Pregenerated sensors for GFM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021666Ensembl transcript IDs: ENSMUST00000022170.8, ENSMUST00000042084.13, ENSMUST00000160139.8, ENSMUST00000160981.2, ENSMUST00000161639.8, ENSMUST00000161825.8, ENSMUST00000161913.8, ENSMUST00000161929.8
Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGCAGAAAGCGGTCCTCGCGCTCCTCGGGTGACGGCAGGTAAGTaGTCACCGCATCCAGCAGGGGCTGCACGCCCTTGTTCTTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: TAESGPRAPRVTAGK*SPHPAGAARPCSSR Trigger: CCTTGAAGAACAAGGGCGTGCAGCCCCTGCTGGATGCGGTGACCACTTACCTGCCGTCACCCGAGGAGCGCGAGGACCGCTTTCTGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
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| 3UTR CCA 90 bp | GTCCGCTCCTCACAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTaGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VRSSQAQASGLCSRG*CCLGRLRQCILASG Trigger: TCCTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTGTGAGGAGCGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR GCA 90 bp | CGCTCCTCACAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTaGTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: RSSQAQASGLCSRGW*CLGRLRQCILASGS Trigger: ACTTCCTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTGTGAGGAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR TCA 90 bp | CAGCCTGAGGACCTGACTGTGAGCCCCAGCACTGGCTTTCAGAGTTaGATGTTCTGTCAGCAGTCAGGACAGATGGACGGAGGTGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QPEDLTVSPSTGFQS*MFCQQSGQMDGGGV Trigger: CACCCCACCTCCGTCCATCTGTCCTGACTGCTGACAGAACATTCAACTCTGAAAGCCAGTGCTGGGGCTCACAGTCAGGTCCTCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR CCA 90 bp | GAGCACTTCCCGGGAGTTTGGTGGACAGTGCTCTTCTGCGGGAATTaGCACATTTTTCCCATAGGGACCAGACCGCCCTTAAGTGCCATG | + |
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Preference number: 1 (lower is better) Translates to: EHFPGVWWTVLFCGN*HIFPIGTRPPLSAM Trigger: CATGGCACTTAAGGGCGGTCTGGTCCCTATGGGAAAAATGTGCCAATTCCCGCAGAAGAGCACTGTCCACCAAACTCCCGGGAAGTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR TCA 90 bp | GGACAGATGGACGGAGGTGGGGTGGGAGGGCTCACTGTTCACTGCTaGACTGTTTGCTACAGACAGACTCAAGGGCCATTACTTCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: GQMDGGGVGGLTVHC*TVCYRQTQGPLLQL Trigger: TAACTGAAGTAATGGCCCTTGAGTCTGTCTGTAGCAAACAGTTCAGCAGTGAACAGTGAGCCCTCCCACCCCACCTCCGTCCATCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR CCA 90 bp | GTTGAATGTTCTGTCAGCAGTCAGGACAGATGGACGGAGGTGGGGTaGGAGGGCTCACTGTTCACTGCTGAACTGTTTGCTACAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: VECSVSSQDRWTEVG*EGSLFTAELFATDR Trigger: TCTGTCTGTAGCAAACAGTTCAGCAGTGAACAGTGAGCCCTCCCACCCCACCTCCGTCCATCTGTCCTGACTGCTGACAGAACATTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR CCA 90 bp | TCAGAGTTGAATGTTCTGTCAGCAGTCAGGACAGATGGACGGAGGTaGGGTGGGAGGGCTCACTGTTCACTGCTGAACTGTTTGCTACAG | + |
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Preference number: 1 (lower is better) Translates to: SELNVLSAVRTDGRR*GGRAHCSLLNCLLQ Trigger: CTGTAGCAAACAGTTCAGCAGTGAACAGTGAGCCCTCCCACCCCACCTCCGTCCATCTGTCCTGACTGCTGACAGAACATTCAACTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR TCA 90 bp | AGCAGATCCGGGGTATTTTGTGTTTGTCAGCTTGCCTCCATACAGTaGGAGTCTGGGCCTTTAATCCCAGTCCTTAGGAGGCAGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SRSGVFCVCQLASIQ*ESGPLIPVLRRQRW Trigger: CCACCTCTGCCTCCTAAGGACTGGGATTAAAGGCCCAGACTCTCACTGTATGGAGGCAAGCTGACAAACACAAAATACCCCGGATCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
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| 3UTR GCA 90 bp | GAGTCTGAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTaGTGTGCTAGGTTCCAAAGGGTGAGCTATATGCGTTGCTACCCA | + |
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Preference number: 1 (lower is better) Translates to: ESETTSPIPESRTYL*CARFQRVSYMRCYP Trigger: TGGGTAGCAACGCATATAGCTCACCCTTTGGAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTCAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR GCA 90 bp | CTAGGACTCACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTaGTCCTTACCATTGCTACCCATGCCTGTTGGCATTGATCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: LGLTPLVLQDLEQLF*SLPLLPMPVGIDQN Trigger: ATTCTGATCAATGCCAACAGGCATGGGTAGCAATGGTAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTGAGTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR TCA 90 bp | TGCTCCTTACCATTGCTACCCATGCCTGTTGGCATTGATCAGAATTaGAGACAGCTAGCTGCAGCTACATTTCCAGCATTCCACAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: CSLPLLPMPVGIDQN*RQLAAATFPAFHSQ Trigger: CTGGCTGTGGAATGCTGGAAATGTAGCTGCAGCTAGCTGTCTTCAATTCTGATCAATGCCAACAGGCATGGGTAGCAATGGTAAGGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR GCA 90 bp | TGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATCTTaGAATGGTTTAAAAGAGAGATGTCAGGCTAGAAAGAAGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: CTSTPEGCPVWILSS*NGLKERCQARKKAE Trigger: CTCAGCCTTCTTTCTAGCCTGACATCTCTCTTTTAAACCATTGCAAGATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR GCA 90 bp | CCTGTTCTCTTTATAATGCTGAGCATTTTGCATTTAGAAGCTGGCTaGTTTTTGAGAACTCAGCTCCGAGCCCTGGCTGCCCTTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PVLFIMLSILHLEAG*FLRTQLRALAALPL Trigger: GAGAGGAAGGGCAGCCAGGGCTCGGAGCTGAGTTCTCAAAAAGCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAAGAGAACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR CCA 90 bp | GTACCCTGTTCTCTTTATAATGCTGAGCATTTTGCATTTAGAAGCTaGCTGCTTTTTGAGAACTCAGCTCCGAGCCCTGGCTGCCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: VPCSLYNAEHFAFRS*LLFENSAPSPGCPS Trigger: GGAAGGGCAGCCAGGGCTCGGAGCTGAGTTCTCAAAAAGCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAAGAGAACAGGGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR GCA 90 bp | ACTTACCTCTGCTGTGCTAGGTTCCAAAGGGTGAGCTATATGCGTTaGTACCCAGCTTTGCTTGGTTCTTCTATACCAGTGGTTCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: TYLCCARFQRVSYMR*YPALLGSSIPVVLN Trigger: GTTGAGAACCACTGGTATAGAAGAACCAAGCAAAGCTGGGTAGCAACGCATATAGCTCACCCTTTGGAACCTAGCACAGCAGAGGTAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR TCA 90 bp | AAACCCAAGAGATTAGAGTTCTGTTGGGACAGTTTTATGCGAGTCTaGGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: KPKRLEFCWDSFMRV*DHFSYSREQDLPLL Trigger: CAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTCAGACTCGCATAAAACTGTCCCAACAGAACTCTAATCTCTTGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR GCA 90 bp | TTACTTTCTCATCTTCTCCACCCCTTACAAAAGTGGAGCCACGAATaGCCACTAAAGGAGGCAGCGCTGTACCCTGTTCTCTTTATAATG | + |
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Preference number: 1 (lower is better) Translates to: LLSHLLHPLQKWSHE*PLKEAALYPVLFIM Trigger: CATTATAAAGAGAACAGGGTACAGCGCTGCCTCCTTTAGTGGGCATTCGTGGCTCCACTTTTGTAAGGGGTGGAGAAGATGAGAAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR CCA 90 bp | TACCCAGCTTTGCTTGGTTCTTCTATACCAGTGGTTCTCAACCTGTaGGTAGTGACCCCTTTAAGACCACTGGAAATAGCAGATACTTAC | + |
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Preference number: 1 (lower is better) Translates to: YPALLGSSIPVVLNL*VVTPLRPLEIADTY Trigger: GTAAGTATCTGCTATTTCCAGTGGTCTTAAAGGGGTCACTACCCACAGGTTGAGAACCACTGGTATAGAAGAACCAAGCAAAGCTGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR TCA 90 bp | AGGCAGTGTATCTTGGCTTCAGGAAGTTCATCACTAGGTGGACTTTaGGAGCTCATTGCCTTGCTTCCTGCTGAGAAAAGAAACCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: RQCILASGSSSLGGL*ELIALLPAEKRNLF Trigger: AAAAAGGTTTCTTTTCTCAGCAGGAAGCAAGGCAATGAGCTCTCAAAGTCCACCTAGTGATGAACTTCCTGAAGCCAAGATACACTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGGCTGCGCACCCCGCGGACAGATGGACGGAGGTaGGGTGGGAGGGCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: MCHKPREGSSALGLRTPRTDGRR*GGRAHC Trigger: ACAGTGAGCCCTCCCACCCCACCTCCGTCCATCTGT...CCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTACCGGGGCCCAGCTGTaGTGCAATATAGCAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: QAQASGLCSRGWCCLGRLTGAQL*CNIAKY Trigger: GTACTTTGCTATATTGCACCACAGCTGGGCCCCGGT...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATCTCTGCTCCCGGGGGTaGTGCTGTTTGGGGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ELRPWISVITPQFQLQGDLCSRG*CCLGRL Trigger: AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAG...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCCTCTGCTCCCGGGGGTaGTGCTGTTTGGGGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ALDLRNHTTIPAPGGWNILCSRG*CCLGRL Trigger: AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAG...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR CAA 90 bp | TCACAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTaGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGAAGTTCATCA | + |
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Preference number: 2 (lower is better) Translates to: SQAQASGLCSRGWCC*GRLRQCILASGSSS Trigger: TGATGAACTTCCTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGTGCTCCCGGGGGTGGTaGTGTTTGGGGAGGCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: RRLRYLRSLLQRTRAQALCSRGW*CLGRLR Trigger: CCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCA...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATCAGGCTTCTGGACTCTaGTCCCGGGGGTGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RKSLALALQRAALCGYCHQASGL*SRGWCC Trigger: ACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTG...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCACAGGCTTCTGGACTCTaGTCCCGGGGGTGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: KEKPCTSTPEGCPVWILSQASGL*SRGWCC Trigger: ACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTG...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGACTCACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTGCTCCTTAGGAGTGATGGCTCTGTaGGAGGGCTGTGTCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LGLTPLVLQDLEQLFCSLGVMAL*EGCVSL Trigger: CAGGCTGACACAGCCCTCCCACAGAGCCATCACTCC...TAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTGAGTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR CAA 90 bp | GGACGGAGGTGGGGTGGGAGGGCTCACTGTTCACTGCTGAACTGTTaGCTACAGACAGACTCAAGGGCCATTACTTCAGTTATGCACCCC | + |
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Preference number: 2 (lower is better) Translates to: GRRWGGRAHCSLLNC*LQTDSRAITSVMHP Trigger: GGGGTGCATAACTGAAGTAATGGCCCTTGAGTCTGTCTGTAGCAAACAGTTCAGCAGTGAACAGTGAGCCCTCCCACCCCACCTCCGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGCCAACAGAATTAGAATaGCAGCTCCAAGGGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: APGGGAVWGGLGSVSWLQPTELE*QLQGSC Trigger: ACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGG...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAATCCTTTAAGGGAGCTCAGCGCTaGGGCTGCGCACCCCGCGGC | + |
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Preference number: 2 (lower is better) Translates to: GFMKRKGFGSDFRRLESFKGAQR*GCAPRG Trigger: GCCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTT...AAAGGATTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGACTCACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTGCTCCTTACACTTCCCGGGAGTTTaGTGGACAGTGCTCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LGLTPLVLQDLEQLFCSLHFPGV*WTVLFC Trigger: GCAGAAGAGCACTGTCCACCAAACTCCCGGGAAGTG...TAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTGAGTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCTGTGCCAGTGTCACCCTGTGTACTGCAGCCTGTAACTTTTCAGCTGGTCTTGCCTCCATACAGTaGGAGTCTGGGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: AACASVTLCTAACNFSAGLASIQ*ESGPLI Trigger: GATTAAAGGCCCAGACTCTCACTGTATGGAGGCAAG...ACCAGCTGAAAAGTTACAGGCTGCAGTACACAGGGTGACACTGGCACAGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAGGGGCCCAGCTGTGGTaGAATATAGCAAAGTACACC | + |
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Preference number: 2 (lower is better) Translates to: KEKPCTSTPEGCPVWILSGAQLW*NIAKYT Trigger: GGTGTACTTTGCTATATTGCACCACAGCTGGGCCCC...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAACCGGGGCCCAGCTGTaGTGCAATATAGCAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: KEKPCTSTPEGCPVWILSTGAQL*CNIAKY Trigger: GTACTTTGCTATATTGCACCACAGCTGGGCCCCGGT...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGACCGGGGCCCAGCTGTaGTGCAATATAGCAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: RRLRYLRSLLQRTRAQALTGAQL*CNIAKY Trigger: GTACTTTGCTATATTGCACCACAGCTGGGCCCCGGT...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTAAAGGAGGCAGCGCTGTACCCTGTTCTCTTTATAATGCTGAGCATTTTGTGGACGGAGGTGGGGTaGGAGGGCTCACTGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: PLKEAALYPVLFIMLSILWTEVG*EGSLFT Trigger: AGTGAACAGTGAGCCCTCCCACCCCACCTCCGTCCA...CAAAATGCTCAGCATTATAAAGAGAACAGGGTACAGCGCTGCCTCCTTTAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGGCTGCAAACTGGTTTTCTAGGGCTCAGAGTTCATTCACACTGTTCCTATTATGCACCCCCTGGTaGTCCTCTCAGCTCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: KLAANWFSRAQSSFTLFLLCTPW*SSQLHR Trigger: CCTGTGGAGCTGAGAGGATCACCAGGGGGTGCATAA...TAGGAACAGTGTGAATGAACTCTGAGCCCTAGAAAACCAGTTTGCAGCCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATAAGTTCATCACTAGGTaGACTTTGAGAGCTCATTGC | + |
