Pregenerated sensors for GFOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051335Ensembl transcript IDs: ENSMUST00000055341.7, ENSMUST00000222779.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGCACCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTaGAACTGCAGATCCCGAGGGAGGGCAAGCCACCTCCAGCTCCGT | + |
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Preference number: 1 (lower is better) Translates to: RAPHRHQWGIIHSGA*NCRSRGRASHLQLR Trigger: ACGGAGCTGGAGGTGGCTTGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGGTGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR GCA 90 bp | CCTCTACTTAGGACGGGGACCACCCTACATGCTGTGCATTCATGCTaGCCCTTCCATAATCCCCACCCACGGCCACCCACGGCCACCCAC | + |
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Preference number: 1 (lower is better) Translates to: PLLRTGTTLHAVHSC*PFHNPHPRPPTATH Trigger: GTGGGTGGCCGTGGGTGGCCGTGGGTGGGGATTATGGAAGGGGCAGCATGAATGCACAGCATGTAGGGTGGTCCCCGTCCTAAGTAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR GCA 90 bp | CCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTaGAGATCCCGAGGGAGGGCAAGCCACCTCCAGCTCCGTAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: PHRHQWGIIHSGAWN*RSRGRASHLQLRSD Trigger: ATCACTACGGAGCTGGAGGTGGCTTGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR GCA 90 bp | TATTGCTACACCCAGGGTTGCAGGCGCCCCACCCAGGCAGGCAGCTaGAGTTTTAAGCCCATGCCACATGTAGCGGTTCTCAGCGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: YCYTQGCRRPTQAGS*SFKPMPHVAVLSAA Trigger: GGCAGCGCTGAGAACCGCTACATGTGGCATGGGCTTAAAACTGCAGCTGCCTGCCTGGGTGGGGCGCCTGCAACCCTGGGTGTAGCAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CCA 90 bp | TGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTTGCCGCCTCCATaGCTGCCCGTTACTCTATACTGCACTAACAGCAACGAGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: CLPSWSAQRHSLPPP*LPVTLYCTNSNEPG Trigger: ACCTGGCTCGTTGCTGTTAGTGCAGTATAGAGTAACGGGCAGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR TCA 90 bp | AGCAGTACTTATAAAAGGATGGGAGCGAGCAAGGTGAGGGGAAACTaGCTGGAAAGGCTCCTAACAGCCTCTGTAGGCTGGGTTATTGCC | + |
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Preference number: 1 (lower is better) Translates to: SSTYKRMGASKVRGN*LERLLTASVGWVIA Trigger: GGCAATAACCCAGCCTACAGAGGCTGTTAGGAGCCTTTCCAGTCAGTTTCCCCTCACCTTGCTCGCTCCCATCCTTTTATAAGTACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CCA 90 bp | GGAGTGGTGCACTTTTCCTGCAGGTTCCTAAAGCAAAACACACAGTaGCTTCCCGGAATTACAACTTTCTCAAAGGCTCGCCCTTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: GVVHFSCRFLKQNTQ*LPGITTFSKARPSH Trigger: GTGGGAAGGGCGAGCCTTTGAGAAAGTTGTAATTCCGGGAAGCCACTGTGTGTTTTGCTTTAGGAACCTGCAGGAAAAGTGCACCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR TCA 90 bp | TGTCAGAATCCTGAGAGCCAAGGCCAAAGGCAAGGAAAAGAGCCTTaGGTCTTCTTAAAGGGAAAGGGACTCTATGGGGTGAAGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: CQNPESQGQRQGKEP*VFLKGKGLYGVKPQ Trigger: CTGTGGCTTCACCCCATAGAGTCCCTTTCCCTTTAAGAAGACTCAAGGCTCTTTTCCTTGCCTTTGGCCTTGGCTCTCAGGATTCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CCA 90 bp | CTAAATGTCTTTCTTCAGCTTGGCAGTTGGAGCTTACAGCGACTCTaGGGCTGGCCTCATGTTTCCTTCTTTTGGGGCGCTCATATTGCT | + |
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Preference number: 1 (lower is better) Translates to: LNVFLQLGSWSLQRL*GWPHVSFFWGAHIA Trigger: AGCAATATGAGCGCCCCAAAAGAAGGAAACATGAGGCCAGCCCCAGAGTCGCTGTAAGCTCCAACTGCCAAGCTGAAGAAAGACATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR GCA 90 bp | TGTAGGCTGGGTTATTGCCAGGACTTACTTAGATCCAAGTTGTTCTaGAGAATGTTGTCAAGAGCTTGGGGCTTCAGCCTCACACTGCTC | + |
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Preference number: 1 (lower is better) Translates to: CRLGYCQDLLRSKLF*RMLSRAWGFSLTLL Trigger: GAGCAGTGTGAGGCTGAAGCCCCAAGCTCTTGACAACATTCTGCAGAACAACTTGGATCTAAGTAAGTCCTGGCAATAACCCAGCCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CCA 90 bp | GCAAGGAAAAGAGCCTTGAGTCTTCTTAAAGGGAAAGGGACTCTATaGGGTGAAGCCACAGGCTTCTTGTTTAAGTCTACAAAGCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: ARKRALSLLKGKGTL*GEATGFLFKSTKLA Trigger: GGCCAGCTTTGTAGACTTAAACAAGAAGCCTGTGGCTTCACCCCATAGAGTCCCTTTCCCTTTAAGAAGACTCAAGGCTCTTTTCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CCA 90 bp | GACTTACTTAGATCCAAGTTGTTCTGCAGAATGTTGTCAAGAGCTTaGGGCTTCAGCCTCACACTGCTCCAGCCAATCAAGAATGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: DLLRSKLFCRMLSRA*GFSLTLLQPIKNVH Trigger: GTGCACATTCTTGATTGGCTGGAGCAGTGTGAGGCTGAAGCCCCAAGCTCTTGACAACATTCTGCAGAACAACTTGGATCTAAGTAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CCA 90 bp | TTCTTCCAAAGAATACATATTCTTTCCATAGCCCCCAGCCTCAAATaGGAGTTTTTGTATAAACCCTGCATGTGCATCACAGAGCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: FFQRIHILSIAPSLK*EFLYKPCMCITELQ Trigger: TTGGAGCTCTGTGATGCACATGCAGGGTTTATACAAAAACTCCCATTTGAGGCTGGGGGCTATGGAAAGAATATGTATTCTTTGGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR GCA 90 bp | CTTGCAGATTCCCCGCAGGGACAATTATTGAATCATTTGAAGATATaGAGATCAGAAATACAGGCAGTAGTGTCCTTTCTTCTTTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LADSPQGQLLNHLKI*RSEIQAVVSFLLSK Trigger: CTTTGAAAGAAGAAAGGACACTACTGCCTGTATTTCTGATCTGCATATCTTCAAATGATTCAATAATTGTCCCTGCGGGGAATCTGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCAAGCCACCTCCAGCTCCCTCAGAGGCACAGCTTaGCGCCTCCATGGCTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: TQEPGTADPEGGQATSSSLRGTA*RLHGCP Trigger: CGGGCAGCCATGGAGGCGGCAAGCTGTGCCTCTGAG...GGAGCTGGAGGTGGCTTGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CAA 90 bp | CTCAACTGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTGTaGCTCCTTGAGGTGGGAGCACGCCCCCTACAGGGCTCCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: LNCGCCGPQATPLIL*LLEVGARPLQGSMR Trigger: CCTCATGGAGCCCTGTAGGGGGCGTGCTCCCACCTCAAGGAGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCAGGGGACCACCCTACATaGTGTGCATTCATGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: QWGIIHSGAWNCRSRGRAGDHPT*CAFMLP Trigger: GGGCAGCATGAATGCACAGCATGTAGGGTGGTCCCC...TGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCAAGCCACCTCCAGCTCCGAAGGCCAAGGTCTGTaGATGGATGAGGTAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: TQEPGTADPEGGQATSSSEGQGL*MDEVGQ Trigger: TTGCCCTACCTCATCCATCCACAGACCTTGGCCTTC...GGAGCTGGAGGTGGCTTGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCAAGCCACCTCCAGCTCCCACTCTGTTCTCTGCTaGCGTAAACAAGGGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TQEPGTADPEGGQATSSSHSVLC*RKQGAA Trigger: TGCAGCCCCTTGTTTACGCCAGCAGAGAACAGAGTG...GGAGCTGGAGGTGGCTTGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCAAGCCACCTCCAGCTCCTTGAGGTTGGAGGTATaGCTGAGCGGTAGAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: TQEPGTADPEGGQATSSSLRLEV*LSGREL Trigger: AAGCTCTCTACCGCTCAGCCATACCTCCAACCTCAA...GGAGCTGGAGGTGGCTTGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | CCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCCAGCAACCAAGGGAGTaGTGCACTTTTCCTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PHRHQWGIIHSGAWNCRSQQPRE*CTFPAG Trigger: ACCTGCAGGAAAAGTGCACCACTCCCTTGGTTGCTG...GGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CAA 90 bp | CAGCCACCCCTGCTGAAGGAGGACTCTGAAGTAGCTCATTGTAGCTaGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTTGCCGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QPPLLKEDSEVAHCS*FAILVSSEAQLAAS