Pregenerated sensors for GFI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029275Ensembl transcript IDs: ENSMUST00000031205.16, ENSMUST00000065478.12, ENSMUST00000159164.9, ENSMUST00000159263.3
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCTCCGGGAAGGAAGGTGAAGGGGACTAACCATGATGAGCTTTaGACACTGGACTCAGGGCCTGAGAAGGGGCTGGAGGGAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: AAPGRKVKGTNHDEL*TLDSGPEKGLEGGR Trigger: CCTGCCTCCCTCCAGCCCCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR CCA 90 bp | AGCCCAAAGCACAGACGACTGCTGCTGCTGCTGCGGTTCCCACTCTaGGTTGACCTTAGAAACGGGAGTTCATCTCCTCCAGCAGCTCCG | + |
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Preference number: 1 (lower is better) Translates to: SPKHRRLLLLLRFPL*VDLRNGSSSPPAAP Trigger: CGGAGCTGCTGGAGGAGATGAACTCCCGTTTCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTGCTTTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR TCA 90 bp | AGCTGCTCCACAGCTTCACCTCCTCTGATGGCACCACAGGACCTCTaGCTCCCTCTCATCACCAAGTCCCCTTCTTCTCGTGGCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SCSTASPPLMAPQDL*LPLITKSPSSRGRL Trigger: AAGCCTGCCACGAGAAGAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGAGGTGAAGCTGTGGAGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR CCA 90 bp | ACCATGATGAGCTTTGCACACTGGACTCAGGGCCTGAGAAGGGGCTaGAGGGAGGCAGGGAAGACATCCCTCACGGTAGTGTTACACAGC | + |
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Preference number: 1 (lower is better) Translates to: TMMSFAHWTQGLRRG*REAGKTSLTVVLHS Trigger: GCTGTGTAACACTACCGTGAGGGATGTCTTCCCTGCCTCCCTCCAGCCCCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCATCATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR GCA 90 bp | TTCAGCTGTAGGGAAGCCCAAAGCACAGACGACTGCTGCTGCTGCTaGGGTTCCCACTCTGGGTTGACCTTAGAAACGGGAGTTCATCTC | + |
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Preference number: 1 (lower is better) Translates to: FSCREAQSTDDCCCC*GSHSGLTLETGVHL Trigger: GAGATGAACTCCCGTTTCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTGCTTTGGGCTTCCCTACAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR CCA 90 bp | CTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTaGCCTTCTTCAGAACTCCCTTGGAAGCACAGAACACAGGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: LEKLRKCQKEVPMFV*PSSELPWKHRTQAL Trigger: TAGAGCCTGTGTTCTGTGCTTCCAAGGGAGTTCTGAAGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGATGGCACCACAGGACCTCTGACTCCCTCTCATCACCAAGTCCCCTTCGACTGCTGCTGCTGCTaGGGTTCCCACTCTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SSDGTTGPLTPSHHQVPFDCCCC*GSHSGL Trigger: CAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTC...GAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTTCCCTAAACCAGAGTCTGGTGGAGGATAAAGGAGTCAGCAGTCTCCCCGACTGCTGCTGCTGCTaGGGTTCCCACTCTGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: VPSLNQSLVEDKGVSSLPDCCCC*GSHSGL Trigger: CAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTC...GGGGAGACTGCTGACTCCTTTATCCTCCACCAGACTCTGGTTTAGGGAAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCGACGACTGCTGCTGCTaGTGCGGTTCCCACTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLVAGLMVHLMISKERGSDDCCC*CGSHSG Trigger: CCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTC...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGGACGACTGCTGCTGCTaGTGCGGTTCCCACTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PSSRGRLDGASDDFKGTRDDCCC*CGSHSG Trigger: CCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTC...CCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAGACGACTGCTGCTGCTGCTGCGGTTCCCACTCTGGGTTGACCTTAGAATGAGCTTTGCACACTaGACTCAGGGCCTGAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KHRRLLLLLRFPLWVDLRMSFAH*TQGLRR Trigger: CCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCAT...TCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTGTGGCCTTCTTCAGAACTCCCTTGGAAGCACAGAACACAGGCTCTAGCGCACCACAGGACCTCTaGCTCCCTCTCATCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: VCVAFFRTPLEAQNTGSSAPQDL*LPLITK Trigger: CTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGC...GCTAGAGCCTGTGTTCTGTGCTTCCAAGGGAGTTCTGAAGAAGGCCACACAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR TCA 90 bp | ATAGCCTTCACCCCACATCTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACCTCCGGGAAGGAAGGTaGAGGGGACTAACCATGATG | + |
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Preference number: 2 (lower is better) Translates to: IAFTPHLPAQASNKVPPNLREGR*RGLTMM Trigger: CATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAG...GTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGAAGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR TCA 90 bp | GGGTTAGGGCCTATGACTTTAATCTCTGGCTCTCCCATACCTAGCACAGTTCCTGCACCACAGGACCTCTaGCTCCCTCTCATCACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GLGPMTLISGSPIPSTVPAPQDL*LPLITK Trigger: CTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGC...AGGAACTGTGCTAGGTATGGGAGAGCCAGAGATTAAAGTCATAGGCCCTAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR CAA 90 bp | TCTGACTCCCTCTCATCACCAAGTCCCCTTCTTCTCGTGGCAGGCTaGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SDSLSSPSPLLLVAG*MVHLMISKERGSFP Trigger: AGGGAAGGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAGAAGGGGACTTGGTGATGAGAGGGAGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCATGAGCTTTGCACACTaGACTCAGGGCCTGAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLVAGLMVHLMISKERGSMSFAH*TQGLRR Trigger: CCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCAT...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACCTCCGGGAAGGAAGGTaGAGGGGACTAACCATGATG | + |
|
Preference number: 2 (lower is better) Translates to: LPAQASNKVPPNNKSWIYLREGR*RGLTMM Trigger: CATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAG...GTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACATGAGCTTTGCACACTaGACTCAGGGCCTGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LPAQASNKVPPNNKSWIYMSFAH*TQGLRR Trigger: CCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCAT...GTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTCATTCGTTCTCAATAAATGCATCAGTGGCGCTCAAAGCTTAAGAGGTGATCTCCGGGAAGGAAGGTaGAGGGGACTAACCATGATG | + |
