Pregenerated sensors for GFI1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026815Ensembl transcript IDs: ENSMUST00000028156.8, ENSMUST00000164290.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATGCTaGTTCCAGGAGGACTGGGATCAGGATTGGAAAGGAGAGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RSSSLKRSREAHGQC*FQEDWDQDWKGEAG Trigger: GCCAGCCTCTCCTTTCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR CCA 90 bp | CGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTaGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGG | + |
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Preference number: 1 (lower is better) Translates to: RTDSHISCGQRRSVA*LRSSSLKRSREAHG Trigger: CCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR TCA 90 bp | GTAGCTGTCTGTGCTCTGGCATTGAATGAGACCAGAGCATGTCTGTaGCTGCCTCAGTTCAGAAAGGCCCGAACTGACTCCCACATCAGC | + |
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Preference number: 1 (lower is better) Translates to: VAVCALALNETRACL*LPQFRKARTDSHIS Trigger: GCTGATGTGGGAGTCAGTTCGGGCCTTTCTGAACTGAGGCAGTCACAGACATGCTCTGGTCTCATTCAATGCCAGAGCACAGACAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR GCA 90 bp | TTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATaGTGCTTCCAGGAGGACTGGGATCAGGATTGGAAAGGAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LRSSSLKRSREAHGQ*CFQEDWDQDWKGEA Trigger: AGCCTCTCCTTTCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR CCA 90 bp | AATTCAGTCACTAGACCCAGAGAAGCAAGCAAGAGGGTTTCTCTGTaGATCCTGGCTCTTGCCTGGTTTTGCCATGTCCACGAGGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: NSVTRPREASKRVSL*ILALAWFCHVHEGF Trigger: AAAGCCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCTTGCTTCTCTGGGTCTAGTGACTGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCACATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACGCTCATGGGCAATGCTaGTTCCAGGAGGACTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: RAHLAEAEGRQTSRPGDNAHGQC*FQEDWD Trigger: ATCCCAGTCCTCCTGGAAGCAGCATTGCCCATGAGC...GTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATGTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGGAGCCTGACTCCCAGTGGGCGGATGGATGTGGTGAGAGGTGGGGGACAGGAGTGTGGCTTGGTTaGGGTCATCCAGTCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: PQEPDSQWADGCGERWGTGVWLG*GHPVSK Trigger: TTTTGAGACTGGATGACCTCAACCAAGCCACACTCC...TGTCCCCCACCTCTCACCACATCCATCCGCCCACTGGGAGTCAGGCTCCTGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACTCTGACTTTCTCTGTGGATCCTaGCTCTTGCCTGGTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HLAEAEGRQTSRPGDNSDFLCGS*LLPGFA Trigger: GGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAA...GTCAGAGTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTCACCTCAGGAGCCTGACTCCCAGTGGGCGGATGGATGTGGTGAGAGGTAAGAGGGTTTCTCTGTaGATCCTGGCTCTTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VAHLRSLTPSGRMDVVRGKRVSL*ILALAW Trigger: CCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTT...ACCTCTCACCACATCCATCCGCCCACTGGGAGTCAGGCTCCTGAGGTGAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCAGAGCATGTCTGTGACTGCCTCAGTTCAGAAAGGCCCGAACTGACTCCCAGGAGGAGTGTGGCTTaGTTGAGGTCATCCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: RPEHVCDCLSSERPELTPRRSVA*LRSSSL Trigger: GAGACTGGATGACCTCAACCAAGCCACACTCCTCCT...GGGAGTCAGTTCGGGCCTTTCTGAACTGAGGCAGTCACAGACATGCTCTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGAAGCAAGCAAGAGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTGACTGGGATCAGGATTaGAAAGGAGAGGCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PREASKRVSLWILALAWFDWDQD*KGEAGL Trigger: AAGGCCAGCCTCTCCTTTCCAATCCTGATCCCAGTC...AAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCTTGCTTCTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGTCTGTGACTGCCTCAGTTCAGAAAGGCCCGAACTGACTCCCACATCAAGGAGGAGTGTGGCTTaGTTGAGGTCATCCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: EHVCDCLSSERPELTPTSRRSVA*LRSSSL Trigger: GAGACTGGATGACCTCAACCAAGCCACACTCCTCCT...TGATGTGGGAGTCAGTTCGGGCCTTTCTGAACTGAGGCAGTCACAGACATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTCAGAGGAGGAGTGTGGCTTGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGGACTGGGATCAGGATTaGAAAGGAGAGGCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: WSEEECGLVEVIQSQKKQDWDQD*KGEAGL Trigger: AAGGCCAGCCTCTCCTTTCCAATCCTGATCCCAGTC...CTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGTCTGTGACTGCCTCAGTTCAGAAAGGCCCGAACTGACTCCCACATCATGCTTCCAGGAGGACTaGGATCAGGATTGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: EHVCDCLSSERPELTPTSCFQED*DQDWKG Trigger: TCCTTTCCAATCCTGATCCCAGTCCTCCTGGAAGCA...TGATGTGGGAGTCAGTTCGGGCCTTTCTGAACTGAGGCAGTCACAGACATGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCAGCCAAAAAGAGAATCCCTAAAAATTCAGTCACTAGACCCAGAGAAGATCCTGGCTCTTGCCTaGTTTTGCCATGTCCACGAG | + |
