Pregenerated sensors for GFOD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013150Ensembl transcript IDs: ENSMUST00000013294.16, ENSMUST00000155038.3
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAGATCAGATCGAATGGGAGGGTGGGGGAAGATCCCTAAGGGATaGCCTGTCACCGCCTTCTCCAGTCCTGAGATGCCCTGGTCCACA | + |
|
Preference number: 1 (lower is better) Translates to: KRSDRMGGWGKIPKG*PVTAFSSPEMPWST Trigger: TGTGGACCAGGGCATCTCAGGACTGGAGAAGGCGGTGACAGGTCATCCCTTAGGGATCTTCCCCCACCCTCCCATTCGATCTGATCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 90 bp | CCTTCTTCCAGTAGGGGGCGCTGCAGGACAAGTCTAGAACTAGTTTaGCTCACTCGCTCAGGGACTCTCACCATCTGGGCCATAAAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: PSSSRGRCRTSLELV*LTRSGTLTIWAIKA Trigger: AGCCTTTATGGCCCAGATGGTGAGAGTCCCTGAGCGAGTGAGCCAAACTAGTTCTAGACTTGTCCTGCAGCGCCCCCTACTGGAAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR TCA 90 bp | GTTAAAGGTTCAGTTCCCAGCACCCACTTCTTGCACTGGGAAATCTaGTGCCATCTTCTGGCCTCTGTGGGCACCTGCACTCATGAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: VKGSVPSTHFLHWEI*CHLLASVGTCTHEL Trigger: GAGCTCATGAGTGCAGGTGCCCACAGAGGCCAGAAGATGGCATCAGATTTCCCAGTGCAAGAAGTGGGTGCTGGGAACTGAACCTTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR GCA 90 bp | GAGATGGCTCAGCAGTTAAAGGTTCAGTTCCCAGCACCCACTTCTTaGACTGGGAAATCTGATGCCATCTTCTGGCCTCTGTGGGCACCT | + |
|
Preference number: 1 (lower is better) Translates to: EMAQQLKVQFPAPTS*TGKSDAIFWPLWAP Trigger: AGGTGCCCACAGAGGCCAGAAGATGGCATCAGATTTCCCAGTGCAAGAAGTGGGTGCTGGGAACTGAACCTTTAACTGCTGAGCCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 90 bp | TTCCCAGCACCCACTTCTTGCACTGGGAAATCTGATGCCATCTTCTaGCCTCTGTGGGCACCTGCACTCATGAGCTCACACAAACATAGA | + |
|
Preference number: 1 (lower is better) Translates to: FPAPTSCTGKSDAIF*PLWAPALMSSHKHR Trigger: TCTATGTTTGTGTGAGCTCATGAGTGCAGGTGCCCACAGAGGCCAGAAGATGGCATCAGATTTCCCAGTGCAAGAAGTGGGTGCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR GCA 90 bp | TTTACTCTGGAGAGCCAGCCCAGCAACAACATTCCAACCTTACTTTaGCTCACAGAGACGATGTTTGAAATCAGGGCAGCACGGGGACAT | + |
|
Preference number: 1 (lower is better) Translates to: FTLESQPSNNIPTLL*LTETMFEIRAARGH Trigger: ATGTCCCCGTGCTGCCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGCTGGGCTGGCTCTCCAGAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 90 bp | AGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGACTTCTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: RASDLITDGCEPPCG*WELNSGLLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 90 bp | GCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGGTaGGAATTGAACTCAGGACTTCTGGAAGAGCAGTCAGTGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ASDLITDGCEPPCGW*ELNSGLLEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 90 bp | CTTCCGGAGGTTGAAGACTTAACAGGCATTTTGGAAATTCTCATCTaGCTGGGATCTATCAAAGGGCTAACTCAGAAGAAACTTCTACCT | + |
|
Preference number: 1 (lower is better) Translates to: LPEVEDLTGILEILI*LGSIKGLTQKKLLP Trigger: AGGTAGAAGTTTCTTCTGAGTTAGCCCTTTGATAGATCCCAGCCAGATGAGAATTTCCAAAATGCCTGTTAAGTCTTCAACCTCCGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAACCTCCCTGGAGCCTCTaGCCCTTGGGAGGAAGCGCG | + |
|
Preference number: 2 (lower is better) Translates to: PMSTYPLFQHWEAISEHEPPWSL*PLGGSA Trigger: CGCGCTTCCTCCCAAGGGCCAGAGGCTCCAGGGAGG...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCATCCTGTCTTCTCGGAATGGCAGGTTTGGCAGCAGCCTAACAGGGAGCGATCGAATGGGAGGGTaGGGGAAGATCCCTAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALILSSRNGRFGSSLTGSDRMGG*GKIPKG Trigger: TCCCTTAGGGATCTTCCCCCACCCTCCCATTCGATC...GCTCCCTGTTAGGCTGCTGCCAAACCTGCCATTCCGAGAAGACAGGATGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAAGATGGGTGTTTTCCTTaGCCACCTTCAGTTGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PMSTYPLFQHWEAISEHEDGCFP*PPSVGS Trigger: GGAGCCAACTGAAGGTGGCCAAGGAAAACACCCATC...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAAGGGCACCTGCACTCATaGGCTCACACAAACATAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PMSTYPLFQHWEAISEHEGHLHS*AHTNID Trigger: ATCTATGTTTGTGTGAGCTCATGAGTGCAGGTGCCC...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTGCTGCCTTCTTCCAGTAGGGGGCGCTGCAGGACAAGTCTAGAACTAGTTCACAGAGACGATGTTTaGAATCAGGGCAGCACGGGG | + |
|
Preference number: 2 (lower is better) Translates to: KLLPSSSRGRCRTSLELVHRDDV*NQGSTG Trigger: CCCCGTGCTGCCCTGATTTCAAACATCGTCTCTGTG...AACTAGTTCTAGACTTGTCCTGCAGCGCCCCCTACTGGAAGAAGGCAGCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCACGGGGACATAGGTCCGATGGTTTCTATAAGTTGGGCCAAGAGGAAGAGACGACACCGTGTCTCTaGTACAGCCAATCCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: AARGHRSDGFYKLGQEEETTPCL*YSQSQV Trigger: GACCTGGGATTGGCTGTAGCAGAGACACGGTGTCGT...CTCTTCCTCTTGGCCCAACTTATAGAAACCATCGGACCTATGTCCCCGTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAAGATCTTCATTGGCCCTaGTCACTGGCAGAACCACAA | + |
|
Preference number: 2 (lower is better) Translates to: PMSTYPLFQHWEAISEHEDLHWP*SLAEPQ Trigger: TTGTGGTTCTGCCAGTGAGCAGGGCCAATGAAGATC...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTGCAGCGCCTTCGTCGTTCAAGCCAGGCTGAATCTTGCTGCAGAAAGTCAGCCTCTGTGGGCACCTaGACTCATGAGCTCACACAA | + |
|