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Preference number: 2 (lower is better) Translates to: ELRPWISVITPQFQLQGDKFITR*TLRAHC Trigger: GCAATGAGCTCTCAAAGTCCACCTAGTGATGAACTT...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR-3UTR CCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCCTCTGCTCCCGGGGGTaGTGCTGTTTGGGGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: NISKVKQEMSKRGPLLTGLCSRG*CCLGRL Trigger: AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAG...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| 3UTR CAA 90 bp | CTCTTTATAATGCTGAGCATTTTGCATTTAGAAGCTGGCTGCTTTTaGAGAACTCAGCTCCGAGCCCTGGCTGCCCTTCCTCTCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LFIMLSILHLEAGCF*RTQLRALAALPLLH Trigger: GTGCAGGAGAGGAAGGGCAGCCAGGGCTCGGAGCTGAGTTCTCAAAAAGCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGGACTCACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTGCTCCTTAACTGGCTTTCAGAGTTaGATGTTCTGTCAGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LGLTPLVLQDLEQLFCSLTGFQS*MFCQQS Trigger: TGACTGCTGACAGAACATTCAACTCTGAAAGCCAGT...TAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTGAGTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTGAGAGCTCATTGCCTTaGTTCCTGCTGAGAAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RYLRSLLQRTRAQALDLRESSLP*FLLRKE Trigger: TTCTTTTCTCAGCAGGAAGCAAGGCAATGAGCTCTC...ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGAGAGCTCATTGCCTTaGTTCCTGCTGAGAAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RRLRYLRSLLQRTRAQALESSLP*FLLRKE Trigger: TTCTTTTCTCAGCAGGAAGCAAGGCAATGAGCTCTC...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGCCAACAGAATTAGAATaGCAGCTCCAAGGGTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: RRLRYLRSLLQRTRAQALPTELE*QLQGSC Trigger: ACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGG...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATTTCCTAAGCTGCCCTaGCCAGGTTATTTTATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KEKPCTSTPEGCPVWILSFPKLP*PGYFIP Trigger: TGGGATAAAATAACCTGGCCAGGGCAGCTTAGGAAA...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCTTAGGCAGTGTATCTTaGCTTCAGGAAGTTCATCAC | + |
|
Preference number: 2 (lower is better) Translates to: ALDLRNHTTIPAPGGWNILGSVS*LQEVHH Trigger: GTGATGAACTTCCTGAAGCCAAGATACACTGCCTAA...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 90 bp | TGTGCTAGGTTCCAAAGGGTGAGCTATATGCGTTGCTACCCAGCTTaGCTTGGTTCTTCTATACCAGTGGTTCTCAACCTGTGGGTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: CARFQRVSYMRCYPA*LGSSIPVVLNLWVV Trigger: CACTACCCACAGGTTGAGAACCACTGGTATAGAAGAACCAAGCAAAGCTGGGTAGCAACGCATATAGCTCACCCTTTGGAACCTAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCACTGCTCTATTAAGATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGTACCTTGCAACACTaGATGTTCTTGGTAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RHCSIKMCHKPREGSSALGTLQH*MFLVEN Trigger: GTTTTCTACCAAGAACATGCAGTGTTGCAAGGTACC...CAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACATCTTAATAGAGCAGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCCTGTGCCAGTGTCACCCTGTGTACTGCAGCCTGTAACTTTTCAGCTGGTCGCATAGTTAAAACTTaGTCCAGTCTTGTCCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: AACASVTLCTAACNFSAGRIVKT*SSLVHL Trigger: AAGATGGACAAGACTGGAGCAAGTTTTAACTATGCG...ACCAGCTGAAAAGTTACAGGCTGCAGTACACAGGGTGACACTGGCACAGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTTTTCCTAAGCTGCCCTaGCCAGGTTATTTTATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KKAEVFKITLAEDPSSGPFPKLP*PGYFIP Trigger: TGGGATAAAATAACCTGGCCAGGGCAGCTTAGGAAA...AGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCCTTGGAAAGTTCTGGCTTCACCAATTGGCAGCTGTAAAATCAGGGGCTTTGGAGGCAGAGGTGGGTaGATCTCTGTAAGTTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TPWKVLASPIGSCKIRGFGGRGG*ISVSLS Trigger: GCTCAAACTTACAGAGATCCACCCACCTCTGCCTCC...AAAGCCCCTGATTTTACAGCTGCCAATTGGTGAAGCCAGAACTTTCCAAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAATCCTTTTTCCCGGGAGTTTGGTaGACAGTGCTCTTCTGCGGG | + |
|
Preference number: 2 (lower is better) Translates to: GFMKRKGFGSDFRRLESFFPGVW*TVLFCG Trigger: CCCGCAGAAGAGCACTGTCCACCAAACTCCCGGGAA...AAAGGATTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR GCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCGGGGCCCAGCTGTGGTaGAATATAGCAAAGTACACC | + |
|
Preference number: 2 (lower is better) Translates to: GWNISKVKQEMSKRGPLLGAQLW*NIAKYT Trigger: GGTGTACTTTGCTATATTGCACCACAGCTGGGCCCC...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR GCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCGGGGCCCAGCTGTGGTaGAATATAGCAAAGTACACC | + |
|
Preference number: 2 (lower is better) Translates to: NISKVKQEMSKRGPLLTGGAQLW*NIAKYT Trigger: GGTGTACTTTGCTATATTGCACCACAGCTGGGCCCC...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTGGCTGCAAACTGGTTTTCTAGGGCTCAGAGTTCATTCACACTGTTCCTATGTGAGCCCCAGCACTaGCTTTCAGAGTTGAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: KLAANWFSRAQSSFTLFLCEPQH*LSELNV Trigger: AACATTCAACTCTGAAAGCCAGTGCTGGGGCTCACA...TAGGAACAGTGTGAATGAACTCTGAGCCCTAGAAAACCAGTTTGCAGCCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGCATCCTCTCGAAGTCTTTTCCATCGTCAGAGTTAGAATTCCAAAGGAGTCATACAGTGAGAGTCTaGGCCTTTAATCCCAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RGILSKSFPSSELEFQRSHTVRV*AFNPSP Trigger: AGGACTGGGATTAAAGGCCCAGACTCTCACTGTATG...ACTCCTTTGGAATTCTAACTCTGACGATGGAAAAGACTTCGAGAGGATGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR CAA 90 bp | CATCTAAGTCTGCAACTTGTTCAATTAAGGAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCCGATCACTCGCTTCTGAGAGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: HLSLQLVQLRSSLLQ*SPLAVPDHSLLRGA Trigger: TGCCCCTCTCAGAAGCGAGTGATCGGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTGAACAAGTTGCAGACTTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGTACTTTAAACGCTAGTGCACACAAGTCACCCTCATACCACTGCAGAAAGCTTAGGAGGCAGAGGTaGGTGGATCTCTGTAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CSTLNASAHKSPSYHCRKLRRQR*VDLCKF Trigger: AAACTTACAGAGATCCACCCACCTCTGCCTCCTAAG...CTTTCTGCAGTGGTATGAGGGTGACTTGTGTGCACTAGCGTTTAAAGTACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGTACTTTAAACGCTAGTGCACACAAGTCACCCTCATACCACTGCAGAAAGACATCCACCACTCCTTaGAAAGTTCTGGCTTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: CSTLNASAHKSPSYHCRKTSTTP*KVLASP Trigger: TGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGT...CTTTCTGCAGTGGTATGAGGGTGACTTGTGTGCACTAGCGTTTAAAGTACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGTACTTTAAACGCTAGTGCACACAAGTCACCCTCATACCACTGCAGAAAGTTGTGTTTGTCAGCTTaGCTCCATACAGTGAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: CSTLNASAHKSPSYHCRKLCLSA*LHTVRV Trigger: GACTCTCACTGTATGGAGGCAAGCTGACAAACACAA...CTTTCTGCAGTGGTATGAGGGTGACTTGTGTGCACTAGCGTTTAAAGTACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCCAGCATTCCACAGCCAGGGGATTGGTACTCAAGTGGTGGCTGCCTTGTTACAATAATAATCTTATaGCAGGGGGTCACCTATAAT | + |
|
Preference number: 2 (lower is better) Translates to: ISSIPQPGDWYSSGGCLVTIIIL*QGVTYN Trigger: ATTATAGGTGACCCCCTGCCATAAGATTATTATTGT...AACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTGGAATGCTGGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CAA 90 bp | CAAACTCATCATCTAAGTCTGCAACTTGTTCAATTAAGGAGTTCCTaGCTTCAATTGTCTCCTTTAGCAGTTCCCGATCACTCGCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QTHHLSLQLVQLRSS*LQLSPLAVPDHSLL Trigger: CAGAAGCGAGTGATCGGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTGAACAAGTTGCAGACTTAGATGATGAGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCAAGTTCATCACTAGGTaGACTTTGAGAGCTCATTGC | + |
|
Preference number: 2 (lower is better) Translates to: GWNISKVKQEMSKRGPLLKFITR*TLRAHC Trigger: GCAATGAGCTCTCAAAGTCCACCTAGTGATGAACTT...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCTTAGGCAGTGTATCTTaGCTTCAGGAAGTTCATCAC | + |
|
Preference number: 2 (lower is better) Translates to: GWNISKVKQEMSKRGPLLLGSVS*LQEVHH Trigger: GTGATGAACTTCCTGAAGCCAAGATACACTGCCTAA...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 90 bp | AAGTCTTTTCCATCGTCAGAGTTAGAATTCCAAAGGAGTTTTTCTTaGTTTACGACATCCACCACTCCTTGGAAAGTTCTGGCTTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: KSFPSSELEFQRSFS*FTTSTTPWKVLASP Trigger: TGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGTCGTAAACAAAGAAAAACTCCTTTGGAATTCTAACTCTGACGATGGAAAAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCAAGGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAATTTAAAACCCATTCTTaGCTTAGCCAGAGAAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: IQGFMKRKGFGSDFRRLEFKTHS*LSQRKA Trigger: AGCTTTTCTCTGGCTAAGCCAAGAATGGGTTTTAAA...TTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACCTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR GCA 72 bp | GAGGTCCGCTCCTCACAGGCCCAGGCTTCTGGACTCTaGTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: EVRSSQAQASGL*SRGWCCLGRLR Trigger: CCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTGTGAGGAGCGGACCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CCA 72 bp | TCTAAACGAGGTCCGCTCCTCACAGGCCCAGGCTTCTaGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKRGPLLTGPGF*TLLPGVVLFGE Trigger: CTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTGTGAGGAGCGGACCTCGTTTAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR GCA 72 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTaGTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAQASGLCSRGW*CLGRLRQCILA Trigger: AGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR GCA 72 bp | GAACTCAGCTCCGAGCCCTGGCTGCCCTTCCTCTCCTaGACTATCCAGGTGCTAGGACTCACTCCCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: ELSSEPWLPFLS*TIQVLGLTPLV Trigger: GACAAGGGGAGTGAGTCCTAGCACCTGGATAGTGCAGGAGAGGAAGGGCAGCCAGGGCTCGGAGCTGAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | TCACAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTaGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQAQASGLCSRG*CCLGRLRQCIL Trigger: CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGGCTGCGCACCCCGCGGTCACTGCTGAACTGTTaGCTACAGACAGACTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MCHKPREGSSALGLRTPRSLLNC*LQTDSR Trigger: CCTTGAGTCTGTCTGTAGCAAACAGTTCAGCAGTGA...CCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATCGGGGGTGGTGCTGTTaGGGGAGGCTTAGGCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RKSLALALQRAALCGYCHRGWCC*GRLRQC Trigger: ACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCG...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCACGGGGGTGGTGCTGTTaGGGGAGGCTTAGGCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KEKPCTSTPEGCPVWILSRGWCC*GRLRQC Trigger: ACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCG...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR GCA 72 bp | TTAAACGCTAGTGCACACAAGTCACCCTCATACCACTaGAGAAAGCGGTCCTCGCGCTCCTCGGGTGACGGC | + |
|
Preference number: 3 (lower is better) Translates to: LNASAHKSPSYH*RKRSSRSSGDG Trigger: GCCGTCACCCGAGGAGCGCGAGGACCGCTTTCTGCAGTGGTATGAGGGTGACTTGTGTGCACTAGCGTTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR CCA 72 bp | AGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTaGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLLDSAPGGGAV*GGLGSVSWLQE Trigger: TTCCTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR GCA 72 bp | GCAGGAGGGCACGACATGTATCCCAAGCACGGAGCCTaGCTGTGGTGCTTTAAGCCTGTAGTGTTTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AGGHDMYPKHGA*LWCFKPVVFEG Trigger: CCCTTCAAACACTACAGGCTTAAAGCACCACAGGCAGGCTCCGTGCTTGGGATACATGTCGTGCCCTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | TCTGTCAGCAGTCAGGACAGATGGACGGAGGTGGGGTaGGAGGGCTCACTGTTCACTGCTGAACTGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVSSQDRWTEVG*EGSLFTAELFA Trigger: AGCAAACAGTTCAGCAGTGAACAGTGAGCCCTCCCACCCCACCTCCGTCCATCTGTCCTGACTGCTGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR TCA 72 bp | ACTCAAGGGCCATTACTTCAGTTATGCACCCCCTGGTaGTCCTCTCAGCTCCACAGGCAGCACCAGTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: TQGPLLQLCTPW*SSQLHRQHQYS Trigger: GCTGTACTGGTGCTGCCTGTGGAGCTGAGAGGATCACCAGGGGGTGCATAACTGAAGTAATGGCCCTTGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR TCA 72 bp | GACGGAGGTGGGGTGGGAGGGCTCACTGTTCACTGCTaGACTGTTTGCTACAGACAGACTCAAGGGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: DGGGVGGLTVHC*TVCYRQTQGPL Trigger: TAATGGCCCTTGAGTCTGTCTGTAGCAAACAGTTCAGCAGTGAACAGTGAGCCCTCCCACCCCACCTCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR TCA 72 bp | CGCTCCCCGAGGGGCCTCTGGTCATGTAAATCACACTaGGACAGTCTGAGCTTAACCAGAAGGAAGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RSPRGLWSCKSH*DSLSLTRRKRS Trigger: GCTCCTCTTCCTTCTGGTTAAGCTCAGACTGTCTCAGTGTGATTTACATGACCAGAGGCCCCTCGGGGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | CCGGGAGTTTGGTGGACAGTGCTCTTCTGCGGGAATTaGCACATTTTTCCCATAGGGACCAGACCGCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PGVWWTVLFCGN*HIFPIGTRPPL Trigger: TAAGGGCGGTCTGGTCCCTATGGGAAAAATGTGCCAATTCCCGCAGAAGAGCACTGTCCACCAAACTCCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGGCAGCTCCAAGGGTCTaGTCAAGTTCTTTCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: PGYFIPAPEMAEITGAQLAAPRV*SSSFHT Trigger: GGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGC...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCGCAGCTCCAAGGGTCTaGTCAAGTTCTTTCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: YFIPAPEMAEITGAQLWCAAPRV*SSSFHT Trigger: GGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGC...GCACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGACTTTGAGAGCTCATaGCCTTGCTTCCTGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELRPWISVITPQFQLQGDDFESS*PCFLLR Trigger: TCTCAGCAGGAAGCAAGGCAATGAGCTCTCAAAGTC...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR TCA 72 bp | GACCTGACTGTGAGCCCCAGCACTGGCTTTCAGAGTTaGATGTTCTGTCAGCAGTCAGGACAGATGGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLTVSPSTGFQS*MFCQQSGQMDG Trigger: TCCGTCCATCTGTCCTGACTGCTGACAGAACATTCAACTCTGAAAGCCAGTGCTGGGGCTCACAGTCAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR GCA 72 bp | GAGCACTTCCCGGGAGTTTGGTGGACAGTGCTCTTCTaGGGGAATTGGCACATTTTTCCCATAGGGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EHFPGVWWTVLF*GNWHIFPIGTR Trigger: TCTGGTCCCTATGGGAAAAATGTGCCAATTCCCGCAGAAGAGCACTGTCCACCAAACTCCCGGGAAGTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | TTCAGAGTTGAATGTTCTGTCAGCAGTCAGGACAGATaGACGGAGGTGGGGTGGGAGGGCTCACTGTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: FRVECSVSSQDR*TEVGWEGSLFT Trigger: AGTGAACAGTGAGCCCTCCCACCCCACCTCCGTCCATCTGTCCTGACTGCTGACAGAACATTCAACTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCGACTTTGAGAGCTCATaGCCTTGCTTCCTGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALDLRNHTTIPAPGGWNIDFESS*PCFLLR Trigger: TCTCAGCAGGAAGCAAGGCAATGAGCTCTCAAAGTC...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR GCA 72 bp | ATTCCACAGCCAGGGGATTGGTACTCAAGTGGTGGCTaGCTTGTTAGAAAATCCAGACAGAGCACTTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: IPQPGDWYSSGG*LVRKSRQSTSR Trigger: CCGGGAAGTGCTCTGTCTGGATTTTCTAACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR GCA 72 bp | ACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTaGTCCTTACCATTGCTACCCATGCCTGTTGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: TPLVLQDLEQLF*SLPLLPMPVGI Trigger: AATGCCAACAGGCATGGGTAGCAATGGTAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | GCTGCATCCAAGCAGAGTGGTGGCTATGGAGGTGACTaGAGAACTCTGCCACGTTGTTTAAAGAGGCGAACT | + |
