Pregenerated sensors for GFRA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022103Ensembl transcript IDs: ENSMUST00000022699.10, ENSMUST00000227633.2, ENSMUST00000227697.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGAGGTGACAAGGTCCTTGTGGCTAGCCCTGCTCCTTGCTGACTaGAACTCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTGGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: EEVTRSLWLALLLAD*NSLRTLGQVPRVGS Trigger: GCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGAGTTTCAGTCAGCAAGGAGCAGGGCTAGCCACAAGGACCTTGTCACCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CCA 90 bp | TTGCTGACTGAAACTCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTaGGCAGCCGCAATTGTCCTTTCCCCAGTCCACACCAGGCACAGC | + |
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Preference number: 1 (lower is better) Translates to: LLTETLCEPLGRSPE*AAAIVLSPVHTRHS Trigger: GCTGTGCCTGGTGTGGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGAGTTTCAGTCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CCA 90 bp | AGGAGAGAGAAAGCAGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTaGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: RREKAETRRREKGQA*EPTRVFCTHVQLGC Trigger: ACACCCTAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCTGCTTTCTCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGATGTTTCCATTTTGTCAGGCGGGAGTTCGTATCTGGGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCVCVCV*MFPFCQAGVRIWVA Trigger: AGCAACCCAGATACGAACTCCCGCCTGACAAAATGGAAACATGCACACACACACACACACACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CCA 90 bp | CTTTTTGACTTCAAGATTCCTGGCATGAAGGAGGAAAGAGCATCTTaGAGCTGGTACCCAACCAAGGCTTGCTTGTTCCCCAAAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LFDFKIPGMKEERAS*SWYPTKACLFPKEA Trigger: AGCTTCTTTGGGGAACAAGCAAGCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATCTTGAAGTCAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCACAGCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCCAACCCCACCATGCTaGAGGCACCTCGGCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GHSPISPTGPELRGPGTFPTPPC*RHLGLE Trigger: CTCCAGGCCGAGGTGCCTGCAGCATGGTGGGGTTGG...AAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGCTGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCACTCTGGGCAGGCTTCTaGCTGCCCGCCTGCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: APSAQLDQSSGVLVPFFPLWAGF*LPACLS Trigger: AGACAAGCAGGCGGGCAGTCAGAAGCCTGCCCAGAG...TGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACAAAAAGAGCATCTTGGAGCTaGTACCCAACCAAGGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PRSTALLPKRDPPNGPTKRASWS*YPTKAC Trigger: GCAAGCCTTGGTTGGGTACCAGCTCCAAGATGCTCT...TTTTGTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR GCA 90 bp | GATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTGGTACCCAACCAAGGCGGGCAGGCTTCTGACTaGCCGCCTGCTTGTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: DSWHEGGKSILELVPNQGGQASD*PPACLF Trigger: AAACAGACAAGCAGGCGGGCAGTCAGAAGCCTGCCC...GCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCTCTCTGCGAACCCTTaGGCAGGTCCCCAGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRLSANP*AGPQSG Trigger: CCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGAG...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CAA 90 bp | CTAGGCCCCATAAGGGATAGGGATGGCAGCAAACCGTTTCCATCTTaGAAGCCAAGAGGAAGAGGTGACAAGGTCCTTGTGGCTAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LGPIRDRDGSKPFPS*KPRGRGDKVLVASP Trigger: AGGGCTAGCCACAAGGACCTTGTCACCTCTTCCTCTTGGCTTCAAAGATGGAAACGGTTTGCTGCCATCCCTATCCCTTATGGGGCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR CCA 90 bp | AGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACAGCAGGGTCTCATCTaGTCCAGAGAGAAAACACCA | + |
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Preference number: 2 (lower is better) Translates to: STFIGAWLRVNAIGSPRPQQGLI*SREKTP Trigger: TGGTGTTTTCTCTCTGGACCAGATGAGACCCTGCTG...TGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR CCA 90 bp | GATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTGGTACCCAACCAAGGCTCCAGAGAAGAAATTTaGGAGGAGAAAGGTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: DSWHEGGKSILELVPNQGSREEI*EEKGSE Trigger: CTCTGAACCTTTCTCCTCCCAAATTTCTTCTCTGGA...GCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCATTGAGCCCTCGGTGCTaGATGTCCCTTGTAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSMYRQCMNVSEMRREKALSPRC*MSLVGD Trigger: GTCCCCTACAAGGGACATCCAGCACCGAGGGCTCAA...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCAGAGAAGGGGCAAGCTTaGGAGCCCACCAGAGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SSMYRQCMNVSEMRREKAEKGQA*EPTRVF Trigger: GAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTC...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCAGCCTGCTTGTCTGTTTaGTTTAGAAAAACTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSMYRQCMNVSEMRREKAACLSV*FRKTSP Trigger: TGGAGAAGTTTTTCTAAACCAAACAGACAAGCAGGC...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CCA 72 bp | GAAACTCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTaGGCAGCCGCAATTGTCCTTTCCCCAGTCCACACC | + |
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Preference number: 3 (lower is better) Translates to: ETLCEPLGRSPE*AAAIVLSPVHT Trigger: GGTGTGGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGAGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCTCGTATCTGGGTTGCTaGAAGAACTTTCGTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLRTLGQVPRVGSRNCPFSYLGC*KNFRAG Trigger: CCCAGCACGAAAGTTCTTCAAGCAACCCAGATACGA...GAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CCA 72 bp | CGGGGCAACTCGCTTCCTAGTACGTTTATTGGAGCTTaGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RGNSLPSTFIGA*LRVNAIGSPRP Trigger: TGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGGAAGCGAGTTGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CCA 72 bp | AAAGCAGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTaGGAGCCCACCAGAGTGTTCTGTACACACGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: KAETRRREKGQA*EPTRVFCTHVQ Trigger: CTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| 3UTR CCA 72 bp | TTCAAGATTCCTGGCATGAAGGAGGAAAGAGCATCTTaGAGCTGGTACCCAACCAAGGCTTGCTTGTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: FKIPGMKEERAS*SWYPTKACLFP Trigger: GGGGAACAAGCAAGCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR TCA 72 bp | GTGTTTTTGCAAGGGGAGTGTGTGTGTGTGTGTGTGTaGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: VFLQGECVCVCV*ERERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACTCCCCTTGCAAAAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CCA 72 bp | ATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTaGTACCCAACCAAGGCTTGCTTGTTCCCCAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: IPGMKEERASWS*YPTKACLFPKE Trigger: TTCTTTGGGGAACAAGCAAGCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGATGTTTCCATTTTGTCAGGCGGGAGTTCGTATC | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*MFPFCQAGVRI Trigger: GATACGAACTCCCGCCTGACAAAATGGAAACATGCACACACACACACACACACACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | GGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCCCAGTCCACACCAGTGGCCAGCATGGTATTaGGATCCCGGCCTGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GQVPRVGSRNCPFPSPHQWPAWY*DPGLPG Trigger: GCCTGGCAGGCCGGGATCGCAATACCATGCTGGCCA...CTGGTGTGGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCCCAGTCCGGCACTTGCGGCGGTTaGAGCGTTCGGTGGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: NPWAGPQSGQPQLSFPQSGTCGG*SVRWER Trigger: TCTCTCCCACCGAACGCTGCAACCGCCGCAAGTGCC...GGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | GCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCACTCCCAACCCCACCATaGTGCAGGCACCTCGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: APSAQLDQSSGVLVPFFPLPTPP*CRHLGL Trigger: CAGGCCGAGGTGCCTGCAGCATGGTGGGGTTGGGAG...TGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACGGTTGCAGCGTTCGGTaGGAGAGATCTCGCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAPLNSPSPQERPAKWTHGCSVR*ERSRGC Trigger: GCAACCGCGAGATCTCTCCCACCGAACGCTGCAACC...GTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACAGGAGGCTCGACAGTTaGCGTGGAAGTCTGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PAPLNSPSPQERPAKWTHRRLDS*RGSLPG Trigger: GCCTGGCAGACTTCCACGCCAACTGTCGAGCCTCCT...GTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR TCA 90 bp | CCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACAAAAGGTTGCTCTTGGCACTaGCCACCGGGTCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PRSTALLPKRDPPNGPTKGCSWH*PPGLPL Trigger: CAGGGGCAGACCCGGTGGTCAGTGCCAAGAGCAACC...TTTTGTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGGGCCAACCCCACCATGCTaGAGGCACCTCGGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KGQAWEPTRVFCTHVQLGPTPPC*RHLGLE Trigger: CTCCAGGCCGAGGTGCCTGCAGCATGGTGGGGTTGG...CCCTAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| 3UTR CAA 72 bp | AACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATaGTCCTTTCCCCAGTCCACACCAGGCACAGCAACG | + |
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Preference number: 4 (lower is better) Translates to: NPWAGPQSGQPQ*SFPQSTPGTAT Trigger: CGTTGCTGTGCCTGGTGTGGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR TCA 90 bp | GAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTACCGCAGGGCAGCTGGTaGTTGTCCGGTAGGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EKGQAWEPTRVFCTHVQLPQGSW*LSGRRL Trigger: GAGCCTCCTACCGGACAATCACCAGCTGCCCTGCGG...TAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR GCA 90 bp | TATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACAGCCCCACGGCCTGCCAGGCACTaGCGAAGGGTGCGGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: YWSLVKSECNRESPATAPRPARH*RRVRYL Trigger: CAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCG...TGGGGCTGTGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGGGATTGCGATCCCGGCCTaGCAGGCACTGCCGAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KGQAWEPTRVFCTHVQLGIAIPA*QALPKG Trigger: ACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAAT...CCCTAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | GATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTGGTACCCAACCAAGGCTGGGGGCGCCAGCCGTaGAGCTCAGAGCCCTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: DSWHEGGKSILELVPNQGWGRQP*SSEPCG Trigger: TCCGCAGGGCTCTGAGCTCCACGGCTGGCGCCCCCA...GCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| 3UTR CAA 72 bp | CCCTGCTCCTTGCTGACTGAAACTCTCTGCGAACCCTaGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTC | + |
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Preference number: 4 (lower is better) Translates to: PCSLLTETLCEP*GRSPEWAAAIV Trigger: GACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGAGTTTCAGTCAGCAAGGAGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACCTTCCATGTTCCCACTaGCACGACAATTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PAPLNSPSPQERPAKWTHLPCSH*HDNCTR Trigger: CCTGGTGCAATTGTCGTGGCAGTGGGAACATGGAAG...GTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | CCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATCGCGGAGAGGAAGGGCTaGCCAAAGAGCGGAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PISPTGPELRGPGTFLPIAERKG*PKSGGF Trigger: AAACCCTCCGCTCTTTGGCCAGCCCTTCCTCTCCGC...GATGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | TCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCGATGCCCGTGGGGTTaGAGTCCACATAGTTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLRTLGQVPRVGSRNCPFRCPWG*SPHSSV Trigger: CACCGAACTATGTGGACTCCAACCCCACGGGCATCG...GAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCCCAGTCCTCTTCATGCCCCGCTTaGAGCGGCAGTCATACAATG | + |
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Preference number: 4 (lower is better) Translates to: NPWAGPQSGQPQLSFPQSSSCPA*SGSHTM Trigger: CATTGTATGACTGCCGCTGCAAGCGGGGCATGAAGA...GGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGGGAGACACCACGATaGCCGTGGGGTTGGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: REGASLGAHQSVLYTRPARETPR*PWGWSP Trigger: TGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCT...AGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | AGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCCCAGTCCACACCAGGCACGGTAGGTATACTCGCTaGGCACACGGTCGAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: RSPEWAAAIVLSPVHTRHGRYTR*AHGRRT Trigger: AGTTCTTCGACCGTGTGCCCAGCGAGTATACCTACC...GTGCCTGGTGTGGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | AGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCCCAGTCCACACCAGGCACTGCCAAAGGCTTGAATaGCATTCCGGAGGCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: RSPEWAAAIVLSPVHTRHCQRLE*HSGGMG Trigger: ACCCATGCCTCCGGAATGCCATTCAAGCCTTTGGCA...GTGCCTGGTGTGGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCCCAGTCCTCAGCCCCAGATGGATaGTCCAATAGATCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: NPWAGPQSGQPQLSFPQSSAPDG*SNRSAD Trigger: GTCTGCAGATCTATTGGAGCATCCATCTGGGGCTGA...GGACTGGGGAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | TCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCAGGAGCAGAAGAGCATaGGGTAGGTATACTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLRTLGQVPRVGSRNCPFRSRRA*GRYTRW Trigger: CCAGCGAGTATACCTACCGCATGCTCTTCTGCTCCT...GAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGGGCACTGCCACGACAATTaGACCAGGGAGACACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KGQAWEPTRVFCTHVQLGHCHDN*TRETPR Trigger: TCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTG...CCCTAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCGCGGCAGTCATACAATaGGCTTTCCTGCAAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRTLGQVPRVGSRNCPFAAVIQ*AFLQDL Trigger: GAGGTCTTGCAGGAAAGCCCATTGTATGACTGCCGC...GAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | GATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTGGTACCCAACCAAGGCAACAGCTGGGCAGGATaGTTTGCCGGCGACGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSWHEGGKSILELVPNQGNSWAG*FAGDAR Trigger: CCGAGCGTCGCCGGCAAACCATCCTGCCCAGCTGTT...GCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGGGGTGACAAGGTCCTTGTaGCTAGCCCTGCTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGQAWEPTRVFCTHVQLGVTRSL*LALLLA Trigger: AGCAAGGAGCAGGGCTAGCCACAAGGACCTTGTCAC...CCCTAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