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Preference number: 2 (lower is better) Translates to: LWQPKRESLKIQSLDPEKILALA*FCHVHE Trigger: CTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGAT...CTTCTCTGGGTCTAGTGACTGAATTTTTAGGGATTCTCTTTTTGGCTGCCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGCAGCCAAAAAGAGAATCCCTAAAAATTCAGTCACTAGACCCAGAGAAGGGAGTGTGGCTTGGTTaGGGTCATCCAGTCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LWQPKRESLKIQSLDPEKGVWLG*GHPVSK Trigger: TTTTGAGACTGGATGACCTCAACCAAGCCACACTCC...CTTCTCTGGGTCTAGTGACTGAATTTTTAGGGATTCTCTTTTTGGCTGCCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR CCA 72 bp | GGGCAATGCTGCTTCCAGGAGGACTGGGATCAGGATTaGAAAGGAGAGGCTGGCCTTCAGGCGAGACACACT | + |
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Preference number: 3 (lower is better) Translates to: GQCCFQEDWDQD*KGEAGLQARHT Trigger: AGTGTGTCTCGCCTGAAGGCCAGCCTCTCCTTTCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR CCA 72 bp | CCAGAGAAGCAAGCAAGAGGGTTTCTCTGTGGATCCTaGCTCTTGCCTGGTTTTGCCATGTCCACGAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PEKQARGFLCGS*LLPGFAMSTRA Trigger: AGCCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCTTGCTTCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTTGCCATGTCCACGAGGGCGTCTGTGCTCTGGCATaGAATGAGACCAGAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: RVSLWILALAWFCHVHEGVCALA*NETRAC Trigger: ACATGCTCTGGTCTCATTCAATGCCAGAGCACAGAC...GCCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR TCA 72 bp | ATGTCTGTGACTGCCTCAGTTCAGAAAGGCCCGAACTaGCTCCCACATCAGCTGTGGTCAGAGGAGGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: MSVTASVQKGPN*LPHQLWSEEEC Trigger: ACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGCCTTTCTGAACTGAGGCAGTCACAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR CCA 72 bp | AGCAAGAGGGTTTCTCTGTGGATCCTGGCTCTTGCCTaGTTTTGCCATGTCCACGAGGGCTTTGTAGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SKRVSLWILALA*FCHVHEGFVAV Trigger: GACAGCTACAAAGCCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR TCA 72 bp | ACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTGGTTaGGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: TSAVVRGGVWLG*GHPVSKEAERL Trigger: GAGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR TCA 72 bp | TGTGCTCTGGCATTGAATGAGACCAGAGCATGTCTGTaGCTGCCTCAGTTCAGAAAGGCCCGAACTGACTCC | + |
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Preference number: 3 (lower is better) Translates to: CALALNETRACL*LPQFRKARTDS Trigger: GGAGTCAGTTCGGGCCTTTCTGAACTGAGGCAGTCACAGACATGCTCTGGTCTCATTCAATGCCAGAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR TCA 72 bp | CGAGGGCTTTGTAGCTGTCTGTGCTCTGGCATTGAATaGGACCAGAGCATGTCTGTGACTGCCTCAGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: RGLCSCLCSGIE*DQSMSVTASVQ Trigger: CTGAACTGAGGCAGTCACAGACATGCTCTGGTCTCATTCAATGCCAGAGCACAGACAGCTACAAAGCCCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR CCA 72 bp | TCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTaGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: SHISCGQRRSVA*LRSSSLKRSRE Trigger: CTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR CCA 72 bp | ACTAGACCCAGAGAAGCAAGCAAGAGGGTTTCTCTGTaGATCCTGGCTCTTGCCTGGTTTTGCCATGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: TRPREASKRVSL*ILALAWFCHVH Trigger: GTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCTTGCTTCTCTGGGTCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR GCA 72 bp | AGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATGCTaGTTCCAGGAGGACTGGGATCAGGATTGGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SLKRSREAHGQC*FQEDWDQDWKG Trigger: TCCTTTCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| 3UTR GCA 72 bp | TCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATaGTGCTTCCAGGAGGACTGGGATCAGGATTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SSLKRSREAHGQ*CFQEDWDQDWK Trigger: TTTCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | AGAAAGGCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTGGCCGGGTTCCGCTGTaGGAGCGGCGGACATGCACT | + |