|
Preference number: 3 (lower is better) Translates to: AASKQSGGYGGD*RTLPRCLKRRT Trigger: AGTTCGCCTCTTTAAACAACGTGGCAGAGTTCTCCAGTCACCTCCATAGCCACCACTCTGCTTGGATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGACTTTGAGAGCTCATaGCCTTGCTTCCTGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRLRYLRSLLQRTRAQALDFESS*PCFLLR Trigger: TCTCAGCAGGAAGCAAGGCAATGAGCTCTCAAAGTC...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CCA 72 bp | GCTTTACTTTCTCATCTTCTCCACCCCTTACAAAAGTaGAGCCACGAATGCCCACTAAAGGAGGCAGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLSHLLHPLQK*SHECPLKEAAL Trigger: CAGCGCTGCCTCCTTTAGTGGGCATTCGTGGCTCCACTTTTGTAAGGGGTGGAGAAGATGAGAAAGTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGACTCACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTGCTCCTTATGCTACCCATGCCTGTaGGCATTGATCAGAATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LGLTPLVLQDLEQLFCSLCYPCL*ALIRIE Trigger: TTCAATTCTGATCAATGCCAACAGGCATGGGTAGCA...TAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTGAGTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR TCA 72 bp | GGGGTATTTTGTGTTTGTCAGCTTGCCTCCATACAGTaGGAGTCTGGGCCTTTAATCCCAGTCCTTAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GVFCVCQLASIQ*ESGPLIPVLRR Trigger: CCTCCTAAGGACTGGGATTAAAGGCCCAGACTCTCACTGTATGGAGGCAAGCTGACAAACACAAAATACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR GCA 72 bp | ACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTaGTGTGCTAGGTTCCAAAGGGTGAGCTATATGCGT | + |
|
Preference number: 3 (lower is better) Translates to: TTSPIPESRTYL*CARFQRVSYMR Trigger: ACGCATATAGCTCACCCTTTGGAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | TGCAGCTACATTTCCAGCATTCCACAGCCAGGGGATTaGTACTCAAGTGGTGGCTGCCTTGTTAGAAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: CSYISSIPQPGD*YSSGGCLVRKS Trigger: GGATTTTCTAACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTGGAATGCTGGAAATGTAGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | AAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTaGATACTGTCATCTTGCAATGGTTTAAAAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPCTSTPEGCPV*ILSSCNGLKER Trigger: TCTCTCTTTTAAACCATTGCAAGATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGGCATCCTCTCGAAGTCTTTTCCATCGTCAGAGTTAGAATTCCAAAGGAGTTCTGGCTTCACCAATaGGCAGCTGTAAAATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EGHPLEVFSIVRVRIPKEFWLHQ*AAVKSG Trigger: CCCTGATTTTACAGCTGCCAATTGGTGAAGCCAGAA...CTCCTTTGGAATTCTAACTCTGACGATGGAAAAGACTTCGAGAGGATGCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACTAAAGGAGGCAGCGCTGTACCCTGTTCTCTTTATAATGCTGAGCATTTTGCACTGGCTTTCAGAGTaGAATGTTCTGTCAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PLKEAALYPVLFIMLSILHWLSE*NVLSAV Trigger: GACTGCTGACAGAACATTCAACTCTGAAAGCCAGTG...CAAAATGCTCAGCATTATAAAGAGAACAGGGTACAGCGCTGCCTCCTTTAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTCCCGATCACTCGCTTCTGAGAGGGGCATCCTCTCGAAGTCTTTTCCATAAACTTGCTCCAGTCTaGTCCATCTTGTTTAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: AVPDHSLLRGASSRSLFHKLAPV*SILFKK Trigger: CTTTTTAAACAAGATGGACAAGACTGGAGCAAGTTT...ATGGAAAAGACTTCGAGAGGATGCCCCTCTCAGAAGCGAGTGATCGGGAACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR GCA 72 bp | ACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATCTTaGAATGGTTTAAAAGAGAGATGTCAGGCTAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPEGCPVWILSS*NGLKERCQARK Trigger: CTTTCTAGCCTGACATCTCTCTTTTAAACCATTGCAAGATGACAGTATCCACACAGGGCAGCCCTCTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR GCA 72 bp | ATAAAGGGTTGCAGCATTAGGAAGGTTGAGAGGCACTaGTCTATTAAGATGTGTCACAAACCCAGGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IKGCSIRKVERH*SIKMCHKPREG Trigger: CCCTTCCCTGGGTTTGTGACACATCTTAATAGAGCAGTGCCTCTCAACCTTCCTAATGCTGCAACCCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR GCA 72 bp | TTTATAATGCTGAGCATTTTGCATTTAGAAGCTGGCTaGTTTTTGAGAACTCAGCTCCGAGCCCTGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FIMLSILHLEAG*FLRTQLRALAA Trigger: GGCAGCCAGGGCTCGGAGCTGAGTTCTCAAAAAGCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTTGTTTACGACATCCACCACTCCTTGGAAAGTTCTGGCTTCACCAATTGCAGATCCGGGGTATTTaGTGTTTGTCAGCTTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLCLRHPPLLGKFWLHQLQIRGI*CLSACL Trigger: GAGGCAAGCTGACAAACACAAAATACCCCGGATCTG...CAATTGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGTCGTAAACAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR TCA 72 bp | ATCTTGGCTTCAGGAAGTTCATCACTAGGTGGACTTTaGGAGCTCATTGCCTTGCTTCCTGCTGAGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILASGSSSLGGL*ELIALLPAEKR Trigger: TCTTTTCTCAGCAGGAAGCAAGGCAATGAGCTCTCAAAGTCCACCTAGTGATGAACTTCCTGAAGCCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR TCA 72 bp | CAGCTGAATGTTGCTGATGTGACACGACAGGCTAGGTaGCAGTTTCCTTTCTTCCAAGAAACCTTTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QLNVADVTRQAR*QFPFFQETFGN Trigger: GTTTCCAAAGGTTTCTTGGAAGAAAGGAAACTGTCACCTAGCCTGTCGTGTCACATCAGCAACATTCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | TTGCTTGGTTCTTCTATACCAGTGGTTCTCAACCTGTaGGTAGTGACCCCTTTAAGACCACTGGAAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLGSSIPVVLNL*VVTPLRPLEIA Trigger: TGCTATTTCCAGTGGTCTTAAAGGGGTCACTACCCACAGGTTGAGAACCACTGGTATAGAAGAACCAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | ATTCTTGGCTTAGCCAGAGAAAAGCTGGCTGCAAACTaGTTTTCTAGGGCTCAGAGTTCATTCACACTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILGLAREKLAAN*FSRAQSSFTLF Trigger: GAACAGTGTGAATGAACTCTGAGCCCTAGAAAACCAGTTTGCAGCCAGCTTTTCTCTGGCTAAGCCAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | TCTCTTTATAATGCTGAGCATTTTGCATTTAGAAGCTaGCTGCTTTTTGAGAACTCAGCTCCGAGCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLYNAEHFAFRS*LLFENSAPSPG Trigger: GCCAGGGCTCGGAGCTGAGTTCTCAAAAAGCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR TCA 72 bp | AGATTAGAGTTCTGTTGGGACAGTTTTATGCGAGTCTaGGACCACTTCTCCTATTCCAGAGAGCAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: RLEFCWDSFMRV*DHFSYSREQDL Trigger: TAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTCAGACTCGCATAAAACTGTCCCAACAGAACTCTAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAGGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAACCATGCCTGTTGGCATaGATCAGAATTGAAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: IQGFMKRKGFGSDFRRLEPCLLA*IRIEDS Trigger: GCTGTCTTCAATTCTGATCAATGCCAACAGGCATGG...TTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACCTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CCA 72 bp | GTGCAATATAGCAAAGTACACCCAACAGAATTAGAATaGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VQYSKVHPTELE*QLQGSCQVLST Trigger: TGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTGCTATATTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CCA 72 bp | AGGAGTTTTTCTTTGTTTACGACATCCACCACTCCTTaGAAAGTTCTGGCTTCACCAATTGGCAGCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSFSLFTTSTTP*KVLASPIGSCK Trigger: TTTACAGCTGCCAATTGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGTCGTAAACAAAGAAAAACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCTTTGTTTACGACATCCACCACTCCTTGGAAAGTTCTGGCTTCACCAATCCAGTCTTGTCCATCTaGTTTAAAAAGCAGATCCGG | + |
|
Preference number: 3 (lower is better) Translates to: FFFVYDIHHSLESSGFTNPVLSI*FKKQIR Trigger: CCGGATCTGCTTTTTAAACAAGATGGACAAGACTGG...ATTGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGTCGTAAACAAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACTAAATTCACCTAAAACCAAGTCAGCAAACTCATCATCTAAGTCTGCAACTCGGGGTATTTTGTGTTaGTCAGCTTGCCTCCATACA | + |
|
Preference number: 3 (lower is better) Translates to: SLNSPKTKSANSSSKSATRGILC*SACLHT Trigger: TGTATGGAGGCAAGCTGACAAACACAAAATACCCCG...AGTTGCAGACTTAGATGATGAGTTTGCTGACTTGGTTTTAGGTGAATTTAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGTCCCTGGAGGCATaGACTGTGGACGGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAQASGLCSRGWCCLGRLRSLEA*TVDGTF Trigger: GAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCT...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTCTTGCCTCCATACAGTaGGAGTCTGGGCCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: QAQASGLCSRGWCCLGRLLASIQ*ESGPLH Trigger: GTGTAGAGGCCCAGACTCTCACTGTATGGAGGCAAG...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGGCTGCGCACCCCGCGGCTTCTGCATACACCGTaGGATGCAGGCAGTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: MCHKPREGSSALGLRTPRLLHTP*DAGSDH Trigger: ATGGTCACTGCCTGCATCTCACGGTGTATGCAGAAG...CCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGCCTCCCGAGAGGCCTaGAGCAGGTCTTCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: APGGGAVWGGLGSVSWLQASREA*SRSSPT Trigger: TGTGGGTGAAGACCTGCTGCAGGCCTCTCGGGAGGC...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGGCTGCGCACCCCGCGGCTTGACATCACTTCCTaGTATGCCTGGTGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: MCHKPREGSSALGLRTPRLDITS*YAWCRT Trigger: AGTTCTGCACCAGGCATAGCAGGAAGTGATGTCAAG...CCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGGCTGCGCACCCCGCGGACTTGGACGAGACTATaGTGTCTCCAGTGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MCHKPREGSSALGLRTPRTWTRL*CLQWQF Trigger: AAACTGCCACTGGAGACACCATAGTCTCGTCCAAGT...CCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACACCGAGCAGAGGTCCCTaGAGGCATGCACTGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRTRAQALDLRNHTTPSRGP*RHALWT Trigger: CGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCGG...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | CAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTaGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QASGLCSRGWCC*GRLRQCILASG Trigger: TCCTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGAGAGTCACAGCTGCTaGCTGGATGGTAATGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: APGGGAVWGGLGSVSWLQESHSC*LDGNAP Trigger: AGGGGCATTACCATCCAGTCAGCAGCTGTGACTCTC...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGCTTGCCTCCATACAGTaGGAGTCTGGGCCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCSRGWCCLGRLRQCILLASIQ*ESGPLH Trigger: GTGTAGAGGCCCAGACTCTCACTGTATGGAGGCAAG...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTCGGAATGAAGAGACTTaGCATCACTTCCTGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: QAQASGLCSRGWCCLGRLRNEET*HHFLLC Trigger: GCATAGCAGGAAGTGATGTCAAGTCTCTTCATTCCG...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCGCCTCCCGAGAGGCCTaGAGCAGGTCTTCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALDLRNHTTIPAPGGWNIASREA*SRSSPT Trigger: TGTGGGTGAAGACCTGCTGCAGGCCTCTCGGGAGGC...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTGGATTCTCTCTGTGGTaGTGGTTTTGCCTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAQASGLCSRGWCCLGRLGFSLW*WFCLHQ Trigger: TTGATGCAGGCAAAACCACCACCACAGAGAGAATCC...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTACTTGGACGAGACTATaGTGTCTCCAGTGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QAQASGLCSRGWCCLGRLTWTRL*CLQWQF Trigger: AAACTGCCACTGGAGACACCATAGTCTCGTCCAAGT...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACAGAAGAAGACAGGCTCTaGGACCTCCACCCCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRTRAQALDLRNHTTEEDRL*DLHPGQ Trigger: TTGGCCGGGGTGGAGGTCCCAGAGCCTGTCTTCTTC...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGAAGAAGACAGGCTCTaGGACCTCCACCCCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ELRPWISVITPQFQLQGDEEDRL*DLHPGQ Trigger: TTGGCCGGGGTGGAGGTCCCAGAGCCTGTCTTCTTC...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGTGGAGGCATGCACTGTaGACGGCACTTTCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: APGGGAVWGGLGSVSWLQWRHAL*TALSMA Trigger: GGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCA...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | TATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCCCGAGCAGAGGTCCCTaGAGGCATGCACTGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: YFIPAPEMAEITGAQLWCPSRGP*RHALWT Trigger: CGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCGG...GCACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGCCCCTTTCTCGCTCTTaGGCCATGAAATCCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLCSRGWCCLGRLRQCILPLSRS*AMKSVT Trigger: AGTGACGGATTTCATGGCTCAAGAGCGAGAAAGGGG...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGCTCCTCGTCCGGCTCTaGGAGCTGCAGCTAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLRYLRSLLQRTRAQALLLVRL*ELQLMR Trigger: GCGCATTAGCTGCAGCTCGCAGAGCCGGACGAGGAG...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCTCCTCGTCCGGCTCTaGGAGCTGCAGCTAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVLLVRL*ELQLMR Trigger: GCGCATTAGCTGCAGCTCGCAGAGCCGGACGAGGAG...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAGCCTCCCGAGAGGCCTaGAGCAGGTCTTCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSASREA*SRSSPT Trigger: TGTGGGTGAAGACCTGCTGCAGGCCTCTCGGGAGGC...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AGGCACTGCTCTATTAAGATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGCCTCCCGAGAGGCCTaGAGCAGGTCTTCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RHCSIKMCHKPREGSSALASREA*SRSSPT Trigger: TGTGGGTGAAGACCTGCTGCAGGCCTCTCGGGAGGC...CAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACATCTTAATAGAGCAGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGCCACATCCTGGACTaGGGATCCGAGCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGYFIPAPEMAEITGAQLCHILD*GSEQRS Trigger: GGACCTCTGCTCGGATCCCCAGTCCAGGATGTGGCA...