Pregenerated sensors for GFM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027774Ensembl transcript IDs: ENSMUST00000077271.9
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACCTGTAATCCCAGTCTGGGGAAACAGAGGCAGGGGGAATCCCTaGATGTTCTGCTCAGCAACACAAGCTTCAGGCTTAGTGAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: TPVIPVWGNRGRGNP*MFCSATQASGLVRD Trigger: GTCTCTCACTAAGCCTGAAGCTTGTGTTGCTGAGCAGAACATCCAGGGATTCCCCCTGCCTCTGTTTCCCCAGACTGGGATTACAGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR TCA 90 bp | TCGGGTGTTGTGTGCCCAGAATCCTACCTCTTGATGAGAGGACTGTaGGTTTTGAGGCCAACAGGGGCTATATACACACAGCCCTTATGT | + |
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Preference number: 1 (lower is better) Translates to: SGVVCPESYLLMRGL*VLRPTGAIYTQPLC Trigger: ACATAAGGGCTGTGTGTATATAGCCCCTGTTGGCCTCAAAACTCACAGTCCTCTCATCAAGAGGTAGGATTCTGGGCACACAACACCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR GCA 90 bp | TCTGGCATGTACATTCACACACTAAACCACAGACGTACATACATGTaGACGGTGTCGGGTGTTGTGTGCCCAGAATCCTACCTCTTGATG | + |
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Preference number: 1 (lower is better) Translates to: SGMYIHTLNHRRTYM*TVSGVVCPESYLLM Trigger: CATCAAGAGGTAGGATTCTGGGCACACAACACCCGACACCGTGCACATGTATGTACGTCTGTGGTTTAGTGTGTGAATGTACATGCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR GCA 90 bp | GCCTATGTGCAGGTGACACTGCAGTGGTCTTTAACATCAAATGCATaGTGGAATCAACTGGAAATGTTCCAGGGAGCCTGGATATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: AYVQVTLQWSLTSNA*WNQLEMFQGAWISG Trigger: TCCAGATATCCAGGCTCCCTGGAACATTTCCAGTTGATTCCAGCATGCATTTGATGTTAAAGACCACTGCAGTGTCACCTGCACATAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR CCA 90 bp | TATGTGCAGGTGACACTGCAGTGGTCTTTAACATCAAATGCATGCTaGAATCAACTGGAAATGTTCCAGGGAGCCTGGATATCTGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: YVQVTLQWSLTSNAC*NQLEMFQGAWISGD Trigger: ATCTCCAGATATCCAGGCTCCCTGGAACATTTCCAGTTGATTCCAGCATGCATTTGATGTTAAAGACCACTGCAGTGTCACCTGCACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAAATGTTCCAGGGAGCCTGGATATCTGGAGATGGAACTGGGGTCCTCACCTGTAATCCCAGTCTaGGGAAACAGAGGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: NWKCSREPGYLEMELGSSPVIPV*GNRGRG Trigger: CCCCCTGCCTCTGTTTCCCCAGACTGGGATTACAGG...TGAGGACCCCAGTTCCATCTCCAGATATCCAGGCTCCCTGGAACATTTCCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGCCACAGATGTGGGCTCTGTTCCTGGAACTGTTCCTATGGGATCCTGTTCTACCACTCCCCAGGCTTaGTGCTCTGGTATAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: LATDVGSVPGTVPMGSCSTTPQA*CSGIAT Trigger: TGTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGT...AGAACAGGATCCCATAGGAACAGTTCCAGGAACAGAGCCCACATCTGTGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGGGCCTATGTGCAGGTGACACTGCAGTGGTCTTTAACATCAAATGCATGGCATGCATGAGGACCTaGGTTCAAGCCCCCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: VLGLCAGDTAVVFNIKCMACMRT*VQAPRN Trigger: GTTCCTGGGGGCTTGAACTCAGGTCCTCATGCATGC...CATGCATTTGATGTTAAAGACCACTGCAGTGTCACCTGCACATAGGCCCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR TCA 90 bp | CCTAAAGCACACCACTCCCCAGGCTTGATGCTCTGGTATAGCCACAGATGTTCATTGATGAGAGGACTGTaGGTTTTGAGGCCAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: PKAHHSPGLMLWYSHRCSLMRGL*VLRPTG Trigger: CCCTGTTGGCCTCAAAACTCACAGTCCTCTCATCAA...TGAACATCTGTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGTGTGCTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR TCA 90 bp | GACACTGCAGTGGTCTTTAACATCAAATGCATGCTGGAATCAACTGGAAATGTTCCCCCAGGAACCATGTaGAAACAGCTGGGCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: DTAVVFNIKCMLESTGNVPPGTM*KQLGLD Trigger: GTCCAGGCCCAGCTGTTTTCACATGGTTCCTGGGGG...AACATTTCCAGTTGATTCCAGCATGCATTTGATGTTAAAGACCACTGCAGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTCAGGAGAGTGCAGCCAGCCACACAGCAGTCACTAGCGAGGCCTCTAGTGAGCTACTGAATAATTaGAACCACAGTATCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: VSQESAASHTAVTSEASSELLNN*NHSIYL Trigger: CAAATAGATACTGTGGTTCCAATTATTCAGTAGCTC...ACTAGAGGCCTCGCTAGTGACTGCTGTGTGGCTGGCTGCACTCTCCTGACTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR TCA 90 bp | AACTGGAAATGTTCCAGGGAGCCTGGATATCTGGAGATGGAACTGGGGTCCTCAAGACTGTTTCCTTACTaGGAATATACTCATAGTACC | + |
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Preference number: 2 (lower is better) Translates to: NWKCSREPGYLEMELGSSRLFPY*EYTHST Trigger: GGTACTATGAGTATATTCTCAGTAAGGAAACAGTCT...TGAGGACCCCAGTTCCATCTCCAGATATCCAGGCTCCCTGGAACATTTCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR CCA 90 bp | GATGTTCATAAGGACAGGGAGCTACTGAATAATTGGAACCACAGTATCTATTTGACAAAAGACAACCTCTaGCATGTACATTCACACACT | + |