|
Preference number: 2 (lower is better) Translates to: CSFVLNKCISGAQSLRGDLREGR*RGLTMM Trigger: CATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAG...ATCACCTCTTAAGCTTTGAGCGCCACTGATGCATTTATTGAGAACGAATGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCATACCTAGCACAGTTCCTTACTCTGATAACCTGCGGCCAATAATCACTGCCCAGAGTTCATTCTaGCCTGTGAGACAGCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SPIPSTVPYSDNLRPIITAQSSF*PVRQQK Trigger: TTTTTGCTGTCTCACAGGCCAGAATGAACTCTGGGC...AGTGATTATTGGCCGCAGGTTATCAGAGTAAGGAACTGTGCTAGGTATGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGTGGAGGATAAAGGAGTCAGCAGTCTCCCCAGAAGAGAAAATTAATGTTGCCCAGAGTTCATTCTaGCCTGTGAGACAGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: VWWRIKESAVSPEEKINVAQSSF*PVRQQK Trigger: TTTTTGCTGTCTCACAGGCCAGAATGAACTCTGGGC...AACATTAATTTTCTCTTCTGGGGAGACTGCTGACTCCTTTATCCTCCACCAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR CAA 90 bp | TTACACTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTaGTGTGGCCTTCTTCAGAACTCCCTTGGAAGCACAGAACACAGG | + |
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Preference number: 2 (lower is better) Translates to: LHLKNSVSVKKKSQC*CGLLQNSLGSTEHR Trigger: CCTGTGTTCTGTGCTTCCAAGGGAGTTCTGAAGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAGTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR GCA 90 bp | TGTTCATTCGTTCTCAATAAATGCATCAGTGGCGCTCAAAGCTTAAGAGGTGATGGAAGAACTGGGAGGTaGAAGATCTCATTTGATCCC | + |
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Preference number: 2 (lower is better) Translates to: CSFVLNKCISGAQSLRGDGRTGR*KISFDP Trigger: GGGATCAAATGAGATCTTGCACCTCCCAGTTCTTCC...ATCACCTCTTAAGCTTTGAGCGCCACTGATGCATTTATTGAGAACGAATGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR GCA 72 bp | GGAAGGAAGGTGAAGGGGACTAACCATGATGAGCTTTaGACACTGGACTCAGGGCCTGAGAAGGGGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GRKVKGTNHDEL*TLDSGPEKGLE Trigger: CTCCAGCCCCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCATCATGGTTAGTCCCCTTCACCTTCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR GCA 72 bp | TGTAGGGAAGCCCAAAGCACAGACGACTGCTGCTGCTaGTGCGGTTCCCACTCTGGGTTGACCTTAGAAACG | + |
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Preference number: 3 (lower is better) Translates to: CREAQSTDDCCC*CGSHSGLTLET Trigger: CGTTTCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTGCTTTGGGCTTCCCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR GCA 72 bp | TTCAGCTGTAGGGAAGCCCAAAGCACAGACGACTGCTaGTGCTGCTGCGGTTCCCACTCTGGGTTGACCTTA | + |
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Preference number: 3 (lower is better) Translates to: FSCREAQSTDDC*CCCGSHSGLTL Trigger: TAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTGCTTTGGGCTTCCCTACAGCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR CCA 72 bp | CACAGACGACTGCTGCTGCTGCTGCGGTTCCCACTCTaGGTTGACCTTAGAAACGGGAGTTCATCTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: HRRLLLLLRFPL*VDLRNGSSSPP Trigger: TGGAGGAGATGAACTCCCGTTTCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR TCA 72 bp | ACAGCTTCACCTCCTCTGATGGCACCACAGGACCTCTaGCTCCCTCTCATCACCAAGTCCCCTTCTTCTCGT | + |
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Preference number: 3 (lower is better) Translates to: TASPPLMAPQDL*LPLITKSPSSR Trigger: ACGAGAAGAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGAGGTGAAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CAA 90 bp | ATAGCCTTCACCCCACATCTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACGGTGCAAGATCTCATTaGATCCCCATCTTCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: IAFTPHLPAQASNKVPPNGARSH*IPIFSC Trigger: ACAGCTGAAGATGGGGATCAAATGAGATCTTGCACC...GTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGAAGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR GCA 72 bp | CAAAGCTTAAGAGGTGATGCCTCCTCTTGTAGCAGCTaGCCAGAGTTCATTCTGGCCTGTGAGACAGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: QSLRGDASSCSS*PEFILACETAK Trigger: TTTTGCTGTCTCACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCACCTCTTAAGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTTCTTCAGAACTCCCTaGGAAGCACAGAACACAGGC | + |
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Preference number: 3 (lower is better) Translates to: LPAQASNKVPPNNKSWIYFFRTP*EAQNTG Trigger: GCCTGTGTTCTGTGCTTCCAAGGGAGTTCTGAAGAA...GTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CAA 90 bp | ATAGCCTTCACCCCACATCTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACCCTATTTGTTTACACTaGAAAAACTCCGTAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: IAFTPHLPAQASNKVPPNPICLH*KNSVSV Trigger: GACACTTACGGAGTTTTTCAAGTGTAAACAAATAGG...GTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGAAGGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTCATAAGAAGTCCCAATGTTaGTGTGGCCTTCTTCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: QRRHLIKSHLTIKAGFTHKKSQC*CGLLQN Trigger: GTTCTGAAGAAGGCCACACAAACATTGGGACTTCTT...ATGAGTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR GCA 90 bp | GCAGCTCCGGGAAGGAAGGTGAAGGGGACTAACCATGATGAGCTTTGCACACTGCACAGCGCCGCCCTCTaGTCTGCCCGGCGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AAPGRKVKGTNHDELCTLHSAAL*SARRRH Trigger: GTGCCTGCGCCGGGCAGAGCAGAGGGCGGCGCTGTG...CAGTGTGCAAAGCTCATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR GCA 90 bp | CTCTGGGTTGACCTTAGAAACGGGAGTTCATCTCCTCCAGCAGCTCCGGGAAGGTGGGACCGGCGCACGTaGACCTCCAGCCCGTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LWVDLRNGSSSPPAAPGRWDRRT*TSSPCG Trigger: ACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCA...CCTTCCCGGAGCTGCTGGAGGAGATGAACTCCCGTTTCTAAGGTCAACCCAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR GCA 90 bp | GTTCCTTCCCTAAACCAGAGTCTGGTGGAGGATAAAGGAGTCAGCAGTCTCCCCCACAGCGCCGCCCTCTaGTCTGCCCGGCGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VPSLNQSLVEDKGVSSLPHSAAL*SARRRH Trigger: GTGCCTGCGCCGGGCAGAGCAGAGGGCGGCGCTGTG...GGGGAGACTGCTGACTCCTTTATCCTCCACCAGACTCTGGTTTAGGGAAGGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR GCA 90 bp | TTAAGAGGTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTCACAGCGCCGCCCTCTaGTCTGCCCGGCGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LRGDASSCSSCPEFILACHSAAL*SARRRH Trigger: GTGCCTGCGCCGGGCAGAGCAGAGGGCGGCGCTGTG...ACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCACCTCTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CCA 90 bp | GCAGCTCCGGGAAGGAAGGTGAAGGGGACTAACCATGATGAGCTTTGCACACTGTGCCTTCGCAGCTGTTaGGGGACGCGGAGGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: AAPGRKVKGTNHDELCTLCLRSC*GTRRPC Trigger: ACAGGGCCTCCGCGTCCCCCAACAGCTGCGAAGGCA...CAGTGTGCAAAGCTCATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CCA 90 bp | ACTAACCATGATGAGCTTTGCACACTGGACTCAGGGCCTGAGAAGGGGCTGGAGTGCCTTCGCAGCTGTTaGGGGACGCGGAGGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TNHDELCTLDSGPEKGLECLRSC*GTRRPC Trigger: ACAGGGCCTCCGCGTCCCCCAACAGCTGCGAAGGCA...CTCCAGCCCCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCATCATGGTTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR TCA 90 bp | GTTCCTTCCCTAAACCAGAGTCTGGTGGAGGATAAAGGAGTCAGCAGTCTCCCCGCTCCGACTCCACCTTaGCGCCCACGCTCTTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: VPSLNQSLVEDKGVSSLPAPTPP*RPRSCP Trigger: CGGACAAGAGCGTGGGCGTCAAGGTGGAGTCGGAGC...GGGGAGACTGCTGACTCCTTTATCCTCCACCAGACTCTGGTTTAGGGAAGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR GCA 90 bp | TCCTCTGATGGCACCACAGGACCTCTGACTCCCTCTCATCACCAAGTCCCCTTCCGTGCCCGAAGGTCTTaGCGCACATCTCGCACGCAA | + |
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Preference number: 4 (lower is better) Translates to: SSDGTTGPLTPSHHQVPFRARRS*RTSRTQ Trigger: TTGCGTGCGAGATGTGCGGCAAGACCTTCGGGCACG...GAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CCA 90 bp | GGAGGTGCAAGATCTCATTTGATCCCCATCTTCAGCTGTAGGGAAGCCCAAAGCGGTCTTGTGCCGCTGTaGGACCGGCGCACGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: GGARSHLIPIFSCREAQSGLVPL*DRRTCT Trigger: GGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACC...GCTTTGGGCTTCCCTACAGCTGAAGATGGGGATCAAATGAGATCTTGCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CCA 90 bp | GTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTGAGACAGGGAATGAGCGCGGCATaGTGGTCAGCCGCTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: VMPPLVAAAQSSFWPVRQGMSAA*WSAAGR Trigger: TCGTCCAGCGGCTGACCACCATGCCGCGCTCATTCC...CTGTCTCACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065478.12 |
||
| CDS-3UTR TCA 90 bp | ATAGCCTTCACCCCACATCTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACGCTCCGACTCCACCTTaGCGCCCACGCTCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IAFTPHLPAQASNKVPPNAPTPP*RPRSCP Trigger: CGGACAAGAGCGTGGGCGTCAAGGTGGAGTCGGAGC...GTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGAAGGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACAGACGACTGCTGCTGCTGCTGCGGTTCCCACTCTGGGTTGACCTTAGAGGGTGTCCGAGTGAATaGGCAGATGTGTGGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KHRRLLLLLRFPLWVDLRGCPSE*ADVWTA Trigger: CGCTGTCCACACATCTGCTCATTCACTCGGACACCC...TCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGTTGACCTTAGAAACGGGAGTTCATCTCCTCCAGCAGCTCCGGGAAGGTACTCTGAGTTCTCGTaGTGCAGCTGGCGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWVDLRNGSSSPPAAPGRYSEFS*CSWRPG Trigger: CCCTGGACGCCAGCTGCAGCACGAGAACTCAGAGTA...CCTTCCCGGAGCTGCTGGAGGAGATGAACTCCCGTTTCTAAGGTCAACCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065478.12 |
||
| CDS-3UTR CCA 90 bp | TTAAGAGGTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTTGCCTTCGCAGCTGTTaGGGGACGCGGAGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGDASSCSSCPEFILACCLRSC*GTRRPC Trigger: ACAGGGCCTCCGCGTCCCCCAACAGCTGCGAAGGCA...ACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCACCTCTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGTTGACCTTAGAAACGGGAGTTCATCTCCTCCAGCAGCTCCGGGAAGGCCGCCAGGCTTCCCCTaGTCATCTGAGGCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LWVDLRNGSSSPPAAPGRPPGFP*SSEAGN Trigger: ATTTCCAGCCTCAGATGACCAGGGGAAGCCTGGCGG...CCTTCCCGGAGCTGCTGGAGGAGATGAACTCCCGTTTCTAAGGTCAACCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065478.12 |
||
| 3UTR CAA 72 bp | GACGACTGCTGCTGCTGCTGCGGTTCCCACTCTGGGTaGACCTTAGAAACGGGAGTTCATCTCCTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DDCCCCCGSHSG*TLETGVHLLQQ Trigger: CTGCTGGAGGAGATGAACTCCCGTTTCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | GTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTGAGACAGGGGTGTCCGAGTGAATaGGCAGATGTGTGGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VMPPLVAAAQSSFWPVRQGCPSE*ADVWTA Trigger: CGCTGTCCACACATCTGCTCATTCACTCGGACACCC...CTGTCTCACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGATGGCACCACAGGACCTCTGACTCCCTCTCATCACCAAGTCCCCTTCCACAGCCAAAGGGCTTaGAGCCTGTGTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDGTTGPLTPSHHQVPFHSQRA*SLCAFC Trigger: GCAGAAAGCACACAGGCTTCAAGCCCTTTGGCTGTG...GAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGAGGTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTACGCAAAGGGTCTTGTaGCGCTGTGGGACCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGDASSCSSCPEFILACTQRVL*RCGTGA Trigger: TGCGCCGGTCCCACAGCGGCACAAGACCCTTTGCGT...ACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCACCTCTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTCCCTAAACCAGAGTCTGGTGGAGGATAAAGGAGTCAGCAGTCTCCCCTGCACTGCCTTGTGTTaGTCCAGGCTCACCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSLNQSLVEDKGVSSLPCTALC*SRLTAC Trigger: GCACGCGGTGAGCCTGGAGCAACACAAGGCAGTGCA...GGGGAGACTGCTGACTCCTTTATCCTCCACCAGACTCTGGTTTAGGGAAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | ACTAACCATGATGAGCTTTGCACACTGGACTCAGGGCCTGAGAAGGGGCTGGAGCTGCGTTCCTGGGAGTaGACTGCCTTGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNHDELCTLDSGPEKGLELRSWE*TALCCS Trigger: GGAGCAACACAAGGCAGTGCACTCCCAGGAACGCAG...CTCCAGCCCCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCATCATGGTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | GGGTTAGGGCCTATGACTTTAATCTCTGGCTCTCCCATACCTAGCACAGTTCCTGGAGCCTCGGTAAGCTaGGAGTCGGGGGACAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGPMTLISGSPIPSTVPGASVS*ESGDKR