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Preference number: 4 (lower is better) Translates to: RKARTDSHISCGQRRSVAGRVPL*ERRTCT Trigger: AGTGCATGTCCGCCGCTCTCACAGCGGAACCCGGCC...AGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGCCTTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | AGAGCACATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACGGTGGACAGGGTGGATaGACGCTTGAAGGCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RAHLAEAEGRQTSRPGDNGGQGG*TLEGFA Trigger: GGCAAAGCCTTCAAGCGTTCATCCACCCTGTCCACC...GTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATGTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CCA 90 bp | GCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTGGTTGGAGGAAACGAGGCCCTaGGGGGTCAGGTGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ARTDSHISCGQRRSVAWLEETRP*GVRCRW Trigger: CCACCTGCACCTGACCCCCCAGGGCCTCGTTTCCTC...CAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164290.8 |
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| CDS-3UTR CCA 90 bp | CATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACTCTGACGTAAGTGTCCATGCCTaGAGAGTAGCGGAGGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: HLAEAEGRQTSRPGDNSDVSVHA*RVAEAE Trigger: TTCCGCCTCCGCTACTCTCCAGGCATGGACACTTAC...GTCAGAGTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CCA 90 bp | GGAAAGGAGAGGCTGGCCTTCAGGCGAGACACACTAAAGCAGGCGGCCAACCGTAGGTCCACCTTGCGCTaGAAGCCCTTGGTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: GKERLAFRRDTLKQAANRRSTLR*KPLVHS Trigger: GCTGTGCACCAAGGGCTTCCAGCGCAAGGTGGACCT...ACGGTTGGCCGCCTGCTTTAGTGTGTCTCGCCTGAAGGCCAGCCTCTCCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CCA 90 bp | CATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACTCTGACATCTTGGGAAGGCTCTaGTTCAGCAACATCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: HLAEAEGRQTSRPGDNSDILGRL*FSNISR Trigger: GCGGGAGATGTTGCTGAACCAGAGCCTTCCCAAGAT...GTCAGAGTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | GCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTGGTTGTTGGAAGCGGTGTGCTaGGAAGAGGGCTGGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: ARTDSHISCGQRRSVAWLLEAVC*EEGWHS Trigger: AGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAA...CAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | TGGGATCAGGATTGGAAAGGAGAGGCTGGCCTTCAGGCGAGACACACTAAAGCAAGGCCCCTCTGGGGCTaGGGCCATCTTGGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WDQDWKGEAGLQARHTKARPLWG*GHLGKA Trigger: AGCCTTCCCAAGATGGCCTCAGCCCCAGAGGGGCCT...TGCTTTAGTGTGTCTCGCCTGAAGGCCAGCCTCTCCTTTCCAATCCTGATCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | TCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATGCTGCTTCCAGGAGGGCCGGGTTCCGCTGTaGGAGCGGCGGACATGCACT | + |
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Preference number: 4 (lower is better) Translates to: SSSLKRSREAHGQCCFQEGRVPL*ERRTCT Trigger: AGTGCATGTCCGCCGCTCTCACAGCGGAACCCGGCC...CTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | GCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTGGTTGGGTGGACAGGGTGGATaGACGCTTGAAGGCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ARTDSHISCGQRRSVAWLGGQGG*TLEGFA Trigger: GGCAAAGCCTTCAAGCGTTCATCCACCCTGTCCACC...CAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR GCA 90 bp | AGAGCACATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACCGTGGCCAAAGGTTTTaGCACAGACATCACAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RAHLAEAEGRQTSRPGDNRGQRF*HRHHRQ Trigger: TTGCCTGTGATGTCTGTGGCAAAACCTTTGGCCACG...GTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATGTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CCA 90 bp | GTGGCTCACCTCAGGAGCCTGACTCCCAGTGGGCGGATGGATGTGGTGAGAGGTTCCAAGCTCACAGCGTaGCCAAAGGTTTTGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: VAHLRSLTPSGRMDVVRGSKLTA*PKVLPQ Trigger: CTGTGGCAAAACCTTTGGCCACGCTGTGAGCTTGGA...ACCTCTCACCACATCCATCCGCCCACTGGGAGTCAGGCTCCTGAGGTGAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGGCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTAGGTCCACCTTGCGCTaGAAGCCCTTGGTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: RKARTDSHISCGQRRSVARSTLR*KPLVHS Trigger: GCTGTGCACCAAGGGCTTCCAGCGCAAGGTGGACCT...AGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGCCTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | GAGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTTGCCATGTCCACGAGGGTTGGAAGCGGTGTGCTaGGAAGAGGGCTGGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: EGFSVDPGSCLVLPCPRGLEAVC*EEGWHS Trigger: AGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAA...CCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTGGTGGGTGGATGAACGCTTaGAGGCTTTGCCACACATCC | + |