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Preference number: 2 (lower is better) Translates to: DVHKDRELLNNWNHSIYLTKDNL*HVHSHT Trigger: AGTGTGTGAATGTACATGCCAGAGGTTGTCTTTTGT...CAAATAGATACTGTGGTTCCAATTATTCAGTAGCTCCCTGTCCTTATGAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR CCA 90 bp | GACACTGCAGTGGTCTTTAACATCAAATGCATGCTGGAATCAACTGGAAATGTTACCACAGTATCTATTTaGAAACTTAATGCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: DTAVVFNIKCMLESTGNVTTVSI*KLNACT Trigger: TGTGCAGGCATTAAGTTTCCAAATAGATACTGTGGT...AACATTTCCAGTTGATTCCAGCATGCATTTGATGTTAAAGACCACTGCAGTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGCCACAGATGTGGGCTCTGTTCCTGGAACTGTTCCTATGGGATCCTGTTCTCACCACTCCCCAGGCTaGATGCTCTGGTATAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LATDVGSVPGTVPMGSCSHHSPG*MLWYSH Trigger: GTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGTG...AGAACAGGATCCCATAGGAACAGTTCCAGGAACAGAGCCCACATCTGTGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR GCA 72 bp | TGGGGAAACAGAGGCAGGGGGAATCCCTGGATGTTCTaGTCAGCAACACAAGCTTCAGGCTTAGTGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: WGNRGRGNPWMF*SATQASGLVRD Trigger: GTCTCTCACTAAGCCTGAAGCTTGTGTTGCTGAGCAGAACATCCAGGGATTCCCCCTGCCTCTGTTTCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR CCA 72 bp | ATCCCAGTCTGGGGAAACAGAGGCAGGGGGAATCCCTaGATGTTCTGCTCAGCAACACAAGCTTCAGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: IPVWGNRGRGNP*MFCSATQASGL Trigger: TAAGCCTGAAGCTTGTGTTGCTGAGCAGAACATCCAGGGATTCCCCCTGCCTCTGTTTCCCCAGACTGGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR TCA 72 bp | GTGTGCCCAGAATCCTACCTCTTGATGAGAGGACTGTaGGTTTTGAGGCCAACAGGGGCTATATACACACAG | + |
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Preference number: 3 (lower is better) Translates to: VCPESYLLMRGL*VLRPTGAIYTQ Trigger: CTGTGTGTATATAGCCCCTGTTGGCCTCAAAACTCACAGTCCTCTCATCAAGAGGTAGGATTCTGGGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR CCA 72 bp | GTTCCTATGGGATCCTGTTCTATCCACACTCCCATGTaGGCCCATGCCTTTGCATATGAAATGTCACTAATG | + |
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Preference number: 3 (lower is better) Translates to: VPMGSCSIHTPM*AHAFAYEMSLM Trigger: CATTAGTGACATTTCATATGCAAAGGCATGGGCCCACATGGGAGTGTGGATAGAACAGGATCCCATAGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR TCA 72 bp | TATCCACACTCCCATGTGGGCCCATGCCTTTGCATATaGAATGTCACTAATGGATTAGATACCCAGGATACG | + |
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Preference number: 3 (lower is better) Translates to: YPHSHVGPCLCI*NVTNGLDTQDT Trigger: CGTATCCTGGGTATCTAATCCATTAGTGACATTTCATATGCAAAGGCATGGGCCCACATGGGAGTGTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR TCA 72 bp | AAACGCAAATGTATTTCTTTAATTTCAGCTATCAGCTaGAGGGACAATAGCCCAAATGTAGTATCACACAAA | + |
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Preference number: 3 (lower is better) Translates to: KRKCISLISAIS*RDNSPNVVSHK Trigger: TTTGTGTGATACTACATTTGGGCTATTGTCCCTTCAGCTGATAGCTGAAATTAAAGAAATACATTTGCGTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | CAGGAGAGTGCAGCCAGCCACACAGCAGTCACTAGCGAGGCCTCTAGTGAGGCCGCTTCATCTGACGACTaGCTGTCATGGTCTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: QESAASHTAVTSEASSEAASSDD*LSWSGT Trigger: AGTGCCAGACCATGACAGTCAGTCGTCAGATGAAGC...GGCCTCACTAGAGGCCTCGCTAGTGACTGCTGTGTGGCTGGCTGCACTCTCCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | GATACCCAGGATACGTATTATAACTTAACTCCTCTCCCCGCCACCTCTCTCTCTATGAGCTCCTGCCGGTaGTCAGCGGCTGCGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: DTQDTYYNLTPLPATSLSMSSCR*SAAAAR Trigger: GCGGGCCGCAGCCGCTGACCACCGGCAGGAGCTCAT...AGAGAGAGAGGTGGCGGGGAGAGGAGTTAAGTTATAATACGTATCCTGGGTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | ATTCACACACTAAACCACAGACGTACATACATGTGCACGGTGTCGGGTGTTGTGTCAGCCTGCTTCCCCTaGCAGCCCAGGACTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IHTLNHRRTYMCTVSGVVSACFP*QPRTAG Trigger: CCCTGCAGTCCTGGGCTGGCAGGGGAAGCAGGCTGA...CACAACACCCGACACCGTGCACATGTATGTACGTCTGTGGTTTAGTGTGTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | CCTAAAGCACACCACTCCCCAGGCTTGATGCTCTGGTATAGCCACAGATGTTCAGTCATGGTCTGGCACTaGACTCCGCCAACCGCACAG | + |
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Preference number: 4 (lower is better) Translates to: PKAHHSPGLMLWYSHRCSVMVWH*TPPTAQ Trigger: CTGTGCGGTTGGCGGAGTCCAGTGCCAGACCATGAC...TGAACATCTGTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGTGTGCTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGAGTGCAGCCAGCCACACAGCAGTCACTAGCGAGGCCTCTAGTGAGGCCCTCTCAGGGTCAAAGTaGACTTTAAATGTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QESAASHTAVTSEASSEALSGSK*TLNVGS Trigger: AGACCCCACATTTAAAGTCCACTTTGACCCTGAGAG...GGCCTCACTAGAGGCCTCGCTAGTGACTGCTGTGTGGCTGGCTGCACTCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | CCTAAAGCACACCACTCCCCAGGCTTGATGCTCTGGTATAGCCACAGATGTTCACTTCGTGTAGTCCTCTaGGGGCAAGGGCTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PKAHHSPGLMLWYSHRCSLRVVL*GQGLQH Trigger: GTGCTGGAGCCCTTGCCCCCAGAGGACTACACGAAG...TGAACATCTGTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGTGTGCTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | CAGGAGAGTGCAGCCAGCCACACAGCAGTCACTAGCGAGGCCTCTAGTGAGGCCATCAACCATGTGGTGTaGTCCATCTTGCAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: QESAASHTAVTSEASSEAINHVV*SILQNK Trigger: TTTGTTCTGCAAGATGGAGCACACCACATGGTTGAT...GGCCTCACTAGAGGCCTCGCTAGTGACTGCTGTGTGGCTGGCTGCACTCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | CTTAACTCCTCTCCCCGCCACCTCTCTCTCTCTCCAAGGTCTCACTGTATAGCCCATCTGCATACAGTGTaGAGTAGTCCTCAATGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LNSSPRHLSLSPRSHCIAHLHTV*SSPQCR Trigger: ACGGCATTGAGGACTACTTCACACTGTATGCAGATG...GGCTATACAGTGAGACCTTGGAGAGAGAGAGAGGTGGCGGGGAGAGGAGTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | CTCCTCTCCCCGCCACCTCTCTCTCTCTCCAAGGTCTCACTGTATAGCCCTGTCACTGCTTTGGAACATTaGACCCAAATGTCTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLSPPPLSLSKVSLYSPVTALEH*TQMSHQ Trigger: CTGATGAGACATTTGGGTCCAATGTTCCAAAGCAGT...GACAGGGCTATACAGTGAGACCTTGGAGAGAGAGAGAGGTGGCGGGGAGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | CTTAACTCCTCTCCCCGCCACCTCTCTCTCTCTCCAAGGTCTCACTGTATAGCCCTTTGGGTTTTCCTGTaGTACAAGGGCAGCCATATT | + |
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Preference number: 4 (lower is better) Translates to: LNSSPRHLSLSPRSHCIALWVFL*YKGSHI Trigger: AATATGGCTGCCCTTGTATCACAGGAAAACCCAAAG...GGCTATACAGTGAGACCTTGGAGAGAGAGAGAGGTGGCGGGGAGAGGAGTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | CCTAAAGCACACCACTCCCCAGGCTTGATGCTCTGGTATAGCCACAGATGTTCAAGCCCAGAAAGCTTGTaGCCAGAAAGAGGGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PKAHHSPGLMLWYSHRCSSPESL*PERGPF Trigger: AAAAGGCCCTCTTTCTGGTCACAAGCTTTCTGGGCT...TGAACATCTGTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGTGTGCTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | GTCTTGGGCCTATGTGCAGGTGACACTGCAGTGGTCTTTAACATCAAATGCATGTTCCTGTGTGGATGGTaGACACGGCTGGTACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VLGLCAGDTAVVFNIKCMFLCGW*TRLVPA Trigger: TGCAGGTACCAGCCGTGTTCACCATCCACACAGGAA...CATGCATTTGATGTTAAAGACCACTGCAGTGTCACCTGCACATAGGCCCAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | CTAGCCACAGATGTGGGCTCTGTTCCTGGAACTGTTCCTATGGGATCCTGTTCTAGGCCTACAAATGGGTaGGAATCATCTCTTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LATDVGSVPGTVPMGSCSRPTNG*ESSLWG Trigger: CCCCCAAAGAGATGATTCGCACCCATTTGTAGGCCT...AGAACAGGATCCCATAGGAACAGTTCCAGGAACAGAGCCCACATCTGTGGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | AACTGGAAATGTTCCAGGGAGCCTGGATATCTGGAGATGGAACTGGGGTCCTCATGGTGTGCTCCATCTTaGAGAACAAACCGTAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NWKCSREPGYLEMELGSSWCAPS*RTNRSP Trigger: TGGGCTACGGTTTGTTCTGCAAGATGGAGCACACCA...TGAGGACCCCAGTTCCATCTCCAGATATCCAGGCTCCCTGGAACATTTCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR CAA 72 bp | AAGCTCCTGAACGTGGGCCAGCAGGGGCTCCTAAATTaGTTTCTGCCGTCAGAATTCATTCAAGCAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: KLLNVGQQGLLN*FLPSEFIQADS Trigger: GGAGTCTGCTTGAATGAATTCTGACGGCAGAAACAAATTTAGGAGCCCCTGCTGGCCCACGTTCAGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | CTTAACTCCTCTCCCCGCCACCTCTCTCTCTCTCCAAGGTCTCACTGTATAGCCAGAATCAATGTGAGCTaGGATCCCAATGTTCCGTAT | + |
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Preference number: 4 (lower is better) Translates to: LNSSPRHLSLSPRSHCIARINVS*DPNVPY Trigger: ATACGGAACATTGGGATCTCAGCTCACATTGATTCT...GGCTATACAGTGAGACCTTGGAGAGAGAGAGAGGTGGCGGGGAGAGGAGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | GTCTTGGGCCTATGTGCAGGTGACACTGCAGTGGTCTTTAACATCAAATGCATGGCTCCATGGAATCCATaGCAGCGCCAACTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: VLGLCAGDTAVVFNIKCMAPWNP*QRQLHL Trigger: AAGATGGAGTTGGCGCTGTCATGGATTCCATGGAGC...CATGCATTTGATGTTAAAGACCACTGCAGTGTCACCTGCACATAGGCCCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | ATTCACACACTAAACCACAGACGTACATACATGTGCACGGTGTCGGGTGTTGTGATTACTTTTCCAAACTaGCCGGCACCACCCGACTGC | + |
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Preference number: 4 (lower is better) Translates to: IHTLNHRRTYMCTVSGVVITFPN*PAPPDC Trigger: GCAGTCGGGTGGTGCCGGCCAGTTTGGAAAAGTAAT...CACAACACCCGACACCGTGCACATGTATGTACGTCTGTGGTTTAGTGTGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | GGAAACAGAGGCAGGGGGAATCCCTGGATGTTCTGCTCAGCAACACAAGCTTCAGGGGACAAACTGCTTTaGAACATTGGACCCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: GNRGRGNPWMFCSATQASGDKLL*NIGPKC Trigger: ACATTTGGGTCCAATGTTCCAAAGCAGTTTGTCCCC...TGAAGCTTGTGTTGCTGAGCAGAACATCCAGGGATTCCCCCTGCCTCTGTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | TGTTTCCTTACTGAGAATATACTCATAGTACCTAAAGCACACCACTCCCCAGGCCAGCTCTCCCATCCCTaGCACAATGGTCTCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: CFLTENILIVPKAHHSPGQLSHP*HNGLLA Trigger: AGCAAGGAGACCATTGTGTCAGGGATGGGAGAGCTG...GCCTGGGGAGTGGTGTGCTTTAGGTACTATGAGTATATTCTCAGTAAGGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | CCTAAAGCACACCACTCCCCAGGCTTGATGCTCTGGTATAGCCACAGATGTTCATTCGAATCAACCATGTaGTGTGCTCCATCTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PKAHHSPGLMLWYSHRCSFESTM*CAPSCR Trigger: TCTGCAAGATGGAGCACACCACATGGTTGATTCGAA...TGAACATCTGTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGTGTGCTTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | CTTAACTCCTCTCCCCGCCACCTCTCTCTCTCTCCAAGGTCTCACTGTATAGCCTGCGAATCATCTCTTTaGGGGTTCATTAAGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: LNSSPRHLSLSPRSHCIACESSL*GFIKIL Trigger: CAAAATCTTAATGAACCCCCAAAGAGATGATTCGCA...GGCTATACAGTGAGACCTTGGAGAGAGAGAGAGGTGGCGGGGAGAGGAGTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | ATTCACACACTAAACCACAGACGTACATACATGTGCACGGTGTCGGGTGTTGTGAGCCAGGCCTACAAATaGGTGCGAATCATCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: IHTLNHRRTYMCTVSGVVSQAYK*VRIISL Trigger: CAAAGAGATGATTCGCACCCATTTGTAGGCCTGGCT...CACAACACCCGACACCGTGCACATGTATGTACGTCTGTGGTTTAGTGTGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR TCA 90 bp | TGTTTCCTTACTGAGAATATACTCATAGTACCTAAAGCACACCACTCCCCAGGCAGGCCTCATTGCTATTaGAATGACAGGCTCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CFLTENILIVPKAHHSPGRPHCY*NDRLRN Trigger: GTTCCTGAGCCTGTCATTTCAATAGCAATGAGGCCT...GCCTGGGGAGTGGTGTGCTTTAGGTACTATGAGTATATTCTCAGTAAGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | TGTTTCCTTACTGAGAATATACTCATAGTACCTAAAGCACACCACTCCCCAGGCAAGAGCTCACCAAGCTaGTCATCTGAGTTAGCAACG | + |
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Preference number: 4 (lower is better) Translates to: CFLTENILIVPKAHHSPGKSSPS*SSELAT Trigger: CGTTGCTAACTCAGATGAGCAGCTTGGTGAGCTCTT...GCCTGGGGAGTGGTGTGCTTTAGGTACTATGAGTATATTCTCAGTAAGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | GTCTTGGGCCTATGTGCAGGTGACACTGCAGTGGTCTTTAACATCAAATGCATGCACTTGCACAGTCAATaGCAAACAATGCACAGATGT | + |
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Preference number: 4 (lower is better) Translates to: VLGLCAGDTAVVFNIKCMHLHSQ*QTMHRC Trigger: ACATCTGTGCATTGTTTGGCATTGACTGTGCAAGTG...CATGCATTTGATGTTAAAGACCACTGCAGTGTCACCTGCACATAGGCCCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | GACACTGCAGTGGTCTTTAACATCAAATGCATGCTGGAATCAACTGGAAATGTTTCACCTCGTGCATCGTaGCAATCCTGCCAGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTAVVFNIKCMLESTGNVSPRAS*QSCQCS Trigger: ACTACACTGGCAGGATTGCCACGATGCACGAGGTGA...AACATTTCCAGTTGATTCCAGCATGCATTTGATGTTAAAGACCACTGCAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | GTCTTGGGCCTATGTGCAGGTGACACTGCAGTGGTCTTTAACATCAAATGCATGCACCCTCTAAACCAATaGGTATTTGTACAAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGLCAGDTAVVFNIKCMHPLNQ*VFVQMQ Trigger: CTGCATTTGTACAAATACCCATTGGTTTAGAGGGTG...CATGCATTTGATGTTAAAGACCACTGCAGTGTCACCTGCACATAGGCCCAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | TGTTTCCTTACTGAGAATATACTCATAGTACCTAAAGCACACCACTCCCCAGGCGGACCTCAGATGGATTaGGCAGGTATTCTAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLTENILIVPKAHHSPGGPQMD*AGILKQ Trigger: CTGTTTTAGAATACCTGCCCAATCCATCTGAGGTCC...GCCTGGGGAGTGGTGTGCTTTAGGTACTATGAGTATATTCTCAGTAAGGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | ATTCACACACTAAACCACAGACGTACATACATGTGCACGGTGTCGGGTGTTGTGACCTGCCAATACCTTTaGAAAATTTCTCCAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHTLNHRRTYMCTVSGVVTCQYL*KISPDH Trigger: ATGATCTGGAGAAATTTTCCAAAGGTATTGGCAGGT...CACAACACCCGACACCGTGCACATGTATGTACGTCTGTGGTTTAGTGTGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | ATTCAAGCAGACTCCATCATCCCCAAGTGTGGTAGTCAAATAGTCAGTATATCCGTCAATGCCAAACAATaGACAGATGTCTCCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: IQADSIIPKCGSQIVSISVNAKQ*TDVSSI Trigger: TATGCTGGAGACATCTGTGCATTGTTTGGCATTGAC...GGATATACTGACTATTTGACTACCACACTTGGGGATGATGGAGTCTGCTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR GCA 90 bp | GACACTGCAGTGGTCTTTAACATCAAATGCATGCTGGAATCAACTGGAAATGTTCCGGCACCACCCGACTaGTTTTTATGTGTAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: DTAVVFNIKCMLESTGNVPAPPD*FLCVKS Trigger: TGATTTTACACATAAAAAGCAGTCGGGTGGTGCCGG...AACATTTCCAGTTGATTCCAGCATGCATTTGATGTTAAAGACCACTGCAGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CCA 90 bp | GACACTGCAGTGGTCTTTAACATCAAATGCATGCTGGAATCAACTGGAAATGTTAAAATCAAACGGCACTaGGGCAACAATGGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTAVVFNIKCMLESTGNVKIKRH*GNNGLS Trigger: AGAGAGACCATTGTTGCCCCAGTGCCGTTTGATTTT...AACATTTCCAGTTGATTCCAGCATGCATTTGATGTTAAAGACCACTGCAGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| 3UTR CAA 72 bp | ATTAATATCCACATTAGTCTTTTCCAGGCTATCGACTaGTTTGGTCTTTACCATCCGTCCATCACTAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: INIHISLFQAID*FGLYHPSITNL Trigger: TAGATTAGTGATGGACGGATGGTAAAGACCAAACAAGTCGATAGCCTGGAAAAGACTAATGTGGATATTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 90 bp | GGAACTGGCCCTGACGAACACCATCGGCGGGTCTTCCAATCAGCCTaGTTCCCCTGCCAGCCCAGGACTGCAGGGACCCGAGGGAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPDEHHRRVFQSA*FPCQPRTAGTRGNG Trigger: ACCGTTCCCTCGGGTCCCTGCAGTCCTGGGCTGGCAGGGGAAGCAGGCTGATTGGAAGACCCGCCGATGGTGTTCGTCAGGGCCAGTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 90 bp | TCACCAAGCTGCTCATCTGAGTTAGCAACGCACTCAATGAGCTCCTaGCGGTGGTCAGCGGCTGCGGCCCGCAATCCAGCCGGAATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SPSCSSELATHSMSS*RWSAAAARNPAGIS Trigger: CGAGATTCCGGCTGGATTGCGGGCCGCAGCCGCTGACCACCGGCAGGAGCTCATTGAGTGCGTTGCTAACTCAGATGAGCAGCTTGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 90 bp | AGCTGCTCATCTGAGTTAGCAACGCACTCAATGAGCTCCTGCCGGTaGTCAGCGGCTGCGGCCCGCAATCCAGCCGGAATCTCGTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: SCSSELATHSMSSCR*SAAAARNPAGISSY Trigger: ATATGACGAGATTCCGGCTGGATTGCGGGCCGCAGCCGCTGACCACCGGCAGGAGCTCATTGAGTGCGTTGCTAACTCAGATGAGCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 90 bp | CATGGTCTGGCACTGGACTCCGCCAACCGCACAGAGAACAAGGACTaGACCGTCCAGGACCCGCAGGGCTCTTTCCACTTCTATGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: HGLALDSANRTENKD*TVQDPQGSFHFYGK Trigger: TTTACCATAGAAGTGGAAAGAGCCCTGCGGGTCCTGGACGGTGCAGTCCTTGTTCTCTGTGCGGTTGGCGGAGTCCAGTGCCAGACCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 90 bp | TTCCACATGGTATACGTAGCTGCTGACTGGATCGTGATCCCTCGCTaGCTCTCCAGCTCCATGGAATCCATGACAGCGCCAACTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FHMVYVAADWIVIPR*LSSSMESMTAPTPS Trigger: AGATGGAGTTGGCGCTGTCATGGATTCCATGGAGCTGGAGAGGCAGCGAGGGATCACGATCCAGTCAGCAGCTACGTATACCATGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | CAGGAGAGTGCAGCCAGCCACACAGCAGTCACTAGCGAGGCCTCTAGTGAGGCCTTCTCCAGATCATTCTaGTTAGAAGGCCTCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QESAASHTAVTSEASSEAFSRSF*LEGLIA Trigger: AGCAATGAGGCCTTCTAACAAGAATGATCTGGAGAA...GGCCTCACTAGAGGCCTCGCTAGTGACTGCTGTGTGGCTGGCTGCACTCTCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 90 bp | CGCCAACTCCATCTTTACCTTTCACCTCGTGCATCGTGGCAATCCTaGCAGTGTAGTATAGCACCCGTTCTGTTAGCGTCGTCTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQLHLYLSPRASWQS*QCSIAPVLLASSSQ Trigger: CTGGGAAGACGACGCTAACAGAACGGGTGCTATACTACACTGGCAGGATTGCCACGATGCACGAGGTGAAAGGTAAAGATGGAGTTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | CCTAAAGCACACCACTCCCCAGGCTTGATGCTCTGGTATAGCCACAGATGTTCAGACACAATGGTCTCCTaGCTCTCAGGGTCAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKAHHSPGLMLWYSHRCSDTMVS*LSGSKW Trigger: CCACTTTGACCCTGAGAGCAAGGAGACCATTGTGTC...TGAACATCTGTGGCTATACCAGAGCATCAAGCCTGGGGAGTGGTGTGCTTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 90 bp | TGGTGTGCTCCATCTTGCAGAACAAACCGTAGCCCAGAAAGCTTGTaGCCAGAAAGAGGGCCTTTTTCGCAGGCATCCAGAAACCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WCAPSCRTNRSPESL*PERGPFSQASRNPF Trigger: AAAGGGGTTTCTGGATGCCTGCGAAAAAGGCCCTCTTTCTGGTCACAAGCTTTCTGGGCTACGGTTTGTTCTGCAAGATGGAGCACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | GTGAGTCAGGAGAGTGCAGCCAGCCACACAGCAGTCACTAGCGAGGCCTCTAGTTCTCTAAAGGCTACTTaGGGTTTTCCTGTGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: VSQESAASHTAVTSEASSSLKAT*GFPVIQ Trigger: TTGTATCACAGGAAAACCCAAAGTAGCCTTTAGAGA...ACTAGAGGCCTCGCTAGTGACTGCTGTGTGGCTGGCTGCACTCTCCTGACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | CTAGCCACAGATGTGGGCTCTGTTCCTGGAACTGTTCCTATGGGATCCTGTTCTCGGGGACAAACTGCTTaGGAACATTGGACCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LATDVGSVPGTVPMGSCSRGQTA*EHWTQM Trigger: CATTTGGGTCCAATGTTCCAAAGCAGTTTGTCCCCG...AGAACAGGATCCCATAGGAACAGTTCCAGGAACAGAGCCCACATCTGTGGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 90 bp | TCTCCCATCCCTGACACAATGGTCTCCTTGCTCTCAGGGTCAAAGTaGACTTTAAATGTGGGGTCTTCCCGTGTAAACCTGCCAATACCT | + |
|
Preference number: 5 (lower is better) Translates to: SPIPDTMVSLLSGSK*TLNVGSSRVNLPIP Trigger: AGGTATTGGCAGGTTTACACGGGAAGACCCCACATTTAAAGTCCACTTTGACCCTGAGAGCAAGGAGACCATTGTGTCAGGGATGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | AACTGGAAATGTTCCAGGGAGCCTGGATATCTGGAGATGGAACTGGGGTCCTCAGTTCCCTGGAATTCATaGGGGGCTATAACTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: NWKCSREPGYLEMELGSSVPWNS*GAITST Trigger: TGTGGAAGTTATAGCCCCCAATGAATTCCAGGGAAC...TGAGGACCCCAGTTCCATCTCCAGATATCCAGGCTCCCTGGAACATTTCCAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | CTTAACTCCTCTCCCCGCCACCTCTCTCTCTCTCCAAGGTCTCACTGTATAGCCGCTTCCAAATACTTATaGATGAGCTCTTCCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LNSSPRHLSLSPRSHCIAASKYL*MSSSCV Trigger: CACACAGGAAGAGCTCATCAATAAGTATTTGGAAGC...GGCTATACAGTGAGACCTTGGAGAGAGAGAGAGGTGGCGGGGAGAGGAGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 90 bp | ATGTTGATATTGATGTCTTTCCACATGGTATACGTAGCTGCTGACTaGATCGTGATCCCTCGCTGCCTCTCCAGCTCCATGGAATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: MLILMSFHMVYVAAD*IVIPRCLSSSMESM Trigger: CATGGATTCCATGGAGCTGGAGAGGCAGCGAGGGATCACGATCCAGTCAGCAGCTACGTATACCATGTGGAAAGACATCAATATCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 90 bp | GTAATCACTCCATGCCGCCGGTTAATCCCTGCGAACACTGTTCCCTaGAATTCATTGGGGGCTATAACTTCCACAGACATAATAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VITPCRRLIPANTVP*NSLGAITSTDIIGS Trigger: TGAGCCTATTATGTCTGTGGAAGTTATAGCCCCCAATGAATTCCAGGGAACAGTGTTCGCAGGGATTAACCGGCGGCATGGAGTGATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | CTTAACTCCTCTCCCCGCCACCTCTCTCTCTCTCCAAGGTCTCACTGTATAGCCCCCATTCGGTCCAGTTaGTTAATGAAGGTTAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNSSPRHLSLSPRSHCIAPIRSS*LMKVKK Trigger: CTTTTTAACCTTCATTAACAAACTGGACCGAATGGG...GGCTATACAGTGAGACCTTGGAGAGAGAGAGAGGTGGCGGGGAGAGGAGTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | AACTGGAAATGTTCCAGGGAGCCTGGATATCTGGAGATGGAACTGGGGTCCTCATGGACCTCAGATGGATaGGGCAGGTATTCTAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: NWKCSREPGYLEMELGSSWTSDG*GRYSKT Trigger: TGTTTTAGAATACCTGCCCAATCCATCTGAGGTCCA...TGAGGACCCCAGTTCCATCTCCAGATATCCAGGCTCCCTGGAACATTTCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 90 bp | CCTTCTCCAGCTCGGATGAAAGAGATTTCATTCGAATCAACCATGTaGTGTGCTCCATCTTGCAGAACAAACCGTAGCCCAGAAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPARMKEISFESTM*CAPSCRTNRSPESL Trigger: CAAGCTTTCTGGGCTACGGTTTGTTCTGCAAGATGGAGCACACCACATGGTTGATTCGAATGAAATCTCTTTCATCCGAGCTGGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 90 bp | AAATACTTATTGATGAGCTCTTCCTGTGTGGATGGTGAACACGGCTaGTACCTGCAGTACTCCATCGTGTACTCTCCTTTTCCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KYLLMSSSCVDGEHG*YLQYSIVYSPFPSV Trigger: CACAGAGGGAAAAGGAGAGTACACGATGGAGTACTGCAGGTACCAGCCGTGTTCACCATCCACACAGGAAGAGCTCATCAATAAGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 90 bp | TGTAGCTTCCAAATACTTATTGATGAGCTCTTCCTGTGTGGATGGTaGACACGGCTGGTACCTGCAGTACTCCATCGTGTACTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSFQILIDELFLCGW*TRLVPAVLHRVLSF Trigger: AAAGGAGAGTACACGATGGAGTACTGCAGGTACCAGCCGTGTTCACCATCCACACAGGAAGAGCTCATCAATAAGTATTTGGAAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | TGTTTCCTTACTGAGAATATACTCATAGTACCTAAAGCACACCACTCCCCAGGCGCCATTTGCCAAGGCTaGTTTAAGAGCACCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLTENILIVPKAHHSPGAICQG*FKSTFS Trigger: GGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGGC...GCCTGGGGAGTGGTGTGCTTTAGGTACTATGAGTATATTCTCAGTAAGGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | GATACCCAGGATACGTATTATAACTTAACTCCTCTCCCCGCCACCTCTCTCTCTAACTGCTTTGGAACATaGGACCCAAATGTCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DTQDTYYNLTPLPATSLSNCFGT*DPNVSS Trigger: TGATGAGACATTTGGGTCCAATGTTCCAAAGCAGTT...AGAGAGAGAGGTGGCGGGGAGAGGAGTTAAGTTATAATACGTATCCTGGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | GATACCCAGGATACGTATTATAACTTAACTCCTCTCCCCGCCACCTCTCTCTCTAACCTGCCAATACCTTaGGAAAATTTCTCCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: DTQDTYYNLTPLPATSLSNLPIP*ENFSRS Trigger: TGATCTGGAGAAATTTTCCAAAGGTATTGGCAGGTT...AGAGAGAGAGGTGGCGGGGAGAGGAGTTAAGTTATAATACGTATCCTGGGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 90 bp | AAATCACCCTCTAAACCAATGGGTATTTGTACAAATGCAGCATTGTaGTTTAGTTTAGATCTCATTTGTTGGAGGGCCCTGGATGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KSPSKPMGICTNAAL*FSLDLICWRALDGL Trigger: TAACCCATCCAGGGCCCTCCAACAAATGAGATCTAAACTAAATCACAATGCTGCATTTGTACAAATACCCATTGGTTTAGAGGGTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 90 bp | GGAAAATTTCTCCAGATCATTCTTGTTAGAAGGCCTCATTGCTATTaGAATGACAGGCTCAGGAACATGAATCGATTCCATAGAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKFLQIILVRRPHCY*NDRLRNMNRFHRKV Trigger: GACCTTTCTATGGAATCGATTCATGTTCCTGAGCCTGTCATTTCAATAGCAATGAGGCCTTCTAACAAGAATGATCTGGAGAAATTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 90 bp | TTTGTTTGTGAATGTATCTCCACTTGCACAGTCAATGCCAAACAATaGACAGATGTCTCCAGCATATACTTCTTCAACATCCTCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: FVCECISTCTVNAKQ*TDVSSIYFFNILHH Trigger: ATGATGGAGGATGTTGAAGAAGTATATGCTGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCAAGTGGAGATACATTCACAAACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 90 bp | CATAGAAAGGTCACTGTTATCTTTGTTTGTGAATGTATCTCCACTTaGACAGTCAATGCCAAACAATGCACAGATGTCTCCAGCATATAC | + |
|