Trigger: GCGTTTGTCCCCCGACTCTCAGCTTACCGAGGCTCC...AGGAACTGTGCTAGGTATGGGAGAGCCAGAGATTAAAGTCATAGGCCCTAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGTTGACCTTAGAAACGGGAGTTCATCTCCTCCAGCAGCTCCGGGAAGGGCGTGGATGACCTCTTaGAGCTCTTGCCACAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVDLRNGSSSPPAAPGRAWMTS*SSCHRS Trigger: AGATCTGTGGCAAGAGCTTCAAGAGGTCATCCACGC...CCTTCCCGGAGCTGCTGGAGGAGATGAACTCCCGTTTCTAAGGTCAACCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | ACTAACCATGATGAGCTTTGCACACTGGACTCAGGGCCTGAGAAGGGGCTGGAGTGTGGACAGCGTGGATaGCCTCTTGAAGCTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNHDELCTLDSGPEKGLECGQRG*PLEALA Trigger: GGCAAGAGCTTCAAGAGGTCATCCACGCTGTCCACA...CTCCAGCCCCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCATCATGGTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGCAAGATCTCATTTGATCCCCATCTTCAGCTGTAGGGAAGCCCAAAGCTGCACCTCCAGCCCGTaGGGTGTGGAGAACACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGARSHLIPIFSCREAQSCTSSP*GVENTL Trigger: CAAGGTGTTCTCCACACCGCACGGGCTGGAGGTGCA...GCTTTGGGCTTCCCTACAGCTGAAGATGGGGATCAAATGAGATCTTGCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTGGGACCGGCGCACGTaGACCTCCAGCCCGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPAQASNKVPPNNKSWIYWDRRT*TSSPCG Trigger: ACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCA...GTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGCAAGATCTCATTTGATCCCCATCTTCAGCTGTAGGGAAGCCCAAAGCCGTGCCCGAAGGTCTTaGCGCACATCTCGCACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGARSHLIPIFSCREAQSRARRS*RTSRTQ Trigger: TTGCGTGCGAGATGTGCGGCAAGACCTTCGGGCACG...GCTTTGGGCTTCCCTACAGCTGAAGATGGGGATCAAATGAGATCTTGCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGAGGTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTTGCACTGCCTTGTGTTaGTCCAGGCTCACCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGDASSCSSCPEFILACCTALC*SRLTAC Trigger: GCACGCGGTGAGCCTGGAGCAACACAAGGCAGTGCA...ACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCACCTCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCATACCTAGCACAGTTCCTTACTCTGATAACCTGCGGCCAATAATCACTGGTCTTGTGCCGCTGTaGGACCGGCGCACGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SPIPSTVPYSDNLRPIITGLVPL*DRRTCT Trigger: GGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACC...AGTGATTATTGGCCGCAGGTTATCAGAGTAAGGAACTGTGCTAGGTATGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCATTCGTTCTCAATAAATGCATCAGTGGCGCTCAAAGCTTAAGAGGTGATGGCTCAGGCCCGCGCTaGGCTCCAGCGCGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CSFVLNKCISGAQSLRGDGSGPR*APARCT Trigger: AGTGCAGCGCGCTGGAGCGCAGCGCGGGCCTGAGCC...ATCACCTCTTAAGCTTTGAGCGCCACTGATGCATTTATTGAGAACGAATGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTCATGGCTCAGGCCCGCGCTaGGCTCCAGCGCGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QRRHLIKSHLTIKAGFTHGSGPR*APARCT Trigger: AGTGCAGCGCGCTGGAGCGCAGCGCGGGCCTGAGCC...ATGAGTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTAGGGCCTATGACTTTAATCTCTGGCTCTCCCATACCTAGCACAGTTCCTCCAGCAGCAGACGGGTaGAAAGCAGCTCCGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGPMTLISGSPIPSTVPPAADG*KAAPTP Trigger: TGGAGTCGGAGCTGCTTTGCACCCGTCTGCTGCTGG...AGGAACTGTGCTAGGTATGGGAGAGCCAGAGATTAAAGTCATAGGCCCTAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCCCAGCAGCAGACGGGTaGAAAGCAGCTCCGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVAGLMVHLMISKERGSPAADG*KAAPTP Trigger: TGGAGTCGGAGCTGCTTTGCACCCGTCTGCTGCTGG...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCTGCACCTCCAGCCCGTaGGGTGTGGAGAACACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVAGLMVHLMISKERGSCTSSP*GVENTL Trigger: CAAGGTGTTCTCCACACCGCACGGGCTGGAGGTGCA...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGCAAGATCTCATTTGATCCCCATCTTCAGCTGTAGGGAAGCCCAAAGCCCAGCCCGTGCGGTGTaGAGAACACCTTGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GGARSHLIPIFSCREAQSPARAV*RTPCCI Trigger: AATGCAGCAAGGTGTTCTCCACACCGCACGGGCTGG...GCTTTGGGCTTCCCTACAGCTGAAGATGGGGATCAAATGAGATCTTGCACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCCATACCTAGCACAGTTCCTTACTCTGATAACCTGCGGCCAATAATCACTGGAGCCTCGGTAAGCTaGGAGTCGGGGGACAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SPIPSTVPYSDNLRPIITGASVS*ESGDKR Trigger: GCGTTTGTCCCCCGACTCTCAGCTTACCGAGGCTCC...AGTGATTATTGGCCGCAGGTTATCAGAGTAAGGAACTGTGCTAGGTATGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGCAAGATCTCATTTGATCCCCATCTTCAGCTGTAGGGAAGCCCAAAGCCACAGCCAAAGGGCTTaGAGCCTGTGTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGARSHLIPIFSCREAQSHSQRA*SLCAFC Trigger: GCAGAAAGCACACAGGCTTCAAGCCCTTTGGCTGTG...GCTTTGGGCTTCCCTACAGCTGAAGATGGGGATCAAATGAGATCTTGCACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGCCTTCTTGGGACCGGCGCACGTaGACCTCCAGCCCGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEKLRKCQKEVPMFVWPSWDRRT*TSSPCG Trigger: ACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCA...AGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGCTGCGTTCCTGGGAGTaGACTGCCTTGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSSRGRLDGASDDFKGTRLRSWE*TALCCS Trigger: GGAGCAACACAAGGCAGTGCACTCCCAGGAACGCAG...CCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCCCAGCCCGTGCGGTGTaGAGAACACCTTGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLVAGLMVHLMISKERGSPARAV*RTPCCI Trigger: AATGCAGCAAGGTGTTCTCCACACCGCACGGGCTGG...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCTCCATGCATAGGGCTTaGAAGGCAGCGTGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVAGLMVHLMISKERGSSMHRA*KAACRA Trigger: AGCCCTACACGCTGCCTTTCAAGCCCTATGCATGGA...