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Preference number: 4 (lower is better) Translates to: RPELTPTSAVVRGGVWLGGWMNA*RLCHTS Trigger: GGATGTGTGGCAAAGCCTTCAAGCGTTCATCCACCC...ACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR TCA 90 bp | CCCAGAGAAGCAAGCAAGAGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTGGCTGGGACGCCCTGTaGGTGGACGTGAGTATGCTG | + |
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Preference number: 4 (lower is better) Translates to: PREASKRVSLWILALAWFGWDAL*VDVSML Trigger: CAGCATACTCACGTCCACTCACAGGGCGTCCCAGCC...AAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCTTGCTTCTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164290.8 |
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| CDS-3UTR GCA 90 bp | CATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACTCTGACCTGGCTATGCTCTTTTaGCACAGGAATTACAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HLAEAEGRQTSRPGDNSDLAMLF*HRNYSR Trigger: CCTGCTGTAATTCCTGTGGCAAAAGAGCATAGCCAG...GTCAGAGTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR GCA 90 bp | TCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATGCTGCTTCCAGGAGCCAAGGGAGACTCTGTaGTGGGCACGAGGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLKRSREAHGQCCFQEPRETL*WARGGC Trigger: GCAGCCCCCTCGTGCCCAGCACAGAGTCTCCCTTGG...CTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGAGAGGCTGGCCTTCAGGCGAGACACACTAAAGCAGGCGGCCAACCGTTATCCCAGGAGAAGCTaGGCTTGTAGAAAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKERLAFRRDTLKQAANRYPRRS*ACRKGV Trigger: CACCCCCTTTCTACAAGCCCAGCTTCTCCTGGGATA...ACGGTTGGCCGCCTGCTTTAGTGTGTCTCGCCTGAAGGCCAGCCTCTCCTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCACCTCAGGAGCCTGACTCCCAGTGGGCGGATGGATGTGGTGAGAGGTCTGGCTATGCTCTTTTaGCACAGGAATTACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAHLRSLTPSGRMDVVRGLAMLF*HRNYSR Trigger: CCTGCTGTAATTCCTGTGGCAAAAGAGCATAGCCAG...ACCTCTCACCACATCCATCCGCCCACTGGGAGTCAGGCTCCTGAGGTGAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGAGGCTCATGGGCAATGCTGCTTCCAGGAGGACTGGGATCAGGATTGGAAGTGGTAAGTGTCCATaGCTGGAGAGTAGCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AERLMGNAASRRTGIRIGSGKCP*LESSGG Trigger: GCCTCCGCTACTCTCCAGGCATGGACACTTACCACT...TCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTTGCCATGTCCACGAGGGCGTAAGTGTCCATGCCTaGAGAGTAGCGGAGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVSLWILALAWFCHVHEGVSVHA*RVAEAE Trigger: TTCCGCCTCCGCTACTCTCCAGGCATGGACACTTAC...GCCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTTGCCATGTCCACGAGGGCTCTCCCGCTCCTGTTTaGTTGTGTTCCAGTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSLWILALAWFCHVHEGSPAPV*LCSSPR Trigger: CCTTGGACTGGAACACAATCAAACAGGAGCGGGAGA...GCCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR TCA 90 bp | CGCCAGACCTCTAGGCCAGGGGACAACTCTGACTGTGGCAGCCAAAAAGAGAATGGGTGGATGAACGCTTaGAGGCTTTGCCACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RQTSRPGDNSDCGSQKENGWMNA*RLCHTS Trigger: GGATGTGTGGCAAAGCCTTCAAGCGTTCATCCACCC...ATTCTCTTTTTGGCTGCCACAGTCAGAGTTGTCCCCTGGCCTAGAGGTCTGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR GCA 90 bp | AGACCAGAGCATGTCTGTGACTGCCTCAGTTCAGAAAGGCCCGAACTGACTCCCAGTGGTAAGTGTCCATaGCTGGAGAGTAGCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPEHVCDCLSSERPELTPSGKCP*LESSGG Trigger: GCCTCCGCTACTCTCCAGGCATGGACACTTACCACT...GGGAGTCAGTTCGGGCCTTTCTGAACTGAGGCAGTCACAGACATGCTCTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGAAGCAAGCAAGAGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTGGGCTGAGGCCATCTTaGGAAGGCTCTGGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PREASKRVSLWILALAWFGLRPS*EGSGSA Trigger: TGCTGAACCAGAGCCTTCCCAAGATGGCCTCAGCCC...AAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCTTGCTTCTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGGCTCATGGGCAATGCTGCTTCCAGGAGGACTGGGATCAGGATTGGATTCATGTCCGACTTCTaGTGGAAGCGCTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AERLMGNAASRRTGIRIGFMSDF*WKRFPQ Trigger: CTGTGGGAAGCGCTTCCACCAGAAGTCGGACATGAA...TCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCCATGAGCCTCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| 3UTR CAA 72 bp | GAGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTaGCCATGTCCACGAGGGCTTTGTAGCTGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGFSVDPGSCLV*PCPRGLCSCLC Trigger: GCACAGACAGCTACAAAGCCCTCGTGGACATGGCAAAACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR GCA 90 bp | GCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTGGTTGCTGGCACTCTGGCTATaGTCTTTTGCCACAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ARTDSHISCGQRRSVAWLLALWL*SFATGI Trigger: AATTCCTGTGGCAAAAGAGCATAGCCAGAGTGCCAG...CAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CCA 90 bp | GGGATCAGGATTGGAAAGGAGAGGCTGGCCTTCAGGCGAGACACACTAAAGCAGATCTTGGGAAGGCTCTaGTTCAGCAACATCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GIRIGKERLAFRRDTLKQILGRL*FSNISR Trigger: GCGGGAGATGTTGCTGAACCAGAGCCTTCCCAAGAT...CTGCTTTAGTGTGTCTCGCCTGAAGGCCAGCCTCTCCTTTCCAATCCTGATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGCCCGAACTGACTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTCTGGCACTCTGGCTATaGTCTTTTGCCACAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RKARTDSHISCGQRRSVALALWL*SFATGI Trigger: AATTCCTGTGGCAAAAGAGCATAGCCAGAGTGCCAG...AGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAGTCAGTTCGGGCCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGAGGAGTGTGGCTTGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGGCTGAGGCCATCTTaGGAAGGCTCTGGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEEECGLVEVIQSQKKQRGLRPS*EGSGSA Trigger: TGCTGAACCAGAGCCTTCCCAAGATGGCCTCAGCCC...TCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGAGAAGCAAGCAAGAGGGTTTCTCTGTGGATCCTGGCTCTTGCCTGGTTTCCAAGCTCACAGCGTaGCCAAAGGTTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRSKQEGFSVDPGSCLVSKLTA*PKVLPQ Trigger: CTGTGGCAAAACCTTTGGCCACGCTGTGAGCTTGGA...AACCAGGCAAGAGCCAGGATCCACAGAGAAACCCTCTTGCTTGCTTCTCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| 3UTR CAA 72 bp | CACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTTGGTaGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HISCGQRRSVAW*RSSSLKRSREA Trigger: AGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| 3UTR CAA 72 bp | CTCCCACATCAGCTGTGGTCAGAGGAGGAGTGTGGCTaGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPHQLWSEEECG*VEVIQSQKKQR Trigger: TCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCACAGCTGATGTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATGCTGCTCTCCCGCTCCTGTTTaGTTGTGTTCCAGTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLRSSSLKRSREAHGQCCSPAPV*LCSSPR Trigger: CCTTGGACTGGAACACAATCAAACAGGAGCGGGAGA...GCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR TCA 90 bp | CGCCAGACCTCTAGGCCAGGGGACAACTCTGACTGTGGCAGCCAAAAAGAGAATACACCTTGTTGCACTTaGCACAGTGGTAAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQTSRPGDNSDCGSQKENTPCCT*HSGKCP Trigger: TGGACACTTACCACTGTGTCAAGTGCAACAAGGTGT...ATTCTCTTTTTGGCTGCCACAGTCAGAGTTGTCCCCTGGCCTAGAGGTCTGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGTCAGAGGAGGAGTGTGGCTTGGTTGAGGTCATCCAGTCTCAAAAGAAGTTCATGTCCGACTTCTaGTGGAAGCGCTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LWSEEECGLVEVIQSQKKFMSDF*WKRFPQ Trigger: CTGTGGGAAGCGCTTCCACCAGAAGTCGGACATGAA...CTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCTTGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAACACCTTGTTGCACTTaGCACAGTGGTAAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLVEVIQSQKKQRGSWATPCCT*HSGKCP Trigger: TGGACACTTACCACTGTGTCAAGTGCAACAAGGTGT...TGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CCA 90 bp | CATCCGGCACTCGAAGCTTCGCTCCTGCCGGAGGAAACGAGGCCCTaGGGGGTCAGGTGCAGGTGGGGCCTCAAGGCCCGGGACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HPALEASLLPEETRP*GVRCRWGLKARDSQ Trigger: TTGGCTGTCCCGGGCCTTGAGGCCCCACCTGCACCTGACCCCCCAGGGCCTCGTTTCCTCCGGCAGGAGCGAAGCTTCGAGTGCCGGATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164290.8 |
||