Trigger: GGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAGCTACAATGAGCTACTTCAGAGTCCTCCTTCAGCAGGGGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | TGGCATCCTGCTCAACTGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTGCATTTCCTCCTAACTaGCCCCACGCAGCAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: WHPAQLWLLWTPGHASYTAFPPN*PHAANR Trigger: CCTGTTTGCTGCGTGGGGCCAGTTAGGAGGAAATGC...AGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTGAGCAGGATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTGTTGCTCCTTGAGGTGAGCTTACAGCGACTCTaGGGCTGGCCTCATGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CGCCGPQATPLILLLLEVSLQRL*GWPHVS Trigger: GGAAACATGAGGCCAGCCCCAGAGTCGCTGTAAGCT...CACCTCAAGGAGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | TGGCATCCTGCTCAACTGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTTGGAAAGGCAGGAGCTaGAGGAGCATGAAAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: WHPAQLWLLWTPGHASYTWKGRS*RSMKEA Trigger: GGCTTCTTTCATGCTCCTTCAGCTCCTGCCTTTCCA...AGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTGAGCAGGATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR GCA 90 bp | CCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCGTGTGCCGCCATTTTTaGTTTCAGAGAACTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PHRHQWGIIHSGAWNCRSVCRHF*FQRTAS Trigger: AGAGGCAGTTCTCTGAAAGCAAAAATGGCGGCACAC...GGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCAACCCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCCTGCCTGGTGAGGGTTaGCAAAGCCAGCCAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LPNPESKEVGGHGHCVPPLPGEG*QSQPRK Trigger: TTTCCTTGGCTGGCTTTGCCAACCCTCACCAGGCAG...GGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | CCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCACTATTCATGAGGGGTaGCAGCAAATCAAAGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: PHRHQWGIIHSGAWNCRSTIHEG*QQIKAS Trigger: CGAGGCTTTGATTTGCTGCCACCCCTCATGAATAGT...GGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | GAGCTAGCAGAATACAAGTGCTGGGGATGGCTCTGGAGCCATACTTCAGACTTCCAACTGTGGCTGTTGTaGACCCCAGGCCACGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ELAEYKCWGWLWSHTSDFQLWLL*TPGHAS Trigger: AGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTG...GAAGTCTGAAGTATGGCTCCAGAGCCATCCCCAGCACTTGTATTCTGCTAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | CTCCCCAACCCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCCAATATGACTGTCTCTaGATTACCAGGGCCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LPNPESKEVGGHGHCVPPQYDCL*ITRAPG Trigger: CCCTGGGGCCCTGGTAATTCAGAGACAGTCATATTG...GGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR GCA 90 bp | CCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCCCTAGCCTCCAGAGATaGATAATTAGAGATTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PHRHQWGIIHSGAWNCRSPSLQR*IIRDCP Trigger: AGGGCAATCTCTAATTATGCATCTCTGGAGGCTAGG...GGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CAA 90 bp | CTCATTGTAGCTTGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTaGCCGCCTCCATGGCTGCCCGTTACTCTATACTGCACTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: LIVACLPSWSAQRHS*PPPWLPVTLYCTNS Trigger: GCTGTTAGTGCAGTATAGAGTAACGGGCAGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAGCTACAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CAA 90 bp | CCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCTaGGGTGTCTTCTTCCTATGCCCCACAACCAAGTCCAAGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: PESKEVGGHGHCVPP*GVFFLCPTTKSKTA Trigger: GGCTGTCTTGGACTTGGTTGTGGGGCATAGGAAGAAGACACCCAAGGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | GAGCTAGCAGAATACAAGTGCTGGGGATGGCTCTGGAGCCATACTTCAGACTTCAGCTTGCCGCCTCCATaGCTGCCCGTTACTCTATAC | + |
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Preference number: 2 (lower is better) Translates to: ELAEYKCWGWLWSHTSDFSLPPP*LPVTLY Trigger: GTATAGAGTAACGGGCAGCCATGGAGGCGGCAAGCT...GAAGTCTGAAGTATGGCTCCAGAGCCATCCCCAGCACTTGTATTCTGCTAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGTAGTGCAATGCGTCAGTCGCCTGGAAGAGAGCCAGAGGCTTCAGTGGCCCCAAGGAAAAGAGCCTTaGGTCTTCTTAAAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SVVQCVSRLEESQRLQWPQGKEP*VFLKGK Trigger: CTTTCCCTTTAAGAAGACTCAAGGCTCTTTTCCTTG...GGGCCACTGAAGCCTCTGGCTCTCTTCCAGGCGACTGACGCATTGCACTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGTAGTGCAATGCGTCAGTCGCCTGGAAGAGAGCCAGAGGCTTCAGTGGCCCACAAATAGGATTGTCTaGCAGGTACTTAGTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVVQCVSRLEESQRLQWPTNRIV*QVLSSP Trigger: TGGGGAACTAAGTACCTGTCAGACAATCCTATTTGT...GGGCCACTGAAGCCTCTGGCTCTCTTCCAGGCGACTGACGCATTGCACTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCAACCCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCAGCCAATCAAGAATGTaGACATGGAAAGGCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LPNPESKEVGGHGHCVPPSQSRM*TWKGRS Trigger: GCTCCTGCCTTTCCATGTGCACATTCTTGATTGGCT...GGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTGTTGCTCCTTGAGGTGTTTGATACACAGCCTTaGCTTGCAAAGAAGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: CGCCGPQATPLILLLLEVFDTQP*LAKKAK Trigger: CTTGGCCTTCTTTGCAAGCCAAGGCTGTGTATCAAA...CACCTCAAGGAGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAACACTATTCATGAGGGGTGGCAGCAAATCAAAGCCTCGGAAGGTTTCACAGCGACTCTGGGGCTaGCCTCATGTTTCCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PGTLFMRGGSKSKPRKVSQRLWG*PHVSFF Trigger: AAAGAAGGAAACATGAGGCCAGCCCCAGAGTCGCTG...TGAAACCTTCCGAGGCTTTGATTTGCTGCCACCCCTCATGAATAGTGTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGTAGTGCAATGCGTCAGTCGCCTGGAAGAGAGCCAGAGGCTTCAGTGGCCCGGCTATGTGCCCTGTTaGCTTTTTGTTTTAATACCT | + |
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Preference number: 2 (lower is better) Translates to: SVVQCVSRLEESQRLQWPGYVPC*LFVLIP Trigger: AGGTATTAAAACAAAAAGCCAACAGGGCACATAGCC...GGGCCACTGAAGCCTCTGGCTCTCTTCCAGGCGACTGACGCATTGCACTACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGGACTTACTTAGATCCAAGTTGTTCTGCAGAATGTTGTCAAGAGCTTGGGGAGCTGAAGGAGCATaGAAGAAGCCCCTAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CQDLLRSKLFCRMLSRAWGAEGA*KKPLAL Trigger: CAGGGCTAGGGGCTTCTTTCATGCTCCTTCAGCTCC...CCAAGCTCTTGACAACATTCTGCAGAACAACTTGGATCTAAGTAAGTCCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCAGGTGGCACTGTACCTTaGGTGCTGACGAGACCTGAC | + |
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Preference number: 2 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPGGTVP*VLTRPD Trigger: GTCAGGTCTCGTCAGCACTCAAGGTACAGTGCCACC...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCACAGCTGTCAGAATCCTaGGAGCCAAGGCCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPQLSES*EPRPKA Trigger: TGCCTTTGGCCTTGGCTCTCAGGATTCTGACAGCTG...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR CAA 90 bp | ATGAGGAATGCTTTCCCGGCCAGAACAACAAGTACAGACAGCGATTaGCTCACTCATTGTGTGGCTTTGGGCATGTCACATCTTCATGTA | + |