Preference number: 2 (lower is better) Translates to: TVQRLRRSSQAESCCRKSASVGT*THELTQ Trigger: TTGTGTGAGCTCATGAGTGCAGGTGCCCACAGAGGC...TGACTTTCTGCAGCAAGATTCAGCCTGGCTTGAACGACGAAGGCGCTGCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACGGGGACATAGGTCCGATGGTTTCTATAAGTTGGGCCAAGAGGAAGAGCCTGTCTTCTCGGAATaGCAGGTTTGGCAGCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: AARGHRSDGFYKLGQEEEPVFSE*QVWQQP Trigger: AGGCTGCTGCCAAACCTGCCATTCCGAGAAGACAGG...CTCTTCCTCTTGGCCCAACTTATAGAAACCATCGGACCTATGTCCCCGTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCCCAGCACCCACTTCTTGCACTGGGAAATCTGATGCCATCTTCTGGCCTCGTCCCCAGGCAAGTCTaGGGAATCAATGATGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: SSQHPLLALGNLMPSSGLVPRQV*GINDGW Trigger: CCATCCATCATTGATTCCTCAGACTTGCCTGGGGAC...GAGGCCAGAAGATGGCATCAGATTTCCCAGTGCAAGAAGTGGGTGCTGGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCATCCTGTCTTCTCGGAATGGCAGGTTTGGCAGCAGCCTAACAGGGAGCTCAATGATGGATGGATaGGTGTTTTCCTTGGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: ALILSSRNGRFGSSLTGSSMMDG*VFSLAT Trigger: GGTGGCCAAGGAAAACACCCATCCATCCATCATTGA...GCTCCCTGTTAGGCTGCTGCCAAACCTGCCATTCCGAGAAGACAGGATGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | TCTGATGCCATCTTCTGGCCTCTGTGGGCACCTGCACTCATGAGCTCACACAAAAGTCCTGAGATGCCCTaGTCCACAACAGGCAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SDAIFWPLWAPALMSSHKSPEMP*STTGKV Trigger: AACCTTGCCTGTTGTGGACCAGGGCATCTCAGGACT...TTTGTGTGAGCTCATGAGTGCAGGTGCCCACAGAGGCCAGAAGATGGCATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTCACCTCATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTTCTCCAGTCCTGAGATaGCCTGGTCCACAACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: QLTSFLVTASSCSREVGSSPVLR*PGPQQA Trigger: TGCCTGTTGTGGACCAGGGCATCTCAGGACTGGAGA...ACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAATGAGGTGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTCACCTCATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTTCGGAATGGCAGGTTTaGCAGCAGCCTAACAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QLTSFLVTASSCSREVGSSEWQV*QQPNRE Trigger: CTCCCTGTTAGGCTGCTGCCAAACCTGCCATTCCGA...ACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAATGAGGTGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTGCAGCGCCTTCGTCGTTCAAGCCAGGCTGAATCTTGCTGCAGAAAGTCATGCCTCTGCTTCCCCTaGTCAGAGACAATAGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: TVQRLRRSSQAESCCRKSCLCFP*SETIGI Trigger: TATGCCTATTGTCTCTGACCAGGGGAAGCAGAGGCA...TGACTTTCTGCAGCAAGATTCAGCCTGGCTTGAACGACGAAGGCGCTGCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 90 bp | CCAGGCAAGTCTGAGGAATCAATGATGGATGGATGGGTGTTTTCCTaGGCCACCTTCAGTTGGCTCCTAACCCTGGCCCAAGCTGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: PGKSEESMMDGWVFS*ATFSWLLTLAQADL Trigger: TAAATCAGCTTGGGCCAGGGTTAGGAGCCAACTGAAGGTGGCCAAGGAAAACACCCATCCATCCATCATTGATTCCTCAGACTTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | GCAACAACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTTGAAATCAGGGCGCCTTCTCCAGTCCTaGGATGCCCTGGTCCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: ATTFQPYFASQRRCLKSGRLLQS*DALVHN Trigger: GTTGTGGACCAGGGCATCTCAGGACTGGAGAAGGCG...CCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTCACCTCATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTTGGAGCTCGAGCTCGTaGAGAAGGGAGAACAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: QLTSFLVTASSCSREVGSWSSSS*RRENNN Trigger: GTTGTTGTTCTCCCTTCTTCACGAGCTCGAGCTCCA...ACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAATGAGGTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTTGTCAGGGGTCCCAGCACCCACTTCTTaGACTGGGAAATCTGATGCC | + |
|
Preference number: 2 (lower is better) Translates to: ILSDCKFLFQGGGKLSGVPAPTS*TGKSDA Trigger: GGCATCAGATTTCCCAGTGCAAGAAGTGGGTGCTGG...GACCCCTGACAACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | TGGTGGGAATTGAACTCAGGACTTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTCTACCTAAAAGCTGCTaGCTTCTTCCAGTAGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: WWELNSGLLEEQSVLLTALPKSC*LLPVGG Trigger: GCCCCCTACTGGAAGAAGGCAGCAGCTTTTAGGTAG...AGCGGTTAAGAGCACTGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTGCAGCGCCTTCGTCGTTCAAGCCAGGCTGAATCTTGCTGCAGAAAGTCATCTGCTGCAGATATTTaGAGAGCGTTTGGGAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TVQRLRRSSQAESCCRKSSAADI*RAFGSH Trigger: ATGGCTCCCAAACGCTCTCCAAATATCTGCAGCAGA...TGACTTTCTGCAGCAAGATTCAGCCTGGCTTGAACGACGAAGGCGCTGCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTGCTGCCTTCTTCCAGTAGGGGGCGCTGCAGGACAAGTCTAGAACTAGTTAAGATTCCCCAGGGTTaGAATAAGGGCACCTTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KLLPSSSRGRCRTSLELVKIPQG*NKGTLR Trigger: CCTTAAGGTGCCCTTATTCCAACCCTGGGGAATCTT...AACTAGTTCTAGACTTGTCCTGCAGCGCCCCCTACTGGAAGAAGGCAGCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | GGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATCATAATCCAGCAGATGACAATCCCAGGTCCCAGTaGCCTCCCTGGAGCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GNLKKEQASLRHHNPADDNPRSQ*PPWSLW Trigger: CCAGAGGCTCCAGGGAGGGCACTGGGACCTGGGATT...GTCATCTGCTGGATTATGATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 90 bp | GATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGGTGGGAATaGAACTCAGGACTTCTGGAAGAGCAGTCAGTGCTCTTAACCGCT | + |
|