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | ATAGCCTTCACCCCACATCTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACGCGTGGATGACCTCTTaGAGCTCTTGCCACAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IAFTPHLPAQASNKVPPNAWMTS*SSCHRS Trigger: AGATCTGTGGCAAGAGCTTCAAGAGGTCATCCACGC...GTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGAAGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | GGGTTAGGGCCTATGACTTTAATCTCTGGCTCTCCCATACCTAGCACAGTTCCTCACAGCCAAAGGGCTTaGAGCCTGTGTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGPMTLISGSPIPSTVPHSQRA*SLCAFC Trigger: GCAGAAAGCACACAGGCTTCAAGCCCTTTGGCTGTG...AGGAACTGTGCTAGGTATGGGAGAGCCAGAGATTAAAGTCATAGGCCCTAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCCATACCTAGCACAGTTCCTTACTCTGATAACCTGCGGCCAATAATCACTCCAGCAGCAGACGGGTaGAAAGCAGCTCCGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPIPSTVPYSDNLRPIITPAADG*KAAPTP Trigger: TGGAGTCGGAGCTGCTTTGCACCCGTCTGCTGCTGG...AGTGATTATTGGCCGCAGGTTATCAGAGTAAGGAACTGTGCTAGGTATGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | TCACCCCACATCTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGGGTGTCCGAGTGAATaGGCAGATGTGTGGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPHISQRRHLIKSHLTIKGCPSE*ADVWTA Trigger: CGCTGTCCACACATCTGCTCATTCACTCGGACACCC...TTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | GTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTGAGACAGTCTGGTGGAATCTTTTaGCACAGTACTGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VMPPLVAAAQSSFWPVRQSGGIF*HSTDRD Trigger: ATCCCTGTCAGTACTGTGGCAAAAGATTCCACCAGA...CTGTCTCACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCCATACCTAGCACAGTTCCTTACTCTGATAACCTGCGGCCAATAATCACTTCCATGCATAGGGCTTaGAAGGCAGCGTGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPIPSTVPYSDNLRPIITSMHRA*KAACRA Trigger: AGCCCTACACGCTGCCTTTCAAGCCCTATGCATGGA...AGTGATTATTGGCCGCAGGTTATCAGAGTAAGGAACTGTGCTAGGTATGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCCATACCTAGCACAGTTCCTTACTCTGATAACCTGCGGCCAATAATCACTTGTGGACAGCGTGGATaGCCTCTTGAAGCTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPIPSTVPYSDNLRPIITCGQRG*PLEALA Trigger: GGCAAGAGCTTCAAGAGGTCATCCACGCTGTCCACA...AGTGATTATTGGCCGCAGGTTATCAGAGTAAGGAACTGTGCTAGGTATGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGCCTTCTACGCAAAGGGTCTTGTaGCGCTGTGGGACCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKLRKCQKEVPMFVWPSTQRVL*RCGTGA Trigger: TGCGCCGGTCCCACAGCGGCACAAGACCCTTTGCGT...AGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTAGGGCCTATGACTTTAATCTCTGGCTCTCCCATACCTAGCACAGTTCCTTCTTACAGTCAAAGCTaGGTTCCTGGGAGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGPMTLISGSPIPSTVPSYSQS*VPGSAL Trigger: CAGTGCACTCCCAGGAACGCAGCTTTGACTGTAAGA...AGGAACTGTGCTAGGTATGGGAGAGCCAGAGATTAAAGTCATAGGCCCTAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | TTTACACTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGGGTCTTGTGCCGCTGTaGGACCGGCGCACGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FTLEKLRKCQKEVPMFVWGLVPL*DRRTCT Trigger: GGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACC...CCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAGTGTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGATGGCACCACAGGACCTCTGACTCCCTCTCATCACCAAGTCCCCTTCTTCATATCTGACTTCTaGTGGAATCTTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSDGTTGPLTPSHHQVPFFISDF*WNLLPQ Trigger: CTGTGGCAAAAGATTCCACCAGAAGTCAGATATGAA...GAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTCCATGCATAGGGCTTaGAAGGCAGCGTGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPAQASNKVPPNNKSWIYSMHRA*KAACRA Trigger: AGCCCTACACGCTGCCTTTCAAGCCCTATGCATGGA...GTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACAGACGACTGCTGCTGCTGCTGCGGTTCCCACTCTGGGTTGACCTTAGAGTGTTTCTTCATATCTaGCTTCTGGTGGAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHRRLLLLLRFPLWVDLRVFLHI*LLVESF Trigger: AAAAGATTCCACCAGAAGTCAGATATGAAGAAACAC...TCTAAGGTCAACCCAGAGTGGGAACCGCAGCAGCAGCAGCAGTCGTCTGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGCCTTCTTGCACCTCCAGCCCGTaGGGTGTGGAGAACACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKLRKCQKEVPMFVWPSCTSSP*GVENTL Trigger: CAAGGTGTTCTCCACACCGCACGGGCTGGAGGTGCA...AGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTCATCGTGCCCGAAGGTCTTaGCGCACATCTCGCACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRRHLIKSHLTIKAGFTHRARRS*RTSRTQ Trigger: TTGCGTGCGAGATGTGCGGCAAGACCTTCGGGCACG...ATGAGTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | AGGATAAAGGAGTCAGCAGTCTCCCCAGAAGAGAAAATTAATGTTCATTCGTTCTGCACTGCCTTGTGTTaGTCCAGGCTCACCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RIKESAVSPEEKINVHSFCTALC*SRLTAC Trigger: GCACGCGGTGAGCCTGGAGCAACACAAGGCAGTGCA...GAACGAATGAACATTAATTTTCTCTTCTGGGGAGACTGCTGACTCCTTTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTGTGGCCTTCTTCAGAACTCCCTTGGAAGCACAGAACACAGGCTCTAGCTCTGGTGGAATCTTTTaGCACAGTACTGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCVAFFRTPLEAQNTGSSSGGIF*HSTDRD Trigger: ATCCCTGTCAGTACTGTGGCAAAAGATTCCACCAGA...GCTAGAGCCTGTGTTCTGTGCTTCCAAGGGAGTTCTGAAGAAGGCCACACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | GTGATGCCTCCTCTTGTAGCAGCTGCCCAGAGTTCATTCTGGCCTGTGAGACAGGTGTTTCTTCATATCTaGCTTCTGGTGGAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VMPPLVAAAQSSFWPVRQVFLHI*LLVESF Trigger: AAAAGATTCCACCAGAAGTCAGATATGAAGAAACAC...CTGTCTCACAGGCCAGAATGAACTCTGGGCAGCTGCTACAAGAGGAGGCATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TTTACACTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGACGCAAAGGGTCTTGTaGCGCTGTGGGACCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLEKLRKCQKEVPMFVWTQRVL*RCGTGA Trigger: TGCGCCGGTCCCACAGCGGCACAAGACCCTTTGCGT...CCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAGTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCTCTGGTGGAATCTTTTaGCACAGTACTGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVAGLMVHLMISKERGSSGGIF*HSTDRD Trigger: ATCCCTGTCAGTACTGTGGCAAAAGATTCCACCAGA...