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Preference number: 2 (lower is better) Translates to: MRNAFPARTTSTDSD*LTHCVALGMSHLHV Trigger: TACATGAAGATGTGACATGCCCAAAGCCACACAATGAGTGAGCAAATCGCTGTCTGTACTTGTTGTTCTGGCCGGGAAAGCATTCCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR TCA 90 bp | AACACTGAGGGCTATGTGCCCTGTTGGCTTTTTGTTTTAATACCTATTCAGAAGTCTTGGCAGAACTGTTaGTCCACAGCCACCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: NTEGYVPCWLFVLIPIQKSWQNC*STATPA Trigger: AGCAGGGGTGGCTGTGGATCAACAGTTCTGCCAAGA...CTTCTGAATAGGTATTAAAACAAAAAGCCAACAGGGCACATAGCCCTCAGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCATACACAGCCTTGGCTTaGAAAGAAGGCCAAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPYTALA*KEGQGL Trigger: CAGACCTTGGCCTTCTTTGCAAGCCAAGGCTGTGTA...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCAATGTTGTCAAGAGCTTaGGGCTTCAGCCTCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPMLSRA*GFSLTL Trigger: CAGTGTGAGGCTGAAGCCCCAAGCTCTTGACAACAT...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR GCA 90 bp | TGCCAGGACTTACTTAGATCCAAGTTGTTCTGCAGAATGTTGTCAAGAGCTTGGTTGCTTTCAGAGAACTaGCTCTCCATCTGTCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: CQDLLRSKLFCRMLSRAWLLSEN*LSICPT Trigger: AGTGGGACAGATGGAGAGGCAGTTCTCTGAAAGCAA...CCAAGCTCTTGACAACATTCTGCAGAACAACTTGGATCTAAGTAAGTCCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR GCA 90 bp | AGAATACATATTCTTTCCATAGCCCCCAGCCTCAAATGGGAGTTTTTGTATAAACAACCAAGGGAGTGGTaGACTTTTCCTGCAGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RIHILSIAPSLKWEFLYKQPREW*TFPAGS Trigger: GGAACCTGCAGGAAAAGTGCACCACTCCCTTGGTTG...TTTATACAAAAACTCCCATTTGAGGCTGGGGGCTATGGAAAGAATATGTATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTCTCATGCTTCTTCCAAAGAATACATATTCTTTCCATAGCCCCCAGCCTCAAAATGTATGTGACTTaGTCTTTCTCTCAAGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLSCFFQRIHILSIAPSLKMYVT*SFSQDQ Trigger: CTGGTCTTGAGAGAAAGAGCAAGTCACATACATTTT...GAGGCTGGGGGCTATGGAAAGAATATGTATTCTTTGGAAGAAGCATGAGAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 90 bp | TTCAAAATACAATGGGTCCTTGCAGATTCCCCGCAGGGACAATTATaGAATCATTTGAAGATATGCAGATCAGAAATACAGGCAGTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FKIQWVLADSPQGQL*NHLKICRSEIQAVV Trigger: CACTACTGCCTGTATTTCTGATCTGCATATCTTCAAATGATTCAATAATTGTCCCTGCGGGGAATCTGCAAGGACCCATTGTATTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACACATATTATATATATATATACCTGCTTTAAAATCTCTGGGAACCCTGGCGTGTGGCCTCCAATATaGCTGTCTCTGAATTACCAG | + |
|
Preference number: 2 (lower is better) Translates to: HTHIIYIYTCFKISGNPGVWPPI*LSLNYQ Trigger: CTGGTAATTCAGAGACAGTCATATTGGAGGCCACAC...GCCAGGGTTCCCAGAGATTTTAAAGCAGGTATATATATATATAATATGTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | CACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTaGAGATCCCGAGGGAGGGCAAGCCACCTCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HQWGIIHSGAWN*RSRGRASHLQL Trigger: GAGCTGGAGGTGGCTTGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | GGACAGGGGAAGCGATGTCAGAGCAGCCGGGGCAGCTaGCTGAGCATGTCGACCCTGATCCAGAGCACCACA | + |
|
Preference number: 3 (lower is better) Translates to: GQGKRCQSSRGS*LSMSTLIQSTT Trigger: TGTGGTGCTCTGGATCAGGGTCGACATGCTCAGCCAGCTGCCCCGGCTGCTCTGACATCGCTTCCCCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | ACCCAGGGTTGCAGGCGCCCCACCCAGGCAGGCAGCTaGAGTTTTAAGCCCATGCCACATGTAGCGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TQGCRRPTQAGS*SFKPMPHVAVL Trigger: GAGAACCGCTACATGTGGCATGGGCTTAAAACTGCAGCTGCCTGCCTGGGTGGGGCGCCTGCAACCCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | CACGGCCACCCACTCCACAGTGCATTTCCTCCTAACTaGCCCCACGCAGCAAACAGGTCAAGTCCACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HGHPLHSAFPPN*PHAANRSSPPG Trigger: ACCTGGTGGACTTGACCTGTTTGCTGCGTGGGGCCAGTTAGGAGGAAATGCACTGTGGAGTGGGTGGCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCAATACACAGCCTTGGCTaGCAAAGAAGGCCAAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QWGIIHSGAWNCRSRGRAIHSLG*QRRPRS Trigger: AGACCTTGGCCTTCTTTGCAAGCCAAGGCTGTGTAT...TGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR TCA 72 bp | TCCTTGAGGTGGGAGCACGCCCCCTACAGGGCTCCATaGGGAATGCTTTCCCGGCCAGAACAACAAGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLRWEHAPYRAP*GMLSRPEQQVQ Trigger: CTGTACTTGTTGTTCTGGCCGGGAAAGCATTCCTCATGGAGCCCTGTAGGGGGCGTGCTCCCACCTCAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | GGTCAGCTCAGAGGCACAGCTTGCCGCCTCCATGGCTaGCCGTTACTCTATACTGCACTAACAGCAACGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GQLRGTACRLHG*PLLYTALTATS Trigger: GCTCGTTGCTGTTAGTGCAGTATAGAGTAACGGGCAGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | TTTTCTGCAGCTGTAACTGCCAACCTGCTGGCATCCTaGTCAACTGTGGCTGTTGTGGACCCCAGGCCACGC | + |
|
Preference number: 3 (lower is better) Translates to: FSAAVTANLLAS*STVAVVDPRPR Trigger: GCGTGGCCTGGGGTCCACAACAGCCACAGTTGAGCAGGATGCCAGCAGGTTGGCAGTTACAGCTGCAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | GGGCTGCAGCAGACTTCAGGGAACTCAGTAGTGCAATaGGTCAGTCGCCTGGAAGAGAGCCAGAGGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLQQTSGNSVVQ*VSRLEESQRLQ Trigger: CTGAAGCCTCTGGCTCTCTTCCAGGCGACTGACGCATTGCACTACTGAGTTCCCTGAAGTCTGCTGCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | CAGCGACTCTGGGGCTGGCCTCATGTTTCCTTCTTTTaGGGCGCTCATATTGCTACACCCAGGGTTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QRLWGWPHVSFF*GAHIATPRVAG Trigger: GCCTGCAACCCTGGGTGTAGCAATATGAGCGCCCCAAAAGAAGGAAACATGAGGCCAGCCCCAGAGTCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | CCAACCTGCTGGCATCCTGCTCAACTGTGGCTGTTGTaGACCCCAGGCCACGCCTCTTATACTGTTGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PTCWHPAQLWLL*TPGHASYTVAP Trigger: AGGAGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTGAGCAGGATGCCAGCAGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR TCA 72 bp | TCTGCTGGTGTGTGTGGCCTCCAATATGACTGTCTCTaGATTACCAGGGCCCCAGGGAGGAACGCTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SAGVCGLQYDCL*ITRAPGRNADW Trigger: CCAGTCAGCGTTCCTCCCTGGGGCCCTGGTAATTCAGAGACAGTCATATTGGAGGCCACACACACCAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR TCA 72 bp | GCCGGGTGGCACTGTACCTTGAGTGCTGACGAGACCTaGCCCAGAGATGTGCTGCCAGGAAAACTAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: AGWHCTLSADET*PRDVLPGKLRC Trigger: GCATCTTAGTTTTCCTGGCAGCACATCTCTGGGTCAGGTCTCGTCAGCACTCAAGGTACAGTGCCACCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | CTTGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTTaGCGCCTCCATGGCTGCCCGTTACTCTATACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVCHLGQLRGTA*RLHGCPLLYTA Trigger: TGCAGTATAGAGTAACGGGCAGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | CTGGACGCTGACCGGAGTGAGCTAGCAGAATACAAGTaGTGGGGATGGCTCTGGAGCCATACTTCAGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: LDADRSELAEYK*WGWLWSHTSDF Trigger: GAAGTCTGAAGTATGGCTCCAGAGCCATCCCCAGCACTTGTATTCTGCTAGCTCACTCCGGTCAGCGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | TCTTGGTCAGCTCAGAGGCACAGCTTGCCGCCTCCATaGCTGCCCGTTACTCTATACTGCACTAACAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SWSAQRHSLPPP*LPVTLYCTNSN Trigger: GTTGCTGTTAGTGCAGTATAGAGTAACGGGCAGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTAGTGCAATGCGTCAGTCGCCTGGAAGAGAGCCAGAGGCTTCAGTGGCCCCTCGGAAGGTTTCAGTaGACTGACTTTACCACGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SVVQCVSRLEESQRLQWPLGRFQ*TDFTTL Trigger: CAACGTGGTAAAGTCAGTCAACTGAAACCTTCCGAG...GGGCCACTGAAGCCTCTGGCTCTCTTCCAGGCGACTGACGCATTGCACTACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | CCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCTCAGATCATAGGCTTTaGCTTCTTCACCTGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: PHRHQWGIIHSGAWNCRSSDHRL*LLHLGC Trigger: ACATCCCAGGTGAAGAAGCAAAAGCCTATGATCTGA...GGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR TCA 72 bp | AGGGCAAGCCACCTCCAGCTCCGTAGTGATTTGCCTTaGGAACACCAAGCACAGCTGCAGTCACTGTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RASHLQLRSDLP*EHQAQLQSLSF Trigger: AAAGGACAGTGACTGCAGCTGTGCTTGGTGTTCTCAAGGCAAATCACTACGGAGCTGGAGGTGGCTTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | GGAAAAATGGGCTCCCCAACCCTGAATCTAAAGAAGTaGGTGGCCATGGCCATTGTGTTCCTCCCTTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GKMGSPTLNLKK*VAMAIVFLPWV Trigger: CACCCAAGGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAGCCCATTTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTGTTGCTCCTTGAGGTGACCCTATGTAGGCATTaGATGAAATGCCCTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGCCGPQATPLILLLLEVTLCRH*MKCPLL Trigger: CAGGAGAGGGCATTTCATCAAATGCCTACATAGGGT...CACCTCAAGGAGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR TCA 72 bp | CTGACAGAGAGCCTAGCTCTGGCTGAGCTCCTCATTTaGTACACAGCCTTGGCTTGCAAAGAAGGCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTESLALAELLI*YTALACKEGQG Trigger: ACCTTGGCCTTCTTTGCAAGCCAAGGCTGTGTATCAAATGAGGAGCTCAGCCAGAGCTAGGCTCTCTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR GCA 72 bp | ATGAAAGAAGCCCCTAGCCCTGTGTGCCGCCATTTTTaGTTTCAGAGAACTGCCTCTCCATCTGTCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: MKEAPSPVCRHF*FQRTASPSVPL Trigger: GAGTGGGACAGATGGAGAGGCAGTTCTCTGAAAGCAAAAATGGCGGCACACAGGGCTAGGGGCTTCTTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR GCA 72 bp | GGCCATTGTGTTCCTCCCTTGGGTGTCTTCTTCCTATaGCCCACAACCAAGTCCAAGACAGCCAATGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: GHCVPPLGVFFL*PTTKSKTANDA Trigger: AGCATCATTGGCTGTCTTGGACTTGGTTGTGGGGCATAGGAAGAAGACACCCAAGGGAGGAACACAATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTTCCTTAAAGGACAACACCTGCCTCTTTACACTAGCGAAGGACCATGATTTTGGGGCGCTCATATaGCTACACCCAGGGTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GASLKDNTCLFTLAKDHDFGALI*LHPGLQ Trigger: CTGCAACCCTGGGTGTAGCAATATGAGCGCCCCAAA...ATCATGGTCCTTCGCTAGTGTAAAGAGGCAGGTGTTGTCCTTTAAGGAAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCAACCCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCTTGTTCTGCAGAATGTaGTCAAGAGCTTGGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPNPESKEVGGHGHCVPPLFCRM*SRAWGF Trigger: GAAGCCCCAAGCTCTTGACAACATTCTGCAGAACAA...GGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCAACCCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCCTCAAATGGGAGTTTTaGTATAAACCCTGCATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPNPESKEVGGHGHCVPPLKWEF*YKPCMC Trigger: GCACATGCAGGGTTTATACAAAAACTCCCATTTGAG...GGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | CTTTCCCGGCCAGAACAACAAGTACAGACAGCGATTTaGTCACTCATTGTGTGGCTTTGGGCATGTCACATC | + |
|
Preference number: 3 (lower is better) Translates to: LSRPEQQVQTAI*SLIVWLWACHI Trigger: GATGTGACATGCCCAAAGCCACACAATGAGTGAGCAAATCGCTGTCTGTACTTGTTGTTCTGGCCGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | CCACTCGAATGTTGTTCTTATCACTCTGTTCTCTGCTaGCGTAAACAAGGGGCTGCAGCAGACTTCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PLECCSYHSVLC*RKQGAAADFRE Trigger: TTCCCTGAAGTCTGCTGCAGCCCCTTGTTTACGCCAGCAGAGAACAGAGTGATAAGAACAACATTCGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR GCA 72 bp | GGTTATTGCCAGGACTTACTTAGATCCAAGTTGTTCTaGAGAATGTTGTCAAGAGCTTGGGGCTTCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GYCQDLLRSKLF*RMLSRAWGFSL Trigger: GAGGCTGAAGCCCCAAGCTCTTGACAACATTCTGCAGAACAACTTGGATCTAAGTAAGTCCTGGCAATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | CACTTTTCCTGCAGGTTCCTAAAGCAAAACACACAGTaGCTTCCCGGAATTACAACTTTCTCAAAGGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: HFSCRFLKQNTQ*LPGITTFSKAR Trigger: GCGAGCCTTTGAGAAAGTTGTAATTCCGGGAAGCCACTGTGTGTTTTGCTTTAGGAACCTGCAGGAAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGGACTTACTTAGATCCAAGTTGTTCTGCAGAATGTTGTCAAGAGCTTGGATGTCTTTCTTCAGCTaGGCAGTTGGAGCTTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CQDLLRSKLFCRMLSRAWMSFFS*AVGAYS Trigger: GCTGTAAGCTCCAACTGCCAAGCTGAAGAAAGACAT...CCAAGCTCTTGACAACATTCTGCAGAACAACTTGGATCTAAGTAAGTCCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCTTCCTTAAAGGACAACACCTGCCTCTTTACACTAGCGAAGGACCATGATCAAAATGTATGTGACTaGCTCTTTCTCTCAAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: GASLKDNTCLFTLAKDHDQNVCD*LFLSRP Trigger: TGGTCTTGAGAGAAAGAGCAAGTCACATACATTTTG...ATCATGGTCCTTCGCTAGTGTAAAGAGGCAGGTGTTGTCCTTTAAGGAAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | AGAGCCTTGAGTCTTCTTAAAGGGAAAGGGACTCTATaGGGTGAAGCCACAGGCTTCTTGTTTAAGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: RALSLLKGKGTL*GEATGFLFKST Trigger: TGTAGACTTAAACAAGAAGCCTGTGGCTTCACCCCATAGAGTCCCTTTCCCTTTAAGAAGACTCAAGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCAGAAGCCACAGGCTTCTaGTTTAAGTCTACAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPEATGF*FKSTKL Trigger: CAGCTTTGTAGACTTAAACAAGAAGCCTGTGGCTTC...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CCA 72 bp | AGAATACATATTCTTTCCATAGCCCCCAGCCTCAAATaGGAGTTTTTGTATAAACCCTGCATGTGCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: RIHILSIAPSLK*EFLYKPCMCIT Trigger: TGTGATGCACATGCAGGGTTTATACAAAAACTCCCATTTGAGGCTGGGGGCTATGGAAAGAATATGTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR-3UTR CAA 90 bp | CACACACATATTATATATATATATACCTGCTTTAAAATCTCTGGGAACCCTGGCGCAAGGAAAAGAGCCTaGAGTCTTCTTAAAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HTHIIYIYTCFKISGNPGARKRA*SLLKGK Trigger: TTTCCCTTTAAGAAGACTCAAGGCTCTTTTCCTTGC...GCCAGGGTTCCCAGAGATTTTAAAGCAGGTATATATATATATAATATGTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCACGGCTTCTTCCTGCGTaGGGCCCCACAGCGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QWGIIHSGAWNCRSRGRARLLPA*GPTAPS Trigger: TGAAGGCGCTGTGGGGCCGCACGCAGGAAGAAGCCG...TGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR TCA 90 bp | CCACATCGGCACCAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCGTGCGCCGGTCATCTTaGTCCTGGAAGGCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHRHQWGIIHSGAWNCRSVRRSS*SWKAWR Trigger: GCGCCAGGCCTTCCAGGATCAAGATGACCGGCGCAC...GGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTGGTGCCGATGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CTCCCCAACCCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCTCCTCGGCTTCTTCCTaGGTGCGGCCCCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPNPESKEVGGHGHCVPPSSASS*VRPHSA Trigger: GGCGCTGTGGGGCCGCACGCAGGAAGAAGCCGAGGA...GGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR TCA 90 bp | TGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTGTTGCTCCTTGAGGTGGCGGCGGCGGCAGGTTaGTGCACACCAAGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CGCCGPQATPLILLLLEVAAAAG*CTPSPH Trigger: ATGTGGACTTGGTGTGCATCAACCTGCCGCCGCCGC...CACCTCAAGGAGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGAATTACCAGGGCCCCAGGGAGGAACGCTGACTGGACTCAGGCCGACTCTGGCTCCTCGGTCATaGTGGCGATGTTCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VSELPGPQGGTLTGLRPTLAPRS*WRCSAT Trigger: AGTGGCAGAACATCGCCATCATGACCGAGGAGCCAG...AGTCGGCCTGAGTCCAGTCAGCGTTCCTCCCTGGGGCCCTGGTAATTCAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTTCCCGGAATTACAACTTTCTCAAAGGCTCGCCCTTCCCACCCCCACCGGCAGGGCTCAGCTCTaGCTCCTCGGTCATGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGFPELQLSQRLALPTPTGRAQL*LLGHDG Trigger: GCCATCATGACCGAGGAGCCAGAGCTGAGCCCTGCC...GGTGGGGGTGGGAAGGGCGAGCCTTTGAGAAAGTTGTAATTCCGGGAAGCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CTCCCCAACCCTGAATCTAAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCAGCAGACTACCGCTGTaGACCTGCACCTCGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LPNPESKEVGGHGHCVPPSRLPL*TCTSHT Trigger: GGTGTGCGAGGTGCAGGTGCACAGCGGTAGTCTGCT...GGGAGGAACACAATGGCCATGGCCACCCACTTCTTTAGATTCAGGGTTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | AGCTTGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTTGCCGCCTCCATGGCTGGGGATGTCGCTGAATaGCTTCTCAGGCAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLFAILVSSEAQLAASMAGDVAE*LLRQQG Trigger: TCCCTGCTGCCTGAGAAGGCATTCAGCGACATCCCC...AGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | CTGCCAACCTGCTGGCATCCTGCTCAACTGTGGCTGTaGTGGACCCCAGGCCACGCCTCTTATACTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTCWHPAQLWL*WTPGHASYTVA Trigger: AGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTGAGCAGGATGCCAGCAGGTTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR CCA 90 bp | TCAGTAGTGCAATGCGTCAGTCGCCTGGAAGAGAGCCAGAGGCTTCAGTGGCCCCCCTCCAGCACCATCTaGAAGGTGCAGAAGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVVQCVSRLEESQRLQWPPSSTI*KVQKSS Trigger: TGATGACTTCTGCACCTTCCAGATGGTGCTGGAGGG...GGGCCACTGAAGCCTCTGGCTCTCTTCCAGGCGACTGACGCATTGCACTACTGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CCA 90 bp | AGCTTGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTTGCCGCCTCCATGGCTTGCCACTCTCCAGTCTaGCTGGACCTCTTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFAILVSSEAQLAASMACHSPV*LDLLMV Trigger: CACCATCAAGAGGTCCAGCCAGACTGGAGAGTGGCA...AGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | ACAGCGACTCTGGGGCTGGCCTCATGTTTCCTTCTTTaGGGGCGCTCATATTGCTACACCCAGGGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TATLGLASCFLL*GRSYCYTQGCR Trigger: CCTGCAACCCTGGGTGTAGCAATATGAGCGCCCCAAAAGAAGGAAACATGAGGCCAGCCCCAGAGTCGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | TGGCATCCTGCTCAACTGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTATGATGGCGATGTTCTaGCACTCTCCAGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WHPAQLWLLWTPGHASYTMMAMF*HSPVWL Trigger: CAGCCAGACTGGAGAGTGGCAGAACATCGCCATCAT...AGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTGAGCAGGATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTTCCCGGAATTACAACTTTCTCAAAGGCTCGCCCTTCCCACCCCCACCCGGATGCCCTTGATGTaGTCCGTCTGCTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGFPELQLSQRLALPTPTRMPLM*SVCLTK Trigger: CTTTGTCAAGCAGACGGACCACATCAAGGGCATCCG...GGTGGGGGTGGGAAGGGCGAGCCTTTGAGAAAGTTGTAATTCCGGGAAGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR TCA 90 bp | GGGGCTTCCTTAAAGGACAACACCTGCCTCTTTACACTAGCGAAGGACCATGATGCGAGGGGATGTCGCTaGATGCCTTCTCAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GASLKDNTCLFTLAKDHDARGCR*MPSQAA Trigger: TGCTGCCTGAGAAGGCATTCAGCGACATCCCCTCGC...ATCATGGTCCTTCGCTAGTGTAAAGAGGCAGGTGTTGTCCTTTAAGGAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | TCAGTAGTGCAATGCGTCAGTCGCCTGGAAGAGAGCCAGAGGCTTCAGTGGCCCTTGATGTGGTCCGTCTaGTTGACAAAGGTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVVQCVSRLEESQRLQWPLMWSV*LTKVLS Trigger: GCTCAAGACCTTTGTCAAGCAGACGGACCACATCAA...GGGCCACTGAAGCCTCTGGCTCTCTTCCAGGCGACTGACGCATTGCACTACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | AAAGAAGTGGGTGGCCATGGCCATTGTGTTCCTCCCTaGGGTGTCTTCTTCCTATGCCCCACAACCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEVGGHGHCVPP*GVFFLCPTTKS Trigger: GGACTTGGTTGTGGGGCATAGGAAGAAGACACCCAAGGGAGGAACACAATGGCCATGGCCACCCACTTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | GACTCTGAAGTAGCTCATTGTAGCTTGTTTGCCATCTaGGTCAGCTCAGAGGCACAGCTTGCCGCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DSEVAHCSLFAI*VSSEAQLAASM Trigger: CATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAGCTACAATGAGCTACTTCAGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CCTGGAACACTATTCATGAGGGGTGGCAGCAAATCAAAGCCTCGGAAGGTTTCAGAAGGCCTGGCGCACTaGCTGCATCATCTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGTLFMRGGSKSKPRKVSEGLAH*LHHLHG Trigger: ACCATGAAGATGATGCAGGCAGTGCGCCAGGCCTTC...TGAAACCTTCCGAGGCTTTGATTTGCTGCCACCCCTCATGAATAGTGTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CCA 90 bp | GGGGCTTCCTTAAAGGACAACACCTGCCTCTTTACACTAGCGAAGGACCATGATCCTCGTCGATGCGGCTaGTGTAGAAAGGAACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GASLKDNTCLFTLAKDHDPRRCG*CRKERS Trigger: TGAGCGTTCCTTTCTACACCAGCCGCATCGACGAGG...ATCATGGTCCTTCGCTAGTGTAAAGAGGCAGGTGTTGTCCTTTAAGGAAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGACTTACTTAGATCCAAGTTGTTCTGCAGAATGTTGTCAAGAGCTTGGGCATCATCTTCATGGTaGCCCGCAGGTAGGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQDLLRSKLFCRMLSRAWASSSW*PAGRAR Trigger: CCTCGCCCTACCTGCGGGGCACCATGAAGATGATGC...CCAAGCTCTTGACAACATTCTGCAGAACAACTTGGATCTAAGTAAGTCCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR GCA 90 bp | CAATGGGTCCTTGCAGATTCCCCGCAGGGACAATTATTGAATCATTTGAAGATAGTTTTGACAGCGATCTaGCTAGTGAGCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QWVLADSPQGQLLNHLKIVLTAI*LVSGGG Trigger: GCCGCCGCCGCTCACTAGGCAGATCGCTGTCAAAAC...TATCTTCAAATGATTCAATAATTGTCCCTGCGGGGAATCTGCAAGGACCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCAGTCTTGAGCAGCCCGTaGACCTTGACAGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPVLSSP*TLTAFW Trigger: CCAGAAGGCTGTCAAGGTCCACGGGCTGCTCAAGAC...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR CCA 90 bp | CTAAAAGGAAAGCTCTCAAATATCCTGGAGAGAGTAGAGAACCCAGAAATGGAACAGCAGCTCCTGCTCTaGGGCGCTATTGCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKGKLSNILERVENPEMEQQLLL*GAIALS Trigger: GGACAGCGCAATAGCGCCCCAGAGCAGGAGCTGCTG...TTCCATTTCTGGGTTCTCTACTCTCTCCAGGATATTTGAGAGCTTTCCTTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | CTGCTGAAGGAGGACTCTGAAGTAGCTCATTGTAGCTaGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKEDSEVAHCS*FAILVSSEAQL Trigger: AAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAGCTACAATGAGCTACTTCAGAGTCCTCCTTCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | GCTTTCCCGGCCAGAACAACAAGTACAGACAGCGATTaGCTCACTCATTGTGTGGCTTTGGGCATGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AFPARTTSTDSD*LTHCVALGMSH Trigger: ATGTGACATGCCCAAAGCCACACAATGAGTGAGCAAATCGCTGTCTGTACTTGTTGTTCTGGCCGGGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR TCA 90 bp | AACACTGAGGGCTATGTGCCCTGTTGGCTTTTTGTTTTAATACCTATTCAGAAGTGCGCATGGCCTCACTaGTCAGGTAGGCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTEGYVPCWLFVLIPIQKCAWPH*SGRQGS Trigger: TGAGCCCTGCCTACCTGATCAGTGAGGCCATGCGCA...CTTCTGAATAGGTATTAAAACAAAAAGCCAACAGGGCACATAGCCCTCAGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGGAAAGCTCTCAAATATCCTGGAGAGAGTAGAGAACCCAGAAATGGAAGTTTTGACAGCGATCTaGCTAGTGAGCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGKLSNILERVENPEMEVLTAI*LVSGGG Trigger: GCCGCCGCCGCTCACTAGGCAGATCGCTGTCAAAAC...TTCCATTTCTGGGTTCTCTACTCTCTCCAGGATATTTGAGAGCTTTCCTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CCTGGAACACTATTCATGAGGGGTGGCAGCAAATCAAAGCCTCGGAAGGTTTCATCCAGTTGTATTTCTTaGCCAGCAGACTACCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGTLFMRGGSKSKPRKVSSSCIS*PADYRC Trigger: ACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGA...TGAAACCTTCCGAGGCTTTGATTTGCTGCCACCCCTCATGAATAGTGTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR TCA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCATCATCACTGGTGATCTaGCGGATGCCCTTGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPSSLVI*RMPLMW Trigger: CCACATCAAGGGCATCCGTCAGATCACCAGTGATGA...