACATaGCTTGCTGTGAAGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVYIQCT*LAVKSF Trigger: GAAACTCTTCACAGCAAGCCATGTGCACTGAATATA...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTATTGTTTACTGTACAGTaGAGGTCATCCATACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVLFTVQ*RSSIQR Trigger: TCTTTGTATGGATGACCTCCACTGTACAGTAAACAA...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAGCACAATCATTTGTTTaGGAAGAGGATTCATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVAQSFV*EEDSFS Trigger: AGAAAATGAATCCTCTTCCCAAACAAATGATTGTGC...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| 3UTR CAA 72 bp | ATCTTAAATTGCGTTATTGGCAAATGTAATTTTCCATaGGTTAGTCACACAGACATGTGGTTGGTAAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ILNCVIGKCNFP*VSHTDMWLVSD Trigger: ATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAACGCAATTTAAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS GCA 90 bp | AGGAAGGCAGCCCTGCAGCTCTCACTCCCAGAACAAGTAAGGTCTTaGTTGCCTAACATGCTAATGCAGGTCTCATCTTCATGGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: RKAALQLSLPEQVRS*LPNMLMQVSSSWHF Trigger: GAAGTGCCATGAAGATGAGACCTGCATTAGCATGTTAGGCAAGCAAGACCTTACTTGTTCTGGGAGTGAGAGCTGCAGGGCTGCCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS CCA 90 bp | GTAAGGTCTTGCTTGCCTAACATGCTAATGCAGGTCTCATCTTCATaGCACTTCCCAGTTATGTGGGGCCAGCATTCTGTCTGGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: VRSCLPNMLMQVSSS*HFPVMWGQHSVWNV Trigger: AACATTCCAGACAGAATGCTGGCCCCACATAACTGGGAAGTGCCATGAAGATGAGACCTGCATTAGCATGTTAGGCAAGCAAGACCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS-3UTR CAA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGGCAAGCACAGGGTACTaGCAGGACTGTCCCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQASTGY*QDCPKG Trigger: ACCTTTGGGACAGTCCTGCAAGTACCCTGTGCTTGC...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS-3UTR CAA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGGAACCGTATGGCTGCTaGGCAGTGTTTCACATCACA | + |
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Preference number: 5 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQEPYGC*AVFHIT Trigger: TGTGATGTGAAACACTGCCAAGCAGCCATACGGTTC...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS GCA 90 bp | GAGTCACCTGGAGTAAGGCAGGTGTCTTCCATTGATCTCCATGACTaGTCACAGCCATTTGCATCAATCAAGCATTTCTGTATTAAATGT | + |
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Preference number: 5 (lower is better) Translates to: ESPGVRQVSSIDLHD*SQPFASIKHFCIKC Trigger: ACATTTAATACAGAAATGCTTGATTGATGCAAATGGCTGTGAGCAGTCATGGAGATCAATGGAAGACACCTGCCTTACTCCAGGTGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAGGCAGGTGTCTTCCATaGATCTCCATGACTGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVGRCLP*ISMTAH Trigger: GTGAGCAGTCATGGAGATCAATGGAAGACACCTGCC...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS CCA 90 bp | GTGGAACTATATTCAGTGCACATGGCTTGCTGTGAAGAGTTTCTTTaGATTGCTGACAGGGTATATCAGATTGAGCACAGTCACAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: VELYSVHMACCEEFL*IADRVYQIEHSHKK Trigger: CTTTTTGTGACTGTGCTCAATCTGATATACCCTGTCAGCAATCCAAAGAAACTCTTCACAGCAAGCCATGTGCACTGAATATAGTTCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGACTGCTCACAGCCATTaGCATCAATCAAGCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQTAHSH*HQSSIS Trigger: AGAAATGCTTGATTGATGCAAATGGCTGTGAGCAGT...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGAGTGAATTATTTATCTaGCAGGAGTCACCTGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQSELFI*QESPGV Trigger: TACTCCAGGTGACTCCTGCAAGATAAATAATTCACT...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGAAGAGTTTCTTTGGATaGCTGACAGGGTATATCAGA | + |
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Preference number: 5 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQKSFFG*LTGYIR Trigger: TCTGATATACCCTGTCAGCAATCCAAAGAAACTCTT...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | TGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGATCTGCAGGTTAAAAGGCATATTTaGATAGAAGAACCGTATGGC | + |
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Preference number: 5 (lower is better) Translates to: CNFPLVSHTDMWLVSDLQVKRHI*IEEPYG Trigger: GCCATACGGTTCTTCTATCAAAATATGCCTTTTAAC...CTGCAGATCACTTACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAAGTGAATTATTTATCTaGCAGGAGTCACCTGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVSELFI*QESPGV Trigger: TACTCCAGGTGACTCCTGCAAGATAAATAATTCACT...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS CCA 90 bp | GCATCAATCAAGCATTTCTGTATTAAATGTGCACAATCATTTGTTTaGGAAGAGGATTCATTTTCTGAGCTTAACGTAACAGCCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: ASIKHFCIKCAQSFV*EEDSFSELNVTARK Trigger: TTTCCTGGCTGTTACGTTAAGCTCAGAAAATGAATCCTCTTCCCAAACAAATGATTGTGCACATTTAATACAGAAATGCTTGATTGATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTATGCACAATCATTTGTTaGGGAAGAGGATTCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVCTIIC*GRGFIF Trigger: GAAAATGAATCCTCTTCCCAAACAAATGATTGTGCA...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGGCAAATGTAATTTTCCATTGGTTAGTCACACAGACATGTGGTTGGTAGTTAAAAGGCATATTTaGATAGAAGAACCGTATGGC | + |
