Pregenerated sensors for GFER (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040888Ensembl transcript IDs: ENSMUST00000046839.10, ENSMUST00000234197.2, ENSMUST00000234235.2, ENSMUST00000234520.2, ENSMUST00000234859.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAATCATCTAGCCCATCTTCCTTTGGGGCAACTATGTCCCAAATaGAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: GNHLAHLPLGQLCPK*RVRGTWTTPASHLQ Trigger: CTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTCATTTGGGACATAGTTGCCCCAAAGGAAGATGGGCTAGATGATTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR GCA 90 bp | GTCCGGGATGACTTCCCGCCTGACGCCATCAGTTACTCCGGTGTATaGACCTGGGTTCCCTTCAGTTGTAGCTCCAAACTTCAGTTTAGG | + |
|
Preference number: 1 (lower is better) Translates to: VRDDFPPDAISYSGV*TWVPFSCSSKLQFR Trigger: CCTAAACTGAAGTTTGGAGCTACAACTGAAGGGAACCCAGGTGCATACACCGGAGTAACTGATGGCGTCAGGCGGGAAGTCATCCCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CCA 90 bp | AGAAAAACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATaGCAGAGTTGCCAGGATCACAGTTCTTGTAGGCAGCCAGGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: RKTLLELGNPASILK*QSCQDHSSCRQPGL Trigger: CAGCCCTGGCTGCCTACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR TCA 90 bp | TCTGCTGACATGCTTGTCATAGCTGCAGAAGACCATGTGCCAGGCTaGCAGTGGGCACCATGGTTGGTACACCCTAAGAGAAAAACCCTG | + |
|
Preference number: 1 (lower is better) Translates to: SADMLVIAAEDHVPG*QWAPWLVHPKRKTL Trigger: CAGGGTTTTTCTCTTAGGGTGTACCAACCATGGTGCCCACTGTCAGCCTGGCACATGGTCTTCTGCAGCTATGACAAGCATGTCAGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR TCA 90 bp | CTAAGAGAAAAACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTaGAATGGCAGAGTTGCCAGGATCACAGTTCTTGTAGGCAGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: LREKPCWSWGTLLQF*NGRVARITVLVGSQ Trigger: CTGGCTGCCTACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTTTTCTCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR CCA 90 bp | GGCCACCCAAGTGTCTGTAGTAGGCACCTCCATTTCTTAATCCTGTaGCAGGGTTCCCAGAGGCAGTGTTCAAAGCTTAAACTCAGGATT | + |
|
Preference number: 1 (lower is better) Translates to: GHPSVCSRHLHFLIL*QGSQRQCSKLKLRI Trigger: AATCCTGAGTTTAAGCTTTGAACACTGCCTCTGGGAACCCTGCCACAGGATTAAGAAATGGAGGTGCCTACTACAGACACTTGGGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234859.2 |
||
| 3UTR GCA 90 bp | TGGCAGGGTTCCCAGAGGCAGTGTTCAAAGCTTAAACTCAGGATTTaGACAAACAAGTGTTGGCTCAGATGCACTTTAATCGTCAATCAG | + |
|
Preference number: 1 (lower is better) Translates to: WQGSQRQCSKLKLRI*TNKCWLRCTLIVNQ Trigger: CTGATTGACGATTAAAGTGCATCTGAGCCAACACTTGTTTGTGCAAATCCTGAGTTTAAGCTTTGAACACTGCCTCTGGGAACCCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234197.2 |
||
| 3UTR GCA 90 bp | TCAAAGCTTAAACTCAGGATTTGCACAAACAAGTGTTGGCTCAGATaGACTTTAATCGTCAATCAGGCTGTTGCCCATAGAACCAGGCTA | + |
|
Preference number: 1 (lower is better) Translates to: SKLKLRICTNKCWLR*TLIVNQAVAHRTRL Trigger: TAGCCTGGTTCTATGGGCAACAGCCTGATTGACGATTAAAGTGCATCTGAGCCAACACTTGTTTGTGCAAATCCTGAGTTTAAGCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234197.2 |
||
| 3UTR CCA 90 bp | GAGGCAGTGTTCAAAGATCCAGAAATCAACTACAGAAACAAGTGTTaGCTCAGATGCACTTTAATCGTCAATCAGGCTGTTGCCCATAGA | + |
|