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGCGGAATGAAGAGACTTaGCATCACTTCCTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLCSRGWCCLGRLRQCILRNEET*HHFLLV Trigger: CACCAGCAGGAAGTGATGTCAAGTCTCTTCATTCCG...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022170.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTGGGTTAATGACGGAATaGAGAGACTTGACATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QAQASGLCSRGWCCLGRLGLMTE*RDLTSL Trigger: AAGTGATGTCAAGTCTCTTCATTCCGTCATTAACCC...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGAGAGTCACAGCTGCTaGCTGGATGGTAATGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELRPWISVITPQFQLQGDESHSC*LDGNAP Trigger: AGGGGCATTACCATCCAGTCAGCAGCTGTGACTCTC...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATACTCCCTGCTCACTGTaGCCTCGAGACTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELRPWISVITPQFQLQGDTPCSL*PRDSSE Trigger: CTCTGATGAGTCTCGAGGTCACAGTGAGCAGGGAGT...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCAGGCACTGCAGCCTGTaGCAGTGTCACCCTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDLRNHTTIPAPGGWNIRHCSL*QCHPVY Trigger: GTACACAGGGTGACACTGGCACAGGCTGCAGTGCCT...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCCAGCATTCCACAGCCAGGGGATTGGTACTCAAGTGGTGGCTGCCTTGTTCTCCTCGTCCGGCTCTaGGAGCTGCAGCTAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSIPQPGDWYSSGGCLVLLVRL*ELQLMR Trigger: GCGCATTAGCTGCAGCTCGCAGAGCCGGACGAGGAG...AACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTGGAATGCTGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGTCACAGCTGCTGACTaGATGGTAATGCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: APGGGAVWGGLGSVSWLQVTAAD*MVMPLS Trigger: AGAAAGGGGCATTACCATCCAGTCAGCAGCTGTGAC...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGAACCGCGAAGACTCCATCTCAGGCCCGGAGTGATGGCTCTGTGGGACTGCAGCTAATGCGCTaGACTTGGACGAGACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: EVRTAKTPSQARSDGSVGLQLMR*TWTRLW Trigger: CCATAGTCTCGTCCAAGTCCAGCGCATTAGCTGCAG...TCCCACAGAGCCATCACTCCGGGCCTGAGATGGAGTCTTCGCGGTTCTTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACATGGAGGCATGCACTGTaGACGGCACTTTCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRTRAQALDLRNHTTWRHAL*TALSMA Trigger: GGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCA...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTCCGAGCAGAGGTCCCTaGAGGCATGCACTGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KKAEVFKITLAEDPSSGPPSRGP*RHALWT Trigger: CGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCGG...AGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATGCCACATCCTGGACTaGGGATCCGAGCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSCHILD*GSEQRS Trigger: GGACCTCTGCTCGGATCCCCAGTCCAGGATGTGGCA...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGGCACTGCTCTATTAAGATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGTGCCACATCCTGGACTaGGGATCCGAGCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHCSIKMCHKPREGSSALCHILD*GSEQRS Trigger: GGACCTCTGCTCGGATCCCCAGTCCAGGATGTGGCA...CAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACATCTTAATAGAGCAGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGACTCCCTGCTCACTGTaGCCTCGAGACTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGYFIPAPEMAEITGAQLTPCSL*PRDSSE Trigger: CTCTGATGAGTCTCGAGGTCACAGTGAGCAGGGAGT...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAAGGTCCCTGGAGGCATaGACTGTGGACGGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSRSLEA*TVDGTF Trigger: GAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCT...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGTTCCCTCTTCTTTGTaGCAAGTCTGCCAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELRPWISVITPQFQLQGDVPSSL*QVCQDR Trigger: CCTGTCCTGGCAGACTTGGCACAAAGAAGAGGGAAC...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACACTGCAGCTAATGCGCTaGACTTGGACGAGACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRTRAQALDLRNHTTLQLMR*TWTRLW Trigger: CCATAGTCTCGTCCAAGTCCAGCGCATTAGCTGCAG...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGAAGAAGACAGGCTCTaGGACCTCCACCCCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KKAEVFKITLAEDPSSGPEEDRL*DLHPGQ Trigger: TTGGCCGGGGTGGAGGTCCCAGAGCCTGTCTTCTTC...AGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLCSRGWCCLGRLRQCILVSLSN*DLRAEG Trigger: GCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAAC...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | GGACCTGACTGTGAGCCCCAGCACTGGCTTTCAGAGTaGAATGTTCTGTCAGCAGTCAGGACAGATGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: GPDCEPQHWLSE*NVLSAVRTDGR Trigger: CCGTCCATCTGTCCTGACTGCTGACAGAACATTCAACTCTGAAAGCCAGTGCTGGGGCTCACAGTCAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGCTTCTGCATACACCGTaGGATGCAGGCAGTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGYFIPAPEMAEITGAQLLLHTP*DAGSDH Trigger: ATGGTCACTGCCTGCATCTCACGGTGTATGCAGAAG...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTTCTCTGATGATTCACTaGAAAAATCCTCCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAQASGLCSRGWCCLGRLSLMIH*KNPPFG Trigger: ACCAAATGGAGGATTTTTGCAGTGAATCATCAGAGA...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCAGGCACTGCAGCCTGTaGCAGTGTCACCCTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETTSPIPESRTYLCCARFRHCSL*QCHPVY Trigger: GTACACAGGGTGACACTGGCACAGGCTGCAGTGCCT...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | TATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCGTTCCCTCTTCTTTGTaGCAAGTCTGCCAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YFIPAPEMAEITGAQLWCVPSSL*QVCQDR Trigger: CCTGTCCTGGCAGACTTGGCACAAAGAAGAGGGAAC...GCACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGTCCTGCTATGCCTGGTaGAGAACTGTAGTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: APGGGAVWGGLGSVSWLQSCYAW*RTVVSC Trigger: ACAAGAAACTACAGTTCTGCACCAGGCATAGCAGGA...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGCTGCAGCTAATGCGCTaGACTTGGACGAGACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGYFIPAPEMAEITGAQLLQLMR*TWTRLW Trigger: CCATAGTCTCGTCCAAGTCCAGCGCATTAGCTGCAG...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGAACTGAGTTTAAGATaGTTTCCCGGTATGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: APGGGAVWGGLGSVSWLQELSLR*FPGMPP Trigger: AGGTGGCATACCGGGAAACCATCTTAAACTCAGTTC...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATGGAGGCATGCACTGTaGACGGCACTTTCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSWRHAL*TALSMA Trigger: GGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCA...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | CACAGCCAGGGGATTGGTACTCAAGTGGTGGCTGCCTaGTTAGAAAATCCAGACAGAGCACTTCCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSQGIGTQVVAA*LENPDRALPGS Trigger: ACTCCCGGGAAGTGCTCTGTCTGGATTTTCTAACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CAA 72 bp | CACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTaGCTCCTTACCATTGCTACCCATGCCTGTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSPCPTGPGAAL*LLTIATHACWH Trigger: ATGCCAACAGGCATGGGTAGCAATGGTAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGGGTTAATGACGGAATaGAGAGACTTGACATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GLCSRGWCCLGRLRQCILGLMTE*RDLTSL Trigger: AAGTGATGTCAAGTCTCTTCATTCCGTCATTAACCC...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | AGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTCTCGCTCTTGAGCCATaGAATCCGTCACTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RYLRSLLQRTRAQALDLRLALEP*NPSLCL Trigger: GAGACACAGTGACGGATTTCATGGCTCAAGAGCGAG...ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCTCGCTCTTGAGCCATaGAATCCGTCACTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVLALEP*NPSLCL Trigger: GAGACACAGTGACGGATTTCATGGCTCAAGAGCGAG...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGCTCGCTCTTGAGCCATaGAATCCGTCACTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLRYLRSLLQRTRAQALLALEP*NPSLCL Trigger: GAGACACAGTGACGGATTTCATGGCTCAAGAGCGAG...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGACTCACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTGCTCCTTACTCGCTCTTGAGCCATaGAATCCGTCACTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLTPLVLQDLEQLFCSLLALEP*NPSLCL Trigger: GAGACACAGTGACGGATTTCATGGCTCAAGAGCGAG...TAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTGAGTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCACCCCTTTCTCGCTCTTaGGCCATGAAATCCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSPLSRS*AMKSVT Trigger: AGTGACGGATTTCATGGCTCAAGAGCGAGAAAGGGG...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCCCCTTTCTCGCTCTTaGGCCATGAAATCCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVPLSRS*AMKSVT Trigger: AGTGACGGATTTCATGGCTCAAGAGCGAGAAAGGGG...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCCTTGCCTCCATACAGTaGGAGTCTGGGCCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ETTSPIPESRTYLCCARFLASIQ*ESGPLH Trigger: GTGTAGAGGCCCAGACTCTCACTGTATGGAGGCAAG...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCACTGCTCTATTAAGATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGCAGCCATCAGCCAGCTaGAGGGACATAATCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHCSIKMCHKPREGSSALQPSAS*RDIISA Trigger: AGCAGAGATTATGTCCCTTCAGCTGGCTGATGGCTG...CAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACATCTTAATAGAGCAGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATACTTGGACGAGACTATaGTGTCTCCAGTGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELRPWISVITPQFQLQGDTWTRL*CLQWQF Trigger: AAACTGCCACTGGAGACACCATAGTCTCGTCCAAGT...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGCTGCAGCTAATGCGCTaGACTTGGACGAGACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLRYLRSLLQRTRAQALLQLMR*TWTRLW Trigger: CCATAGTCTCGTCCAAGTCCAGCGCATTAGCTGCAG...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | AGGCTAGAAAGAAGGCTGAGGTATTTAAGATCACTCTaGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLERRLRYLRSL*QRTRAQALDLR Trigger: ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTTTCTAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTAAGAACCGCGAAGACTCCATCTCAGGCCCGGAGTGATGGCTCTGTGGGAGGGTTAATGACGGAATaGAGAGACTTGACATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EVRTAKTPSQARSDGSVGGLMTE*RDLTSL Trigger: AAGTGATGTCAAGTCTCTTCATTCCGTCATTAACCC...TCCCACAGAGCCATCACTCCGGGCCTGAGATGGAGTCTTCGCGGTTCTTACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTCCCCTTTTCCTACCTTTCTCTGCTACCTGGACTACACAACATAGCTGGGAGAGTCACAGCTGCTaGCTGGATGGTAATGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLFLPFSATWTTQHSWESHSC*LDGNAP Trigger: AGGGGCATTACCATCCAGTCAGCAGCTGTGACTCTC...CCAGCTATGTTGTGTAGTCCAGGTAGCAGAGAAAGGTAGGAAAAGGGGAAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGAGTATCAATCAGATTaGCTCTATACCCTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: APGGGAVWGGLGSVSWLQEYQSD*LYTLSS Trigger: ACTGGAAAGGGTATAGAGTCAATCTGATTGATACTC...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGAGTATCAATCAGATTaGCTCTATACCCTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLCSRGWCCLGRLRQCILEYQSD*LYTLSS Trigger: ACTGGAAAGGGTATAGAGTCAATCTGATTGATACTC...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATTTGTGTTTGTCAGCTTaGCTCCATACAGTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELRPWISVITPQFQLQGDLCLSA*LHTVRV Trigger: GACTCTCACTGTATGGAGGCAAGCTGACAAACACAA...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGCTTGACATCACTTCCTaGTATGCCTGGTGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PGYFIPAPEMAEITGAQLLDITS*YAWCRT Trigger: AGTTCTGCACCAGGCATAGCAGGAAGTGATGTCAAG...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCGGATTCTCTCTGTGGTaGTGGTTTTGCCTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALDLRNHTTIPAPGGWNIGFSLW*WFCLHQ Trigger: TTGATGCAGGCAAAACCACCACCACAGAGAGAATCC...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGACAGGATTCTCTCTGTaGTGGTGGTTTTGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGYFIPAPEMAEITGAQLTGFSL*WWFCLH Trigger: ATGCAGGCAAAACCACCACCACAGAGAGAATCCTGT...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGTCACAGCTGCTGACTaGATGGTAATGCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLRYLRSLLQRTRAQALVTAAD*MVMPLS Trigger: AGAAAGGGGCATTACCATCCAGTCAGCAGCTGTGAC...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCCTGCATCAATATGTaGCATAATTCCAATATTACG | + |
|