||
| CDS-3UTR TCA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCGCAGGGCAGCTGGTaGTTGTCCGGTAGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRPQGSW*LSGRRL Trigger: GAGCCTCCTACCGGACAATCACCAGCTGCCCTGCGG...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR GCA 90 bp | CCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATCTTGGCCTTCAGCCCTTaGTCCTGGATAGATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PISPTGPELRGPGTFLPILAFSP*SWIDVQ Trigger: CTGCACATCTATCCAGGAGCAAGGGCTGAAGGCCAA...GATGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCACAGCAGGGTCTCATCTGGTCCAGAGAGAAAACACCAGTGAAGAGAAAACGGACACAGTCCACTTaGGGGCGCCAGCCGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPQQGLIWSREKTPVKRKRTQST*GRQPWS Trigger: GCTCCACGGCTGGCGCCCCCAAGTGGACTGTGTCCG...TTTTCTCTTCACTGGTGTTTTCTCTCTGGACCAGATGAGACCCTGCTGTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTGAAGGGTGCGGTACCTaGAGCTGCAGTTGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: REGASLGAHQSVLYTRPAEGCGT*SCSWIQ Trigger: CTGAATCCAACTGCAGCTCCAGGTACCGCACCCTTC...AGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTTCTCGCGGTTGCAGATaGAGATGTAGGAGGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: REGASLGAHQSVLYTRPASRGCR*RCRRSG Trigger: TCCGCTCCTCCTACATCTCCATCTGCAACCGCGAGA...AGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | TATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACAGCCCCAATAGGAGCCCAGACATaGCTGGTAGTTGTCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YWSLVKSECNRESPATAPIGAQT*LVVVRR Trigger: CCTGCGGACAACTACCAGGCATGTCTGGGCTCCTAT...TGGGGCTGTGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR GCA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGGTTGGCGTGGAAGTCTaGCAGGCGGGACCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRVGVEV*QAGPSH Trigger: GTGACTGGGTCCCGCCTGGCAGACTTCCACGCCAAC...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATACCCAACCAAGGCTTaGTTGTTCCCCAAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: APSAQLDQSSGVLVPFFPYPTKA*LFPKEA Trigger: AGCTTCTTTGGGGAACAAGCAAGCCTTGGTTGGGTA...TGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | CCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACAAAACCTGGCACTCCTTATTaGCCAGCATGGTATTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSTALLPKRDPPNGPTKPGTPY*PAWYCD Trigger: ATCGCAATACCATGCTGGCCAATAAGGAGTGCCAGG...TTTTGTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | AGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGCGATGCCCGTGGGGTTaGAGTCCACATAGTTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNKEKREGASLGAHQSVLRCPWG*SPHSSV Trigger: CACCGAACTATGTGGACTCCAACCCCACGGGCATCG...CAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | CCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATCGGCATTCCGGAGGCATaGGTTTTCTGTGAAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PISPTGPELRGPGTFLPIGIPEA*VFCEVL Trigger: AAGGACTTCACAGAAAACCCATGCCTCCGGAATGCC...GATGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | CCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATCACTCTTTGGAGTTGTTaGCCTTCAGCCCTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISPTGPELRGPGTFLPITLWSC*PSALAP Trigger: AGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGT...GATGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGAGCATCTTGGAGCTaGTACCCAACCAAGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: REGASLGAHQSVLYTRPARASWS*YPTKAC Trigger: GCAAGCCTTGGTTGGGTACCAGCTCCAAGATGCTCT...AGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR TCA 90 bp | AGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGGGCTGGTGCTATCACTaGGGTCATCTGGCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNKEKREGASLGAHQSVLGWCYH*GHLAVK Trigger: CTTCACTGCCAGATGACCTCAGTGATAGCACCAGCC...CAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR TCA 90 bp | CCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATCAACCGTTTCCATCTTTaGAGCCAAGAGGAAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PISPTGPELRGPGTFLPINRFHL*SQEEEV Trigger: CACCTCTTCCTCTTGGCTTCAAAGATGGAAACGGTT...GATGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR GCA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGAGGGAGACACCACGATaGCCGTGGGGTTGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRRETPR*PWGWSP Trigger: TGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCT...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | AGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGCCTTATTGGCCAGCATaGTATTGCGATCCCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNKEKREGASLGAHQSVLPYWPA*YCDPGL Trigger: CAGGCCGGGATCGCAATACCATGCTGGCCAATAAGG...CAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGAGGAGGCTCGACAGTTaGCGTGGAAGTCTGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRRRLDS*RGSLPG Trigger: GCCTGGCAGACTTCCACGCCAACTGTCGAGCCTCCT...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | GATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTGGTACCCAACCAAGGCACACCACGATGCCCGTaGGGTTGGAGTCCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSWHEGGKSILELVPNQGTPRCP*GWSPHS Trigger: ACTATGTGGACTCCAACCCCACGGGCATCGTGGTGT...GCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGCATGTTTCCATTTTGTCAGGCGGGAGTTCGTATCTGGGTAGATTGAAGCGAGCCTaGAGATGTCCGAGAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVHVSILSGGSSYLGRLKRA*RCPRGG Trigger: CCCGCCTCTCGGACATCTTCAGGCTCGCTTCAATCT...ACCCAGATACGAACTCCCGCCTGACAAAATGGAAACATGCACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | GATGGCAGCAAACCGTTTCCATCTTTGAAGCCAAGAGGAAGAGGTGACAAGGTCTACAATGGGCTTTCCTaGAAGACCTCCAGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSKPFPSLKPRGRGDKVYNGLS*KTSRAA Trigger: GGCGGCCCTGGAGGTCTTGCAGGAAAGCCCATTGTA...GACCTTGTCACCTCTTCCTCTTGGCTTCAAAGATGGAAACGGTTTGCTGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AGCAACGTTCCTTCCACAGCAGGGTCTCATCTGGTCCAGAGAGAAAACACCAGTATAGGAGCCCAGACATaGCTGGTAGTTGTCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNVPSTAGSHLVQRENTSIGAQT*LVVVRR