Preference number: 1 (lower is better) Translates to: EAVFKDPEINYRNKC*LRCTLIVNQAVAHR Trigger: TCTATGGGCAACAGCCTGATTGACGATTAAAGTGCATCTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATCTTTGAACACTGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234520.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTGGTACACCCTAAGAGAAAAACCCTGCTGGAGCTGGGGAACCCTGCTTCAGCAGCTGGACCGCACTaGATGGGGCTCAGATTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: WLVHPKRKTLLELGNPASAAGPH*MGLRFA Trigger: GGCAAATCTGAGCCCCATTCAGTGCGGTCCAGCTGC...TGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTTTTCTCTTAGGGTGTACCAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CCA 90 bp | CGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTCATTTCTTAATCCTGTaGCAGGGTTCCCAGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RGTWTTPASHLQSHGAFAHFLIL*QGSQRQ Trigger: CTGCCTCTGGGAACCCTGCCACAGGATTAAGAAATG...AGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR CAA 90 bp | CAGAGTTTAACCCCTTCCTTGACGTCTTCTAGCGTGACTTCTGGCTaGTCGTCCGGGATGACTTCCCGCCTGACGCCATCAGTTACTCCG | + |
|
Preference number: 2 (lower is better) Translates to: QSLTPSLTSSSVTSG*SSGMTSRLTPSVTP Trigger: CGGAGTAACTGATGGCGTCAGGCGGGAAGTCATCCCGGACGACAAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CAA 90 bp | CACCCCAGCCTGAACTCAGGGCTAACCCAGAGTTTAACCCCTTCCTaGACGTCTTCTAGCGTGACTTCTGGCTTGTCGTCCGGGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: HPSLNSGLTQSLTPS*TSSSVTSGLSSGMT Trigger: AGTCATCCCGGACGACAAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTGGGTTAGCCCTGAGTTCAGGCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGACTGGACCGCACTGAATaGGGCTCAGATTTGCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: PAGAGEPCFNSEMAELPGLDRTE*GSDLPS Trigger: ACTTGGCAAATCTGAGCCCCATTCAGTGCGGTCCAG...TCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAAATGAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCCATTTCTTAATCCTGTaGCAGGGTTCCCAGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SQMKGTRHLDHSCLSPSVHFLIL*QGSQRQ Trigger: CTGCCTCTGGGAACCCTGCCACAGGATTAAGAAATG...GACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTCATTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR-3UTR GCA 90 bp | CGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTAATGGGGCTCAGATTTaGCAAGTGTTGAAAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: RGTWTTPASHLQSHGAFANGAQI*QVLKAI Trigger: AATGGCTTTCAACACTTGGCAAATCTGAGCCCCATT...AGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTTGTCATAGCTGCAGAAGACCATGTGCCAGGCTGACAGTGGGCACCATGTTGATGAGATGCAGGTaGAGCTGGACCGCACTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HACHSCRRPCARLTVGTMLMRCR*SWTALN Trigger: ATTCAGTGCGGTCCAGCTGCACCTGCATCTCATCAA...CATGGTGCCCACTGTCAGCCTGGCACATGGTCTTCTGCAGCTATGACAAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAACCCAGAGTTTAACCCCTTCCTTGACGTCTTCTAGCGTGACTTCTGGCTTGACTGGGTTGATGAGATaGAGGTGCAGCTGGACCGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTQSLTPSLTSSSVTSGLTGLMR*RCSWTA Trigger: TGCGGTCCAGCTGCACCTGCATCTCATCAACCCAGT...CAAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTGGGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCAGTACGCTAAACTCTTaGATACATCCAGAAATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: KGTRHLDHSCLSPSVSWGSTLNS*IHPEIN Trigger: GTTGATTTCTGGATGTATTCAAGAGTTTAGCGTACT...GCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCATGCTGGATCAGAACTTaGCAGAAGAGGAAGTCAATA | + |