Preference number: 4 (lower is better) Translates to: GLCSRGWCCLGRLRQCILACINM*HNSNIT Trigger: CGTAATATTGGAATTATGGCACATATTGATGCAGGC...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCCTCCTCGTCCGGCTCTaGGAGCTGCAGCTAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NISKVKQEMSKRGPLLTGLLVRL*ELQLMR Trigger: GCGCATTAGCTGCAGCTCGCAGAGCCGGACGAGGAG...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AGGCACTGCTCTATTAAGATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGCATCACTTCCTGCTATaGCTGGTGCAGAACTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHCSIKMCHKPREGSSALHHFLL*LVQNCS Trigger: ACTACAGTTCTGCACCAGGCATAGCAGGAAGTGATG...CAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACATCTTAATAGAGCAGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCACTTGACATCACTTCCTaGTATGCCTGGTGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSLDITS*YAWCRT Trigger: AGTTCTGCACCAGGCATAGCAGGAAGTGATGTCAAG...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATTTCTCTCTGTGGTGGTaGTTTTGCCTGCATCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ELRPWISVITPQFQLQGDFSLWW*FCLHQY Trigger: ATATTGATGCAGGCAAAACCACCACCACAGAGAGAA...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGGGATTCTCTCTGTGGTaGTGGTTTTGCCTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVGFSLW*WFCLHQ Trigger: TTGATGCAGGCAAAACCACCACCACAGAGAGAATCC...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGACAGGATTCTCTCTGTaGTGGTGGTTTTGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLRYLRSLLQRTRAQALTGFSL*WWFCLH Trigger: ATGCAGGCAAAACCACCACCACAGAGAGAATCCTGT...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTACATCCACCACTCCTTaGAAAGTTCTGGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RYLRSLLQRTRAQALDLRTSTTP*KVLASP Trigger: TGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGT...ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | TGGGGTGGGAGGGCTCACTGTTCACTGCTGAACTGTTaGCTACAGACAGACTCAAGGGCCATTACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WGGRAHCSLLNC*LQTDSRAITSV Trigger: AACTGAAGTAATGGCCCTTGAGTCTGTCTGTAGCAAACAGTTCAGCAGTGAACAGTGAGCCCTCCCACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGAGTTCGAAGCACAGTTaGATATCCCATAATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGYFIPAPEMAEITGAQLSSKHS*ISHNLC Trigger: GCAGAGATTATGGGATATTCAACTGTGCTTCGAACT...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | TATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCAGTTCGAAGCACAGTTaGATATCCCATAATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFIPAPEMAEITGAQLWCSSKHS*ISHNLC Trigger: GCAGAGATTATGGGATATTCAACTGTGCTTCGAACT...GCACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCACTTGACATCACTTCCTaGTGGTGCAGAACTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSLDITS*WCRTVV Trigger: AACTACAGTTCTGCACCAGCAGGAAGTGATGTCAAG...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022170.8 |
||
| CDS-3UTR GCA 90 bp | AGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTTTGTGTTTGTCAGCTTaGCTCCATACAGTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RYLRSLLQRTRAQALDLRLCLSA*LHTVRV Trigger: GACTCTCACTGTATGGAGGCAAGCTGACAAACACAA...ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAGACATCACTTCCTGCTaGTGCAGAACTGTAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSDITSC*CRTVVS Trigger: AGAAACTACAGTTCTGCACCAGCAGGAAGTGATGTC...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022170.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCGGATTCTCTCTGTGGTaGTGGTTTTGCCTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETTSPIPESRTYLCCARFGFSLW*WFCLHQ Trigger: TTGATGCAGGCAAAACCACCACCACAGAGAGAATCC...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETTSPIPESRTYLCCARFVSLSN*DLRAEG Trigger: GCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAAC...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGGAACTGAGTTTAAGATaGTTTCCCGGTATGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVELSLR*FPGMPP Trigger: AGGTGGCATACCGGGAAACCATCTTAAACTCAGTTC...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATGAACTGAGTTTAAGATaGTTTCCCGGTATGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSLALALQRAALCGYCHELSLR*FPGMPP Trigger: AGGTGGCATACCGGGAAACCATCTTAAACTCAGTTC...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAACCGAGCAGAGGTCCCTaGAGGCATGCACTGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: IQGFMKRKGFGSDFRRLEPSRGP*RHALWT Trigger: CGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCGG...TTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACCTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAATGCCACATCCTGGACTaGGGATCCGAGCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKCHILD*GSEQRS Trigger: GGACCTCTGCTCGGATCCCCAGTCCAGGATGTGGCA...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATGGGTTAATGACGGAATaGAGAGACTTGACATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RKSLALALQRAALCGYCHGLMTE*RDLTSL Trigger: AAGTGATGTCAAGTCTCTTCATTCCGTCATTAACCC...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCGAGTATCAATCAGATTaGCTCTATACCCTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALDLRNHTTIPAPGGWNIEYQSD*LYTLSS Trigger: ACTGGAAAGGGTATAGAGTCAATCTGATTGATACTC...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATAGTTCGAAGCACAGTTaGATATCCCATAATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSLALALQRAALCGYCHSSKHS*ISHNLC Trigger: GCAGAGATTATGGGATATTCAACTGTGCTTCGAACT...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTTTGTGTTTGTCAGCTTaGCTCCATACAGTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKAEVFKITLAEDPSSGPLCLSA*LHTVRV Trigger: GACTCTCACTGTATGGAGGCAAGCTGACAAACACAA...AGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGAACATCCGCATAGTTAAAACTTaGTCCAGTCTTGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALDLRNHTTIPAPGGWNIRIVKT*SSLVHL Trigger: AAGATGGACAAGACTGGAGCAAGTTTTAACTATGCG...GATGTTCCATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCAGGCACTGCAGCCTGTaGCAGTGTCACCCTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NISKVKQEMSKRGPLLTGRHCSL*QCHPVY Trigger: GTACACAGGGTGACACTGGCACAGGCTGCAGTGCCT...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCAGGCACTGCAGCCTGTaGCAGTGTCACCCTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GWNISKVKQEMSKRGPLLRHCSL*QCHPVY Trigger: GTACACAGGGTGACACTGGCACAGGCTGCAGTGCCT...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCAGGTCCCTGGAGGCATaGACTGTGGACGGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NISKVKQEMSKRGPLLTGRSLEA*TVDGTF Trigger: GAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCT...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATTTCTCTCTGTGGTGGTaGTTTTGCCTGCATCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RKSLALALQRAALCGYCHFSLWW*FCLHQY Trigger: ATATTGATGCAGGCAAAACCACCACCACAGAGAGAA...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATTCTCTCTGTGGTGGTaGTTTTGCCTGCATCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSFSLWW*FCLHQY Trigger: ATATTGATGCAGGCAAAACCACCACCACAGAGAGAA...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AGGCACTGCTCTATTAAGATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGTTCTCTCTGTGGTGGTaGTTTTGCCTGCATCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RHCSIKMCHKPREGSSALFSLWW*FCLHQY Trigger: ATATTGATGCAGGCAAAACCACCACCACAGAGAGAA...CAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACATCTTAATAGAGCAGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATATGTTGGTCAGCAAATaGCAAAAGCAGACGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKSLALALQRAALCGYCHMLVSK*QKQTTH Trigger: ATGAGTCGTCTGCTTTTGCCATTTGCTGACCAACAT...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAATGTTGGTCAGCAAATaGCAAAAGCAGACGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSMLVSK*QKQTTH Trigger: ATGAGTCGTCTGCTTTTGCCATTTGCTGACCAACAT...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAAGAAGAAGACAGGCTCTaGGACCTCCACCCCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IQGFMKRKGFGSDFRRLEEEDRL*DLHPGQ Trigger: TTGGCCGGGGTGGAGGTCCCAGAGCCTGTCTTCTTC...TTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACCTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAGCATTCCACAGCCAGGGGATTGGTACTCAAGTGGTGGCTGCCTTGTTGAACTGAGTTTAAGATaGTTTCCCGGTATGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSIPQPGDWYSSGGCLVELSLR*FPGMPP Trigger: AGGTGGCATACCGGGAAACCATCTTAAACTCAGTTC...AACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTGGAATGCTGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CAA 72 bp | TGGCTTCACCAATTGGCAGCTGTAAAATCAGGGGCTTaGCCTTTAACTTCTCCCGGATGCTTTCAACCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLHQLAAVKSGA*PLTSPGCFQPH Trigger: ATGCGGTTGAAAGCATCCGGGAGAAGTTAAAGGCAAAGCCCCTGATTTTACAGCTGCCAATTGGTGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| CDS-3UTR TCA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAAGAGAGTCACAGCTGCTaGCTGGATGGTAATGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKESHSC*LDGNAP Trigger: AGGGGCATTACCATCCAGTCAGCAGCTGTGACTCTC...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCCTTGCCTCCATACAGTaGGAGTCTGGGCCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GWNISKVKQEMSKRGPLLLASIQ*ESGPLH Trigger: GTGTAGAGGCCCAGACTCTCACTGTATGGAGGCAAG...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTCTTCTGCATACACCGTaGGATGCAGGCAGTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSLLHTP*DAGSDH Trigger: ATGGTCACTGCCTGCATCTCACGGTGTATGCAGAAG...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATCGCATAGTTAAAACTTaGTCCAGTCTTGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKSLALALQRAALCGYCHRIVKT*SSLVHL Trigger: AAGATGGACAAGACTGGAGCAAGTTTTAACTATGCG...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAAGGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAAAGGTCCCTGGAGGCATaGACTGTGGACGGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQGFMKRKGFGSDFRRLERSLEA*TVDGTF Trigger: GAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCT...TTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACCTTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTGTTCCCTCTTCTTTGTaGCAAGTCTGCCAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSVPSSL*QVCQDR Trigger: CCTGTCCTGGCAGACTTGGCACAAAGAAGAGGGAAC...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | TGCGTTGCTACCCAGCTTTGCTTGGTTCTTCTATACCAGTGGTTCTCAACCTGTACATCCACCACTCCTTaGAAAGTTCTGGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CVATQLCLVLLYQWFSTCTSTTP*KVLASP Trigger: TGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGT...ACAGGTTGAGAACCACTGGTATAGAAGAACCAAGCAAAGCTGGGTAGCAACGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAGGTGACAGTTTCCTTTCTTCCAAGAAACCTTTGGAAACCCAAGAGATTTGGAGGCATGCACTGTaGACGGCACTTTCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGDSFLSSKKPLETQEIWRHAL*TALSMA Trigger: GGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCA...AATCTCTTGGGTTTCCAAAGGTTTCTTGGAAGAAAGGAAACTGTCACCTAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | CTGTACCCTGTTCTCTTTATAATGCTGAGCATTTTGCATTTAGAAGCTGGCTGCCCCCTTTCTCGCTCTTaGGCCATGAAATCCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LYPVLFIMLSILHLEAGCPLSRS*AMKSVT Trigger: AGTGACGGATTTCATGGCTCAAGAGCGAGAAAGGGG...GCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAAGAGAACAGGGTACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAACTTCTGCATACACCGTaGGATGCAGGCAGTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKLLHTP*DAGSDH Trigger: ATGGTCACTGCCTGCATCTCACGGTGTATGCAGAAG...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAATCCTTTACTCCCTGCTCACTGTaGCCTCGAGACTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFMKRKGFGSDFRRLESFTPCSL*PRDSSE Trigger: CTCTGATGAGTCTCGAGGTCACAGTGAGCAGGGAGT...AAAGGATTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATTCTCTGATGATTCACTaGAAAAATCCTCCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKSLALALQRAALCGYCHSLMIH*KNPPFG Trigger: ACCAAATGGAGGATTTTTGCAGTGAATCATCAGAGA...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAGCCTGCATCAATATGTaGCATAATTCCAATATTACG | + |
|
Preference number: 4 (lower is better) Translates to: KEKPCTSTPEGCPVWILSACINM*HNSNIT Trigger: CGTAATATTGGAATTATGGCACATATTGATGCAGGC...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGGTGACAGTTTCCTTTCTTCCAAGAAACCTTTGGAAACCCAAGAGATTGTTCCCTCTTCTTTGTaGCAAGTCTGCCAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLGDSFLSSKKPLETQEIVPSSL*QVCQDR Trigger: CCTGTCCTGGCAGACTTGGCACAAAGAAGAGGGAAC...AATCTCTTGGGTTTCCAAAGGTTTCTTGGAAGAAAGGAAACTGTCACCTAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CAA 72 bp | TTCCAAAGGGTGAGCTATATGCGTTGCTACCCAGCTTaGCTTGGTTCTTCTATACCAGTGGTTCTCAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQRVSYMRCYPA*LGSSIPVVLNL Trigger: CAGGTTGAGAACCACTGGTATAGAAGAACCAAGCAAAGCTGGGTAGCAACGCATATAGCTCACCCTTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTTCTCTGATGATTCACTaGAAAAATCCTCCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKAEVFKITLAEDPSSGPSLMIH*KNPPFG Trigger: ACCAAATGGAGGATTTTTGCAGTGAATCATCAGAGA...AGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCCCCAGCACTGGCTTTCAGAGTTGAATGTTCTGTCAGCAGTCAGGACATCTCTGATGATTCACTaGAAAAATCCTCCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CEPQHWLSELNVLSAVRTSLMIH*KNPPFG Trigger: ACCAAATGGAGGATTTTTGCAGTGAATCATCAGAGA...TGTCCTGACTGCTGACAGAACATTCAACTCTGAAAGCCAGTGCTGGGGCTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCGCCTGCATCAATATGTaGCATAATTCCAATATTACG | + |
|