Trigger: CCTGCGGACAACTACCAGGCATGTCTGGGCTCCTAT...ACTGGTGTTTTCTCTCTGGACCAGATGAGACCCTGCTGTGGAAGGAACGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | GATGGCAGCAAACCGTTTCCATCTTTGAAGCCAAGAGGAAGAGGTGACAAGGTCCCGCACACAGCTCATTaGCCCGGACACAGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: DGSKPFPSLKPRGRGDKVPHTAH*PGHSPL Trigger: AAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGG...GACCTTGTCACCTCTTCCTCTTGGCTTCAAAGATGGAAACGGTTTGCTGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | CAGCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATCTTTTTACTCCCTaGGCTGATATTTGTCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPHQPNWTRAQGSWYLSSHLFTP*ADICRE Trigger: CTCACGACAAATATCAGCCCAGGGAGTAAAAAGATG...GGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR TCA 90 bp | GATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTGGTACCCAACCAAGGCGGCTCTGCAGGAGCCTaGGTAAAGTTTGATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSWHEGGKSILELVPNQGGSAGA*VKFDHL Trigger: AAGGTGATCAAACTTTACTCAGGCTCCTGCAGAGCC...GCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR TCA 90 bp | AGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTTCAAGATTCCTGGCATaGAGGAGGAAAGAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: REGASLGAHQSVLYTRPASRFLA*RRKEHL Trigger: AAGATGCTCTTTCCTCCTTCATGCCAGGAATCTTGA...AGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR GCA 90 bp | AGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACACTGCCACGACAATTaGACCAGGGAGACACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: STFIGAWLRVNAIGSPRPHCHDN*TRETPR Trigger: TCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTG...TGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR GCA 90 bp | AGCAACGTTCCTTCCACAGCAGGGTCTCATCTGGTCCAGAGAGAAAACACCAGTCTTCCATGTTCCCACTaGCACGACAATTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNVPSTAGSHLVQRENTSLPCSH*HDNCTR Trigger: CCTGGTGCAATTGTCGTGGCAGTGGGAACATGGAAG...ACTGGTGTTTTCTCTCTGGACCAGATGAGACCCTGCTGTGGAAGGAACGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | AGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACTGACTGAAACTCTCTaGGAACCCTTGGGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STFIGAWLRVNAIGSPRPLTETL*EPLGRS Trigger: GGACCTGCCCAAGGGTTCGCAGAGAGTTTCAGTCAG...TGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | AGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGACTCTTTGGAGTTGTTaGCCTTCAGCCCTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNKEKREGASLGAHQSVLTLWSC*PSALAP Trigger: AGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGT...CAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAAGCCTGAGTAAAGTTTaGTCACCTTTTTACTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKGQAWEPTRVFCTHVQLSLSKV*SPFYSL Trigger: CAGGGAGTAAAAAGGTGATCAAACTTTACTCAGGCT...TAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGTGCCAAAGGCTTGAATaGCATTCCGGAGGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRCQRLE*HSGGMG Trigger: ACCCATGCCTCCGGAATGCCATTCAAGCCTTTGGCA...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | GATTCCTGGCATGAAGGAGGAAAGAGCATCTTGGAGCTGGTACCCAACCAAGGCACATGCTTAACTCTTTaGAGTTGTTGGCCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSWHEGGKSILELVPNQGTCLTL*SCWPSA Trigger: GGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGT...GCCTTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCCTTCATGCCAGGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| CDS-3UTR GCA 90 bp | AGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGACATGTTCACATCTGTaGCATTGCCAAAGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNKEKREGASLGAHQSVLTCSHL*HCQRLE Trigger: TTCAAGCCTTTGGCAATGGCACAGATGTGAACATGT...CAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCACCTCATAGGAACAGCTaGGCAGGATGGTTTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSMYRQCMNVSEMRREKAPHRNS*AGWFAG Trigger: GCCGGCAAACCATCCTGCCCAGCTGTTCCTATGAGG...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| CDS-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCAGGTCACCATCAGGAGTaGGAGGGCAGTCAAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSMYRQCMNVSEMRREKAGHHQE*EGSQGS Trigger: ACTGCCTTGACTGCCCTCCCACTCCTGATGGTGACC...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGCATGTTTCCATTTaGTCAGGCGGGAGTTCGTATCTGGGTTGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVHVSI*SGGSSYLGCLK Trigger: CTTCAAGCAACCCAGATACGAACTCCCGCCTGACAAAATGGAAACATGCACACACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| 3UTR CAA 72 bp | ATAAGGGATAGGGATGGCAGCAAACCGTTTCCATCTTaGAAGCCAAGAGGAAGAGGTGACAAGGTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IRDRDGSKPFPS*KPRGRGDKVLV Trigger: CACAAGGACCTTGTCACCTCTTCCTCTTGGCTTCAAAGATGGAAACGGTTTGCTGCCATCCCTATCCCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| CDS-3UTR GCA 90 bp | GATGGCAGCAAACCGTTTCCATCTTTGAAGCCAAGAGGAAGAGGTGACAAGGTCTCACATCTGTGCCATTaGCAAAGGCTTGAATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGSKPFPSLKPRGRGDKVSHLCH*QRLEWH Trigger: ATGCCATTCAAGCCTTTGGCAATGGCACAGATGTGA...GACCTTGTCACCTCTTCCTCTTGGCTTCAAAGATGGAAACGGTTTGCTGCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
||
| CDS-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCAACACCACGATGCCCGTaGGGTTGGAGTCCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSMYRQCMNVSEMRREKATPRCP*GWSPHS Trigger: ACTATGTGGACTCCAACCCCACGGGCATCGTGGTGT...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGACATGCTTAACTCTTTaGAGTTGTTGGCCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRTCLTL*SCWPSA Trigger: GGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGT...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGCATGTTTCCATTTTGTCAGGCGGGAGTTCGTATCTGGGTACATGTTCACATCTGTaGCATTGCCAAAGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVHVSILSGGSSYLGTCSHL*HCQRLE Trigger: TTCAAGCCTTTGGCAATGGCACAGATGTGAACATGT...ACCCAGATACGAACTCCCGCCTGACAAAATGGAAACATGCACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR GCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCATCGACAGTCTGGCTCTaGAGGAGCCTGAGTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSMYRQCMNVSEMRREKASTVWL*RSLSKV Trigger: AACTTTACTCAGGCTCCTGCAGAGCCAGACTGTCGA...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCAGGCATTCCGGAGGCATaGGTTTTCTGTGAAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSMYRQCMNVSEMRREKAGIPEA*VFCEVL Trigger: AAGGACTTCACAGAAAACCCATGCCTCCGGAATGCC...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR GCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCATCACATCTGTGCCATTaGCAAAGGCTTGAATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSMYRQCMNVSEMRREKASHLCH*QRLEWH Trigger: ATGCCATTCAAGCCTTTGGCAATGGCACAGATGTGA...