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR GCA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCAAGTAAAGGGACATCCTaGTTCTGCGCATGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPSKGTS*FCAWPH Trigger: GTGAGGCCATGCGCAGAAGCAGGATGTCCCTTTACT...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CCA 90 bp | ACAATGGGTCCTTGCAGATTCCCCGCAGGGACAATTATTGAATCATTTGAAGATCCTCGTCGATGCGGCTaGTGTAGAAAGGAACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TMGPCRFPAGTIIESFEDPRRCG*CRKERS Trigger: TGAGCGTTCCTTTCTACACCAGCCGCATCGACGAGG...ATCTTCAAATGATTCAATAATTGTCCCTGCGGGGAATCTGCAAGGACCCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCGGGTTTCCTCAATCATAGTATGTTTTTATAACTTCAAAAGGACAGGCGCGGCGGCGGCAGGTTaGTGCACACCAAGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FVRVSSIIVCFYNFKRTGAAAAG*CTPSPH Trigger: ATGTGGACTTGGTGTGCATCAACCTGCCGCCGCCGC...GCCTGTCCTTTTGAAGTTATAAAAACATACTATGATTGAGGAAACCCGAACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTCATGCTTCTTCCAAAGAATACATATTCTTTCCATAGCCCCCAGCCTCCGGTACGGTCACAGATaGCATTCTTGCCTATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSCFFQRIHILSIAPSLRYGHR*HSCLFP Trigger: TGGGAATAGGCAAGAATGTCATCTGTGACCGTACCG...GAGGCTGGGGGCTATGGAAAGAATATGTATTCTTTGGAAGAAGCATGAGAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | TCTGACACCTCCCTTGCCCAAAGGAAACAAATAGGATaGTCTGACAGGTACTTAGTTCCCCAGTGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDTSLAQRKQIG*SDRYLVPQCHP Trigger: AGGATGACACTGGGGAACTAAGTACCTGTCAGACAATCCTATTTGTTTCCTTTGGGCAAGGGAGGTGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR TCA 90 bp | AACACTGAGGGCTATGTGCCCTGTTGGCTTTTTGTTTTAATACCTATTCAGAAGTCTGGCTGGACCTCTTaGTGGTGTCTACCACGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTEGYVPCWLFVLIPIQKSGWTS*WCLPRK Trigger: TTTGCGTGGTAGACACCATCAAGAGGTCCAGCCAGA...CTTCTGAATAGGTATTAAAACAAAAAGCCAACAGGGCACATAGCCCTCAGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR GCA 90 bp | CACACACATATTATATATATATATACCTGCTTTAAAATCTCTGGGAACCCTGGCGCCTGGCGCACTGCCTaGATCATCTTCATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHIIYIYTCFKISGNPGAWRTA*IIFMVP Trigger: GGGCACCATGAAGATGATGCAGGCAGTGCGCCAGGC...GCCAGGGTTCCCAGAGATTTTAAAGCAGGTATATATATATATAATATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CAATGGGTCCTTGCAGATTCCCCGCAGGGACAATTATTGAATCATTTGAAGATAAATGTGGCGCTTGCCTaGAATCCCAGGGTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QWVLADSPQGQLLNHLKINVALA*NPRVLT Trigger: TGTCAAAACCCTGGGATTGCAGGCAAGCGCCACATT...TATCTTCAAATGATTCAATAATTGTCCCTGCGGGGAATCTGCAAGGACCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAACACTGAGGGCTATGTGCCCTGTTGGCTTTTTGTTTTAATACCTATTACCAAGTCCACATCCTaGTGCAGGAGCACCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FRNTEGYVPCWLFVLIPITKSTS*CRSTSS Trigger: CGACGAGGTGCTCCTGCACCAGGATGTGGACTTGGT...AATAGGTATTAAAACAAAAAGCCAACAGGGCACATAGCCCTCAGTGTTTCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR CCA 90 bp | CACACACATATTATATATATATATACCTGCTTTAAAATCTCTGGGAACCCTGGCCCTGCATCATCTTCATaGTGCCCCGCAGGTAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HTHIIYIYTCFKISGNPGPASSS*CPAGRA Trigger: CGCCCTACCTGCGGGGCACCATGAAGATGATGCAGG...GCCAGGGTTCCCAGAGATTTTAAAGCAGGTATATATATATATAATATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | ATTCTTTCCATAGCCCCCAGCCTCAAATGGGAGTTTTaGTATAAACCCTGCATGTGCATCACAGAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILSIAPSLKWEF*YKPCMCITELQ Trigger: TTGGAGCTCTGTGATGCACATGCAGGGTTTATACAAAAACTCCCATTTGAGGCTGGGGGCTATGGAAAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CCA 90 bp | AGAATACATATTCTTTCCATAGCCCCCAGCCTCAAATGGGAGTTTTTGTATAAAGAACGCTCATCTCCTTaGCCAGCTCCTCGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHILSIAPSLKWEFLYKERSSP*PAPRLL Trigger: AAGAAGCCGAGGAGCTGGCCAAGGAGATGAGCGTTC...TTTATACAAAAACTCCCATTTGAGGCTGGGGGCTATGGAAAGAATATGTATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | AGTACAGACAGCGATTTGCTCACTCATTGTGTGGCTTaGGGCATGTCACATCTTCATGTATACATAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STDSDLLTHCVA*GMSHLHVYIEG Trigger: TCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGCCACACAATGAGTGAGCAAATCGCTGTCTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| 3UTR CAA 72 bp | GGCAGAATAAAGGAGATCAGATCAGATCATAGGCTTTaGCTTCTTCACCTGGGATGTCACGGAGTACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: GRIKEIRSDHRL*LLHLGCHGVLQ Trigger: TTGTAGTACTCCGTGACATCCCAGGTGAAGAAGCAAAAGCCTATGATCTGATCTGATCTCCTTTATTCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CACACACATATTATATATATATATACCTGCTTTAAAATCTCTGGGAACCCTGGCACCACGGTCACGTCCTaGTTGAACTCTCCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HTHIIYIYTCFKISGNPGTTVTS*LNSPGT Trigger: TGTGCCTGGAGAGTTCAAGCAGGACGTGACCGTGGT...GCCAGGGTTCCCAGAGATTTTAAAGCAGGTATATATATATATAATATGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCGGGTTTCCTCAATCATAGTATGTTTTTATAACTTCAAAAGGACAGGCGAACGCTCATCTCCTTaGCCAGCTCCTCGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVRVSSIIVCFYNFKRTGERSSP*PAPRLL Trigger: AAGAAGCCGAGGAGCTGGCCAAGGAGATGAGCGTTC...GCCTGTCCTTTTGAAGTTATAAAAACATACTATGATTGAGGAAACCCGAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
||
| 3UTR CAA 72 bp | CAGAACAACAAGTACAGACAGCGATTTGCTCACTCATaGTGTGGCTTTGGGCATGTCACATCTTCATGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QNNKYRQRFAHS*CGFGHVTSSCI Trigger: TATACATGAAGATGTGACATGCCCAAAGCCACACAATGAGTGAGCAAATCGCTGTCTGTACTTGTTGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS-3UTR GCA 90 bp | CACACACATATTATATATATATATACCTGCTTTAAAATCTCTGGGAACCCTGGCCAATCAGCTGCTTCATaGGTACGAAGGCTGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHIIYIYTCFKISGNPGQSAAS*VRRLGG Trigger: TCCTCCCAGCCTTCGTACGCATGAAGCAGCTGATTG...GCCAGGGTTCCCAGAGATTTTAAAGCAGGTATATATATATATAATATGTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS GCA 90 bp | GCAGCTCCTGCTCTGGGGCGCTATTGCGCTGTCCATAGAGGTCGGTaGCCACCGCCAGGAGCCGCCCAGCGGAACCCACCACGGTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: AAPALGRYCAVHRGR*PPPGAAQRNPPRSR Trigger: ACGTGACCGTGGTGGGTTCCGCTGGGCGGCTCCTGGCGGTGGGCACCGACCTCTATGGACAGCGCAATAGCGCCCCAGAGCAGGAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS GCA 90 bp | GTCCCACGTGCGCCGGTCATCTTGATCCTGGAAGGCCTGGCGCACTaGCTGCATCATCTTCATGGTGCCCCGCAGGTAGGGCGAGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPRAPVILILEGLAH*LHHLHGAPQVGRGD Trigger: ATCCCCTCGCCCTACCTGCGGGGCACCATGAAGATGATGCAGGCAGTGCGCCAGGCCTTCCAGGATCAAGATGACCGGCGCACGTGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS TCA 90 bp | GCAGCCATGGTAAGAGGCCGGCCGTCCCACGTGCGCCGGTCATCTTaGTCCTGGAAGGCCTGGCGCACTGCCTGCATCATCTTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAMVRGRPSHVRRSS*SWKAWRTACIIFMV Trigger: CACCATGAAGATGATGCAGGCAGTGCGCCAGGCCTTCCAGGATCAAGATGACCGGCGCACGTGGGACGGCCGGCCTCTTACCATGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS GCA 90 bp | AAGGAACGCTCATCTCCTTGGCCAGCTCCTCGGCTTCTTCCTGCGTaGGGCCCCACAGCGCCTTCACCGCGAAGCCCTCATCTTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KERSSPWPAPRLLPA*GPTAPSPRSPHLSA Trigger: TGCTGAAAGATGAGGGCTTCGCGGTGAAGGCGCTGTGGGGCCGCACGCAGGAAGAAGCCGAGGAGCTGGCCAAGGAGATGAGCGTTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