Preference number: 4 (lower is better) Translates to: ETTSPIPESRTYLCCARFACINM*HNSNIT Trigger: CGTAATATTGGAATTATGGCACATATTGATGCAGGC...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTCCCCTTTTCCTACCTTTCTCTGCTACCTGGACTACACAACATAGCTGGCGCATAGTTAAAACTTaGTCCAGTCTTGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLFLPFSATWTTQHSWRIVKT*SSLVHL Trigger: AAGATGGACAAGACTGGAGCAAGTTTTAACTATGCG...CCAGCTATGTTGTGTAGTCCAGGTAGCAGAGAAAGGTAGGAAAAGGGGAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTACATCCACCACTCCTTaGAAAGTTCTGGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSTSTTP*KVLASP Trigger: TGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGT...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTACTTGGACGAGACTATaGTGTCTCCAGTGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSTWTRL*CLQWQF Trigger: AAACTGCCACTGGAGACACCATAGTCTCGTCCAAGT...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSVSLSN*DLRAEG Trigger: GCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAAC...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCCGGAATGAAGAGACTTaGCATCACTTCCTGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: NISKVKQEMSKRGPLLTGRNEET*HHFLLC Trigger: GCATAGCAGGAAGTGATGTCAAGTCTCTTCATTCCG...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR TCA 90 bp | CTGTACCCTGTTCTCTTTATAATGCTGAGCATTTTGCATTTAGAAGCTGGCTGCCGGAATGAAGAGACTTaGCATCACTTCCTGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LYPVLFIMLSILHLEAGCRNEET*HHFLLC Trigger: GCATAGCAGGAAGTGATGTCAAGTCTCTTCATTCCG...GCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAAGAGAACAGGGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCCATCACTTCCTGCTATaGCTGGTGCAGAACTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GWNISKVKQEMSKRGPLLHHFLL*LVQNCS Trigger: ACTACAGTTCTGCACCAGGCATAGCAGGAAGTGATG...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCCATCACTTCCTGCTATaGCTGGTGCAGAACTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NISKVKQEMSKRGPLLTGHHFLL*LVQNCS Trigger: ACTACAGTTCTGCACCAGGCATAGCAGGAAGTGATG...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAAACAGGATTCTCTCTGTaGTGGTGGTTTTGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKTGFSL*WWFCLH Trigger: ATGCAGGCAAAACCACCACCACAGAGAGAATCCTGT...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACCCTGTTCTCTTTATAATGCTGAGCATTTTGCATTTAGAAGCTGGCTGCACAGGATTCTCTCTGTaGTGGTGGTTTTGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYPVLFIMLSILHLEAGCTGFSL*WWFCLH Trigger: ATGCAGGCAAAACCACCACCACAGAGAGAATCCTGT...GCAGCCAGCTTCTAAATGCAAAATGCTCAGCATTATAAAGAGAACAGGGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAAGTCACAGCTGCTGACTaGATGGTAATGCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQGFMKRKGFGSDFRRLEVTAAD*MVMPLS Trigger: AGAAAGGGGCATTACCATCCAGTCAGCAGCTGTGAC...TTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACCTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAAACATCCACCACTCCTTaGAAAGTTCTGGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKTSTTP*KVLASP Trigger: TGGTGAAGCCAGAACTTTCCAAGGAGTGGTGGATGT...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGCTGCAAACTGGTTTTCTAGGGCTCAGAGTTCATTCACACTGTTCCTAATGTTGGTCAGCAAATaGCAAAAGCAGACGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLAANWFSRAQSSFTLFLMLVSK*QKQTTH Trigger: ATGAGTCGTCTGCTTTTGCCATTTGCTGACCAACAT...TAGGAACAGTGTGAATGAACTCTGAGCCCTAGAAAACCAGTTTGCAGCCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWNISKVKQEMSKRGPLLVSLSN*DLRAEG Trigger: GCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAAC...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | ACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTaGTCAAGTTCTTTCCACACCAAAGCAGCAATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TPNRIRMAAPRV*SSSFHTKAAIY Trigger: GTAAATTGCTGCTTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | AGGCTAGGTGACAGTTTCCTTTCTTCCAAGAAACCTTaGGAAACCCAAGAGATTAGAGTTCTGTTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGDSFLSSKKP*ETQEIRVLLGQ Trigger: CTGTCCCAACAGAACTCTAATCTCTTGGGTTTCCAAAGGTTTCTTGGAAGAAAGGAAACTGTCACCTAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CAA 72 bp | CTGCAACTTGTTCAATTAAGGAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCCGATCACTCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQLVQLRSSLLQ*SPLAVPDHSLL Trigger: CAGAAGCGAGTGATCGGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTGAACAAGTTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGCTGCAAACTGGTTTTCTAGGGCTCAGAGTTCATTCACACTGTTCCTAGAGTATCAATCAGATTaGCTCTATACCCTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLAANWFSRAQSSFTLFLEYQSD*LYTLSS Trigger: ACTGGAAAGGGTATAGAGTCAATCTGATTGATACTC...TAGGAACAGTGTGAATGAACTCTGAGCCCTAGAAAACCAGTTTGCAGCCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCTCCTGCTATGCCTGGTaGAGAACTGTAGTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWNISKVKQEMSKRGPLLSCYAW*RTVVSC Trigger: ACAAGAAACTACAGTTCTGCACCAGGCATAGCAGGA...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAATCCTTTTTGTGTTTGTCAGCTTaGCTCCATACAGTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFMKRKGFGSDFRRLESFLCLSA*LHTVRV Trigger: GACTCTCACTGTATGGAGGCAAGCTGACAAACACAA...AAAGGATTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAATCCTTTTCCTGCTATGCCTGGTaGAGAACTGTAGTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFMKRKGFGSDFRRLESFSCYAW*RTVVSC Trigger: ACAAGAAACTACAGTTCTGCACCAGGCATAGCAGGA...AAAGGATTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CAA 72 bp | CATCTAAGTCTGCAACTTGTTCAATTAAGGAGTTCCTaGCTTCAATTGTCTCCTTTAGCAGTTCCCGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSLQLVQLRSS*LQLSPLAVPDH Trigger: GTGATCGGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTGAACAAGTTGCAGACTTAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160981.2 |
||
| CDS-3UTR GCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCCGCATAGTTAAAACTTaGTCCAGTCTTGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NISKVKQEMSKRGPLLTGRIVKT*SSLVHL Trigger: AAGATGGACAAGACTGGAGCAAGTTTTAACTATGCG...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR GCA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCGCCTGCATCAATATGTaGCATAATTCCAATATTACG | + |
|
Preference number: 4 (lower is better) Translates to: NISKVKQEMSKRGPLLTGACINM*HNSNIT Trigger: CGTAATATTGGAATTATGGCACATATTGATGCAGGC...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| 3UTR CAA 72 bp | TTTTGTGTGATATTGTTTCTTTCCAAGTGTTTGTCATaGACTAACTGCATTCTGTGCCAGCTAACAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FCVILFLSKCLS*TNCILCQLTAE Trigger: TTCAGCTGTTAGCTGGCACAGAATGCAGTTAGTCAATGACAAACACTTGGAAAGAAACAATATCACACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| 3UTR CAA 72 bp | GGCTCAGAGTTCATTCACACTGTTCCTATTGAGCTTTaGTGTGATATTGTTTCTTTCCAAGTGTTTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GSEFIHTVPIEL*CDIVSFQVFVI Trigger: AATGACAAACACTTGGAAAGAAACAATATCACACAAAAGCTCAATAGGAACAGTGTGAATGAACTCTGAGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS CCA 90 bp | TCCTGGACTGGGGATCCGAGCAGAGGTCCCTGGAGGCATGCACTGTaGACGGCACTTTCAATGGCCTCCCGAGAGGCCTGCAGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWTGDPSRGPWRHAL*TALSMASREACSRS Trigger: AGACCTGCTGCAGGCCTCTCGGGAGGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCGGATCCCCAGTCCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
||
| CDS CCA 90 bp | CGAGCAGAGGTCCCTGGAGGCATGCACTGTGGACGGCACTTTCAATaGCCTCCCGAGAGGCCTGCAGCAGGTCTTCACCCACACAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAEVPGGMHCGRHFQ*PPERPAAGLHPHSQ Trigger: CTGACTGTGTGGGTGAAGACCTGCTGCAGGCCTCTCGGGAGGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
||
| CDS CCA 90 bp | AGGCCTGCAGCAGGTCTTCACCCACACAGTCAGCATACTCGATCTTaGCCACAGCACAGGGCTCTTCTGCTGGCCGGACTTCCAGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPAAGLHPHSQHTRS*PQHRALLLAGLPAP Trigger: CGGAGCTGGAAGTCCGGCCAGCAGAAGAGCCCTGTGCTGTGGCCAAGATCGAGTATGCTGACTGTGTGGGTGAAGACCTGCTGCAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGGCTGCGCACCCCGCGGCAGATCCGGGGTATTTaGTGTTTGTCAGCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MCHKPREGSSALGLRTPRQIRGI*CLSACL Trigger: GAGGCAAGCTGACAAACACAAAATACCCCGGATCTG...CCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTTCTGTGGTGGTGGTTTaGCCTGCATCAATATGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAQASGLCSRGWCCLGRLSVVVV*PASICA Trigger: GGCACATATTGATGCAGGCAAAACCACCACCACAGA...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCACAAACCCAGGGAAGGGAGCTCAGCGCTGGGGCTGCGCACCCCGCGGCCAGTCTTGTCCATCTaGTTTAAAAAGCAGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MCHKPREGSSALGLRTPRPVLSI*FKKQIR Trigger: CCGGATCTGCTTTTTAAACAAGATGGACAAGACTGG...CCGCGGGGTGCGCAGCCCCAGCGCTGAGCTCCCTTCCCTGGGTTTGTGACACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGTCAGCATACTCGATCTaGGCCACAGCACAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLCSRGWCCLGRLRQCILSAYSI*ATAQGS Trigger: AGAGCCCTGTGCTGTGGCCAAGATCGAGTATGCTGA...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTAAGAACCGCGAAGACTCCATCTCAGGCCCGGAGTGATGGCTCTGTGGGAGTGAGTGCAACGTCATaGCCACATCCTGGACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EVRTAKTPSQARSDGSVGVSATS*PHPGLG Trigger: CCCCAGTCCAGGATGTGGCAATGACGTTGCACTCAC...TCCCACAGAGCCATCACTCCGGGCCTGAGATGGAGTCTTCGCGGTTCTTACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGGCTAATGCGCTGGACTaGGACGAGACTATGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: APGGGAVWGGLGSVSWLQANALD*DETMVS Trigger: AGACACCATAGTCTCGTCCAAGTCCAGCGCATTAGC...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS TCA 90 bp | GCAGGCAGTGACCATAGTTGTGGAGGTGCCAGGGTGAATCATCAGTaGGTGCAACGTCATTGCCACATCCTGGACTGGGGATCCGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGSDHSCGGARVNHQ*VQRHCHILDWGSEQ Trigger: CTGCTCGGATCCCCAGTCCAGGATGTGGCAATGACGTTGCACTCACTGATGATTCACCCTGGCACCTCCACAACTATGGTCACTGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTAAGAACCGCGAAGACTCCATCTCAGGCCCGGAGTGATGGCTCTGTGGGATCCACACAGGACAGTTaGTCCAGAGTCAGGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EVRTAKTPSQARSDGSVGSTQDS*SRVRIE Trigger: CTCGATCCTGACTCTGGACAAACTGTCCTGTGTGGA...TCCCACAGAGCCATCACTCCGGGCCTGAGATGGAGTCTTCGCGGTTCTTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACATCAGCATACTCGATCTaGGCCACAGCACAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLQRTRAQALDLRNHTTSAYSI*ATAQGS Trigger: AGAGCCCTGTGCTGTGGCCAAGATCGAGTATGCTGA...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGGTGAGTGCAACGTCATaGCCACATCCTGGACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGYFIPAPEMAEITGAQLVSATS*PHPGLG Trigger: CCCCAGTCCAGGATGTGGCAATGACGTTGCACTCAC...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATGGTTCCAGCACCTGTTaGTCAGCTTTCTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELRPWISVITPQFQLQGDGSSTC*SAFFRA Trigger: GGCCCTGAAGAAAGCTGACAAACAGGTGCTGGAACC...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS TCA 90 bp | CACCGTGAGATGCAGGCAGTGACCATAGTTGTGGAGGTGCCAGGGTaGATCATCAGTGAGTGCAACGTCATTGCCACATCCTGGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HREMQAVTIVVEVPG*IISECNVIATSWTG Trigger: CCCAGTCCAGGATGTGGCAATGACGTTGCACTCACTGATGATTCACCCTGGCACCTCCACAACTATGGTCACTGCCTGCATCTCACGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
||
| CDS CCA 90 bp | TCACCAAGTGCCGCTTGTCTCCAAGCACCCTATCGAGGGTGTCTGTaGCGCGAACTGAGTTTAAGATGGTTTCCCGGTATGCCACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSAACLQAPYRGCL*RELSLRWFPGMPPA Trigger: TGCAGGTGGCATACCGGGAAACCATCTTAAACTCAGTTCGCGCCACAGACACCCTCGATAGGGTGCTTGGAGACAAGCGGCACTTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACATCCACACAGGACAGTTaGTCCAGAGTCAGGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQRTRAQALDLRNHTTSTQDS*SRVRIE Trigger: CTCGATCCTGACTCTGGACAAACTGTCCTGTGTGGA...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATGTGAGTGCAACGTCATaGCCACATCCTGGACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKSLALALQRAALCGYCHVSATS*PHPGLG Trigger: CCCCAGTCCAGGATGTGGCAATGACGTTGCACTCAC...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGGGTTCCAGCACCTGTTaGTCAGCTTTCTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGYFIPAPEMAEITGAQLGSSTC*SAFFRA Trigger: GGCCCTGAAGAAAGCTGACAAACAGGTGCTGGAACC...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGCCTAGAACAACTCTGTaGTCTTGGCGAGTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GLCSRGWCCLGRLRQCILPRTTL*SWRVWI Trigger: AATCCAGACTCGCCAAGACAACAGAGTTGTTCTAGG...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGGCTTCAGCCTAGAACAACTCTGTaGTCTTGGCGAGTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: APGGGAVWGGLGSVSWLQPRTTL*SWRVWI Trigger: AATCCAGACTCGCCAAGACAACAGAGTTGTTCTAGG...CTGAAGCCAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS CCA 90 bp | CAAGCACCCTATCGAGGGTGTCTGTGGCGCGAACTGAGTTTAAGATaGTTTCCCGGTATGCCACCTGCAGAGGCCCTAGATAGGTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QAPYRGCLWRELSLR*FPGMPPAEALDRSL Trigger: TAGAGACCTATCTAGGGCCTCTGCAGGTGGCATACCGGGAAACCATCTTAAACTCAGTTCGCGCCACAGACACCCTCGATAGGGTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACACAGATCCGGGGTATTTaGTGTTTGTCAGCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLQRTRAQALDLRNHTTQIRGI*CLSACL Trigger: GAGGCAAGCTGACAAACACAAAATACCCCGGATCTG...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCCAGGCTTCTGGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAAACTTGCTCCAGTCTaGTCCATCTTGTTTAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QAQASGLCSRGWCCLGRLKLAPV*SILFKK Trigger: CTTTTTAAACAAGATGGACAAGACTGGAGCAAGTTT...AAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCCAGAAGCCTGGGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GGACTCTGCTCCCGGGGGTGGTGCTGTTTGGGGAGGCTTAGGCAGTGTATCTTGAGGGGTCCTCGCTGTTaGTCATGTAGTACTTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLCSRGWCCLGRLRQCILRGPRC*SCSTLN Trigger: GTTTAAAGTACTACATGACAAACAGCGAGGACCCCT...CAAGATACACTGCCTAAGCCTCCCCAAACAGCACCACCCCCGGGAGCAGAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGTGAGTGCAACGTCATaGCCACATCCTGGACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KKAEVFKITLAEDPSSGPVSATS*PHPGLG Trigger: CCCCAGTCCAGGATGTGGCAATGACGTTGCACTCAC...AGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAGGTTCCAGCACCTGTTaGTCAGCTTTCTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KEKPCTSTPEGCPVWILSGSSTC*SAFFRA Trigger: GGCCCTGAAGAAAGCTGACAAACAGGTGCTGGAACC...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTCTGTGGTGGTGGTTTaGCCTGCATCAATATGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGYFIPAPEMAEITGAQLSVVVV*PASICA Trigger: GGCACATATTGATGCAGGCAAAACCACCACCACAGA...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACACGGGGTATTTTGTGTTaGTCAGCTTGCCTCCATACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLQRTRAQALDLRNHTTRGILC*SACLHT Trigger: TGTATGGAGGCAAGCTGACAAACACAAAATACCCCG...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATTTCTGGCTTCACCAATaGGCAGCTGTAAAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELRPWISVITPQFQLQGDFWLHQ*AAVKSG Trigger: CCCTGATTTTACAGCTGCCAATTGGTGAAGCCAGAA...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAGCTAATGCGCTGGACTaGGACGAGACTATGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEKPCTSTPEGCPVWILSANALD*DETMVS Trigger: AGACACCATAGTCTCGTCCAAGTCCAGCGCATTAGC...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCCCCAGCACTGGCTTTCAGAGTTGAATGTTCTGTCAGCAGTCAGGACATCAGCATACTCGATCTaGGCCACAGCACAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CEPQHWLSELNVLSAVRTSAYSI*ATAQGS Trigger: AGAGCCCTGTGCTGTGGCCAAGATCGAGTATGCTGA...TGTCCTGACTGCTGACAGAACATTCAACTCTGAAAGCCAGTGCTGGGGCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCGGTTCCAGCACCTGTTaGTCAGCTTTCTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETTSPIPESRTYLCCARFGSSTC*SAFFRA Trigger: GGCCCTGAAGAAAGCTGACAAACAGGTGCTGGAACC...