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCACACCTTTTTACTCCCTaGGCTGATATTTGTCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSMYRQCMNVSEMRREKAHLFTP*ADICRE Trigger: CTCACGACAAATATCAGCCCAGGGAGTAAAAAGGTG...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 90 bp | TTGGATTCAGCCGCACACAGCTCATTGGCCCGGACACAGTCCACTTaGGGGCGCCAGCCGTGGAGCTCAGAGCCCTGCGGAGAGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDSAAHSSLARTQST*GRQPWSSEPCGEEG Trigger: CCCTTCCTCTCCGCAGGGCTCTGAGCTCCACGGCTGGCGCCCCCAAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 90 bp | TGCGGTACCTGGAGCTGCAGTTGGATTCAGCCGCACACAGCTCATTaGCCCGGACACAGTCCACTTGGGGGCGCCAGCCGTGGAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGTWSCSWIQPHTAH*PGHSPLGGASRGAQ Trigger: CTGAGCTCCACGGCTGGCGCCCCCAAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 90 bp | CGCCTGGCACTCCTTATTGGCCAGCATGGTATTGCGATCCCGGCCTaGCAGGCACTGCCGAAGGGTGCGGTACCTGGAGCTGCAGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLALLIGQHGIAIPA*QALPKGAVPGAAVG Trigger: TCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAATAAGGAGTGCCAGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 90 bp | GCTGGTGATTGTCCGGTAGGAGGCTCGACAGTTGGCGTGGAAGTCTaGCAGGCGGGACCGGCACAAGTGGTCTGTACGACACAGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGDCPVGGSTVGVEV*QAGPAQVVCTTQAA Trigger: CGCAGCCTGTGTCGTACAGACCACTTGTGCCGGTCCCGCCTGGCAGACTTCCACGCCAACTGTCGAGCCTCCTACCGGACAATCACCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS CCA 90 bp | GGCCTGCCAGGCACTGCCGAAGGGTGCGGTACCTGGAGCTGCAGTTaGATTCAGCCGCACACAGCTCATTGGCCCGGACACAGTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GLPGTAEGCGTWSCS*IQPHTAHWPGHSPL Trigger: AAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | GAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTACCGGACACAGTCCACTaGGGGGCGCCAGCCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EKGQAWEPTRVFCTHVQLPDTVH*GAPAVE Trigger: CTCCACGGCTGGCGCCCCCAAGTGGACTGTGTCCGG...TAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 90 bp | CCAGCATGGTATTGCGATCCCGGCCTGCCAGGCACTGCCGAAGGGTaGGGTACCTGGAGCTGCAGTTGGATTCAGCCGCACACAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PAWYCDPGLPGTAEG*GTWSCSWIQPHTAH Trigger: ATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAATACCATGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 90 bp | GGGGGCGCCAGCCGTGGAGCTCAGAGCCCTGCGGAGAGGAAGGGCTaGCCAAAGAGCGGAGGGTTTCGTCTAAAAAGAAGAAGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGASRGAQSPAERKG*PKSGGFRLKRRRGR Trigger: TCTGCCTCTTCTTCTTTTTAGACGAAACCCTCCGCTCTTTGGCCAGCCCTTCCTCTCCGCAGGGCTCTGAGCTCCACGGCTGGCGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | CAGCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCGCCGCACACAGCTCATaGGCCCGGACACAGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QPHQPNWTRAQGSWYLSSAAHSS*ARTQST Trigger: AGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGC...GGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | TCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCTTGGCCAGCATGGTATaGCGATCCCGGCCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRTLGQVPRVGSRNCPFLASMV*RSRPAR Trigger: CCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAA...GAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | GGCCACAGCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCCACTGCCACGACAATaGCACCAGGGAGACACCACG | + |
|
Preference number: 5 (lower is better) Translates to: GHSPISPTGPELRGPGTFPLPRQ*HQGDTT Trigger: CGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGG...AAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGCTGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS GCA 90 bp | TCCTTATTGGCCAGCATGGTATTGCGATCCCGGCCTGCCAGGCACTaGCGAAGGGTGCGGTACCTGGAGCTGCAGTTGGATTCAGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLASMVLRSRPARH*RRVRYLELQLDSAA Trigger: TGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAATAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS TCA 90 bp | CATAGGAGCCCAGACATGCCTGGTAGTTGTCCGCAGGGCAGCTGGTaGTTGTCCGGTAGGAGGCTCGACAGTTGGCGTGGAAGTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRSPDMPGSCPQGSW*LSGRRLDSWRGSLP Trigger: TGGCAGACTTCCACGCCAACTGTCGAGCCTCCTACCGGACAATCACCAGCTGCCCTGCGGACAACTACCAGGCATGTCTGGGCTCCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS-3UTR CAA 90 bp | CCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACAAAAAGGCAGTGGTTGCTCTaGGCACTGACCACCGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSTALLPKRDPPNGPTKRQWLL*ALTTGS Trigger: AGACCCGGTGGTCAGTGCCAAGAGCAACCACTGCCT...TTTTGTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 90 bp | TGCGGCGGTTGCAGCGTTCGGTGGGAGAGATCTCGCGGTTGCAGATaGAGATGTAGGAGGAGCGGAGCTTCTTGCAGTTGTCGTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CGGCSVRWERSRGCR*RCRRSGASCSCRSG Trigger: ACCTGAACGACAACTGCAAGAAGCTCCGCTCCTCCTACATCTCCATCTGCAACCGCGAGATCTCTCCCACCGAACGCTGCAACCGCCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS-3UTR CAA 90 bp | GGCCACAGCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCGCAGGTCCAAGCAATaGGGCTTCTCTTTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GHSPISPTGPELRGPGTFRRSKQ*GFSLSS Trigger: TGAGGACAAAGAGAAGCCCAATTGCTTGGACCTGCG...AAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGCTGTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | GCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCAGTTGGCCTTCAGCCCTaGCTCCTGGATAGATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: APSAQLDQSSGVLVPFFPVGLQP*LLDRCA Trigger: TGCACATCTATCCAGGAGCAAGGGCTGAAGGCCAAC...TGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | TTCCCCAAAGAAGCTTCGTCCTGTAACAGCTCCCAACCCCACCATGCTGCAGGCCGGAGCTTCTTGCAGTaGTCGTTCAGGTTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPKEASSCNSSQPHHAAGRSFLQ*SFRLQA Trigger: GGCCTGCAACCTGAACGACAACTGCAAGAAGCTCCG...GCCTGCAGCATGGTGGGGTTGGGAGCTGTTACAGGACGAAGCTTCTTTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | CCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCATCGCCATTGCCAAAGGCTaGAATGGCATTCCGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PISPTGPELRGPGTFLPIAIAKG*NGIPEA Trigger: TGCCTCCGGAATGCCATTCAAGCCTTTGGCAATGGC...GATGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | GCCCCATCAGCCCAACTGGACCAGAGCTCAGGGGTCCTGGTACCTTTCTTCCCAAACTCTTTGGAGTTGTaGGCCTTCAGCCCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: APSAQLDQSSGVLVPFFPNSLEL*AFSPCS Trigger: GGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTT...TGGGAAGAAAGGTACCAGGACCCCTGAGCTCTGGTCCAGTTGGGCTGATGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS GCA 90 bp | GCGAAGCTTCGTAGAACTCCTCACCCTCCGTCAGCCCCAGATGGATaGTCCAATAGATCTGCAGACACTGCAGCTCCTTCTTCATGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AKLRRTPHPPSAPDG*SNRSADTAAPSSCP Trigger: GGGGCATGAAGAAGGAGCTGCAGTGTCTGCAGATCTATTGGAGCATCCATCTGGGGCTGACGGAGGGTGAGGAGTTCTACGAAGCTTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | AGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTGCCTGGCACTCCTTATaGGCCAGCATGGTATTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: REGASLGAHQSVLYTRPAAWHSL*ASMVLR Trigger: TCGCAATACCATGCTGGCCAATAAGGAGTGCCAGGC...AGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | AGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGCAGTTGTCGTTCAGGTaGCAGGCCTTGGCGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RNKEKREGASLGAHQSVLQLSFR*QALAAS Trigger: GGATGCCGCCAAGGCCTGCAACCTGAACGACAACTG...CAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | GAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGCCATTGCCAAAGGCTaGAATGGCATTCCGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EKGQAWEPTRVFCTHVQLAIAKG*NGIPEA Trigger: TGCCTCCGGAATGCCATTCAAGCCTTTGGCAATGGC...TAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCGAACCCTTGGGCAGGTCCCCAGAGTGGGCAGCCGCAATTGTCCTTTCCTTAACTCTTTGGAGTaGTTGGCCTTCAGCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRTLGQVPRVGSRNCPFLNSLE*LAFSPC Trigger: GCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAG...GAAAGGACAATTGCGGCTGCCCACTCTGGGGACCTGCCCAAGGGTTCGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 90 bp | CGGTGTCATATCAAACCCAATCATGCCAGCATAGGAGCCCAGACATaGCTGGTAGTTGTCCGCAGGGCAGCTGGTGATTGTCCGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RCHIKPNHASIGAQT*LVVVRRAAGDCPVG Trigger: TCCTACCGGACAATCACCAGCTGCCCTGCGGACAACTACCAGGCATGTCTGGGCTCCTATGCTGGCATGATTGGGTTTGATATGACACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS GCA 90 bp | CCATGTTCCCACTGCCACGACAATTGCACCAGGGAGACACCACGATaGCCGTGGGGTTGGAGTCCACATAGTTCGGTGTCATATCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: PCSHCHDNCTRETPR*PWGWSPHSSVSYQT Trigger: GGTTTGATATGACACCGAACTATGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGGGAACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS GCA 90 bp | GGAACTTCTCACACTCTTCTTCCATGTTCCCACTGCCACGACAATTaGACCAGGGAGACACCACGATGCCCGTGGGGTTGGAGTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GTSHTLLPCSHCHDN*TRETPRCPWGWSPH Trigger: ATGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGGGAACATGGAAGAAGAGTGTGAGAAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS-3UTR CAA 90 bp | CTTCCACAGCAGGGTCTCATCTGGTCCAGAGAGAAAACACCAGTGAAGAGAAAATGGCACTTGCGGCGGTaGCAGCGTTCGGTGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPQQGLIWSREKTPVKRKWHLRR*QRSVGE Trigger: CTCTCCCACCGAACGCTGCAACCGCCGCAAGTGCCA...TTTTCTCTTCACTGGTGTTTTCTCTCTGGACCAGATGAGACCCTGCTGTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | GAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGTACACACGTCCAGCTAGGAGGAAAGAGCATCTaGGAGCTGGTACCCAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: EKGQAWEPTRVFCTHVQLGGKSI*ELVPNQ Trigger: TTGGTTGGGTACCAGCTCCAAGATGCTCTTTCCTCC...TAGCTGGACGTGTGTACAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS CCA 90 bp | GGCACAAGTGGTCTGTACGACACAGGCTGCGCAGGTCCAAGCAATTaGGCTTCTCTTTGTCCTCATAGGAACAGCTGGGCAGGATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GTSGLYDTGCAGPSN*ASLCPHRNSWAGWF Trigger: AAACCATCCTGCCCAGCTGTTCCTATGAGGACAAAGAGAAGCCCAATTGCTTGGACCTGCGCAGCCTGTGTCGTACAGACCACTTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS CCA 90 bp | TGCCACGACAATTGCACCAGGGAGACACCACGATGCCCGTGGGGTTaGAGTCCACATAGTTCGGTGTCATATCAAACCCAATCATGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CHDNCTRETPRCPWG*SPHSSVSYQTQSCQ Trigger: CTGGCATGATTGGGTTTGATATGACACCGAACTATGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CCA 90 bp | TCCCACTGCCACGACAATTGCACCAGGGAGACACCACGATGCCCGTaGGGTTGGAGTCCACATAGTTCGGTGTCATATCAAACCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SHCHDNCTRETPRCP*GWSPHSSVSYQTQS Trigger: TGATTGGGTTTGATATGACACCGAACTATGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS-3UTR CAA 90 bp | TCCAGTATGTACAGACAGTGCATGAATGTCTCAGAAATGAGGAGAGAGAAAGCAGCTGGGCAGGATGGTTaGCCGGCGACGCTCGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSMYRQCMNVSEMRREKAAGQDG*PATLGA Trigger: TGCGCCGAGCGTCGCCGGCAAACCATCCTGCCCAGC...TGCTTTCTCTCTCCTCATTTCTGAGACATTCATGCACTGTCTGTACATACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS-3UTR CAA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACTGCCACGACAATaGCACCAGGGAGACACCACG | + |
|
Preference number: 5 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRPLPRQ*HQGDTT Trigger: CGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGG...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | AGAAACAAGGAGAAGAGAGAAGGGGCAAGCTTGGGAGCCCACCAGAGTGTTCTGAACTCTTTGGAGTTGTaGGCCTTCAGCCCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNKEKREGASLGAHQSVLNSLEL*AFSPCS Trigger: GGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTT...CAGAACACTCTGGTGGGCTCCCAAGCTTGCCCCTTCTCTCTTCTCCTTGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | TATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACAGCCCCACTTAACTCTTTGGAGTaGTTGGCCTTCAGCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YWSLVKSECNRESPATAPLNSLE*LAFSPC Trigger: GCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAG...TGGGGCTGTGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | AGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCAAGTGGGCAGCCGCAATaGTCCTTTCCCCAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: STFIGAWLRVNAIGSPRPSGQPQ*SFPQST Trigger: TGTGGACTGGGGAAAGGACAATTGCGGCTGCCCACT...TGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | CCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACAAAAAAACCGTTTCCATCTTaGAAGCCAAGAGGAAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRSTALLPKRDPPNGPTKKPFPS*KPRGRG Trigger: ACCTCTTCCTCTTGGCTTCAAAGATGGAAACGGTTT...TTTTGTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | CCCCGCTCAACAGCCCTTCTCCCCAAGAGAGACCCGCCAAATGGACCCACAAAATTTTCTGTGAAGTCCTaGAGGAACTTCTCACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSTALLPKRDPPNGPTKFSVKS*RNFSHS Trigger: AGAGTGTGAGAAGTTCCTCAAGGACTTCACAGAAAA...TTTTGTGGGTCCATTTGGCGGGTCTCTCTTGGGGAGAAGGGCTGTTGAGCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | AGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCAGTTGGCCTTCAGCCCTaGCTCCTGGATAGATGTGCA | + |
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Preference number: 5 (lower is better) Translates to: STFIGAWLRVNAIGSPRPVGLQP*LLDRCA Trigger: TGCACATCTATCCAGGAGCAAGGGCTGAAGGCCAAC...TGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS TCA 90 bp | TGGGAGGGCAGTCAAGGCAGTCGACAGTCTGGCTCTGCAGGAGCCTaGGTAAAGTTTGATCACCTTTTTACTCCCTGGGCTGATATTTGT | + |