||
| CDS GCA 90 bp | GGCCGCCACCACCCATCAGGTCGTCGCAGCTCCAGTTGTATTTCTTaGCCAGCAGACTACCGCTGTGCACCTGCACCTCGCACACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRHHPSGRRSSSCIS*PADYRCAPAPRTPA Trigger: TGCTGGTGTGCGAGGTGCAGGTGCACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAGCTGCGACGACCTGATGGGTGGTGGCGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | TGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTGTTGCTCCTTGAGGTGAGCAGCCCGTGGACCTaGACAGCCTTCTGGCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: CGCCGPQATPLILLLLEVSSPWT*TAFWPV Trigger: CACGGGCCAGAAGGCTGTCAAGGTCCACGGGCTGCT...CACCTCAAGGAGCAACAGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 90 bp | CATCTTCATGGTGCCCCGCAGGTAGGGCGAGGGGATGTCGCTGAATaGCTTCTCAGGCAGCAGGGAGTTGCTCACGGATGTAGTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HLHGAPQVGRGDVAE*LLRQQGVAHGCSVL Trigger: CAGGACACTACATCCGTGAGCAACTCCCTGCTGCCTGAGAAGGCATTCAGCGACATCCCCTCGCCCTACCTGCGGGGCACCATGAAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 90 bp | GGCAATGTGGCGCTTGCCTGCAATCCCAGGGTTTTGACAGCGATCTaGCTAGTGAGCGGCGGCGGCAGGTTGATGCACACCAAGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: GNVALACNPRVLTAI*LVSGGGRLMHTKST Trigger: TGTGGACTTGGTGTGCATCAACCTGCCGCCGCCGCTCACTAGGCAGATCGCTGTCAAAACCCTGGGATTGCAGGCAAGCGCCACATTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
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| CDS CCA 90 bp | ACACCAAGTCCACATCCTGGTGCAGGAGCACCTCGTCGATGCGGCTaGTGTAGAAAGGAACGCTCATCTCCTTGGCCAGCTCCTCGGCTT | + |
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Preference number: 5 (lower is better) Translates to: TPSPHPGAGAPRRCG*CRKERSSPWPAPRL Trigger: AAGCCGAGGAGCTGGCCAAGGAGATGAGCGTTCCTTTCTACACCAGCCGCATCGACGAGGTGCTCCTGCACCAGGATGTGGACTTGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055341.7 ENSMUST00000222779.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGGGCATCATCCACTCAGGAGCCTGGAACTGCAGATCCCGAGGGAGGGCAATGTGGTCCGTCTGCTaGACAAAGGTCTTGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QWGIIHSGAWNCRSRGRAMWSVC*TKVLSS Trigger: GCTGCTCAAGACCTTTGTCAAGCAGACGGACCACAT...TGCCCTCCCTCGGGATCTGCAGTTCCAGGCTCCTGAGTGGATGATGCCCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAATTACCAGGGCCCCAGGGAGGAACGCTGACTGGACTCAGGCCGACTGTCTGGCTGGACCTCTaGATGGTGTCTACCACGCAA | + |
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Preference number: 5 (lower is better) Translates to: VSELPGPQGGTLTGLRPTVWLDL*MVSTTQ Trigger: TTGCGTGGTAGACACCATCAAGAGGTCCAGCCAGAC...AGTCGGCCTGAGTCCAGTCAGCGTTCCTCCCTGGGGCCCTGGTAATTCAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CCA 90 bp | TCTGGCTCCTCGGTCATGATGGCGATGTTCTGCCACTCTCCAGTCTaGCTGGACCTCTTGATGGTGTCTACCACGCAAAGAGCGTACAGG | + |
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Preference number: 5 (lower is better) Translates to: SGSSVMMAMFCHSPV*LDLLMVSTTQRAYR Trigger: CCTGTACGCTCTTTGCGTGGTAGACACCATCAAGAGGTCCAGCCAGACTGGAGAGTGGCAGAACATCGCCATCATGACCGAGGAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 90 bp | TCACAGATGACATTCTTGCCTATTCCCAGGGTTTTGACAGCGATCTaGCTAGTGAGCGGCGGCGGCAGGTTGATGCACACCAAGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SQMTFLPIPRVLTAI*LVSGGGRLMHTKST Trigger: TGTGGACTTGGTGTGCATCAACCTGCCGCCGCCGCTCACTAGGCAGATCGCTGTCAAAACCCTGGGAATAGGCAAGAATGTCATCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | AGCTTGTTTGCCATCTTGGTCAGCTCAGAGGCACAGCTTGCCGCCTCCATGGCTAACTCTCCAGGCACATaGAAGTTCAGGGTAACGGTG | + |
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Preference number: 5 (lower is better) Translates to: SLFAILVSSEAQLAASMANSPGT*KFRVTV Trigger: CACCGTTACCCTGAACTTCAATGTGCCTGGAGAGTT...AGCCATGGAGGCGGCAAGCTGTGCCTCTGAGCTGACCAAGATGGCAAACAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | GAGCTAGCAGAATACAAGTGCTGGGGATGGCTCTGGAGCCATACTTCAGACTTCTCAGGCAGCAGGGAGTaGCTCACGGATGTAGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: ELAEYKCWGWLWSHTSDFSGSRE*LTDVVS Trigger: GGACACTACATCCGTGAGCAACTCCCTGCTGCCTGA...GAAGTCTGAAGTATGGCTCCAGAGCCATCCCCAGCACTTGTATTCTGCTAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCACGTGCGCCGGTCATCTaGATCCTGGAAGGCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPRAPVI*ILEGLA Trigger: CGCCAGGCCTTCCAGGATCAAGATGACCGGCGCACG...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | GCTTTGGGCATGTCACATCTTCATGTATACATAGAGGGAATGAGACAGTACCCAAGCGGCGGCGGCAGGTaGATGCACACCAAGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: ALGMSHLHVYIEGMRQYPSGGGR*MHTKST Trigger: TGTGGACTTGGTGTGCATCAACCTGCCGCCGCCGCT...TGGGTACTGTCTCATTCCCTCTATGTATACATGAAGATGTGACATGCCCAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | CCATGGCTGCCCGTTACTCTATACTGCACTAACAGCAACGAGCCAGGTAGGTATCCTATTCCCAGGGTTTaGACAGCGATCTGCCTAGTG | + |
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Preference number: 5 (lower is better) Translates to: PWLPVTLYCTNSNEPGRYPIPRV*TAICLV Trigger: CACTAGGCAGATCGCTGTCAAAACCCTGGGAATAGG...ATACCTACCTGGCTCGTTGCTGTTAGTGCAGTATAGAGTAACGGGCAGCCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | TGGCATCCTGCTCAACTGTGGCTGTTGTGGACCCCAGGCCACGCCTCTTATACTTCACAGATGACATTCTaGCCTATTCCCAGGGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: WHPAQLWLLWTPGHASYTSQMTF*PIPRVL Trigger: CAAAACCCTGGGAATAGGCAAGAATGTCATCTGTGA...AGTATAAGAGGCGTGGCCTGGGGTCCACAACAGCCACAGTTGAGCAGGATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | CAATGGGTCCTTGCAGATTCCCCGCAGGGACAATTATTGAATCATTTGAAGATAAGCGGCGGCGGCAGGTaGATGCACACCAAGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: QWVLADSPQGQLLNHLKISGGGR*MHTKST Trigger: TGTGGACTTGGTGTGCATCAACCTGCCGCCGCCGCT...TATCTTCAAATGATTCAATAATTGTCCCTGCGGGGAATCTGCAAGGACCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
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| CDS-3UTR CAA 90 bp | GGGGCTTCCTTAAAGGACAACACCTGCCTCTTTACACTAGCGAAGGACCATGATTCGTCGCAGCTCCAGTaGTATTTCTTGCCCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GASLKDNTCLFTLAKDHDSSQLQ*YFLPSR Trigger: TCTGCTGGGCAAGAAATACAACTGGAGCTGCGACGA...ATCATGGTCCTTCGCTAGTGTAAAGAGGCAGGTGTTGTCCTTTAAGGAAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | GTTCTCTCATGCTTCTTCCAAAGAATACATATTCTTTCCATAGCCCCCAGCCTCCTCCAGTTGTATTTCTaGCCCAGCAGACTACCGCTG | + |
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Preference number: 5 (lower is better) Translates to: VLSCFFQRIHILSIAPSLLQLYF*PSRLPL Trigger: CAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAG...GAGGCTGGGGGCTATGGAAAGAATATGTATTCTTTGGAAGAAGCATGAGAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS-3UTR CAA 90 bp | TGCAGATCAGAAATACAGGCAGTAGTGTCCTTTCTTCTTTCAAAGCATATTTGTTGCAATCCCAGGGTTTaGACAGCGATCTGCCTAGTG | + |