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGAATGTTCCCTCTTCTTaGTGCCAAGTCTGCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGYFIPAPEMAEITGAQLNVPSS*CQVCQD Trigger: GTCCTGGCAGACTTGGCACAAAGAAGAGGGAACATT...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTTCTGTGGTGGTGGTTTaGCCTGCATCAATATGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RYLRSLLQRTRAQALDLRSVVVV*PASICA Trigger: GGCACATATTGATGCAGGCAAAACCACCACCACAGA...ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGCAGATCCGGGGTATTTaGTGTTTGTCAGCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRLRYLRSLLQRTRAQALQIRGI*CLSACL Trigger: GAGGCAAGCTGACAAACACAAAATACCCCGGATCTG...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | GAGCTCAGGCCCTGGATCTCCGTAATCACACCACAATTCCAGCTCCAGGGGGATAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ELRPWISVITPQFQLQGDSSLLQ*SPLAVP Trigger: GGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACT...ATCCCCCTGGAGCTGGAATTGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACAAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLQRTRAQALDLRNHTTSSLLQ*SPLAVP Trigger: GGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACT...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | TGTGAGCCCCAGCACTGGCTTTCAGAGTTGAATGTTCTGTCAGCAGTCAGGACAGCTAATGCGCTGGACTaGGACGAGACTATGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CEPQHWLSELNVLSAVRTANALD*DETMVS Trigger: AGACACCATAGTCTCGTCCAAGTCCAGCGCATTAGC...TGTCCTGACTGCTGACAGAACATTCAACTCTGAAAGCCAGTGCTGGGGCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | AGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATGTTCCCTCTTCTTaGTGCCAAGTCTGCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RYLRSLLQRTRAQALDLRNVPSS*CQVCQD Trigger: GTCCTGGCAGACTTGGCACAAAGAAGAGGGAACATT...ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAAAGCCACTTCTCTGGTaGAGTAGAGCACTCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEKPCTSTPEGCPVWILSKPLLW*SRALWS Trigger: AGACCAGAGTGCTCTACTCAACCAGAGAAGTGGCTT...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGAAGCCACTTCTCTGGTaGAGTAGAGCACTCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVKPLLW*SRALWS Trigger: AGACCAGAGTGCTCTACTCAACCAGAGAAGTGGCTT...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS TCA 90 bp | TCCAACACCCTCAAGCAGCGCTCGACCTCCAGAGTGAAGTCTACGTaGCCTGGAGTATCAATCAGATTGACTCTATACCCTTTCCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SNTLKQRSTSRVKST*PGVSIRLTLYPFQS Trigger: CGACTGGAAAGGGTATAGAGTCAATCTGATTGATACTCCAGGTCACGTAGACTTCACTCTGGAGGTCGAGCGCTGCTTGAGGGTGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS CCA 90 bp | CACCCTCAAGCAGCGCTCGACCTCCAGAGTGAAGTCTACGTGACCTaGAGTATCAATCAGATTGACTCTATACCCTTTCCAGTCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HPQAALDLQSEVYVT*SINQIDSIPFPVES Trigger: ACTCTCGACTGGAAAGGGTATAGAGTCAATCTGATTGATACTCCAGGTCACGTAGACTTCACTCTGGAGGTCGAGCGCTGCTTGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGTAAAATCAGGGGCTTaGCCTTTAACTTCTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRLRYLRSLLQRTRAQALVKSGA*PLTSPG Trigger: TCCGGGAGAAGTTAAAGGCAAAGCCCCTGATTTTAC...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | CTAGGACTCACTCCCCTTGTCCTACAGGACCTGGAGCAGCTCTTTTGCTCCTTAGTAAAATCAGGGGCTTaGCCTTTAACTTCTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGLTPLVLQDLEQLFCSLVKSGA*PLTSPG Trigger: TCCGGGAGAAGTTAAAGGCAAAGCCCCTGATTTTAC...TAAGGAGCAAAAGAGCTGCTCCAGGTCCTGTAGGACAAGGGGAGTGAGTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATTCTGGCTTCACCAATaGGCAGCTGTAAAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KEKPCTSTPEGCPVWILSFWLHQ*AAVKSG Trigger: CCCTGATTTTACAGCTGCCAATTGGTGAAGCCAGAA...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | TATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCAGGGGTCCTCGCTGTTaGTCATGTAGTACTTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YFIPAPEMAEITGAQLWCRGPRC*SCSTLN Trigger: GTTTAAAGTACTACATGACAAACAGCGAGGACCCCT...GCACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCAATGTTCCCTCTTCTTaGTGCCAAGTCTGCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ETTSPIPESRTYLCCARFNVPSS*CQVCQD Trigger: GTCCTGGCAGACTTGGCACAAAGAAGAGGGAACATT...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | GAGACCACTTCTCCTATTCCAGAGAGCAGGACTTACCTCTGCTGTGCTAGGTTCCGGGGTATTTTGTGTTaGTCAGCTTGCCTCCATACA | + |
|
Preference number: 5 (lower is better) Translates to: ETTSPIPESRTYLCCARFRGILC*SACLHT Trigger: TGTATGGAGGCAAGCTGACAAACACAAAATACCCCG...GAACCTAGCACAGCAGAGGTAAGTCCTGCTCTCTGGAATAGGAGAAGTGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCCAGTCTTGTCCATCTaGTTTAAAAAGCAGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVPVLSI*FKKQIR Trigger: CCGGATCTGCTTTTTAAACAAGATGGACAAGACTGG...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCAGCATTCCACAGCCAGGGGATTGGTACTCAAGTGGTGGCTGCCTTGTTTTCTGGCTTCACCAATaGGCAGCTGTAAAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSIPQPGDWYSSGGCLVFWLHQ*AAVKSG Trigger: CCCTGATTTTACAGCTGCCAATTGGTGAAGCCAGAA...AACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTGGAATGCTGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | TCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTAATCACACCACACAAAGGAGTTTTTCTTaGTTTACGACATCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLLQRTRAQALDLRNHTTQRSFS*FTTSTT Trigger: AGTGGTGGATGTCGTAAACAAAGAAAAACTCCTTTG...TGTGGTGTGATTACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRLRYLRSLLQRTRAQALSSLLQ*SPLAVP Trigger: GGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACT...CAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AAGAAGGCTGAGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTCCAGTCTTGTCCATCTaGTTTAAAAAGCAGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KKAEVFKITLAEDPSSGPPVLSI*FKKQIR Trigger: CCGGATCTGCTTTTTAAACAAGATGGACAAGACTGG...AGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCTCAGCCTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCAGCATTCCACAGCCAGGGGATTGGTACTCAAGTGGTGGCTGCCTTGTTAGGGGTCCTCGCTGTTaGTCATGTAGTACTTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISSIPQPGDWYSSGGCLVRGPRC*SCSTLN Trigger: GTTTAAAGTACTACATGACAAACAGCGAGGACCCCT...AACAAGGCAGCCACCACTTGAGTACCAATCCCCTGGCTGTGGAATGCTGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAAGGGATTTCTACATGTaGGTCAGCAAATGGCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEKPCTSTPEGCPVWILSRDFYM*VSKWQK Trigger: CTTTTGCCATTTGCTGACCAACATGTAGAAATCCCT...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCATAGGGATTTCTACATGTaGGTCAGCAAATGGCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKSLALALQRAALCGYCHRDFYM*VSKWQK Trigger: CTTTTGCCATTTGCTGACCAACATGTAGAAATCCCT...ATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS TCA 90 bp | AATCAGATTGACTCTATACCCTTTCCAGTCGAGAGTCACAGCTGCTaGCTGGATGGTAATGCCCCTTTCTCGCTCTTGAGCCATGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: NQIDSIPFPVESHSC*LDGNAPFSLLSHEI Trigger: GATTTCATGGCTCAAGAGCGAGAAAGGGGCATTACCATCCAGTCAGCAGCTGTGACTCTCGACTGGAAAGGGTATAGAGTCAATCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS CCA 90 bp | ACAGGACAGTTTGTCCAGAGTCAGGATCGAGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGCGTTCCAAGGCATGATCTAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGQFVQSQDRVSLSN*DLRAEGVPRHDLNL Trigger: CAGATTTAGATCATGCCTTGGAACGCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAACTCGATCCTGACTCTGGACAAACTGTCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | AAGCTGGCTGCAAACTGGTTTTCTAGGGCTCAGAGTTCATTCACACTGTTCCTATCTGTGGTGGTGGTTTaGCCTGCATCAATATGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLAANWFSRAQSSFTLFLSVVVV*PASICA Trigger: GGCACATATTGATGCAGGCAAAACCACCACCACAGA...TAGGAACAGTGTGAATGAACTCTGAGCCCTAGAAAACCAGTTTGCAGCCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | CCAGGTTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGAAACTTGCTCCAGTCTaGTCCATCTTGTTTAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGYFIPAPEMAEITGAQLKLAPV*SILFKK Trigger: CTTTTTAAACAAGATGGACAAGACTGGAGCAAGTTT...CAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAACCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCAAAGGAGTTTTTCTTaGTTTACGACATCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVQRSFS*FTTSTT Trigger: AGTGGTGGATGTCGTAAACAAAGAAAAACTCCTTTG...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCACAAAGGAGTTTTTCTTaGTTTACGACATCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: KEKPCTSTPEGCPVWILSQRSFS*FTTSTT Trigger: AGTGGTGGATGTCGTAAACAAAGAAAAACTCCTTTG...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTCCACACAGGACAGTTaGTCCAGAGTCAGGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSSTQDS*SRVRIE Trigger: CTCGATCCTGACTCTGGACAAACTGTCCTGTGTGGA...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCTCAGCATACTCGATCTaGGCCACAGCACAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NISKVKQEMSKRGPLLTGSAYSI*ATAQGS Trigger: AGAGCCCTGTGCTGTGGCCAAGATCGAGTATGCTGA...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS GCA 90 bp | CACAGGAGGGTTAATGACGGAATGAAGAGACTTGACATCACTTCCTaGTGGTGCAGAACTGTAGTTTCTTGTAAGAGGCAGCTGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRRVNDGMKRLDITS*WCRTVVSCKRQLSL Trigger: AAGACTCAGCTGCCTCTTACAAGAAACTACAGTTCTGCACCAGCAGGAAGTGATGTCAAGTCTCTTCATTCCGTCATTAACCCTCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022170.8 |
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| CDS CCA 90 bp | GTCAAAGCAATGTTTCCAGCAGTCAGGGAAGGGATTTCTACATGTTaGTCAGCAAATGGCAAAAGCAGACGACTCATTCTTTCCGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VKAMFPAVREGISTC*SANGKSRRLILSVQ Trigger: CTGCACGGAAAGAATGAGTCGTCTGCTTTTGCCATTTGCTGACCAACATGTAGAAATCCCTTCCCTGACTGCTGGAAACATTGCTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTCAGATCCGGGGTATTTaGTGTTTGTCAGCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSQIRGI*CLSACL Trigger: GAGGCAAGCTGACAAACACAAAATACCCCGGATCTG...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAAAGCCTTGCACTAGCACTCCAGAGGGCTGCCCTGTGTGGATACTGTCAAAACTTGCTCCAGTCTaGTCCATCTTGTTTAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEKPCTSTPEGCPVWILSKLAPV*SILFKK Trigger: CTTTTTAAACAAGATGGACAAGACTGGAGCAAGTTT...TGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTAGTGCAAGGCTTTTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | TGCGTTGCTACCCAGCTTTGCTTGGTTCTTCTATACCAGTGGTTCTCAACCTGTAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CVATQLCLVLLYQWFSTCSSLLQ*SPLAVP Trigger: GGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACT...ACAGGTTGAGAACCACTGGTATAGAAGAACCAAGCAAAGCTGGGTAGCAACGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTTATCCCAGCACCAGAGATGGCAGAGATAACCGGGGCCCAGCTGTGGTGCAATTAAGGAGTTCCTaGCTTCAATTGTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LFYPSTRDGRDNRGPAVVQLRSS*LQLSPL Trigger: TAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTG...CACCACAGCTGGGCCCCGGTTATCTCTGCCATCTCTGGTGCTGGGATAAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AGGTATTTAAGATCACTCTTGCAGAGGACCCGAGCTCAGGCCCTGGATCTCCGTCAATTAAGGAGTTCCTaGCTTCAATTGTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RYLRSLLQRTRAQALDLRQLRSS*LQLSPL Trigger: TAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTG...ACGGAGATCCAGGGCCTGAGCTCGGGTCCTCTGCAAGAGTGATCTTAAATACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCTCCACACAGGACAGTTaGTCCAGAGTCAGGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWNISKVKQEMSKRGPLLSTQDS*SRVRIE Trigger: CTCGATCCTGACTCTGGACAAACTGTCCTGTGTGGA...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTAATGTTCCCTCTTCTTaGTGCCAAGTCTGCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSNVPSS*CQVCQD Trigger: GTCCTGGCAGACTTGGCACAAAGAAGAGGGAACATT...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAAAAGCCACTTCTCTGGTaGAGTAGAGCACTCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKKPLLW*SRALWS Trigger: AGACCAGAGTGCTCTACTCAACCAGAGAAGTGGCTT...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS CCA 90 bp | ATATTCTTACTTGTCCAGAGTCAGGATCGAGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGCGTTCCAAGGCATGATCTAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: IFLLVQSQDRVSLSN*DLRAEGVPRHDLNL Trigger: CAGATTTAGATCATGCCTTGGAACGCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAACTCGATCCTGACTCTGGACAAGTAAGAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161913.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTACACCCAACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTCCAGTCTTGTCCATCTaGTTTAAAAAGCAGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSTPNRIRMAAPRVLSSSPVLSI*FKKQIR Trigger: CCGGATCTGCTTTTTAAACAAGATGGACAAGACTGG...AGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTTGGGTGTACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCGTAAAATCAGGGGCTTaGCCTTTAACTTCTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: NISKVKQEMSKRGPLLTGVKSGA*PLTSPG Trigger: TCCGGGAGAAGTTAAAGGCAAAGCCCCTGATTTTAC...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAATTCTGGCTTCACCAATaGGCAGCTGTAAAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKFWLHQ*AAVKSG Trigger: CCCTGATTTTACAGCTGCCAATTGGTGAAGCCAGAA...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | TGCGTTGCTACCCAGCTTTGCTTGGTTCTTCTATACCAGTGGTTCTCAACCTGTCAAAGGAGTTTTTCTTaGTTTACGACATCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: CVATQLCLVLLYQWFSTCQRSFS*FTTSTT Trigger: AGTGGTGGATGTCGTAAACAAAGAAAAACTCCTTTG...ACAGGTTGAGAACCACTGGTATAGAAGAACCAAGCAAAGCTGGGTAGCAACGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAACCTAGAACAACTCTGTaGTCTTGGCGAGTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKPRTTL*SWRVWI Trigger: AATCCAGACTCGCCAAGACAACAGAGTTGTTCTAGG...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAGGTGACAGTTTCCTTTCTTCCAAGAAACCTTTGGAAACCCAAGAGATTCCTAGAACAACTCTGTaGTCTTGGCGAGTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RLGDSFLSSKKPLETQEIPRTTL*SWRVWI Trigger: AATCCAGACTCGCCAAGACAACAGAGTTGTTCTAGG...AATCTCTTGGGTTTCCAAAGGTTTCTTGGAAGAAAGGAAACTGTCACCTAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
||