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Preference number: 5 (lower is better) Translates to: WEGSQGSRQSGSAGA*VKFDHLFTPWADIC Trigger: ACAAATATCAGCCCAGGGAGTAAAAAGGTGATCAAACTTTACTCAGGCTCCTGCAGAGCCAGACTGTCGACTGCCTTGACTGCCCTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS-3UTR CAA 90 bp | TATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCCACAGCCCCATTTTCTGTGAAGTCCTaGAGGAACTTCTCACACTCT | + |
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Preference number: 5 (lower is better) Translates to: YWSLVKSECNRESPATAPFSVKS*RNFSHS Trigger: AGAGTGTGAGAAGTTCCTCAAGGACTTCACAGAAAA...TGGGGCTGTGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS-3UTR CAA 90 bp | CCTAGTACGTTTATTGGAGCTTGGTTAAGAGTGAATGCAATCGGGAGTCCCCGGCACATGCTTAACTCTTaGGAGTTGTTGGCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSTFIGAWLRVNAIGSPRHMLNS*ELLAFS Trigger: GCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTG...CCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAACGTACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 |
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| CDS CCA 72 bp | GCCGCACACAGCTCATTGGCCCGGACACAGTCCACTTaGGGGCGCCAGCCGTGGAGCTCAGAGCCCTGCGGA | + |
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Preference number: 6 (lower is better) Translates to: AAHSSLARTQST*GRQPWSSEPCG Trigger: TCCGCAGGGCTCTGAGCTCCACGGCTGGCGCCCCCAAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CAA 90 bp | GTTGGATTCAGCCGCACACAGCTCATTGGCCCGGACACAGTCCACTaGGGGGCGCCAGCCGTGGAGCTCAGAGCCCTGCGGAGAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VGFSRTQLIGPDTVH*GAPAVELRALRRGR Trigger: CCTTCCTCTCCGCAGGGCTCTGAGCTCCACGGCTGGCGCCCCCAAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 72 bp | CCTCCAGGGCCGCCTGGCACTCCTTATTGGCCAGCATaGTATTGCGATCCCGGCCTGCCAGGCACTGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: PPGPPGTPYWPA*YCDPGLPGTAE Trigger: TTCGGCAGTGCCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAATAAGGAGTGCCAGGCGGCCCTGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 72 bp | CCTGCAAGACCTCCAGGGCCGCCTGGCACTCCTTATTaGCCAGCATGGTATTGCGATCCCGGCCTGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PARPPGPPGTPY*PAWYCDPGLPG Trigger: GCCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAATAAGGAGTGCCAGGCGGCCCTGGAGGTCTTGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CAA 72 bp | CTGGAGCTGCAGTTGGATTCAGCCGCACACAGCTCATaGGCCCGGACACAGTCCACTTGGGGGCGCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: LELQLDSAAHSS*ARTQSTWGRQP Trigger: CGGCTGGCGCCCCCAAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CAA 72 bp | AGGGCCGCCTGGCACTCCTTATTGGCCAGCATGGTATaGCGATCCCGGCCTGCCAGGCACTGCCGAAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RAAWHSLLASMV*RSRPARHCRRV Trigger: CACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAATAAGGAGTGCCAGGCGGCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CAA 90 bp | GTGCGGTACCTGGAGCTGCAGTTGGATTCAGCCGCACACAGCTCATaGGCCCGGACACAGTCCACTTGGGGGCGCCAGCCGTGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VRYLELQLDSAAHSS*ARTQSTWGRQPWSS Trigger: TGAGCTCCACGGCTGGCGCCCCCAAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CAA 90 bp | CGGCCTGCCAGGCACTGCCGAAGGGTGCGGTACCTGGAGCTGCAGTaGGATTCAGCCGCACACAGCTCATTGGCCCGGACACAGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RPARHCRRVRYLELQ*DSAAHSSLARTQST Trigger: AGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 72 bp | CTGCCAGGCACTGCCGAAGGGTGCGGTACCTGGAGCTaGAGTTGGATTCAGCCGCACACAGCTCATTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LPGTAEGCGTWS*SWIQPHTAHWP Trigger: GGGCCAATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 72 bp | TATTGCGATCCCGGCCTGCCAGGCACTGCCGAAGGGTaGGGTACCTGGAGCTGCAGTTGGATTCAGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: YCDPGLPGTAEG*GTWSCSWIQPH Trigger: GTGCGGCTGAATCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 72 bp | GCCAGCATGGTATTGCGATCCCGGCCTGCCAGGCACTaGCGAAGGGTGCGGTACCTGGAGCTGCAGTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ASMVLRSRPARH*RRVRYLELQLD Trigger: ATCCAACTGCAGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAATACCATGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 72 bp | TGGAGCTGCAGTTGGATTCAGCCGCACACAGCTCATTaGCCCGGACACAGTCCACTTGGGGGCGCCAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: WSCSWIQPHTAH*PGHSPLGGASR Trigger: ACGGCTGGCGCCCCCAAGTGGACTGTGTCCGGGCCAATGAGCTGTGTGCGGCTGAATCCAACTGCAGCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CAA 72 bp | TCCTGCAAGACCTCCAGGGCCGCCTGGCACTCCTTATaGGCCAGCATGGTATTGCGATCCCGGCCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCKTSRAAWHSL*ASMVLRSRPAR Trigger: CCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAATAAGGAGTGCCAGGCGGCCCTGGAGGTCTTGCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 72 bp | CTCCTTATTGGCCAGCATGGTATTGCGATCCCGGCCTaGCAGGCACTGCCGAAGGGTGCGGTACCTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLIGQHGIAIPA*QALPKGAVPGA Trigger: AGCTCCAGGTACCGCACCCTTCGGCAGTGCCTGGCAGGCCGGGATCGCAATACCATGCTGGCCAATAAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS GCA 72 bp | TGTCCGGTAGGAGGCTCGACAGTTGGCGTGGAAGTCTaGCAGGCGGGACCGGCACAAGTGGTCTGTACGACA | + |
|
Preference number: 6 (lower is better) Translates to: CPVGGSTVGVEV*QAGPAQVVCTT Trigger: TGTCGTACAGACCACTTGTGCCGGTCCCGCCTGGCAGACTTCCACGCCAACTGTCGAGCCTCCTACCGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS TCA 72 bp | CCAGACATGCCTGGTAGTTGTCCGCAGGGCAGCTGGTaGTTGTCCGGTAGGAGGCTCGACAGTTGGCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PDMPGSCPQGSW*LSGRRLDSWRG Trigger: TCCACGCCAACTGTCGAGCCTCCTACCGGACAATCACCAGCTGCCCTGCGGACAACTACCAGGCATGTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS GCA 72 bp | CGGCGCATGCCTGGTCCTGACAGGAGCAGAAGAGCATaGGGTAGGTATACTCGCTGGGCACACGGTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRMPGPDRSRRA*GRYTRWAHGRR Trigger: TCTTCGACCGTGTGCCCAGCGAGTATACCTACCGCATGCTCTTCTGCTCCTGTCAGGACCAGGCATGCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS CCA 72 bp | GCTTCTCTTTGTCCTCATAGGAACAGCTGGGCAGGATaGTTTGCCGGCGACGCTCGGCGCATGCCTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLCPHRNSWAG*FAGDARRMPGP Trigger: AGGACCAGGCATGCGCCGAGCGTCGCCGGCAAACCATCCTGCCCAGCTGTTCCTATGAGGACAAAGAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS CAA 72 bp | CTCTTTGTCCTCATAGGAACAGCTGGGCAGGATGGTTaGCCGGCGACGCTCGGCGCATGCCTGGTCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: LFVLIGTAGQDG*PATLGACLVLT Trigger: TGTCAGGACCAGGCATGCGCCGAGCGTCGCCGGCAAACCATCCTGCCCAGCTGTTCCTATGAGGACAAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS TCA 72 bp | GGTCTGCCCCTGTCCCTGAGAAGATTGAAGCGAGCCTaGAGATGTCCGAGAGGCGGGAGGTCACAGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GLPLSLRRLKRA*RCPRGGRSQAH Trigger: ATGAGCCTGTGACCTCCCGCCTCTCGGACATCTTCAGGCTCGCTTCAATCTTCTCAGGGACAGGGGCAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS TCA 72 bp | CCTTGGCGGCATCCAGGCAGTGGTTGCTCTTGGCACTaGCCACCGGGTCTGCCCCTGTCCCTAAAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PWRHPGSGCSWH*PPGLPLSLKRR Trigger: TCTTCTTTTTAGGGACAGGGGCAGACCCGGTGGTCAGTGCCAAGAGCAACCACTGCCTGGATGCCGCCAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227697.2 |