Preference number: 5 (lower is better) Translates to: HRKVTVIFVCECIST*TVNAKQCTDVSSIY Trigger: GTATATGCTGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCAAGTGGAGATACATTCACAAACAAAGATAACAGTGACCTTTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | GATGTTCATAAGGACAGGGAGCTACTGAATAATTGGAACCACAGTATCTATTTGAGCGTCCAAAAGAGGTaGAACTCCTTTGTTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DVHKDRELLNNWNHSIYLSVQKR*NSFVFQ Trigger: TTGAAAAACAAAGGAGTTCAACCTCTTTTGGACGCT...CAAATAGATACTGTGGTTCCAATTATTCAGTAGCTCCCTGTCCTTATGAACATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS-3UTR CAA 90 bp | GATGTTCATAAGGACAGGGAGCTACTGAATAATTGGAACCACAGTATCTATTTGAGGTCACTGTTATCTTaGTTTGTGAATGTATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DVHKDRELLNNWNHSIYLRSLLS*FVNVSP Trigger: TGGAGATACATTCACAAACAAAGATAACAGTGACCT...CAAATAGATACTGTGGTTCCAATTATTCAGTAGCTCCCTGTCCTTATGAACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 72 bp | CACCATCGGCGGGTCTTCCAATCAGCCTGCTTCCCCTaGCAGCCCAGGACTGCAGGGACCCGAGGGAACGGT | + |
|
Preference number: 6 (lower is better) Translates to: HHRRVFQSACFP*QPRTAGTRGNG Trigger: ACCGTTCCCTCGGGTCCCTGCAGTCCTGGGCTGGCAGGGGAAGCAGGCTGATTGGAAGACCCGCCGATGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 72 bp | GCACTGGACTCCGCCAACCGCACAGAGAACAAGGACTaGACCGTCCAGGACCCGCAGGGCTCTTTCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALDSANRTENKD*TVQDPQGSFHF Trigger: GAAGTGGAAAGAGCCCTGCGGGTCCTGGACGGTGCAGTCCTTGTTCTCTGTGCGGTTGGCGGAGTCCAGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 72 bp | AACGCACTCAATGAGCTCCTGCCGGTGGTCAGCGGCTaGGGCCCGCAATCCAGCCGGAATCTCGTCATATCG | + |
|
Preference number: 6 (lower is better) Translates to: NALNELLPVVSG*GPQSSRNLVIS Trigger: CGATATGACGAGATTCCGGCTGGATTGCGGGCCGCAGCCGCTGACCACCGGCAGGAGCTCATTGAGTGCGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 72 bp | TCTGAGTTAGCAACGCACTCAATGAGCTCCTGCCGGTaGTCAGCGGCTGCGGCCCGCAATCCAGCCGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SELATHSMSSCR*SAAAARNPAGI Trigger: GATTCCGGCTGGATTGCGGGCCGCAGCCGCTGACCACCGGCAGGAGCTCATTGAGTGCGTTGCTAACTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
||
| CDS GCA 72 bp | GTATACGTAGCTGCTGACTGGATCGTGATCCCTCGCTaGCTCTCCAGCTCCATGGAATCCATGACAGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VYVAADWIVIPR*LSSSMESMTAP Trigger: TGGCGCTGTCATGGATTCCATGGAGCTGGAGAGGCAGCGAGGGATCACGATCCAGTCAGCAGCTACGTATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 72 bp | ATACTTCTTCAACATCCTCCATCATGTCGGCGTGCATaGGCACTAGCCGCTGCACGCGCACTTTCTTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ILLQHPPSCRRA*ALAAARALSSR Trigger: CCGGGAAGAAAGTGCGCGTGCAGCGGCTAGTGCGCATGCACGCCGACATGATGGAGGATGTTGAAGAAGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 72 bp | GCATATACTTCTTCAACATCCTCCATCATGTCGGCGTaGATGCGCACTAGCCGCTGCACGCGCACTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AYTSSTSSIMSA*MRTSRCTRTFF Trigger: GAAGAAAGTGCGCGTGCAGCGGCTAGTGCGCATGCACGCCGACATGATGGAGGATGTTGAAGAAGTATATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 72 bp | CTGCCCTGTAATCACTCCATGCCGCCGGTTAATCCCTaGGAACACTGTTCCCTGGAATTCATTGGGGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LPCNHSMPPVNP*EHCSLEFIGGY Trigger: ATAGCCCCCAATGAATTCCAGGGAACAGTGTTCGCAGGGATTAACCGGCGGCATGGAGTGATTACAGGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 72 bp | TTAAAAAGGGAACGTTGTAGCGCTTCATCTGACGACTaGCTGTCATGGTCTGGCACTGGACTCCGCCAACCG | + |
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Preference number: 6 (lower is better) Translates to: LKRERCSASSDD*LSWSGTGLRQP Trigger: CGGTTGGCGGAGTCCAGTGCCAGACCATGACAGTCAGTCGTCAGATGAAGCGCTACAACGTTCCCTTTTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 72 bp | CTTTTCTTCCAGGAAGAGCTCACCAAGCTGCTCATCTaGGTTAGCAACGCACTCAATGAGCTCCTGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LFFQEELTKLLI*VSNALNELLPV Trigger: CACCGGCAGGAGCTCATTGAGTGCGTTGCTAACTCAGATGAGCAGCTTGGTGAGCTCTTCCTGGAAGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 72 bp | TTGATGTCTTTCCACATGGTATACGTAGCTGCTGACTaGATCGTGATCCCTCGCTGCCTCTCCAGCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LMSFHMVYVAAD*IVIPRCLSSSM Trigger: CATGGAGCTGGAGAGGCAGCGAGGGATCACGATCCAGTCAGCAGCTACGTATACCATGTGGAAAGACATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CAA 72 bp | AGGTGCAGCTCTCCCATCCCTGACACAATGGTCTCCTaGCTCTCAGGGTCAAAGTGGACTTTAAATGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RCSSPIPDTMVS*LSGSKWTLNVG Trigger: CCCCACATTTAAAGTCCACTTTGACCCTGAGAGCAAGGAGACCATTGTGTCAGGGATGGGAGAGCTGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 72 bp | CCATCTTGCAGAACAAACCGTAGCCCAGAAAGCTTGTaGCCAGAAAGAGGGCCTTTTTCGCAGGCATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSCRTNRSPESL*PERGPFSQASR Trigger: TCTGGATGCCTGCGAAAAAGGCCCTCTTTCTGGTCACAAGCTTTCTGGGCTACGGTTTGTTCTGCAAGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 72 bp | CCATGCCGCCGGTTAATCCCTGCGAACACTGTTCCCTaGAATTCATTGGGGGCTATAACTTCCACAGACATA | + |