| CDS CCA 90 bp | GTTTCCAGCAGTCAGGGAAGGGATTTCTACATGTTGGTCAGCAAATaGCAAAAGCAGACGACTCATTCTTTCCGTGCAGTTTCTATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSSSQGRDFYMLVSK*QKQTTHSFRAVSIN Trigger: ATTAATAGAAACTGCACGGAAAGAATGAGTCGTCTGCTTTTGCCATTTGCTGACCAACATGTAGAAATCCCTTCCCTGACTGCTGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
||
| CDS-3UTR CAA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCAGGGGTCCTCGCTGTTaGTCATGTAGTACTTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GWNISKVKQEMSKRGPLLRGPRC*SCSTLN Trigger: GTTTAAAGTACTACATGACAAACAGCGAGGACCCCT...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | GGATGGAACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCGGAGTATCAATCAGATaGACTCTATACCCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GWNISKVKQEMSKRGPLLGVSIR*TLYPFQ Trigger: CTGGAAAGGGTATAGAGTCAATCTGATTGATACTCC...GAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTTCCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
||
| CDS-3UTR CAA 90 bp | CCACTAAAGGAGGCAGCGCTGTACCCTGTTCTCTTTATAATGCTGAGCATTTTGAAACTTGCTCCAGTCTaGTCCATCTTGTTTAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLKEAALYPVLFIMLSILKLAPV*SILFKK Trigger: CTTTTTAAACAAGATGGACAAGACTGGAGCAAGTTT...CAAAATGCTCAGCATTATAAAGAGAACAGGGTACAGCGCTGCCTCCTTTAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | AACAGAATTAGAATGGCAGCTCCAAGGGTCTTGTCAAGTTCTTTCCACACCAAAAGGGATTTCTACATGTaGGTCAGCAAATGGCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NRIRMAAPRVLSSSFHTKRDFYM*VSKWQK Trigger: CTTTTGCCATTTGCTGACCAACATGTAGAAATCCCT...TTTGGTGTGGAAAGAACTTGACAAGACCCTTGGAGCTGCCATTCTAATTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | AGGCTAGGTGACAGTTTCCTTTCTTCCAAGAAACCTTTGGAAACCCAAGAGATTAGGGATTTCTACATGTaGGTCAGCAAATGGCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGDSFLSSKKPLETQEIRDFYM*VSKWQK Trigger: CTTTTGCCATTTGCTGACCAACATGTAGAAATCCCT...AATCTCTTGGGTTTCCAAAGGTTTCTTGGAAGAAAGGAAACTGTCACCTAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS-3UTR CAA 90 bp | AACATCTCAAAAGTAAAACAAGAAATGTCTAAACGAGGTCCGCTCCTCACAGGCCAATTAAGGAGTTCCTaGCTTCAATTGTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: NISKVKQEMSKRGPLLTGQLRSS*LQLSPL Trigger: TAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTG...GCCTGTGAGGAGCGGACCTCGTTTAGACATTTCTTGTTTTACTTTTGAGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 |
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| CDS-3UTR CAA 90 bp | GGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAGAATCCTTTCAATTAAGGAGTTCCTaGCTTCAATTGTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GFMKRKGFGSDFRRLESFQLRSS*LQLSPL Trigger: TAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTG...AAAGGATTCTAGTCTTCTAAAATCGCTGCCAAAGCCCTTTCTCTTCATGAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161825.8 |
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| CDS CCA 72 bp | GGGGATCCGAGCAGAGGTCCCTGGAGGCATGCACTGTaGACGGCACTTTCAATGGCCTCCCGAGAGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GDPSRGPWRHAL*TALSMASREAC Trigger: GCAGGCCTCTCGGGAGGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCGGATCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS GCA 72 bp | CTGGACTGGGGATCCGAGCAGAGGTCCCTGGAGGCATaGACTGTGGACGGCACTTTCAATGGCCTCCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LDWGSEQRSLEA*TVDGTFNGLPR Trigger: TCTCGGGAGGCCATTGAAAGTGCCGTCCACAGTGCATGCCTCCAGGGACCTCTGCTCGGATCCCCAGTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CAA 90 bp | GAGGCCTGCAGCAGGTCTTCACCCACACAGTCAGCATACTCGATCTaGGCCACAGCACAGGGCTCTTCTGCTGGCCGGACTTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EACSRSSPTQSAYSI*ATAQGSSAGRTSSS Trigger: GGAGCTGGAAGTCCGGCCAGCAGAAGAGCCCTGTGCTGTGGCCAAGATCGAGTATGCTGACTGTGTGGGTGAAGACCTGCTGCAGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CCA 72 bp | ATACTCGATCTTGGCCACAGCACAGGGCTCTTCTGCTaGCCGGACTTCCAGCTCCGCACTCACCAAGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ILDLGHSTGLFC*PDFQLRTHQVP Trigger: CGGCACTTGGTGAGTGCGGAGCTGGAAGTCCGGCCAGCAGAAGAGCCCTGTGCTGTGGCCAAGATCGAGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS GCA 72 bp | AGCATACTCGATCTTGGCCACAGCACAGGGCTCTTCTaGTGGCCGGACTTCCAGCTCCGCACTCACCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SILDLGHSTGLF*WPDFQLRTHQV Trigger: CACTTGGTGAGTGCGGAGCTGGAAGTCCGGCCAGCAGAAGAGCCCTGTGCTGTGGCCAAGATCGAGTATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CCA 72 bp | GTCCGGCTCTGCGAGCTGCAGCTAATGCGCTGGACTTaGACGAGACTATGGTGTCTCCAGTGGCAGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VRLCELQLMRWT*TRLWCLQWQFV Trigger: AACAAACTGCCACTGGAGACACCATAGTCTCGTCCAAGTCCAGCGCATTAGCTGCAGCTCGCAGAGCCGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS CAA 72 bp | AGGTGCCAGGGTGAATCATCAGTGAGTGCAACGTCATaGCCACATCCTGGACTGGGGATCCGAGCAGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RCQGESSVSATS*PHPGLGIRAEV Trigger: GACCTCTGCTCGGATCCCCAGTCCAGGATGTGGCAATGACGTTGCACTCACTGATGATTCACCCTGGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CCA 72 bp | GCCGCTTGTCTCCAAGCACCCTATCGAGGGTGTCTGTaGCGCGAACTGAGTTTAAGATGGTTTCCCGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: AACLQAPYRGCL*RELSLRWFPGM Trigger: CATACCGGGAAACCATCTTAAACTCAGTTCGCGCCACAGACACCCTCGATAGGGTGCTTGGAGACAAGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS TCA 72 bp | GACCATAGTTGTGGAGGTGCCAGGGTGAATCATCAGTaGGTGCAACGTCATTGCCACATCCTGGACTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: DHSCGGARVNHQ*VQRHCHILDWG Trigger: TCCCCAGTCCAGGATGTGGCAATGACGTTGCACTCACTGATGATTCACCCTGGCACCTCCACAACTATGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS GCA 72 bp | GCGAGTCTGGATTTCCTGAATGTTCCCTCTTCTTTGTaGCAAGTCTGCCAGGACAGGGCTGAGGTACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLDFLNVPSSL*QVCQDRAEVLP Trigger: AGGGAGTACCTCAGCCCTGTCCTGGCAGACTTGGCACAAAGAAGAGGGAACATTCAGGAAATCCAGACTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CCA 72 bp | TATCGAGGGTGTCTGTGGCGCGAACTGAGTTTAAGATaGTTTCCCGGTATGCCACCTGCAGAGGCCCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: YRGCLWRELSLR*FPGMPPAEALD Trigger: ATCTAGGGCCTCTGCAGGTGGCATACCGGGAAACCATCTTAAACTCAGTTCGCGCCACAGACACCCTCGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CAA 90 bp | CTGCTCACTGTGACCTCGAGACTCATCAGAGGTTCCAGCACCTGTTaGTCAGCTTTCTTCAGGGCCTTCTGCATACACCGTGAGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLTVTSRLIRGSSTC*SAFFRAFCIHREMQ Trigger: CTGCATCTCACGGTGTATGCAGAAGGCCCTGAAGAAAGCTGACAAACAGGTGCTGGAACCTCTGATGAGTCTCGAGGTCACAGTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS TCA 72 bp | GGGGTATTTTGTGTTTGTCAGCTTGCCTCCATACAGTaGGAGTCTGGGCCTCTACACCAGCAGAGGCGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GVFCVCQLASIQ*ESGPLHQQRRQ Trigger: TTGACGCCTCTGCTGGTGTAGAGGCCCAGACTCTCACTGTATGGAGGCAAGCTGACAAACACAAAATACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS TCA 72 bp | ATGCAGGCAGTGACCATAGTTGTGGAGGTGCCAGGGTaGATCATCAGTGAGTGCAACGTCATTGCCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: MQAVTIVVEVPG*IISECNVIATS Trigger: GGATGTGGCAATGACGTTGCACTCACTGATGATTCACCCTGGCACCTCCACAACTATGGTCACTGCCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CAA 72 bp | GTGACCTCGAGACTCATCAGAGGTTCCAGCACCTGTTaGTCAGCTTTCTTCAGGGCCTTCTGCATACACCGT | + |
|
Preference number: 6 (lower is better) Translates to: VTSRLIRGSSTC*SAFFRAFCIHR Trigger: ACGGTGTATGCAGAAGGCCCTGAAGAAAGCTGACAAACAGGTGCTGGAACCTCTGATGAGTCTCGAGGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS TCA 72 bp | GGGGTATTTTGTGTTTGTCAGCTTGCCTCCATACAGTaGGAGTCTGGGCCTTTACCTCTACACCAGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVFCVCQLASIQ*ESGPLPLHQQR Trigger: CCTCTGCTGGTGTAGAGGTAAAGGCCCAGACTCTCACTGTATGGAGGCAAGCTGACAAACACAAAATACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160139.8 |
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| CDS GCA 72 bp | TCCAGCACCTGTTTGTCAGCTTTCTTCAGGGCCTTCTaGATACACCGTGAGATGCAGGCAGTGACCATAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSTCLSAFFRAF*IHREMQAVTIV Trigger: AACTATGGTCACTGCCTGCATCTCACGGTGTATGCAGAAGGCCCTGAAGAAAGCTGACAAACAGGTGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS TCA 72 bp | CTCAAGCAGCGCTCGACCTCCAGAGTGAAGTCTACGTaGCCTGGAGTATCAATCAGATTGACTCTATACCCT | + |
|
Preference number: 6 (lower is better) Translates to: LKQRSTSRVKST*PGVSIRLTLYP Trigger: AGGGTATAGAGTCAATCTGATTGATACTCCAGGTCACGTAGACTTCACTCTGGAGGTCGAGCGCTGCTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS CCA 72 bp | GCAGCGCTCGACCTCCAGAGTGAAGTCTACGTGACCTaGAGTATCAATCAGATTGACTCTATACCCTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AALDLQSEVYVT*SINQIDSIPFP Trigger: TGGAAAGGGTATAGAGTCAATCTGATTGATACTCCAGGTCACGTAGACTTCACTCTGGAGGTCGAGCGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS CCA 72 bp | CTTGTCCAGAGTCAGGATCGAGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGCGTTCCAAGGCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LVQSQDRVSLSN*DLRAEGVPRHD Trigger: ATCATGCCTTGGAACGCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAACTCGATCCTGACTCTGGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161913.8 |
||
| CDS CCA 72 bp | TTTGTCCAGAGTCAGGATCGAGTTTCACTTTCAAACTaGGATCTTCGCGCTGAAGGCGTTCCAAGGCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: FVQSQDRVSLSN*DLRAEGVPRHD Trigger: ATCATGCCTTGGAACGCCTTCAGCGCGAAGATCCCAGTTTGAAAGTGAAACTCGATCCTGACTCTGGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 |
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| CDS CAA 90 bp | GTACTGCAGCCTGTAATTGTTCAATTAAGGAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCCGATCACTCGCTTCTGAGAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLQPVIVQLRSSLLQ*SPLAVPDHSLLRGA Trigger: TGCCCCTCTCAGAAGCGAGTGATCGGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTGAACAATTACAGGCTGCAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042084.13 |
||
| CDS GCA 72 bp | GACGGAATGAAGAGACTTGACATCACTTCCTGCTGGTaGAGAACTGTAGTTTCTTGTAAGAGGCAGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DGMKRLDITSCW*RTVVSCKRQLS Trigger: ACTCAGCTGCCTCTTACAAGAAACTACAGTTCTGCACCAGCAGGAAGTGATGTCAAGTCTCTTCATTCCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022170.8 |
||
| CDS CCA 72 bp | GGAATGAAGAGACTTGACATCACTTCCTGCTATGCCTaGTGCAGAACTGTAGTTTCTTGTAAGAGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GMKRLDITSCYA*CRTVVSCKRQL Trigger: CAGCTGCCTCTTACAAGAAACTACAGTTCTGCACCAGGCATAGCAGGAAGTGATGTCAAGTCTCTTCATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 ENSMUST00000161929.8 |
||
| CDS CAA 90 bp | TGTCAAAGCAATGTTTCCAGCAGTCAGGGAAGGGATTTCTACATGTaGGTCAGCAAATGGCAAAAGCAGACGACTCATTCTTTCCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQSNVSSSQGRDFYM*VSKWQKQTTHSFRA Trigger: TGCACGGAAAGAATGAGTCGTCTGCTTTTGCCATTTGCTGACCAACATGTAGAAATCCCTTCCCTGACTGCTGGAAACATTGCTTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS CAA 90 bp | TCACCCTGTGTACTGCAGCCTGTAATTGTTCAATTAAGGAGTTCCTaGCTTCAATTGTCTCCTTTAGCAGTTCCCGATCACTCGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SPCVLQPVIVQLRSS*LQLSPLAVPDHSLL Trigger: CAGAAGCGAGTGATCGGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTGAACAATTACAGGCTGCAGTACACAGGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042084.13 |
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| CDS GCA 72 bp | ATGAAGAGACTTGACATCACTTCCTGCTATGCCTGGTaGAGAACTGTAGTTTCTTGTAAGAGGCAGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: MKRLDITSCYAW*RTVVSCKRQLS Trigger: ACTCAGCTGCCTCTTACAAGAAACTACAGTTCTGCACCAGGCATAGCAGGAAGTGATGTCAAGTCTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 ENSMUST00000161929.8 |
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| CDS CCA 72 bp | AATGACGGAATGAAGAGACTTGACATCACTTCCTGCTaGTGCAGAACTGTAGTTTCTTGTAAGAGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: NDGMKRLDITSC*CRTVVSCKRQL Trigger: CAGCTGCCTCTTACAAGAAACTACAGTTCTGCACCAGCAGGAAGTGATGTCAAGTCTCTTCATTCCGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022170.8 |
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| CDS TCA 72 bp | ATCCGTCACTGTGTCTCCATCATCGACATCTCCCAATaGTCTTGTGTATCCAGAATAGTACAGGATTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: IRHCVSIIDISQ*SCVSRIVQDSL Trigger: GAGAGAATCCTGTACTATTCTGGATACACAAGATCATTGGGAGATGTCGATGATGGAGACACAGTGACGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS GCA 72 bp | GTTAATGACGGAATGAAGAGACTTGACATCACTTCCTaGTGGTGCAGAACTGTAGTTTCTTGTAAGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VNDGMKRLDITS*WCRTVVSCKRQ Trigger: CTGCCTCTTACAAGAAACTACAGTTCTGCACCAGCAGGAAGTGATGTCAAGTCTCTTCATTCCGTCATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022170.8 |
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| CDS CAA 72 bp | TCACTGTGTCTCCATCATCGACATCTCCCAATGATCTaGTGTATCCAGAATAGTACAGGATTCTCTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SLCLHHRHLPMI*CIQNSTGFSLW Trigger: CCACAGAGAGAATCCTGTACTATTCTGGATACACAAGATCATTGGGAGATGTCGATGATGGAGACACAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022170.8 ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 |
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| CDS GCA 72 bp | GTTAATGACGGAATGAAGAGACTTGACATCACTTCCTaGTATGCCTGGTGCAGAACTGTAGTTTCTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: VNDGMKRLDITS*YAWCRTVVSCK Trigger: CTTACAAGAAACTACAGTTCTGCACCAGGCATAGCAGGAAGTGATGTCAAGTCTCTTCATTCCGTCATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042084.13 ENSMUST00000160139.8 ENSMUST00000161639.8 ENSMUST00000161825.8 ENSMUST00000161913.8 ENSMUST00000161929.8 |
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| CDS CAA 72 bp | CCTGTAATTGTTCAATTAAGGAGTTCCTTGCTTCAATaGTCTCCTTTAGCAGTTCCCGATCACTCGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVIVQLRSSLLQ*SPLAVPDHSLL Trigger: CAGAAGCGAGTGATCGGGAACTGCTAAAGGAGACAATTGAAGCAAGGAACTCCTTAATTGAACAATTACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042084.13 |
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