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| CDS GCA 72 bp | CACTGCCACGACAATTGCACCAGGGAGACACCACGATaGCCGTGGGGTTGGAGTCCACATAGTTCGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: HCHDNCTRETPR*PWGWSPHSSVS Trigger: TGACACCGAACTATGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS GCA 72 bp | CACACTCTTCTTCCATGTTCCCACTGCCACGACAATTaGACCAGGGAGACACCACGATGCCCGTGGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: HTLLPCSHCHDN*TRETPRCPWGW Trigger: CCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGGGAACATGGAAGAAGAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CCA 72 bp | AGCCGTGGAGCTCAGAGCCCTGCGGAGAGGAAGGGCTaGCCAAAGAGCGGAGGGTTTCGTCTAAAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRGAQSPAERKG*PKSGGFRLKRR Trigger: TCTTCTTTTTAGACGAAACCCTCCGCTCTTTGGCCAGCCCTTCCTCTCCGCAGGGCTCTGAGCTCCACGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022699.10 |
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| CDS CCA 72 bp | TGCAGCGTTCGGTGGGAGAGATCTCGCGGTTGCAGATaGAGATGTAGGAGGAGCGGAGCTTCTTGCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSVRWERSRGCR*RCRRSGASCSC Trigger: ACAACTGCAAGAAGCTCCGCTCCTCCTACATCTCCATCTGCAACCGCGAGATCTCTCCCACCGAACGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS CAA 72 bp | TCACACTCTTCTTCCATGTTCCCACTGCCACGACAATaGCACCAGGGAGACACCACGATGCCCGTGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SHSSSMFPLPRQ*HQGDTTMPVGL Trigger: CAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGGGAACATGGAAGAAGAGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CAA 90 bp | AGGAACTTCTCACACTCTTCTTCCATGTTCCCACTGCCACGACAATaGCACCAGGGAGACACCACGATGCCCGTGGGGTTGGAGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RNFSHSSSMFPLPRQ*HQGDTTMPVGLEST Trigger: TGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTGGCAGTGGGAACATGGAAGAAGAGTGTGAGAAGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CCA 72 bp | GGTCTGTACGACACAGGCTGCGCAGGTCCAAGCAATTaGGCTTCTCTTTGTCCTCATAGGAACAGCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLYDTGCAGPSN*ASLCPHRNSWA Trigger: TGCCCAGCTGTTCCTATGAGGACAAAGAGAAGCCCAATTGCTTGGACCTGCGCAGCCTGTGTCGTACAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS GCA 72 bp | ATCAAACCCAATCATGCCAGCATAGGAGCCCAGACATaGCTGGTAGTTGTCCGCAGGGCAGCTGGTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: IKPNHASIGAQT*LVVVRRAAGDC Trigger: ACAATCACCAGCTGCCCTGCGGACAACTACCAGGCATGTCTGGGCTCCTATGCTGGCATGATTGGGTTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS GCA 72 bp | TGGGGCCTTTGGGAGACATGTTCACATCTGTGCCATTaGCAAAGGCTTGAATGGCATTCCGGAGGCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: WGLWETCSHLCH*QRLEWHSGGMG Trigger: ACCCATGCCTCCGGAATGCCATTCAAGCCTTTGGCAATGGCACAGATGTGAACATGTCTCCCAAAGGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CCA 72 bp | CACGACAATTGCACCAGGGAGACACCACGATGCCCGTaGGGTTGGAGTCCACATAGTTCGGTGTCATATCAA | + |
|
Preference number: 6 (lower is better) Translates to: HDNCTRETPRCP*GWSPHSSVSYQ Trigger: TTGATATGACACCGAACTATGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATTGTCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CCA 72 bp | AATTGCACCAGGGAGACACCACGATGCCCGTGGGGTTaGAGTCCACATAGTTCGGTGTCATATCAAACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: NCTRETPRCPWG*SPHSSVSYQTQ Trigger: TTGGGTTTGATATGACACCGAACTATGTGGACTCCAACCCCACGGGCATCGTGGTGTCTCCCTGGTGCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS TCA 72 bp | AGTCAAGGCAGTCGACAGTCTGGCTCTGCAGGAGCCTaGGTAAAGTTTGATCACCTTTTTACTCCCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQGSRQSGSAGA*VKFDHLFTPWA Trigger: AGCCCAGGGAGTAAAAAGGTGATCAAACTTTACTCAGGCTCCTGCAGAGCCAGACTGTCGACTGCCTTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022699.10 ENSMUST00000227697.2 |
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| CDS CAA 90 bp | TTTGTCGTGAGCTCTGTGAAACACATGCTTAACTCTTTGGAGTTGTaGGCCTTCAGCCCTTGCTCCTGGATAGATGTGCAGGTGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: FVVSSVKHMLNSLEL*AFSPCSWIDVQVVM Trigger: CATCACCACCTGCACATCTATCCAGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTGTTTCACAGAGCTCACGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CAA 90 bp | GGGCTGATATTTGTCGTGAGCTCTGTGAAACACATGCTTAACTCTTaGGAGTTGTTGGCCTTCAGCCCTTGCTCCTGGATAGATGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLIFVVSSVKHMLNS*ELLAFSPCSWIDVQ Trigger: CTGCACATCTATCCAGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTGTTTCACAGAGCTCACGACAAATATCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CAA 72 bp | ATGGCATTCCGGAGGCATGGGTTTTCTGTGAAGTCCTaGAGGAACTTCTCACACTCTTCTTCCATGTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MAFRRHGFSVKS*RNFSHSSSMFP Trigger: TGGGAACATGGAAGAAGAGTGTGAGAAGTTCCTCAAGGACTTCACAGAAAACCCATGCCTCCGGAATGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CAA 72 bp | AGCTCTGTGAAACACATGCTTAACTCTTTGGAGTTGTaGGCCTTCAGCCCTTGCTCCTGGATAGATGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSVKHMLNSLEL*AFSPCSWIDVQ Trigger: CTGCACATCTATCCAGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTGTTTCACAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CAA 72 bp | GTGAGCTCTGTGAAACACATGCTTAACTCTTTGGAGTaGTTGGCCTTCAGCCCTTGCTCCTGGATAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSVKHMLNSLE*LAFSPCSWIDV Trigger: CACATCTATCCAGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTGTTTCACAGAGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CAA 90 bp | ATATTTGTCGTGAGCTCTGTGAAACACATGCTTAACTCTTTGGAGTaGTTGGCCTTCAGCCCTTGCTCCTGGATAGATGTGCAGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IFVVSSVKHMLNSLE*LAFSPCSWIDVQVV Trigger: CACCACCTGCACATCTATCCAGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTGTTTCACAGAGCTCACGACAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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| CDS CAA 72 bp | TTTGTCGTGAGCTCTGTGAAACACATGCTTAACTCTTaGGAGTTGTTGGCCTTCAGCCCTTGCTCCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: FVVSSVKHMLNS*ELLAFSPCSWI Trigger: TATCCAGGAGCAAGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTGTTTCACAGAGCTCACGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022699.10 ENSMUST00000227633.2 ENSMUST00000227697.2 |
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