Preference number: 2 (lower is better) Translates to: DLITDGCEPPCGWWE*NSGLLEEQSVLLTA Trigger: AGCGGTTAAGAGCACTGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | AAGGAGCCCAGACAAGGGGGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATGGCTTGCAAGGGGGCTaGAAAGATCAGATCGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: KEPRQGGNLKKEQASLRHGLQGG*KDQIEW Trigger: CCATTCGATCTGATCTTTTCAGCCCCCTTGCAAGCC...ATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCCCCCTTGTCTGGGCTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 90 bp | CCAGCAACAACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTaGAAATCAGGGCAGCACGGGGACATAGGTCCGATGGTTTCTATA | + |
|
Preference number: 2 (lower is better) Translates to: PATTFQPYFASQRRC*KSGQHGDIGPMVSI Trigger: TATAGAAACCATCGGACCTATGTCCCCGTGCTGCCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTAGAACTAGTTTGGCTCACTCGCTCAGGGACTCTCACCATCTGGGCCATAAGTCTGAGGAATCAATaGTGGATGGATGGGTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLELVWLTRSGTLTIWAISLRNQ*WMDGCF Trigger: AAAACACCCATCCATCCATCATTGATTCCTCAGACT...TATGGCCCAGATGGTGAGAGTCCCTGAGCGAGTGAGCCAAACTAGTTCTAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTTGTCAGGGGTCGCTGCAGAAAGTCAATaGATGCCTAGGTTTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ILSDCKFLFQGGGKLSGVAAESQ*MPRFLR Trigger: TCTCAGAAACCTAGGCATTCATTGACTTTCTGCAGC...GACCCCTGACAACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTCACCTCATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTGGAATCAATGATGGATaGATGGGTGTTTTCCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QLTSFLVTASSCSREVGSGINDG*MGVFLG Trigger: GCCAAGGAAAACACCCATCCATCCATCATTGATTCC...ACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAATGAGGTGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | GCAACAACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTTGAAATCAGGGAACCTCCTTTTCTCTTaGAAGGGCTTGCAAGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ATTFQPYFASQRRCLKSGNLLFS*KGLQGG Trigger: GCCCCCTTGCAAGCCCTTCCAAGAGAAAAGGAGGTT...CCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTACAGATGGTTGTGAGCCACCATGTGGTTGGTGGGAATTGAACTCAGGACATATTGATCTTCATTaGCCCTGCTCACTGGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LITDGCEPPCGWWELNSGHIDLH*PCSLAE Trigger: TTCTGCCAGTGAGCAGGGCCAATGAAGATCAATATG...TCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTAGAACTAGTTTGGCTCACTCGCTCAGGGACTCTCACCATCTGGGCCATAGATTTTGTTTTCCTTTaGGACATGTTCTTGCTACGT | + |
|
Preference number: 2 (lower is better) Translates to: SLELVWLTRSGTLTIWAIDFVFL*DMFLLR Trigger: ACGTAGCAAGAACATGTCTCAAAGGAAAACAAAATC...TATGGCCCAGATGGTGAGAGTCCCTGAGCGAGTGAGCCAAACTAGTTCTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR GCA 90 bp | TGGTGGGAATTGAACTCAGGACTTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTATTCCAACCTTACTTTaGCTCACAGAGACGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: WWELNSGLLEEQSVLLTAIPTLL*LTETMF Trigger: AAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAAT...AGCGGTTAAGAGCACTGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR GCA 72 bp | CACCGTGTCTCTGCTACAGCCAATCCCAGGTCCCAGTaGCCTCCCTGGAGCCTCTGGCCCTTGGGAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HRVSATANPRSQ*PPWSLWPLGGS Trigger: GCTTCCTCCCAAGGGCCAGAGGCTCCAGGGAGGGCACTGGGACCTGGGATTGGCTGTAGCAGAGACACGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR TCA 72 bp | GATCGAATGGGAGGGTGGGGGAAGATCCCTAAGGGATaGCCTGTCACCGCCTTCTCCAGTCCTGAGATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DRMGGWGKIPKG*PVTAFSSPEMP Trigger: GGGCATCTCAGGACTGGAGAAGGCGGTGACAGGTCATCCCTTAGGGATCTTCCCCCACCCTCCCATTCGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAACTTGGCCACCTTCAGTaGGCTCCTAACCCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PMSTYPLFQHWEAISEHELGHLQ*APNPGP Trigger: TGGGCCAGGGTTAGGAGCCAACTGAAGGTGGCCAAG...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | AGTAGGGGGCGCTGCAGGACAAGTCTAGAACTAGTTTaGCTCACTCGCTCAGGGACTCTCACCATCTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SRGRCRTSLELV*LTRSGTLTIWA Trigger: GGCCCAGATGGTGAGAGTCCCTGAGCGAGTGAGCCAAACTAGTTCTAGACTTGTCCTGCAGCGCCCCCTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTACAGATGGTTGTGAGCCACCATGTGGTTGGTGGGAATTGAACTCAGGATGGAGCCTCTGGCCCTaGGGAGGAAGCGCGCATGCG | + |
|
Preference number: 3 (lower is better) Translates to: LITDGCEPPCGWWELNSGWSLWP*GGSAHA Trigger: CGCATGCGCGCTTCCTCCCAAGGGCCAGAGGCTCCA...TCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR TCA 72 bp | AGGACCTCTGGAAGAACAGCTGGTGCTCTTAACCACTaGACCATCTCTCAGCCACCCCAACCCCCTTCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTSGRTAGALNH*TISQPPQPPSG Trigger: TCCGGAAGGGGGTTGGGGTGGCTGAGAGATGGTTCAGTGGTTAAGAGCACCAGCTGTTCTTCCAGAGGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR GCA 72 bp | AGGGATGACCTGTCACCGCCTTCTCCAGTCCTGAGATaGCCTGGTCCACAACAGGCAAGGTTTCTTGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RDDLSPPSPVLR*PGPQQARFLAI Trigger: GATGGCAAGAAACCTTGCCTGTTGTGGACCAGGGCATCTCAGGACTGGAGAAGGCGGTGACAGGTCATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | CCAGGCTCTCATCCTGTCTTCTCGGAATGGCAGGTTTaGCAGCAGCCTAACAGGGAGCCTCATATCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGSHPVFSEWQV*QQPNREPHILS Trigger: AGAGAGGATATGAGGCTCCCTGTTAGGCTGCTGCCAAACCTGCCATTCCGAGAAGACAGGATGAGAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | CCCACTTCTTGCACTGGGAAATCTGATGCCATCTTCTaGCCTCTGTGGGCACCTGCACTCATGAGCTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: PTSCTGKSDAIF*PLWAPALMSSH Trigger: GTGTGAGCTCATGAGTGCAGGTGCCCACAGAGGCCAGAAGATGGCATCAGATTTCCCAGTGCAAGAAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACGGGGACATAGGTCCGATGGTTTCTATAAGTTGGGCCAAGAGGAAGAGAAACCTCCTTTTCTCTaGGAAGGGCTTGCAAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AARGHRSDGFYKLGQEEEKPPFL*EGLARG Trigger: CCCCCTTGCAAGCCCTTCCAAGAGAAAAGGAGGTTT...CTCTTCCTCTTGGCCCAACTTATAGAAACCATCGGACCTATGTCCCCGTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | GAAGAGCCCATATTGATCTTCATTGGCCCTGCTCACTaGCAGAACCACAAGGGGTCAGGCTACAGCTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: EEPILIFIGPAH*QNHKGSGYSSI Trigger: GATAGAGCTGTAGCCTGACCCCTTGTGGTTCTGCCAGTGAGCAGGGCCAATGAAGATCAATATGGGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTTGTCAGGGGTCGGATGGGTGTTTTCCTaGGCCACCTTCAGTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ILSDCKFLFQGGGKLSGVGWVFS*ATFSWL Trigger: GAGCCAACTGAAGGTGGCCAAGGAAAACACCCATCC...GACCCCTGACAACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR GCA 72 bp | CAGCAGTTAAAGGTTCAGTTCCCAGCACCCACTTCTTaGACTGGGAAATCTGATGCCATCTTCTGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QQLKVQFPAPTS*TGKSDAIFWPL Trigger: CAGAGGCCAGAAGATGGCATCAGATTTCCCAGTGCAAGAAGTGGGTGCTGGGAACTGAACCTTTAACTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | TGCACTGGGAAATCTGATGCCATCTTCTGGCCTCTGTaGGCACCTGCACTCATGAGCTCACACAAACATAGA | + |
|
Preference number: 3 (lower is better) Translates to: CTGKSDAIFWPL*APALMSSHKHR Trigger: TCTATGTTTGTGTGAGCTCATGAGTGCAGGTGCCCACAGAGGCCAGAAGATGGCATCAGATTTCCCAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | GGAGTTATAGTCAGTTGTGAGCTGCCATGTAGGTGCTaGGAATTGAACCCAGGACCTCTGGAAGAACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVIVSCELPCRC*ELNPGPLEEQL Trigger: CAGCTGTTCTTCCAGAGGTCCTGGGTTCAATTCCCAGCACCTACATGGCAGCTCACAACTGACTATAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCCCAGACAAGGGGGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATAGCACAGCTGGTGGCTaGCTGGCTGACTCAAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KEPRQGGNLKKEQASLRHSTAGG*LADSSS Trigger: ACTACTTGAGTCAGCCAGCAAGCCACCAGCTGTGCT...ATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCCCCCTTGTCTGGGCTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR TCA 72 bp | TACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTaGGCACGAACATCTCTAAAACCTACCCAACATTTC | + |
|
Preference number: 3 (lower is better) Translates to: YLPPLPALGGDL*ARTSLKPTQHF Trigger: GAAATGTTGGGTAGGTTTTAGAGATGTTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR GCA 72 bp | GAGAGCCAGCCCAGCAACAACATTCCAACCTTACTTTaGCTCACAGAGACGATGTTTGAAATCAGGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESQPSNNIPTLL*LTETMFEIRAA Trigger: TGCTGCCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGCTGGGCTGGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR GCA 72 bp | AAAGGGCTAACTCAGAAGAAACTTCTACCTAAAAGCTaGTGCCTTCTTCCAGTAGGGGGCGCTGCAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: KGLTQKKLLPKS*CLLPVGGAAGQ Trigger: TTGTCCTGCAGCGCCCCCTACTGGAAGAAGGCAGCAGCTTTTAGGTAGAAGTTTCTTCTGAGTTAGCCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | TACGTAGACCAGGCTGGCCTTAAACATGGTTTACTCTaGAGAGCCAGCCCAGCAACAACATTCCAACCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: YVDQAGLKHGLL*RASPATTFQPY Trigger: GTAAGGTTGGAATGTTGTTGCTGGGCTGGCTCTCCAGAGTAAACCATGTTTAAGGCCAGCCTGGTCTACGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR TCA 72 bp | GTTCAAGCCAGGCTGAATCTTGCTGCAGAAAGTCAATaGATGCCTAGGTTTCTGAGAGAAGATTCCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VQARLNLAAESQ*MPRFLREDSPG Trigger: CCCTGGGGAATCTTCTCTCAGAAACCTAGGCATTCATTGACTTTCTGCAGCAAGATTCAGCCTGGCTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR TCA 72 bp | CCAAAAGAGGGCATCAGATCTCATTACAGATGGTTGTaGGCCACCATGTGGTTGGTGGGAATTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PKEGIRSHYRWL*ATMWLVGIELR Trigger: CCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTCTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | CTCATTACAGATGGTTGTGAGCCACCATGTGGTTGGTaGGAATTGAACTCAGGACTTCTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LITDGCEPPCGW*ELNSGLLEEQS Trigger: TGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | GATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGACTTCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLITDGCEPPCG*WELNSGLLEEQ Trigger: CTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CAA 90 bp | TGTATAACACAGAAACCTCCTTTTCTCTTGGAAGGGCTTGCAAGGGGGCTGAAACCTGAAGAGCCCATATaGATCTTCATTGGCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CITQKPPFLLEGLARGLKPEEPI*IFIGPA Trigger: AGCAGGGCCAATGAAGATCAATATGGGCTCTTCAGG...TTTCAGCCCCCTTGCAAGCCCTTCCAAGAGAAAAGGAGGTTTCTGTGTTATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR-3UTR CAA 90 bp | CGCTCAGGGACTCTCACCATCTGGGCCATAAAGGCTCAGCTCACCTCATTCTTAAAAGAACAGGCTTCATaGAGACATCATAATCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSGTLTIWAIKAQLTSFLKEQAS*RHHNPA Trigger: TGCTGGATTATGATGTCTCAATGAAGCCTGTTCTTT...TAAGAATGAGGTGAGCTGAGCCTTTATGGCCCAGATGGTGAGAGTCCCTGAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | ATGGATGGATGGGTGTTTTCCTTGGCCACCTTCAGTTaGCTCCTAACCCTGGCCCAAGCTGATTTATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: MDGWVFSLATFS*LLTLAQADLFK Trigger: TTTAAATAAATCAGCTTGGGCCAGGGTTAGGAGCCAACTGAAGGTGGCCAAGGAAAACACCCATCCATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CCA 72 bp | GTTGAAGACTTAACAGGCATTTTGGAAATTCTCATCTaGCTGGGATCTATCAAAGGGCTAACTCAGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VEDLTGILEILI*LGSIKGLTQKK Trigger: TTTCTTCTGAGTTAGCCCTTTGATAGATCCCAGCCAGATGAGAATTTCCAAAATGCCTGTTAAGTCTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR TCA 72 bp | AAAGAAATCCAACCCCAAACAAACGACCACACACCATaGTGTCAGTTCTTTTCTGACTTATTTACTGACATT | + |