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Preference number: 6 (lower is better) Translates to: PCRRLIPANTVP*NSLGAITSTDI Trigger: TATGTCTGTGGAAGTTATAGCCCCCAATGAATTCCAGGGAACAGTGTTCGCAGGGATTAACCGGCGGCATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 72 bp | CCTGACACAATGGTCTCCTTGCTCTCAGGGTCAAAGTaGACTTTAAATGTGGGGTCTTCCCGTGTAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: PDTMVSLLSGSK*TLNVGSSRVNL Trigger: CAGGTTTACACGGGAAGACCCCACATTTAAAGTCCACTTTGACCCTGAGAGCAAGGAGACCATTGTGTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 72 bp | GGCAAGGGCTCCAGCACTCCTATTACTTTTCCAAACTaGCCGGCACCACCCGACTGCTTTTTATGTGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: GKGSSTPITFPN*PAPPDCFLCVK Trigger: TTTTACACATAAAAAGCAGTCGGGTGGTGCCGGCCAGTTTGGAAAAGTAATAGGAGTGCTGGAGCCCTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 72 bp | TTGATGAGCTCTTCCTGTGTGGATGGTGAACACGGCTaGTACCTGCAGTACTCCATCGTGTACTCTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LMSSSCVDGEHG*YLQYSIVYSPF Trigger: AAAAGGAGAGTACACGATGGAGTACTGCAGGTACCAGCCGTGTTCACCATCCACACAGGAAGAGCTCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CAA 90 bp | CCATGCCGCCGGTTAATCCCTGCGAACACTGTTCCCTGGAATTCATaGGGGGCTATAACTTCCACAGACATAATAGGCTCAATAATACAT | + |
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Preference number: 6 (lower is better) Translates to: PCRRLIPANTVPWNS*GAITSTDIIGSIIH Trigger: ATGTATTATTGAGCCTATTATGTCTGTGGAAGTTATAGCCCCCAATGAATTCCAGGGAACAGTGTTCGCAGGGATTAACCGGCGGCATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 72 bp | CAAATACTTATTGATGAGCTCTTCCTGTGTGGATGGTaGACACGGCTGGTACCTGCAGTACTCCATCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: QILIDELFLCGW*TRLVPAVLHRV Trigger: TACACGATGGAGTACTGCAGGTACCAGCCGTGTTCACCATCCACACAGGAAGAGCTCATCAATAAGTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CCA 72 bp | GCTCGGATGAAAGAGATTTCATTCGAATCAACCATGTaGTGTGCTCCATCTTGCAGAACAAACCGTAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ARMKEISFESTM*CAPSCRTNRSP Trigger: TGGGCTACGGTTTGTTCTGCAAGATGGAGCACACCACATGGTTGATTCGAATGAAATCTCTTTCATCCGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CAA 72 bp | CGGTTAATCCCTGCGAACACTGTTCCCTGGAATTCATaGGGGGCTATAACTTCCACAGACATAATAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RLIPANTVPWNS*GAITSTDIIGS Trigger: TGAGCCTATTATGTCTGTGGAAGTTATAGCCCCCAATGAATTCCAGGGAACAGTGTTCGCAGGGATTAACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CAA 90 bp | AAATCAAACGGCACTGGGGCAACAATGGTCTCTCTAAAGGCTACTTaGGGTTTTCCTGTGATACAAGGGCAGCCATATTCTCTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: KSNGTGATMVSLKAT*GFPVIQGQPYSLSI Trigger: AATGGAGAGAGAATATGGCTGCCCTTGTATCACAGGAAAACCCAAAGTAGCCTTTAGAGAGACCATTGTTGCCCCAGTGCCGTTTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CAA 72 bp | AATGTGGGGTCTTCCCGTGTAAACCTGCCAATACCTTaGGAAAATTTCTCCAGATCATTCTTGTTAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: NVGSSRVNLPIP*ENFSRSFLLEG Trigger: GCCTTCTAACAAGAATGATCTGGAGAAATTTTCCAAAGGTATTGGCAGGTTTACACGGGAAGACCCCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS CAA 90 bp | TGGACTTTAAATGTGGGGTCTTCCCGTGTAAACCTGCCAATACCTTaGGAAAATTTCTCCAGATCATTCTTGTTAGAAGGCCTCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: WTLNVGSSRVNLPIP*ENFSRSFLLEGLIA Trigger: AGCAATGAGGCCTTCTAACAAGAATGATCTGGAGAAATTTTCCAAAGGTATTGGCAGGTTTACACGGGAAGACCCCACATTTAAAGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 72 bp | GGCCTCATTGCTATTGAAATGACAGGCTCAGGAACATaGATCGATTCCATAGAAAGGTCACTGTTATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: GLIAIEMTGSGT*IDSIERSLLSL Trigger: CAAAGATAACAGTGACCTTTCTATGGAATCGATTCATGTTCCTGAGCCTGTCATTTCAATAGCAATGAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 72 bp | CTCCAGATCATTCTTGTTAGAAGGCCTCATTGCTATTaGAATGACAGGCTCAGGAACATGAATCGATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LQIILVRRPHCY*NDRLRNMNRFH Trigger: ATGGAATCGATTCATGTTCCTGAGCCTGTCATTTCAATAGCAATGAGGCCTTCTAACAAGAATGATCTGGAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS GCA 72 bp | GAATGTATCTCCACTTGCACAGTCAATGCCAAACAATaGACAGATGTCTCCAGCATATACTTCTTCAACATC | + |
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Preference number: 6 (lower is better) Translates to: ECISTCTVNAKQ*TDVSSIYFFNI Trigger: GATGTTGAAGAAGTATATGCTGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCAAGTGGAGATACATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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| CDS TCA 72 bp | TCTAAACCAATGGGTATTTGTACAAATGCAGCATTGTaGTTTAGTTTAGATCTCATTTGTTGGAGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SKPMGICTNAAL*FSLDLICWRAL Trigger: CAGGGCCCTCCAACAAATGAGATCTAAACTAAATCACAATGCTGCATTTGTACAAATACCCATTGGTTTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077271.9 |
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