| CDS GCA 90 bp | GGAGGCGGAAGTCCAAGGGAGACTCTGTGCTGGGCACGAGGGGGCTaGCGTACAGCCTCACGGAGCGCTCCAGGAAGGCGGACTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GGGSPRETLCWARGG*RTASRSAPGRRTAW Trigger: CCATGCAGTCCGCCTTCCTGGAGCGCTCCGTGAGGCTGTACGGCAGCCCCCTCGTGCCCAGCACAGAGTCTCCCTTGGACTTCCGCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CCA 90 bp | TGCCTGGAGAGTAGCGGAGGCGGAAGTCCAAGGGAGACTCTGTGCTaGGCACGAGGGGGCTGCCGTACAGCCTCACGGAGCGCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLESSGGGSPRETLC*ARGGCRTASRSAPG Trigger: TCCTGGAGCGCTCCGTGAGGCTGTACGGCAGCCCCCTCGTGCCCAGCACAGAGTCTCCCTTGGACTTCCGCCTCCGCTACTCTCCAGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CCA 90 bp | GGCTGCCGTACAGCCTCACGGAGCGCTCCAGGAAGGCGGACTGCATaGTGGAGGGGGTCTGTGTGTAGCTGTGGCTGTAGGAGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCRTASRSAPGRRTA*WRGSVCSCGCRRRP Trigger: TGGCCTCCTCCTACAGCCACAGCTACACACAGACCCCCTCCACCATGCAGTCCGCCTTCCTGGAGCGCTCCGTGAGGCTGTACGGCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CCA 90 bp | TGCCGTACAGCCTCACGGAGCGCTCCAGGAAGGCGGACTGCATGGTaGAGGGGGTCTGTGTGTAGCTGTGGCTGTAGGAGGAGGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRTASRSAPGRRTAW*RGSVCSCGCRRRPR Trigger: CCTTGGCCTCCTCCTACAGCCACAGCTACACACAGACCCCCTCCACCATGCAGTCCGCCTTCCTGGAGCGCTCCGTGAGGCTGTACGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CAA 90 bp | GTGGCTCACCTCAGGAGCCTGACTCCCAGTGGGCGGATGGATGTGGTGAGAGGTCGTCGCAGGTCCACCTaGCGCTGGAAGCCCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VAHLRSLTPSGRMDVVRGRRRST*RWKPLV Trigger: CACCAAGGGCTTCCAGCGCAAGGTGGACCTGCGACG...ACCTCTCACCACATCCATCCGCCCACTGGGAGTCAGGCTCCTGAGGTGAGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS TCA 90 bp | GTGGGCGTAGGACTGGACCCGGCTGGGACGCCCTGTGAGTGGACGTaGGTATGCTGCTCCAAGCTCACAGCGTGGCCAAAGGTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGVGLDPAGTPCEWT*VCCSKLTAWPKVLP Trigger: TGGCAAAACCTTTGGCCACGCTGTGAGCTTGGAGCAGCATACTCACGTCCACTCACAGGGCGTCCCAGCCGGGTCCAGTCCTACGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164290.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGGAGAGGCTGGCCTTCAGGCGAGACACACTAAAGCAGGCGGCCAACCGTGGGGCTGAGGCCATCTaGGGAAGGCTCTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKERLAFRRDTLKQAANRGAEAI*GRLWFS Trigger: GCTGAACCAGAGCCTTCCCAAGATGGCCTCAGCCCC...ACGGTTGGCCGCCTGCTTTAGTGTGTCTCGCCTGAAGGCCAGCCTCTCCTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CAA 90 bp | AGAGCACATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACGAACGCTTGAAGGCTTaGCCACACATCCGGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RAHLAEAEGRQTSRPGDNERLKA*PHIRHS Trigger: CGAGTGCCGGATGTGTGGCAAAGCCTTCAAGCGTTC...GTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATGTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCAATGCTGCTTCCAGGAGGACTGGGATCAGGATTGGAAAGGAGAGGCTGCGTCGCAGGTCCACCTaGCGCTGGAAGCCCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MGNAASRRTGIRIGKERLRRRST*RWKPLV Trigger: CACCAAGGGCTTCCAGCGCAAGGTGGACCTGCGACG...CAGCCTCTCCTTTCCAATCCTGATCCCAGTCCTCCTGGAAGCAGCATTGCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS CCA 90 bp | GTCACGAGAGGCCCCTCTGGGGCTGAGGCCATCTTGGGAAGGCTCTaGTTCAGCAACATCTCCCGCTCCTGTTTGATTGTGTTCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTRGPSGAEAILGRL*FSNISRSCLIVFQS Trigger: GGACTGGAACACAATCAAACAGGAGCGGGAGATGTTGCTGAACCAGAGCCTTCCCAAGATGGCCTCAGCCCCAGAGGGGCCTCTCGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCACATCTGGCCGAAGCAGAGGGGCGCCAGACCTCTAGGCCAGGGGACAACTCACTTGAGATTGTGTaGACTCTCACGGTGACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RAHLAEAEGRQTSRPGDNSLEIV*TLTVTS Trigger: CGACGTCACCGTGAGAGTCAACACAATCTCAAGTGA...GTTGTCCCCTGGCCTAGAGGTCTGGCGCCCCTCTGCTTCGGCCAGATGTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS GCA 90 bp | AAGCGGTGTGCTGAGAAGAGGGCTGGCACTCTGGCTATGCTCTTTTaGCACAGGAATTACAGCAGGAGGCCAGACCAGCTCATCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRCAEKRAGTLAMLF*HRNYSRRPDQLITL Trigger: CAGGGTGATGAGCTGGTCTGGCCTCCTGCTGTAATTCCTGTGGCAAAAGAGCATAGCCAGAGTGCCAGCCCTCTTCTCAGCACACCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS GCA 90 bp | TGGCTTGGAAGCGGTGTGCTGAGAAGAGGGCTGGCACTCTGGCTATaGTCTTTTGCCACAGGAATTACAGCAGGAGGCCAGACCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLGSGVLRRGLALWL*SFATGITAGGQTSS Trigger: TGAGCTGGTCTGGCCTCCTGCTGTAATTCCTGTGGCAAAAGAGCATAGCCAGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS CCA 90 bp | AAGGTCTGGCTTGGAAGCGGTGTGCTGAGAAGAGGGCTGGCACTCTaGCTATGCTCTTTTGCCACAGGAATTACAGCAGGAGGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KVWLGSGVLRRGLAL*LCSFATGITAGGQT Trigger: GGTCTGGCCTCCTGCTGTAATTCCTGTGGCAAAAGAGCATAGCCAGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAAGCCAGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS CCA 90 bp | CATCTCCCGCTCCTGTTTGATTGTGTTCCAGTCCAAGGTCTGGCTTaGAAGCGGTGTGCTGAGAAGAGGGCTGGCACTCTGGCTATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLPLLFDCVPVQGLA*KRCAEKRAGTLAML Trigger: GAGCATAGCCAGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAAGCCAGACCTTGGACTGGAACACAATCAAACAGGAGCGGGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS CCA 90 bp | GGAGAACACCTTGTTGCACTTGACACAGTGGTAAGTGTCCATGCCTaGAGAGTAGCGGAGGCGGAAGTCCAAGGGAGACTCTGTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEHLVALDTVVSVHA*RVAEAEVQGRLCAG Trigger: CCCAGCACAGAGTCTCCCTTGGACTTCCGCCTCCGCTACTCTCCAGGCATGGACACTTACCACTGTGTCAAGTGCAACAAGGTGTTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAATGCTGCGGGGCTGAGGCCATCTaGGGAAGGCTCTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLRSSSLKRSREAHGQCCGAEAI*GRLWFS Trigger: GCTGAACCAGAGCCTTCCCAAGATGGCCTCAGCCCC...GCAGCATTGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS CCA 90 bp | AGCAACATCTCCCGCTCCTGTTTGATTGTGTTCCAGTCCAAGGTCTaGCTTGGAAGCGGTGTGCTGAGAAGAGGGCTGGCACTCTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SNISRSCLIVFQSKV*LGSGVLRRGLALWL Trigger: TAGCCAGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAAGCCAGACCTTGGACTGGAACACAATCAAACAGGAGCGGGAGATGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS CCA 90 bp | TGTAGCTGTGGCTGTAGGAGGAGGCCAAGGTATCCCAGGAGAAGCTaGGCTTGTAGAAAGGGGGTGACTCAGAGAGTGGTGATTCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSCGCRRRPRYPRRS*ACRKGVTQRVVIPH Trigger: ATGGGGAATCACCACTCTCTGAGTCACCCCCTTTCTACAAGCCCAGCTTCTCCTGGGATACCTTGGCCTCCTCCTACAGCCACAGCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCAGAGGAGGAGTGTGGCTTGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGTTGCGCTGGAAGCCCTaGGTGCACAGCTCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSEEECGLVEVIQSQKKQLRWKP*VHSSQL Trigger: CAGCTGTGAGCTGTGCACCAAGGGCTTCCAGCGCAA...CTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACACTCCTCCTCTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCTTGGTTGAGGTCATCCAGTCTCAAAAGAAGCAGAGAGGCTCATGGGCAGAACGCTTGAAGGCTTaGCCACACATCCGGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: CGLVEVIQSQKKQRGSWAERLKA*PHIRHS Trigger: CGAGTGCCGGATGTGTGGCAAAGCCTTCAAGCGTTC...TGCCCATGAGCCTCTCTGCTTCTTTTGAGACTGGATGACCTCAACCAAGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCAGCCAAAAAGAGAATCCCTAAAAATTCAGTCACTAGACCCAGAGAAGTCACTTGAGATTGTGTaGACTCTCACGGTGACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LWQPKRESLKIQSLDPEKSLEIV*TLTVTS Trigger: CGACGTCACCGTGAGAGTCAACACAATCTCAAGTGA...CTTCTCTGGGTCTAGTGACTGAATTTTTAGGGATTCTCTTTTTGGCTGCCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS GCA 72 bp | GAGAGTAGCGGAGGCGGAAGTCCAAGGGAGACTCTGTaGTGGGCACGAGGGGGCTGCCGTACAGCCTCACGG | + |
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Preference number: 6 (lower is better) Translates to: ESSGGGSPRETL*WARGGCRTASR Trigger: CCGTGAGGCTGTACGGCAGCCCCCTCGTGCCCAGCACAGAGTCTCCCTTGGACTTCCGCCTCCGCTACTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS TCA 72 bp | GGTGGGCGTAGGACTGGACCCGGCTGGGACGCCCTGTaGGTGGACGTGAGTATGCTGCTCCAAGCTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: GGRRTGPGWDAL*VDVSMLLQAHS Trigger: GCTGTGAGCTTGGAGCAGCATACTCACGTCCACTCACAGGGCGTCCCAGCCGGGTCCAGTCCTACGCCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164290.8 |
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| CDS CCA 72 bp | GCCTCACGGAGCGCTCCAGGAAGGCGGACTGCATGGTaGAGGGGGTCTGTGTGTAGCTGTGGCTGTAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASRSAPGRRTAW*RGSVCSCGCRR Trigger: CCTCCTACAGCCACAGCTACACACAGACCCCCTCCACCATGCAGTCCGCCTTCCTGGAGCGCTCCGTGAGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS TCA 72 bp | GGACTGGACCCGGCTGGGACGCCCTGTGAGTGGACGTaGGTATGCTGCTCCAAGCTCACAGCGTGGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GLDPAGTPCEWT*VCCSKLTAWPK Trigger: CTTTGGCCACGCTGTGAGCTTGGAGCAGCATACTCACGTCCACTCACAGGGCGTCCCAGCCGGGTCCAGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164290.8 |