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | CTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGCCTTCTTGTGGACAGCGTGGATaGCCTCTTGAAGCTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LEKLRKCQKEVPMFVWPSCGQRG*PLEALA Trigger: GGCAAGAGCTTCAAGAGGTCATCCACGCTGTCCACA...AGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCATTCGTTCTCAATAAATGCATCAGTGGCGCTCAAAGCTTAAGAGGTGATGCGTGGATGACCTCTTaGAGCTCTTGCCACAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSFVLNKCISGAQSLRGDAWMTS*SSCHRS Trigger: AGATCTGTGGCAAGAGCTTCAAGAGGTCATCCACGC...ATCACCTCTTAAGCTTTGAGCGCCACTGATGCATTTATTGAGAACGAATGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TTTACACTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGCTGCGTTCCTGGGAGTaGACTGCCTTGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTLEKLRKCQKEVPMFVWLRSWE*TALCCS Trigger: GGAGCAACACAAGGCAGTGCACTCCCAGGAACGCAG...CCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAGTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCATATCTGACTTCTaGTGGAATCTTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSRGRLDGASDDFKGTRFISDF*WNLLPQ Trigger: CTGTGGCAAAAGATTCCACCAGAAGTCAGATATGAA...CCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCATTCGTTCTCAATAAATGCATCAGTGGCGCTCAAAGCTTAAGAGGTGATTCTTACAGTCAAAGCTaGGTTCCTGGGAGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CSFVLNKCISGAQSLRGDSYSQS*VPGSAL Trigger: CAGTGCACTCCCAGGAACGCAGCTTTGACTGTAAGA...ATCACCTCTTAAGCTTTGAGCGCCACTGATGCATTTATTGAGAACGAATGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| 3UTR CAA 72 bp | AAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTaGTGTGGCCTTCTTCAGAACTCCCTTGGAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KNSVSVKKKSQC*CGLLQNSLGST Trigger: TGTGCTTCCAAGGGAGTTCTGAAGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR GCA 90 bp | TTTACACTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGTCTTACAGTCAAAGCTaGGTTCCTGGGAGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FTLEKLRKCQKEVPMFVWSYSQS*VPGSAL Trigger: CAGTGCACTCCCAGGAACGCAGCTTTGACTGTAAGA...CCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAGTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGGTGGAGGATAAAGGAGTCAGCAGTCTCCCCAGAAGAGAAAATTAATGTTTTCATATCTGACTTCTaGTGGAATCTTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VWWRIKESAVSPEEKINVFISDF*WNLLPQ Trigger: CTGTGGCAAAAGATTCCACCAGAAGTCAGATATGAA...AACATTAATTTTCTCTTCTGGGGAGACTGCTGACTCCTTTATCCTCCACCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR TCA 90 bp | AGGATAAAGGAGTCAGCAGTCTCCCCAGAAGAGAAAATTAATGTTCATTCGTTCGTGTTTCTTCATATCTaGCTTCTGGTGGAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIKESAVSPEEKINVHSFVFLHI*LLVESF Trigger: AAAAGATTCCACCAGAAGTCAGATATGAAGAAACAC...GAACGAATGAACATTAATTTTCTCTTCTGGGGAGACTGCTGACTCCTTTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS GCA 90 bp | GGCCCGGCTCCGAGCCGCGCTCGCAGAAGAGGCTCAGGCCCGCGCTaGGCTCCAGCGCGCTGCACTGCCGATAGCTCTGCACCAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPAPSRARRRGSGPR*APARCTADSSAPGA Trigger: GGCACCTGGTGCAGAGCTATCGGCAGTGCAGCGCGCTGGAGCGCAGCGCGGGCCTGAGCCTCTTCTGCGAGCGCGGCTCGGAGCCGGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
||
| CDS GCA 90 bp | CGCGCTCGCAGAAGAGGCTCAGGCCCGCGCTGCGCTCCAGCGCGCTaGACTGCCGATAGCTCTGCACCAGGTGCCGCAGGTCAGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RARRRGSGPRCAPAR*TADSSAPGAAGQTQ Trigger: CTGGGTCTGACCTGCGGCACCTGGTGCAGAGCTATCGGCAGTGCAGCGCGCTGGAGCGCAGCGCGGGCCTGAGCCTCTTCTGCGAGCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
||
| CDS GCA 90 bp | CGTGCAGCTCGTGGCCATGATCTTGGTACAGCCGGCCTGCTGCTGTaGTCGGCCGCTCGTACAGCCCGGCCGCCGCAGGCGCGAAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RAARGHDLGTAGLLL*SAARTARPPQARSR Trigger: GCGACTTCGCGCCTGCGGCGGCCGGGCTGTACGAGCGGCCGAGCACAGCAGCAGGCCGGCTGTACCAAGATCATGGCCACGAGCTGCACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS GCA 90 bp | GTCCGCGTGCAGCTCGTGGCCATGATCTTGGTACAGCCGGCCTGCTaGTGTGCTCGGCCGCTCGTACAGCCCGGCCGCCGCAGGCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: VRVQLVAMILVQPAC*CARPLVQPGRRRRE Trigger: TTCGCGCCTGCGGCGGCCGGGCTGTACGAGCGGCCGAGCACAGCAGCAGGCCGGCTGTACCAAGATCATGGCCACGAGCTGCACGCGGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS GCA 90 bp | CTTGTCCGCGTGCAGCTCGTGGCCATGATCTTGGTACAGCCGGCCTaGTGCTGTGCTCGGCCGCTCGTACAGCCCGGCCGCCGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVRVQLVAMILVQPA*CCARPLVQPGRRRR Trigger: GCGCCTGCGGCGGCCGGGCTGTACGAGCGGCCGAGCACAGCAGCAGGCCGGCTGTACCAAGATCATGGCCACGAGCTGCACGCGGACAAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS CCA 90 bp | GGCGGGGCGGCACGCTCCTGGCACAGCGGCCCGCCAGGCTTCCCCTaGTCATCTGAGGCTGGAAATTCGGGAGCTGAAGGCAAGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGAARSWHSGPPGFP*SSEAGNSGAEGKAL Trigger: GAGCGCCTTGCCTTCAGCTCCCGAATTTCCAGCCTCAGATGACCAGGGGAAGCCTGGCGGGCCGCTGTGCCAGGAGCGTGCCGCCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065478.12 |
||
| CDS GCA 90 bp | CGTGCCCGAAGGTCTTGCCGCACATCTCGCACGCAAAGGGTCTTGTaGCGCTGTGGGACCGGCGCACGTGCACCTCCAGCCCGTGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RARRSCRTSRTQRVL*RCGTGARAPPARAV Trigger: CACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACCCTTTGCGTGCGAGATGTGCGGCAAGACCTTCGGGCACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS CCA 90 bp | ACGAATGTTTGGACCCTCGGATACTCTGAGTTCTCGTGCTGCAGCTaGCGTCCAGGGGGCGGGGCGGCACGCTCCTGGCACAGCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TNVWTLGYSEFSCCS*RPGGGAARSWHSGP Trigger: CGGGCCGCTGTGCCAGGAGCGTGCCGCCCCGCCCCCTGGACGCCAGCTGCAGCACGAGAACTCAGAGTATCCGAGGGTCCAAACATTCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065478.12 |
||
| CDS TCA 90 bp | TCCACCTTGACGCCCACGCTCTTGTCCGCGTGCAGCTCGTGGCCATaGTCTTGGTACAGCCGGCCTGCTGCTGTGCTCGGCCGCTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: STLTPTLLSACSSWP*SWYSRPAAVLGRSY Trigger: GTACGAGCGGCCGAGCACAGCAGCAGGCCGGCTGTACCAAGATCATGGCCACGAGCTGCACGCGGACAAGAGCGTGGGCGTCAAGGTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS TCA 90 bp | CGCCGCCCAGCAGCAGACGGGTGCAAAGCAGCTCCGACTCCACCTTaGCGCCCACGCTCTTGTCCGCGTGCAGCTCGTGGCCATGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRPAADGCKAAPTPP*RPRSCPRAARGHDL Trigger: AAGATCATGGCCACGAGCTGCACGCGGACAAGAGCGTGGGCGTCAAGGTGGAGTCGGAGCTGCTTTGCACCCGTCTGCTGCTGGGCGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS CCA 90 bp | AAGGTCTTGCCGCACATCTCGCACGCAAAGGGTCTTGTGCCGCTGTaGGACCGGCGCACGTGCACCTCCAGCCCGTGCGGTGTGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KVLPHISHAKGLVPL*DRRTCTSSPCGVEN Trigger: GTTCTCCACACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACCCTTTGCGTGCGAGATGTGCGGCAAGACCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS TCA 90 bp | GGTGCCGCAGGTCAGACCCAGCAAGACCGCTCCATGCATAGGGCTTaGAAGGCAGCGTGTAGGGCTGGGCTTCGTCCAGAGAGCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GAAGQTQQDRSMHRA*KAACRAGLRPESGT Trigger: TGTGCCGCTCTCTGGACGAAGCCCAGCCCTACACGCTGCCTTTCAAGCCCTATGCATGGAGCGGTCTTGCTGGGTCTGACCTGCGGCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