|
Preference number: 3 (lower is better) Translates to: KEIQPQTNDHTP*CQFFSDLFTDI Trigger: AATGTCAGTAAATAAGTCAGAAAAGAACTGACATCATGGTGTGTGGTCGTTTGTTTGGGGTTGGATTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | CATCAGCTGTGGGTAGTAGCGAGATGCGGTCACCATCCGGAAGGCGTCCATGGAGACCAGGACCCGGGCTaGGCTGCCAGTCCCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: HQLWVVARCGHHPEGVHGDQDPG*AASPEH Trigger: GTGTTCGGGACTGGCAGCTCAGCCCGGGTCCTGGTC...TCCATGGACGCCTTCCGGATGGTGACCGCATCTCGCTACTACCCACAGCTGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGTAGTAGCGAGATGCGGTCACCATCCGGAAGGCGTCCATGGATGTCGCCACGGTGAAGCCCTCTaGCCTCAGCAGCGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWVVARCGHHPEGVHGCRHGEAL*PQQRDQ Trigger: CTGGTCCCGCTGCTGAGGGCAGAGGGCTTCACCGTG...GCGACATCCATGGACGCCTTCCGGATGGTGACCGCATCTCGCTACTACCCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS-3UTR GCA 90 bp | GGCACAGGCCCCTTCCTCCTTAAGCTCCTCCCGAGGGCTCTCCTGGAGCCAGCCATCTCCTCGGCCAGCTaGTTTGCCTCTTCCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPFLLKLLPRALLEPAISSAS*FASSSV Trigger: GACTGAGGAAGAGGCAAAGCAGCTGGCCGAGGAGAT...GGCTGGCTCCAGGAGAGCCCTCGGGAGGAGCTTAAGGAGGAAGGGGCCTGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | TCATCAGCTGTGGGTAGTAGCGAGATGCGGTCACCATCCGGAAGGCGTCCATGGTCCTCCCAAGCACCCTaGCCCTTGAGCCGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAVGSSEMRSPSGRRPWSSQAP*PLSRPQ Trigger: CTGTGGACGGCTCAAGGGTCAGGGTGCTTGGGAGGA...CCATGGACGCCTTCCGGATGGTGACCGCATCTCGCTACTACCCACAGCTGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS-3UTR GCA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAAACATCCTGGGGACCTTaGTCAGGGAGCCCTGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PMSTYPLFQHWEAISEHETSWGP*SGSPAP Trigger: GGGCGCAGGGCTCCCTGAGCAAGGTCCCCAGGATGT...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGGTAGTAGCGAGATGCGGTCACCATCCGGAAGGCGTCCATGGATGTCGGGCTGGTGTAGAAGGTaGTGTTCATCTCCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVGSSEMRSPSGRRPWMSGWCRR*CSSPRP Trigger: TGGCCGAGGAGATGAACATCACCTTCTACACCAGCC...CGACATCCATGGACGCCTTCCGGATGGTGACCGCATCTCGCTACTACCCACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS-3UTR TCA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAACAGTCCGTCCTCGAATaGGGCAGCCATAGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMSTYPLFQHWEAISEHEQSVLE*GSHRDR Trigger: CCTGTCTCTATGGCTGCCTCATTCGAGGACGGACTG...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR GCA 90 bp | CCAAGCTCATCAGCTGTGGGTAGTAGCGAGATGCGGTCACCATCCGGAAGGCGTATCTCCTCGGCCAGCTaGTTTGCCTCTTCCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSSAVGSSEMRSPSGRRISSAS*FASSSV Trigger: GACTGAGGAAGAGGCAAAGCAGCTGGCCGAGGAGAT...ACGCCTTCCGGATGGTGACCGCATCTCGCTACTACCCACAGCTGATGAGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCAGCGCCTTCGTCGTTCAAGCCAGGCTGAATCTTGCTGCAGAAAGTCATTGCTCAGGGAGCCCTaGGCCCACAGCCAGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVQRLRRSSQAESCCRKSLLREP*AHSQRV Trigger: GACTCTCTGGCTGTGGGCGCAGGGCTCCCTGAGCAA...TGACTTTCTGCAGCAAGATTCAGCCTGGCTTGAACGACGAAGGCGCTGCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR GCA 90 bp | TGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAACATCGGCATCTGGCTCCTCTaGCAGCATCTCCACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLTPSSSTGRRSLSTNIGIWLL*QHLHSL Trigger: GAGACTGTGGAGATGCTGGCAGAGGAGCCAGATGCC...GATGTTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | GACACCGTGTCTCTGCTACAGCCAATCCCAGGTCCCAGTGCCCTCCCTGGAGCCGTTTCACTTAGATTCTaGTTGGCATCTGGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTVSLLQPIPGPSALPGAVSLRF*LASGSS Trigger: AGAGGAGCCAGATGCCAACCAGAATCTAAGTGAAAC...GGCTCCAGGGAGGGCACTGGGACCTGGGATTGGCTGTAGCAGAGACACGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | GCAGCACGGGGACATAGGTCCGATGGTTTCTATAAGTTGGGCCAAGAGGAAGAGGCCTCACAAAGGTCTTaGGGAGCCCGTGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AARGHRSDGFYKLGQEEEASQRS*GARAPS Trigger: AGAAGGTGCACGGGCTCCTCAAGACCTTTGTGAGGC...CTCTTCCTCTTGGCCCAACTTATAGAAACCATCGGACCTATGTCCCCGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | TGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAACATCGGATGCCACGGATGGTaGCATTCTGCCTCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLTPSSSTGRRSLSTNIGCHGW*HSASQR Trigger: CCTTTGTGAGGCAGAATGCCACCATCCGTGGCATCC...GATGTTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR GCA 90 bp | AAGGAGCCCAGACAAGGGGGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATCACGGTGAAGCCCTCTaGCCTCAGCAGCGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEPRQGGNLKKEQASLRHHGEAL*PQQRDQ Trigger: CTGGTCCCGCTGCTGAGGGCAGAGGGCTTCACCGTG...ATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCCCCCTTGTCTGGGCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | TCTGATGCCATCTTCTGGCCTCTGTGGGCACCTGCACTCATGAGCTCACACAAATCATCACTGGTGACATaGCGGATGCCACGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDAIFWPLWAPALMSSHKSSLVT*RMPRMV Trigger: CACCATCCGTGGCATCCGCCATGTCACCAGTGATGA...TTTGTGTGAGCTCATGAGTGCAGGTGCCCACAGAGGCCAGAAGATGGCATCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | CTAGGCCTTTTTGGCAAGGAGCCCAGACAAGGGGGAAATCTGAAGAAAGAACAGAGCAGTGGGACATCCTaGGGACCTTGCTCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLFGKEPRQGGNLKKEQSSGTS*GPCSGS Trigger: GCTCCCTGAGCAAGGTCCCCAGGATGTCCCACTGCT...CTGTTCTTTCTTCAGATTTCCCCCTTGTCTGGGCTCCTTGCCAAAAAGGCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | AACAGGCATTTTGGAAATTCTCATCTGGCTGGGATCTATCAAAGGGCTAACTCAGACCAGGACCCGGGCTaGGCTGCCAGTCCCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: NRHFGNSHLAGIYQRANSDQDPG*AASPEH Trigger: GTGTTCGGGACTGGCAGCTCAGCCCGGGTCCTGGTC...TGAGTTAGCCCTTTGATAGATCCCAGCCAGATGAGAATTTCCAAAATGCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | ACTGTGCAGCGCCTTCGTCGTTCAAGCCAGGCTGAATCTTGCTGCAGAAAGTCACGTAGTGCTCTGCAATaGGCTGTTTCATGCGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: TVQRLRRSSQAESCCRKSRSALQ*AVSCAR Trigger: TCGTGCGCATGAAACAGCTCATTGCAGAGCACTACG...TGACTTTCTGCAGCAAGATTCAGCCTGGCTTGAACGACGAAGGCGCTGCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | GCAACAACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTTGAAATCAGGGAGCCGTAGCTGGGGCTaGGCAGGCTCCCGGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATTFQPYFASQRRCLKSGSRSWG*AGSRSR Trigger: TCTACTCCGGGAGCCTGCTCAGCCCCAGCTACGGCT...CCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | CTAGGCCTTTTTGGCAAGGAGCCCAGACAAGGGGGAAATCTGAAGAAAGAACAGTCCGGAAGGCGTCCATaGATGTCGCTGCCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLFGKEPRQGGNLKKEQSGRRP*MSLPSH Trigger: GTGAGAAGGCAGCGACATCCATGGACGCCTTCCGGA...CTGTTCTTTCTTCAGATTTCCCCCTTGTCTGGGCTCCTTGCCAAAAAGGCCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 72 bp | TCCTGTGAGACCACAACTCAGCCTGAAGAGCCCATATaGATCTTCATTGGCCCTGCTCACTGGCAGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCETTTQPEEPI*IFIGPAHWQNH Trigger: GTGGTTCTGCCAGTGAGCAGGGCCAATGAAGATCAATATGGGCTCTTCAGGCTGAGTTGTGGTCTCACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 72 bp | ATAGTCAGTTGTGAGCTGCCATGTAGGTGCTGGGAATaGAACCCAGGACCTCTGGAAGAACAGCTGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVSCELPCRCWE*NPGPLEEQLVL Trigger: GAGCACCAGCTGTTCTTCCAGAGGTCCTGGGTTCAATTCCCAGCACCTACATGGCAGCTCACAACTGACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGAATTGAACTCAGGACTTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGGCTGGTGTAGAAGGTaGTGTTCATCTCCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WWELNSGLLEEQSVLLTAGWCRR*CSSPRP Trigger: TGGCCGAGGAGATGAACATCACCTTCTACACCAGCC...AGCGGTTAAGAGCACTGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | CCCATGTCTACTTACCCCCTCTTCCAGCACTGGGAGGCGATCTCTGAGCACGAACACAGGTTGTTCCGCTaGAGTGTTTCACTTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PMSTYPLFQHWEAISEHEHRLFR*SVSLRF Trigger: GAATCTAAGTGAAACACTTCAGCGGAACAACCTGTG...TTCGTGCTCAGAGATCGCCTCCCAGTGCTGGAAGAGGGGGTAAGTAGACATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | CTCATTACAGATGGTTGTGAGCCACCATGTGGTTGGTGGGAATTGAACTCAGGAGGCGGATGCCACGGATaGTGGCATTCTGCCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LITDGCEPPCGWWELNSGGGCHG*WHSASQ Trigger: TTGTGAGGCAGAATGCCACCATCCGTGGCATCCGCC...TCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGTAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR GCA 90 bp | AAGGAGCCCAGACAAGGGGGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATTGGGTAGTAGCGAGATaGGGTCACCATCCGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEPRQGGNLKKEQASLRHWVVAR*GHHPEG Trigger: GCCTTCCGGATGGTGACCGCATCTCGCTACTACCCA...ATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCCCCCTTGTCTGGGCTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | ATTCTTAGTGACTGCAAGTTCTTGTTCCAGGGAGGTGGGAAGTTGTCAGGGGTCACCTTCTCGGCTTTCTaGCCAGTCAAGTGGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILSDCKFLFQGGGKLSGVTFSAF*PVKWVN Trigger: GTTGACCCACTTGACTGGCCAGAAAGCCGAGAAGGT...GACCCCTGACAACTTCCCACCTCCCTGGAACAAGAACTTGCAGTCACTAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | TCTGATGCCATCTTCTGGCCTCTGTGGGCACCTGCACTCATGAGCTCACACAAAATGCACAAAGGCACCTaGCATGTTGAAGTTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDAIFWPLWAPALMSSHKMHKGT*HVEVEG Trigger: ACCCTCAACTTCAACATGCCAGGTGCCTTTGTGCAT...TTTGTGTGAGCTCATGAGTGCAGGTGCCCACAGAGGCCAGAAGATGGCATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 72 bp | TCTGAGGAATCAATGATGGATGGATGGGTGTTTTCCTaGGCCACCTTCAGTTGGCTCCTAACCCTGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SEESMMDGWVFS*ATFSWLLTLAQ Trigger: TTGGGCCAGGGTTAGGAGCCAACTGAAGGTGGCCAAGGAAAACACCCATCCATCCATCATTGATTCCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGGTGGGAATaGAACTCAGGACTTCTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGWWE*NSGLLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGAAGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR GCA 90 bp | GGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATCATAATCCAGCAGATGACGCCTTCACGGATATCTaGCGGGTGAGCGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLKKEQASLRHHNPADDAFTDI*RVSGGG Trigger: CCCACCTCCGCTCACCCGGCAGATATCCGTGAAGGC...GTCATCTGCTGGATTATGATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR GCA 90 bp | GCAACAACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTTGAAATCAGGGGTCTTGAGGAGCCCGTaGACCTTCTCGGCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATTFQPYFASQRRCLKSGVLRSP*TFSAFW Trigger: CCAGAAAGCCGAGAAGGTGCACGGGCTCCTCAAGAC...CCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 72 bp | ACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTaGAAATCAGGGCAGCACGGGGACATAGGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TFQPYFASQRRC*KSGQHGDIGPM Trigger: CATCGGACCTATGTCCCCGTGCTGCCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR TCA 90 bp | AACAGGCATTTTGGAAATTCTCATCTGGCTGGGATCTATCAAAGGGCTAACTCACGGAGCCCACTACCATaGCCTCATGCACAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRHFGNSHLAGIYQRANSRSPLP*PHAQRH Trigger: GTGCCTTTGTGCATGAGGTCATGGTAGTGGGCTCCG...TGAGTTAGCCCTTTGATAGATCCCAGCCAGATGAGAATTTCCAAAATGCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR GCA 90 bp | GGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATCATAATCCAGCAGATGACCAGCAGCTCCTCCTGTaGAGCAGAGTTCTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GNLKKEQASLRHHNPADDQQLLL*SRVLLP Trigger: GGGCAGAAGAACTCTGCTGCACAGGAGGAGCTGCTG...GTCATCTGCTGGATTATGATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | GCAACAACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTTGAAATCAGGGCAAGCTCATCAGCTGTaGGTAGTAGCGAGATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATTFQPYFASQRRCLKSGQAHQL*VVARCG Trigger: ACCGCATCTCGCTACTACCCACAGCTGATGAGCTTG...CCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | TGTATAACACAGAAACCTCCTTTTCTCTTGGAAGGGCTTGCAAGGGGGCTGAAACACTTAGATTCTGGTTaGCATCTGGCTCCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CITQKPPFLLEGLARGLKHLDSG*HLAPLP Trigger: TGGCAGAGGAGCCAGATGCCAACCAGAATCTAAGTG...TTTCAGCCCCCTTGCAAGCCCTTCCAAGAGAAAAGGAGGTTTCTGTGTTATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 72 bp | AACCCCCTTCCGGAGGTTGAAGACTTAACAGGCATTTaGGAAATTCTCATCTGGCTGGGATCTATCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPLPEVEDLTGI*EILIWLGSIKG Trigger: CCCTTTGATAGATCCCAGCCAGATGAGAATTTCCAAAATGCCTGTTAAGTCTTCAACCTCCGGAAGGGGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | GCAACAACATTCCAACCTTACTTTGCCTCACAGAGACGATGTTTGAAATCAGGGTTTCAAGTAAAGCAGTaGGACATCCTGGGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATTFQPYFASQRRCLKSGFQVKQ*DILGTL Trigger: CAAGGTCCCCAGGATGTCCCACTGCTTTACTTGAAA...CCCTGATTTCAAACATCGTCTCTGTGAGGCAAAGTAAGGTTGGAATGTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CCA 90 bp | GGAAATCTGAAGAAAGAACAGGCTTCATTGAGACATCATAATCCAGCAGATGACATTCTGGTTGGCATCTaGCTCCTCTGCCAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNLKKEQASLRHHNPADDILVGI*LLCQHL Trigger: GAGATGCTGGCAGAGGAGCCAGATGCCAACCAGAAT...GTCATCTGCTGGATTATGATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| 3UTR CAA 72 bp | AGACAAGGGGGAAATCTGAAGAAAGAACAGGCTTCATaGAGACATCATAATCCAGCAGATGACAAGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQGGNLKKEQAS*RHHNPADDKGN Trigger: GTTCCCCTTGTCATCTGCTGGATTATGATGTCTCAATGAAGCCTGTTCTTTCTTCAGATTTCCCCCTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS GCA 90 bp | GTTCTTCTGCCCATAGAGGTCAGCTCCCCGGGCAACAAGGCGCCCTaGGGAGCCCACTACCATGACCTCATGCACAAAGGCACCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLLPIEVSSPGNKAP*GAHYHDLMHKGTWH Trigger: ATGCCAGGTGCCTTTGTGCATGAGGTCATGGTAGTGGGCTCCGCAGGGCGCCTTGTTGCCCGGGGAGCTGACCTCTATGGGCAGAAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS TCA 90 bp | CATGGCGGATGCCACGGATGGTGGCATTCTGCCTCACAAAGGTCTTaGGGAGCCCGTGCACCTTCTCGGCTTTCTGGCCAGTCAAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGGCHGWWHSASQRS*GARAPSRLSGQSSG Trigger: CCCACTTGACTGGCCAGAAAGCCGAGAAGGTGCACGGGCTCCTCAAGACCTTTGTGAGGCAGAATGCCACCATCCGTGGCATCCGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTCCCGAGGGCTCTCCTGGAGCCAGCCACACCACAGCTTCCATAACAGATGCCTCACAAAGGTCTaGAGGAGCCCGTGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRGLSWSQPHHSFHNRCLTKV*RSPCTF Trigger: GAAGGTGCACGGGCTCCTCAAGACCTTTGTGAGGCA...TCTGTTATGGAAGCTGTGGTGTGGCTGGCTCCAGGAGAGCCCTCGGGAGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS TCA 90 bp | GCTACAGCAAGGAGCACCCGTAGAATATGGCGTCACTGCGTCCAGTaGTGTCAGGCCAGGATCCCCTTCCACTTCCTGCTCTTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATARSTRRIWRHCVQ*CQARIPFHFLLFSR Trigger: TCTGGAGAAGAGCAGGAAGTGGAAGGGGATCCTGGCCTGACATCACTGGACGCAGTGACGCCATATTCTACGGGTGCTCCTTGCTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS CCA 90 bp | GCTGTGGGTAGTAGCGAGATGCGGTCACCATCCGGAAGGCGTCCATaGATGTCGCTGCCTTCTCACACACCACGTTCTTCCCAATTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: AVGSSEMRSPSGRRP*MSLPSHTPRSSQFL Trigger: TAGGAATTGGGAAGAACGTGGTGTGTGAGAAGGCAGCGACATCCATGGACGCCTTCCGGATGGTGACCGCATCTCGCTACTACCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS CCA 90 bp | ACGCAAGGCCTGAACCATATAGACCATACCTTTCAAGTAAAGCAGTaGGACATCCTGGGGACCTTGCTCAGGGAGCCCTGCGCCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQGLNHIDHTFQVKQ*DILGTLLREPCAHS