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Preference number: 5 (lower is better) Translates to: VIGKCNFPLVSHTDMWLVVKRHI*IEEPYG Trigger: GCCATACGGTTCTTCTATCAAAATATGCCTTTTAAC...TACCAACCACATGTCTGTGTGACTAACCAATGGAAAATTACATTTGCCAATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS GCA 72 bp | GCCCTGCAGCTCTCACTCCCAGAACAAGTAAGGTCTTaGTTGCCTAACATGCTAATGCAGGTCTCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ALQLSLPEQVRS*LPNMLMQVSSS Trigger: TGAAGATGAGACCTGCATTAGCATGTTAGGCAAGCAAGACCTTACTTGTTCTGGGAGTGAGAGCTGCAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS CCA 72 bp | TGCTTGCCTAACATGCTAATGCAGGTCTCATCTTCATaGCACTTCCCAGTTATGTGGGGCCAGCATTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CLPNMLMQVSSS*HFPVMWGQHSV Trigger: GACAGAATGCTGGCCCCACATAACTGGGAAGTGCCATGAAGATGAGACCTGCATTAGCATGTTAGGCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS CAA 72 bp | CTGCAGCTCTCACTCCCAGAACAAGTAAGGTCTTGCTaGCCTAACATGCTAATGCAGGTCTCATCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: LQLSLPEQVRSC*PNMLMQVSSSW Trigger: CCATGAAGATGAGACCTGCATTAGCATGTTAGGCAAGCAAGACCTTACTTGTTCTGGGAGTGAGAGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS GCA 72 bp | GCCAGCATTCTGTCTGGAATGTTCGGTAGTGTGTCCTaGATAATTCATCATTTCGGCAAGTGTGAATTACAC | + |
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Preference number: 6 (lower is better) Translates to: ASILSGMFGSVS*IIHHFGKCELH Trigger: GTGTAATTCACACTTGCCGAAATGATGAATTATGCAGGACACACTACCGAACATTCCAGACAGAATGCTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074880.6 |
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| CDS CAA 90 bp | ACAGTCACAAAAAGCCAACATCTGGGCAGTGTTAAAAGGCATATTTaGATAGAAGAACCGTATGGCTGCTTGGCAGTGTTTCACATCACA | + |
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Preference number: 6 (lower is better) Translates to: TVTKSQHLGSVKRHI*IEEPYGCLAVFHIT Trigger: TGTGATGTGAAACACTGCCAAGCAGCCATACGGTTCTTCTATCAAAATATGCCTTTTAACACTGCCCAGATGTTGGCTTTTTGTGACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS CAA 72 bp | AAAAGCCAACATCTGGGCAGTGTTAAAAGGCATATTTaGATAGAAGAACCGTATGGCTGCTTGGCAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KSQHLGSVKRHI*IEEPYGCLAVF Trigger: AAACACTGCCAAGCAGCCATACGGTTCTTCTATCAAAATATGCCTTTTAACACTGCCCAGATGTTGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS CAA 90 bp | AACTATATTCAGTGCACATGGCTTGCTGTGAAGAGTTTCTTTGGATaGCTGACAGGGTATATCAGATTGAGCACAGTCACAAAAAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: NYIQCTWLAVKSFFG*LTGYIRLSTVTKSQ Trigger: TTGGCTTTTTGTGACTGTGCTCAATCTGATATACCCTGTCAGCAATCCAAAGAAACTCTTCACAGCAAGCCATGTGCACTGAATATAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS CAA 72 bp | TGTCTTCCATTGATCTCCATGACTGCTCACAGCCATTaGCATCAATCAAGCATTTCTGTATTAAATGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: CLPLISMTAHSH*HQSSISVLNVH Trigger: GTGCACATTTAATACAGAAATGCTTGATTGATGCAAATGGCTGTGAGCAGTCATGGAGATCAATGGAAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS CAA 72 bp | AAAAGGCATATTTTGATAGAAGAACCGTATGGCTGCTaGGCAGTGTTTCACATCACACAGATTTCCATTTGC | + |
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Preference number: 6 (lower is better) Translates to: KRHILIEEPYGC*AVFHITQISIC Trigger: GCAAATGGAAATCTGTGTGATGTGAAACACTGCCAAGCAGCCATACGGTTCTTCTATCAAAATATGCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS GCA 72 bp | GTTAAAAGGCATATTTTGATAGAAGAACCGTATGGCTaGTTGGCAGTGTTTCACATCACACAGATTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: VKRHILIEEPYG*LAVFHITQISI Trigger: AATGGAAATCTGTGTGATGTGAAACACTGCCAAGCAGCCATACGGTTCTTCTATCAAAATATGCCTTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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| CDS CAA 72 bp | CAATCAAGCATTTCTGTATTAAATGTGCACAATCATTaGTTTGGGAAGAGGATTCATTTTCTGAGCTTAACG | + |
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Preference number: 6 (lower is better) Translates to: QSSISVLNVHNH*FGKRIHFLSLT Trigger: CGTTAAGCTCAGAAAATGAATCCTCTTCCCAAACAAATGATTGTGCACATTTAATACAGAAATGCTTGATTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074880.6 ENSMUST00000184693.8 |
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