||
| CDS GCA 90 bp | GCTCTGCACCAGGTGCCGCAGGTCAGACCCAGCAAGACCGCTCCATaGATAGGGCTTGAAAGGCAGCGTGTAGGGCTGGGCTTCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALHQVPQVRPSKTAP*IGLERQRVGLGFVQ Trigger: CTGGACGAAGCCCAGCCCTACACGCTGCCTTTCAAGCCCTATGCATGGAGCGGTCTTGCTGGGTCTGACCTGCGGCACCTGGTGCAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
||
| CDS GCA 90 bp | ATCTCGCACGCAAAGGGTCTTGTGCCGCTGTGGGACCGGCGCACGTaGACCTCCAGCCCGTGCGGTGTGGAGAACACCTTGCTGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISHAKGLVPLWDRRT*TSSPCGVENTLLHL Trigger: CAAATGCAGCAAGGTGTTCTCCACACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACCCTTTGCGTGCGAGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCCGGGAAGGAAGGTGAAGGGGACTAACCATGATGAGCTTTGCACACTGCTGCCTTCGCAGCTGTaGGGGGACGCGGAGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAPGRKVKGTNHDELCTLLPSQL*GDAEAL Trigger: CAGGGCCTCCGCGTCCCCCAACAGCTGCGAAGGCAG...CAGTGTGCAAAGCTCATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CAA 90 bp | ACTAACCATGATGAGCTTTGCACACTGGACTCAGGGCCTGAGAAGGGGCTGGAGCGCACGCAAAGGGTCTaGTGCCGCTGTGGGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: TNHDELCTLDSGPEKGLERTQRV*CRCGTG Trigger: GCCGGTCCCACAGCGGCACAAGACCCTTTGCGTGCG...CTCCAGCCCCTTCTCAGGCCCTGAGTCCAGTGTGCAAAGCTCATCATGGTTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS CCA 90 bp | ACCAGGAATGAGCGCGGCATGGTGGTCAGCCGCTGGACGAATGTTTaGACCCTCGGATACTCTGAGTTCTCGTGCTGCAGCTGGCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TRNERGMVVSRWTNV*TLGYSEFSCCSWRP Trigger: TGGACGCCAGCTGCAGCACGAGAACTCAGAGTATCCGAGGGTCCAAACATTCGTCCAGCGGCTGACCACCATGCCGCGCTCATTCCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065478.12 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGTGGCCTTCTTCAGAACTCCCTTGGAAGCACAGAACACAGGCTCTAGCCTGCCTTCGCAGCTGTaGGGGGACGCGGAGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCVAFFRTPLEAQNTGSSLPSQL*GDAEAL Trigger: CAGGGCCTCCGCGTCCCCCAACAGCTGCGAAGGCAG...GCTAGAGCCTGTGTTCTGTGCTTCCAAGGGAGTTCTGAAGAAGGCCACACAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTCCCTAAACCAGAGTCTGGTGGAGGATAAAGGAGTCAGCAGTCTCCCCCGCACGCAAAGGGTCTaGTGCCGCTGTGGGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPSLNQSLVEDKGVSSLPRTQRV*CRCGTG Trigger: GCCGGTCCCACAGCGGCACAAGACCCTTTGCGTGCG...GGGGAGACTGCTGACTCCTTTATCCTCCACCAGACTCTGGTTTAGGGAAGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCCGGGAAGGAAGGTGAAGGGGACTAACCATGATGAGCTTTGCACACTGAGCTCCGACTCCACCTaGACGCCCACGCTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAPGRKVKGTNHDELCTLSSDST*TPTLLS Trigger: GGACAAGAGCGTGGGCGTCAAGGTGGAGTCGGAGCT...CAGTGTGCAAAGCTCATCATGGTTAGTCCCCTTCACCTTCCTTCCCGGAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGTGGCCTTCTTCAGAACTCCCTTGGAAGCACAGAACACAGGCTCTAGCCGCACGCAAAGGGTCTaGTGCCGCTGTGGGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCVAFFRTPLEAQNTGSSRTQRV*CRCGTG Trigger: GCCGGTCCCACAGCGGCACAAGACCCTTTGCGTGCG...GCTAGAGCCTGTGTTCTGTGCTTCCAAGGGAGTTCTGAAGAAGGCCACACAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGCAAGATCTCATTTGATCCCCATCTTCAGCTGTAGGGAAGCCCAAAGCGCGTGCCCGAAGGTCTaGCCGCACATCTCGCACGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGARSHLIPIFSCREAQSACPKV*PHISHA Trigger: TGCGTGCGAGATGTGCGGCAAGACCTTCGGGCACGC...GCTTTGGGCTTCCCTACAGCTGAAGATGGGGATCAAATGAGATCTTGCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCGCGTGCCCGAAGGTCTaGCCGCACATCTCGCACGCA | + |
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Preference number: 5 (lower is better) Translates to: LLVAGLMVHLMISKERGSACPKV*PHISHA Trigger: TGCGTGCGAGATGTGCGGCAAGACCTTCGGGCACGC...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTGATGGCACCACAGGACCTCTGACTCCCTCTCATCACCAAGTCCCCTTCAGCGTGGATGACCTCTaGAAGCTCTTGCCACAGATC | + |
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Preference number: 5 (lower is better) Translates to: SSDGTTGPLTPSHHQVPFSVDDL*KLLPQI Trigger: GATCTGTGGCAAGAGCTTCAAGAGGTCATCCACGCT...GAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | CAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTCATCTGCCTTCGCAGCTGTaGGGGGACGCGGAGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QRRHLIKSHLTIKAGFTHLPSQL*GDAEAL Trigger: CAGGGCCTCCGCGTCCCCCAACAGCTGCGAAGGCAG...ATGAGTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | TCTCCCATACCTAGCACAGTTCCTTACTCTGATAACCTGCGGCCAATAATCACTAGCTCCGACTCCACCTaGACGCCCACGCTCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SPIPSTVPYSDNLRPIITSSDST*TPTLLS Trigger: GGACAAGAGCGTGGGCGTCAAGGTGGAGTCGGAGCT...AGTGATTATTGGCCGCAGGTTATCAGAGTAAGGAACTGTGCTAGGTATGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTGATGGCACCACAGGACCTCTGACTCCCTCTCATCACCAAGTCCCCTTCGGTGTGGAGAACACCTaGCTGCATTTGATGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: SSDGTTGPLTPSHHQVPFGVENT*LHLMHL Trigger: CAAATGCATCAAATGCAGCAAGGTGTTCTCCACACC...GAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTGATGGCACCACAGGACCTCTGACTCCCTCTCATCACCAAGTCCCCTTCGACCTCTTGAAGCTCTaGCCACAGATCTTACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSDGTTGPLTPSHHQVPFDLLKL*PQILQS Trigger: TGACTGTAAGATCTGTGGCAAGAGCTTCAAGAGGTC...GAAGGGGACTTGGTGATGAGAGGGAGTCAGAGGTCCTGTGGTGCCATCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | CAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACTCATGCGTGCCCGAAGGTCTaGCCGCACATCTCGCACGCA | + |