Trigger: GCTGTGGGCGCAGGGCTCCCTGAGCAAGGTCCCCAGGATGTCCCACTGCTTTACTTGAAAGGTATGGTCTATATGGTTCAGGCCTTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS GCA 90 bp | TCACACACCACGTTCTTCCCAATTCCTAGAGCCTTCACGGATATCTaGCGGGTGAGCGGAGGTGGGATGTTGATGCAGACCAGGTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: SHTTFFPIPRAFTDI*RVSGGGMLMQTRST Trigger: CGTAGACCTGGTCTGCATCAACATCCCACCTCCGCTCACCCGGCAGATATCCGTGAAGGCTCTAGGAATTGGGAAGAACGTGGTGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS TCA 90 bp | TTTAATAGCATCTACCACGCTCTGCATATACAGTCCGTCCTCGAATaGGGCAGCCATAGAGACAGGGGTGCGGTCCCAGGTACGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: FNSIYHALHIQSVLE*GSHRDRGAVPGTAI Trigger: GATCGCCGTACCTGGGACCGCACCCCTGTCTCTATGGCTGCCTCATTCGAGGACGGACTGTATATGCAGAGCGTGGTAGATGCTATTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTGCCTTCTTCCAGTAGGGGGCGCTGCAGGACAAGTCTAGAACTAGTTCCTGGCATGTTGAAGTaGAGGGTCACTGTGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLLPSSSRGRCRTSLELVPGMLK*RVTVLH Trigger: ATGCAGCACAGTGACCCTCAACTTCAACATGCCAGG...AACTAGTTCTAGACTTGTCCTGCAGCGCCCCCTACTGGAAGAAGGCAGCAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS-3UTR CAA 90 bp | ACTGTGCAGCGCCTTCGTCGTTCAAGCCAGGCTGAATCTTGCTGCAGAAAGTCAAAGGCACCTGGCATGTaGAAGTTGAGGGTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVQRLRRSSQAESCCRKSKAPGM*KLRVTV Trigger: CACAGTGACCCTCAACTTCAACATGCCAGGTGCCTT...TGACTTTCTGCAGCAAGATTCAGCCTGGCTTGAACGACGAAGGCGCTGCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS GCA 72 bp | CCCATAGAGGTCAGCTCCCCGGGCAACAAGGCGCCCTaGGGAGCCCACTACCATGACCTCATGCACAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PIEVSSPGNKAP*GAHYHDLMHKG Trigger: GCCTTTGTGCATGAGGTCATGGTAGTGGGCTCCGCAGGGCGCCTTGTTGCCCGGGGAGCTGACCTCTATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS TCA 72 bp | TGCCACGGATGGTGGCATTCTGCCTCACAAAGGTCTTaGGGAGCCCGTGCACCTTCTCGGCTTTCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CHGWWHSASQRS*GARAPSRLSGQ Trigger: CTGGCCAGAAAGCCGAGAAGGTGCACGGGCTCCTCAAGACCTTTGTGAGGCAGAATGCCACCATCCGTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS CAA 90 bp | ACATGGCGGATGCCACGGATGGTGGCATTCTGCCTCACAAAGGTCTaGAGGAGCCCGTGCACCTTCTCGGCTTTCTGGCCAGTCAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TWRMPRMVAFCLTKV*RSPCTFSAFWPVKW Trigger: CCACTTGACTGGCCAGAAAGCCGAGAAGGTGCACGGGCTCCTCAAGACCTTTGTGAGGCAGAATGCCACCATCCGTGGCATCCGCCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS TCA 72 bp | AGGAGCACCCGTAGAATATGGCGTCACTGCGTCCAGTaGTGTCAGGCCAGGATCCCCTTCCACTTCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSTRRIWRHCVQ*CQARIPFHFLL Trigger: GAGCAGGAAGTGGAAGGGGATCCTGGCCTGACATCACTGGACGCAGTGACGCCATATTCTACGGGTGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS CCA 72 bp | AGTAGCGAGATGCGGTCACCATCCGGAAGGCGTCCATaGATGTCGCTGCCTTCTCACACACCACGTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSEMRSPSGRRP*MSLPSHTPRSS Trigger: GGAAGAACGTGGTGTGTGAGAAGGCAGCGACATCCATGGACGCCTTCCGGATGGTGACCGCATCTCGCTACT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS CAA 72 bp | ATGCCACGGATGGTGGCATTCTGCCTCACAAAGGTCTaGAGGAGCCCGTGCACCTTCTCGGCTTTCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: MPRMVAFCLTKV*RSPCTFSAFWP Trigger: TGGCCAGAAAGCCGAGAAGGTGCACGGGCTCCTCAAGACCTTTGTGAGGCAGAATGCCACCATCCGTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS CAA 90 bp | ATAGACCATACCTTTCAAGTAAAGCAGTGGGACATCCTGGGGACCTaGCTCAGGGAGCCCTGCGCCCACAGCCAGAGAGTCTCTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: IDHTFQVKQWDILGT*LREPCAHSQRVSHQ Trigger: CTGGTGAGAGACTCTCTGGCTGTGGGCGCAGGGCTCCCTGAGCAAGGTCCCCAGGATGTCCCACTGCTTTACTTGAAAGGTATGGTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS TCA 72 bp | GCAGCAAGACGTCGTCTGTGCGGCTGGTGTAGAAGGTaGTGTTCATCTCCTCGGCCAGCTGCTTTGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AARRRLCGWCRR*CSSPRPAALPL Trigger: AAGAGGCAAAGCAGCTGGCCGAGGAGATGAACATCACCTTCTACACCAGCCGCACAGACGACGTCTTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013294.16 ENSMUST00000155038.3 |
||
| CDS TCA 72 bp | ATCTACCACGCTCTGCATATACAGTCCGTCCTCGAATaGGGCAGCCATAGAGACAGGGGTGCGGTCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: IYHALHIQSVLE*GSHRDRGAVPG Trigger: ACCTGGGACCGCACCCCTGTCTCTATGGCTGCCTCATTCGAGGACGGACTGTATATGCAGAGCGTGGTAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS GCA 72 bp | AGCTTCACAACAGGTGCTAGAGCCTTCACGGATATCTaGCGGGTGAGCGGAGGTGGGATGTTGATGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: SFTTGARAFTDI*RVSGGGMLMQT Trigger: GGTCTGCATCAACATCCCACCTCCGCTCACCCGGCAGATATCCGTGAAGGCTCTAGCACCTGTTGTGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||
| CDS GCA 72 bp | ACGTTCTTCCCAATTCCTAGAGCCTTCACGGATATCTaGCGGGTGAGCGGAGGTGGGATGTTGATGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: TFFPIPRAFTDI*RVSGGGMLMQT Trigger: GGTCTGCATCAACATCCCACCTCCGCTCACCCGGCAGATATCCGTGAAGGCTCTAGGAATTGGGAAGAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013294.16 |
||
| CDS TCA 72 bp | ACACACCACGTTCTTCCCAATTCCTCCCAAGCACCCTaGCCCTTGAGCCGTCCACAGAACACTTATCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: THHVLPNSSQAP*PLSRPQNTYHQ Trigger: TTGATGATAAGTGTTCTGTGGACGGCTCAAGGGTCAGGGTGCTTGGGAGGAATTGGGAAGAACGTGGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155038.3 |
||