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| CDS CCA 72 bp | ACAGCCTCACGGAGCGCTCCAGGAAGGCGGACTGCATaGTGGAGGGGGTCTGTGTGTAGCTGTGGCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: TASRSAPGRRTA*WRGSVCSCGCR Trigger: CCTACAGCCACAGCTACACACAGACCCCCTCCACCATGCAGTCCGCCTTCCTGGAGCGCTCCGTGAGGCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CAA 72 bp | GGTGTCACGAGAGGCCCCTCTGGGGCTGAGGCCATCTaGGGAAGGCTCTGGTTCAGCAACATCTCCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GVTRGPSGAEAI*GRLWFSNISRS Trigger: GGAGCGGGAGATGTTGCTGAACCAGAGCCTTCCCAAGATGGCCTCAGCCCCAGAGGGGCCTCTCGTGACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CCA 72 bp | GTGTCACGAGAGGCCCCTCTGGGGCTGAGGCCATCTTaGGAAGGCTCTGGTTCAGCAACATCTCCCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSREAPLGLRPS*EGSGSATSPAP Trigger: AGGAGCGGGAGATGTTGCTGAACCAGAGCCTTCCCAAGATGGCCTCAGCCCCAGAGGGGCCTCTCGTGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CAA 72 bp | AGGTGGGTGGACAGGGTGGATGAACGCTTGAAGGCTTaGCCACACATCCGGCACTCGAAGCTTCGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RWVDRVDERLKA*PHIRHSKLRSC Trigger: GCAGGAGCGAAGCTTCGAGTGCCGGATGTGTGGCAAAGCCTTCAAGCGTTCATCCACCCTGTCCACCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164290.8 |
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| CDS TCA 72 bp | ATCCGGCACTCGAAGCTTCGCTCCTGTGAGTGGACGTaGGTATGCTGCTCCAAGCTCACAGCGTGGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: IRHSKLRSCEWT*VCCSKLTAWPK Trigger: CTTTGGCCACGCTGTGAGCTTGGAGCAGCATACTCACGTCCACTCACAGGAGCGAAGCTTCGAGTGCCGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028156.8 |
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| CDS CCA 72 bp | GGCTGTAGGAGGAGGCCAAGGTATCCCAGGAGAAGCTaGGCTTGTAGAAAGGGGGTGACTCAGAGAGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GCRRRPRYPRRS*ACRKGVTQRVV Trigger: CACCACTCTCTGAGTCACCCCCTTTCTACAAGCCCAGCTTCTCCTGGGATACCTTGGCCTCCTCCTACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CAA 72 bp | AGGTGGGTGGACAGGGTGGATGAACGCTTGAAGGCTTaGCCACACATCCGGCACTCGAAGCTTCGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RWVDRVDERLKA*PHIRHSKLRSC Trigger: ACAGGAGCGAAGCTTCGAGTGCCGGATGTGTGGCAAAGCCTTCAAGCGTTCATCCACCCTGTCCACCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028156.8 |
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| CDS TCA 72 bp | TTTGCCACACATCCGGCACTCGAAGCTTCGCTCCTGTaGGTGGACGTGAGTATGCTGCTCCAAGCTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: FATHPALEASLL*VDVSMLLQAHS Trigger: GCTGTGAGCTTGGAGCAGCATACTCACGTCCACTCACAGGAGCGAAGCTTCGAGTGCCGGATGTGTGGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028156.8 |
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| CDS GCA 72 bp | AATTACAGCAGGAGGCCAGACCAGCTCATCACCCTGTaGCCGGGGCTGGTGGTAAGTGTGTGCCTTCTTACT | + |
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Preference number: 6 (lower is better) Translates to: NYSRRPDQLITL*PGLVVSVCLLT Trigger: AGTAAGAAGGCACACACTTACCACCAGCCCCGGGCACAGGGTGATGAGCTGGTCTGGCCTCCTGCTGTAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS TCA 72 bp | TGTTCCAGTCCAAGGTCTGGCTTGGAAGCGGTGTGCTaGGAAGAGGGCTGGCACTCTGGCTATGCTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CSSPRSGLEAVC*EEGWHSGYALL Trigger: CAAAAGAGCATAGCCAGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAAGCCAGACCTTGGACTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CCA 72 bp | CTCCTGTTTGATTGTGTTCCAGTCCAAGGTCTGGCTTaGAAGCGGTGTGCTGAGAAGAGGGCTGGCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLFDCVPVQGLA*KRCAEKRAGTL Trigger: CAGAGTGCCAGCCCTCTTCTCAGCACACCGCTTCCAAGCCAGACCTTGGACTGGAACACAATCAAACAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS CCA 72 bp | CTTGTTGCACTTGACACAGTGGTAAGTGTCCATGCCTaGAGAGTAGCGGAGGCGGAAGTCCAAGGGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: LVALDTVVSVHA*RVAEAEVQGRL Trigger: GAGTCTCCCTTGGACTTCCGCCTCCGCTACTCTCCAGGCATGGACACTTACCACTGTGTCAAGTGCAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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| CDS TCA 72 bp | CTAGCCCATGAGGGGTGGAGAACACCTTGTTGCACTTaGCACAGTGGTAAGTGTCCATGCCTGGAGAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LAHEGWRTPCCT*HSGKCPCLESS Trigger: GCTACTCTCCAGGCATGGACACTTACCACTGTGTCAAGTGCAACAAGGTGTTCTCCACCCCTCATGGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028156.8 ENSMUST00000164290.8 |
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