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Preference number: 5 (lower is better) Translates to: QRRHLIKSHLTIKAGFTHACPKV*PHISHA Trigger: TGCGTGCGAGATGTGCGGCAAGACCTTCGGGCACGC...ATGAGTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | ATAGCCTTCACCCCACATCTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACGACCTCTTGAAGCTCTaGCCACAGATCTTACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: IAFTPHLPAQASNKVPPNDLLKL*PQILQS Trigger: TGACTGTAAGATCTGTGGCAAGAGCTTCAAGAGGTC...GTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGAAGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | GGAGGTGCAAGATCTCATTTGATCCCCATCTTCAGCTGTAGGGAAGCCCAAAGCGACCTCTTGAAGCTCTaGCCACAGATCTTACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: GGARSHLIPIFSCREAQSDLLKL*PQILQS Trigger: TGACTGTAAGATCTGTGGCAAGAGCTTCAAGAGGTC...GCTTTGGGCTTCCCTACAGCTGAAGATGGGGATCAAATGAGATCTTGCACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCGTGGCAGGCTTGATGGTGCATCTGATGATTTCAAAGGAACGAGGTTCCGGTGTGGAGAACACCTaGCTGCATTTGATGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: LLVAGLMVHLMISKERGSGVENT*LHLMHL Trigger: CAAATGCATCAAATGCAGCAAGGTGTTCTCCACACC...GGAACCTCGTTCCTTTGAAATCATCAGATGCACCATCAAGCCTGCCACGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | CTCCCAGCGCAGGCATCTAATAAAGTCCCACCTAACAATAAAAGCTGGATTTACAGCGTGGATGACCTCTaGAAGCTCTTGCCACAGATC | + |
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Preference number: 5 (lower is better) Translates to: LPAQASNKVPPNNKSWIYSVDDL*KLLPQI Trigger: GATCTGTGGCAAGAGCTTCAAGAGGTCATCCACGCT...GTAAATCCAGCTTTTATTGTTAGGTGGGACTTTATTAGATGCCTGCGCTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS-3UTR CAA 90 bp | CTTGAAAAACTCCGTAAGTGTCAAAAAGAAGTCCCAATGTTTGTGTGGCCTTCTGGTGTGGAGAACACCTaGCTGCATTTGATGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: LEKLRKCQKEVPMFVWPSGVENT*LHLMHL Trigger: CAAATGCATCAAATGCAGCAAGGTGTTCTCCACACC...AGAAGGCCACACAAACATTGGGACTTCTTTTTGACACTTACGGAGTTTTTCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS GCA 72 bp | CAGCTCGTGGCCATGATCTTGGTACAGCCGGCCTGCTaGTGTGCTCGGCCGCTCGTACAGCCCGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: QLVAMILVQPAC*CARPLVQPGRR Trigger: GCGGCGGCCGGGCTGTACGAGCGGCCGAGCACAGCAGCAGGCCGGCTGTACCAAGATCATGGCCACGAGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS GCA 72 bp | AGAAGAGGCTCAGGCCCGCGCTGCGCTCCAGCGCGCTaGACTGCCGATAGCTCTGCACCAGGTGCCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RRGSGPRCAPAR*TADSSAPGAAG Trigger: ACCTGCGGCACCTGGTGCAGAGCTATCGGCAGTGCAGCGCGCTGGAGCGCAGCGCGGGCCTGAGCCTCTTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
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| CDS CCA 72 bp | CCGCACATCTCGCACGCAAAGGGTCTTGTGCCGCTGTaGGACCGGCGCACGTGCACCTCCAGCCCGTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PHISHAKGLVPL*DRRTCTSSPCG Trigger: ACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACCCTTTGCGTGCGAGATGTGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS CAA 72 bp | TCGGAGCAGGGGTCACAAACGCTGCCTTCGCAGCTGTaGGGGGACGCGGAGGCCCTGTCGGGAGCCTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: SEQGSQTLPSQL*GDAEALSGASV Trigger: TACCGAGGCTCCCGACAGGGCCTCCGCGTCCCCCAACAGCTGCGAAGGCAGCGTTTGTGACCCCTGCTCCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
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| CDS TCA 72 bp | GCAGCAGACGGGTGCAAAGCAGCTCCGACTCCACCTTaGCGCCCACGCTCTTGTCCGCGTGCAGCTCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: AADGCKAAPTPP*RPRSCPRAARG Trigger: GCCACGAGCTGCACGCGGACAAGAGCGTGGGCGTCAAGGTGGAGTCGGAGCTGCTTTGCACCCGTCTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS GCA 72 bp | GCAAAGGGTCTTGTGCCGCTGTGGGACCGGCGCACGTaGACCTCCAGCCCGTGCGGTGTGGAGAACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: AKGLVPLWDRRT*TSSPCGVENTL Trigger: CAAGGTGTTCTCCACACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCACAGCGGCACAAGACCCTTTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS CCA 72 bp | GCACGCTCCTGGCACAGCGGCCCGCCAGGCTTCCCCTaGTCATCTGAGGCTGGAAATTCGGGAGCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARSWHSGPPGFP*SSEAGNSGAEG Trigger: GCCTTCAGCTCCCGAATTTCCAGCCTCAGATGACCAGGGGAAGCCTGGCGGGCCGCTGTGCCAGGAGCGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065478.12 |
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| CDS CAA 72 bp | CACGCTCTTGTCCGCGTGCAGCTCGTGGCCATGATCTaGGTACAGCCGGCCTGCTGCTGTGCTCGGCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: HALVRVQLVAMI*VQPACCCARPL Trigger: GAGCGGCCGAGCACAGCAGCAGGCCGGCTGTACCAAGATCATGGCCACGAGCTGCACGCGGACAAGAGCGTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS CAA 72 bp | AGCAGCAGACGGGTGCAAAGCAGCTCCGACTCCACCTaGACGCCCACGCTCTTGTCCGCGTGCAGCTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSRRVQSSSDST*TPTLLSACSSW Trigger: CCACGAGCTGCACGCGGACAAGAGCGTGGGCGTCAAGGTGGAGTCGGAGCTGCTTTGCACCCGTCTGCTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS TCA 72 bp | CGTGTAGGGCTGGGCTTCGTCCAGAGAGCGGCACAGTaGCTTCTCCGACGCTGGAGACACGGAGGGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RVGLGFVQRAAQ*LLRRWRHGGRR Trigger: CCTTCTCCCTCCGTGTCTCCAGCGTCGGAGAAGTCACTGTGCCGCTCTCTGGACGAAGCCCAGCCCTACACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
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| CDS GCA 72 bp | CAGGTGCCGCAGGTCAGACCCAGCAAGACCGCTCCATaGATAGGGCTTGAAAGGCAGCGTGTAGGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QVPQVRPSKTAP*IGLERQRVGLG Trigger: GCCCAGCCCTACACGCTGCCTTTCAAGCCCTATGCATGGAGCGGTCTTGCTGGGTCTGACCTGCGGCACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
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| CDS GCA 72 bp | CCGCTGTGGGACCGGCGCACGTGCACCTCCAGCCCGTaGGGTGTGGAGAACACCTTGCTGCATTTGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: PLWDRRTCTSSP*GVENTLLHLMH Trigger: ATGCATCAAATGCAGCAAGGTGTTCTCCACACCGCACGGGCTGGAGGTGCACGTGCGCCGGTCCCACAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 |
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| CDS TCA 72 bp | GGTCAGACCCAGCAAGACCGCTCCATGCATAGGGCTTaGAAGGCAGCGTGTAGGGCTGGGCTTCGTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GQTQQDRSMHRA*KAACRAGLRPE Trigger: CTCTGGACGAAGCCCAGCCCTACACGCTGCCTTTCAAGCCCTATGCATGGAGCGGTCTTGCTGGGTCTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031205.16 ENSMUST00000065478.12 ENSMUST00000159164.9 ENSMUST00000159263.3 |
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