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Preference number: 5 (lower is better) Translates to: CRSEIQAVVSFLLSKHICCNPRV*TAICLV Trigger: CACTAGGCAGATCGCTGTCAAAACCCTGGGATTGCA...ACAAATATGCTTTGAAAGAAGAAAGGACACTACTGCCTGTATTTCTGATCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
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| CDS GCA 72 bp | ACGCTCATCTCCTTGGCCAGCTCCTCGGCTTCTTCCTaGGTGCGGCCCCACAGCGCCTTCACCGCGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TLISLASSSASS*VRPHSAFTAKP Trigger: GGGCTTCGCGGTGAAGGCGCTGTGGGGCCGCACGCAGGAAGAAGCCGAGGAGCTGGCCAAGGAGATGAGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 72 bp | GGTAAGAGGCCGGCCGTCCCACGTGCGCCGGTCATCTaGATCCTGGAAGGCCTGGCGCACTGCCTGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: GKRPAVPRAPVI*ILEGLAHCLHH Trigger: ATGATGCAGGCAGTGCGCCAGGCCTTCCAGGATCAAGATGACCGGCGCACGTGGGACGGCCGGCCTCTTACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | TGTCCTGAAGCAGCAGCTCCTGCTCTGGGGCGCTATTaGGCTGTCCATAGAGGTCGGTGCCCACCGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CPEAAAPALGRY*AVHRGRCPPPG Trigger: TCCTGGCGGTGGGCACCGACCTCTATGGACAGCGCAATAGCGCCCCAGAGCAGGAGCTGCTGCTTCAGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | GCGCCGGTCATCTTGATCCTGGAAGGCCTGGCGCACTaGCTGCATCATCTTCATGGTGCCCCGCAGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: APVILILEGLAH*LHHLHGAPQVG Trigger: CCCTACCTGCGGGGCACCATGAAGATGATGCAGGCAGTGCGCCAGGCCTTCCAGGATCAAGATGACCGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 90 bp | GGCAGCCATGGTAAGAGGCCGGCCGTCCCACGTGCGCCGGTCATCTaGATCCTGGAAGGCCTGGCGCACTGCCTGCATCATCTTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: GSHGKRPAVPRAPVI*ILEGLAHCLHHLHG Trigger: ACCATGAAGATGATGCAGGCAGTGCGCCAGGCCTTCCAGGATCAAGATGACCGGCGCACGTGGGACGGCCGGCCTCTTACCATGGCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 90 bp | AGGCCGCCACCACCCATCAGGTCGTCGCAGCTCCAGTTGTATTTCTaGCCCAGCAGACTACCGCTGTGCACCTGCACCTCGCACACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RPPPPIRSSQLQLYF*PSRLPLCTCTSHTS Trigger: GCTGGTGTGCGAGGTGCAGGTGCACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAGCTGCGACGACCTGATGGGTGGTGGCGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 90 bp | ACGGAGTGCAGGCCGCCACCACCCATCAGGTCGTCGCAGCTCCAGTaGTATTTCTTGCCCAGCAGACTACCGCTGTGCACCTGCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: TECRPPPPIRSSQLQ*YFLPSRLPLCTCTS Trigger: CGAGGTGCAGGTGCACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAGCTGCGACGACCTGATGGGTGGTGGCGGCCTGCACTCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | GCGCTTGCCTGCAATCCCAGGGTTTTGACAGCGATCTaGCTAGTGAGCGGCGGCGGCAGGTTGATGCACACC | + |
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Preference number: 6 (lower is better) Translates to: ALACNPRVLTAI*LVSGGGRLMHT Trigger: GGTGTGCATCAACCTGCCGCCGCCGCTCACTAGGCAGATCGCTGTCAAAACCCTGGGATTGCAGGCAAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
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| CDS TCA 72 bp | TCAGGCAGCAGGGAGTTGCTCACGGATGTAGTGTCCTaGAGCAGCAGCTCCTGCTCTGGGGCGCTATTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SGSRELLTDVVS*SSSSCSGALLR Trigger: GCGCAATAGCGCCCCAGAGCAGGAGCTGCTGCTTCAGGACACTACATCCGTGAGCAACTCCCTGCTGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | CTCCAGTTGTATTTCTTGCCCAGCAGACTACCGCTGTaGACCTGCACCTCGCACACCAGCAGCTCGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: LQLYFLPSRLPL*TCTSHTSSSPT Trigger: CGTGGGCGAGCTGCTGGTGTGCGAGGTGCAGGTGCACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 72 bp | AGGCCGCCACCACCCATCAGGTCGTCGCAGCTCCAGTaGTATTTCTTGCCCAGCAGACTACCGCTGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: RPPPPIRSSQLQ*YFLPSRLPLCT Trigger: GGTGCACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAGCTGCGACGACCTGATGGGTGGTGGCGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 90 bp | GCGGAACCCACCACGGTCACGTCCTGCTTGAACTCTCCAGGCACATaGAAGTTCAGGGTAACGGTGCAGCACACTCCACCCTCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: AEPTTVTSCLNSPGT*KFRVTVQHTPPSST Trigger: GGTGCTGGAGGGTGGAGTGTGCTGCACCGTTACCCTGAACTTCAATGTGCCTGGAGAGTTCAAGCAGGACGTGACCGTGGTGGGTTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | CACCCATCAGGTCGTCGCAGCTCCAGTTGTATTTCTTaGCCAGCAGACTACCGCTGTGCACCTGCACCTCGC | + |
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Preference number: 6 (lower is better) Translates to: HPSGRRSSSCIS*PADYRCAPAPR Trigger: GCGAGGTGCAGGTGCACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAGCTGCGACGACCTGATGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | AGGAGCCGCCCAGCGGAACCCACCACGGTCACGTCCTaGTTGAACTCTCCAGGCACATTGAAGTTCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: RSRPAEPTTVTS*LNSPGTLKFRV Trigger: TACCCTGAACTTCAATGTGCCTGGAGAGTTCAAGCAGGACGTGACCGTGGTGGGTTCCGCTGGGCGGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CCA 72 bp | CCACATCCTGGTGCAGGAGCACCTCGTCGATGCGGCTaGTGTAGAAAGGAACGCTCATCTCCTTGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PHPGAGAPRRCG*CRKERSSPWPA Trigger: AGCTGGCCAAGGAGATGAGCGTTCCTTTCTACACCAGCCGCATCGACGAGGTGCTCCTGCACCAGGATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055341.7 ENSMUST00000222779.2 |
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| CDS CAA 72 bp | CCACCCATCAGGTCGTCGCAGCTCCAGTTGTATTTCTaGCCCAGCAGACTACCGCTGTGCACCTGCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: PPIRSSQLQLYF*PSRLPLCTCTS Trigger: CGAGGTGCAGGTGCACAGCGGTAGTCTGCTGGGCAAGAAATACAACTGGAGCTGCGACGACCTGATGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 72 bp | AGCCGCCCAGCGGAACCCACCACGGTCACGTCCTGCTaGAACTCTCCAGGCACATTGAAGTTCAGGGTAACG | + |
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Preference number: 6 (lower is better) Translates to: SRPAEPTTVTSC*NSPGTLKFRVT Trigger: CGTTACCCTGAACTTCAATGTGCCTGGAGAGTTCAAGCAGGACGTGACCGTGGTGGGTTCCGCTGGGCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 90 bp | GTGGCGGTACGGTCACAGATGACATTCTTGCCTATTCCCAGGGTTTaGACAGCGATCTGCCTAGTGAGCGGCGGCGGCAGGTTGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: VAVRSQMTFLPIPRV*TAICLVSGGGRLMH Trigger: GTGCATCAACCTGCCGCCGCCGCTCACTAGGCAGATCGCTGTCAAAACCCTGGGAATAGGCAAGAATGTCATCTGTGACCGTACCGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | ACATTCTTGCCTATTCCCAGGGTTTTGACAGCGATCTaGCTAGTGAGCGGCGGCGGCAGGTTGATGCACACC | + |
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Preference number: 6 (lower is better) Translates to: TFLPIPRVLTAI*LVSGGGRLMHT Trigger: GGTGTGCATCAACCTGCCGCCGCCGCTCACTAGGCAGATCGCTGTCAAAACCCTGGGAATAGGCAAGAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS CAA 72 bp | ACCACGGTCACGTCCTGCTTGAACTCTCCAGGCACATaGAAGTTCAGGGTAACGGTGCAGCACACTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: TTVTSCLNSPGT*KFRVTVQHTPP Trigger: GGGTGGAGTGTGCTGCACCGTTACCCTGAACTTCAATGTGCCTGGAGAGTTCAAGCAGGACGTGACCGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055341.7 |
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| CDS GCA 72 bp | GTAGCGATGGAAATAACATCCAGGCAATGTGGCGCTTaGCTGCAATCCCAGGGTTTTGACAGCGATCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VAMEITSRQCGA*LQSQGFDSDLP Trigger: AGGCAGATCGCTGTCAAAACCCTGGGATTGCAGGCAAGCGCCACATTGCCTGGATGTTATTTCCATCGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222779.2 |
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