|
Preference number: 2 (lower is better) Translates to: NPAGAGEPCFNSEMAELPCWIRT*QKRKSI Trigger: TATTGACTTCCTCTTCTGTCAAGTTCTGATCCAGCA...TGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGCAGATCCGAAAGCCCCTTCTCAAGTCGTCTTTGCTGGATCAGAACTTGACTTGATGAGATGCAGGTaGAGCTGGACCGCACTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: NADPKAPSQVVFAGSELDLMRCR*SWTALN Trigger: ATTCAGTGCGGTCCAGCTGCACCTGCATCTCATCAA...GTCAAGTTCTGATCCAGCAAAGACGACTTGAGAAGGGGCTTTCGGATCTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCACAGTTCTTGTAGGCATTTCTTAATCCTGTaGCAGGGTTCCCAGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NPASILKWQSCQDHSSCRHFLIL*QGSQRQ Trigger: CTGCCTCTGGGAACCCTGCCACAGGATTAAGAAATG...CCTACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGAATGGGGCTCAGATTTaGCAAGTGTTGAAAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: KNPAGAGEPCFNSEMAELNGAQI*QVLKAI Trigger: AATGGCTTTCAACACTTGGCAAATCTGAGCCCCATT...CAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCATTACAGACTCTGAAGCTAATGCAGATCCGAAAGCCCCTTCTCAAGTCGTCTTGTTCAAGATCTCTTaGACTGGGTTGATGAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: FITDSEANADPKAPSQVVLFKIS*TGLMRC Trigger: GCATCTCATCAACCCAGTTCAAGAGATCTTGAACAA...GACGACTTGAGAAGGGGCTTTCGGATCTGCATTAGCTTCAGAGTCTGTAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CAA 90 bp | GAGATTCAGATGACAGCGCCTCTGAAACTCTCTTACACAGATAAGTaGCACAGATTAGAGAGTCAGTACGCTAAACTCTTGAATACATCC | + |
|
Preference number: 2 (lower is better) Translates to: EIQMTAPLKLSYTDK*HRLESQYAKLLNTS Trigger: GGATGTATTCAAGAGTTTAGCGTACTGACTCTCTAATCTGTGCAACTTATCTGTGTAAGAGAGTTTCAGAGGCGCTGTCATCTGAATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAATTTGTTCAAGATCTCTTGAACTGGGTTGATGAGATGCAGGTGCAGCTGAGTACGCTAAACTCTTaGATACATCCAGAAATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: MKFVQDLLNWVDEMQVQLSTLNS*IHPEIN Trigger: GTTGATTTCTGGATGTATTCAAGAGTTTAGCGTACT...CAGCTGCACCTGCATCTCATCAACCCAGTTCAAGAGATCTTGAACAAATTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CAA 90 bp | TACACAGATAAGTTGCACAGATTAGAGAGTCAGTACGCTAAACTCTaGAATACATCCAGAAATCAACTACAGAAACAAGTGTTGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YTDKLHRLESQYAKL*NTSRNQLQKQVLAQ Trigger: CTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATGTATTCAAGAGTTTAGCGTACTGACTCTCTAATCTGTGCAACTTATCTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR GCA 72 bp | GACTTCCCGCCTGACGCCATCAGTTACTCCGGTGTATaGACCTGGGTTCCCTTCAGTTGTAGCTCCAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: DFPPDAISYSGV*TWVPFSCSSKL Trigger: AAGTTTGGAGCTACAACTGAAGGGAACCCAGGTGCATACACCGGAGTAACTGATGGCGTCAGGCGGGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR GCA 72 bp | CTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTaGCAGGATCACAGTTCTTGTAGGCAGCCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGNPASILKWQS*QDHSSCRQPGL Trigger: CAGCCCTGGCTGCCTACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR TCA 72 bp | ATGCTTGTCATAGCTGCAGAAGACCATGTGCCAGGCTaGCAGTGGGCACCATGGTTGGTACACCCTAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: MLVIAAEDHVPG*QWAPWLVHPKR Trigger: TCTCTTAGGGTGTACCAACCATGGTGCCCACTGTCAGCCTGGCACATGGTCTTCTGCAGCTATGACAAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAATGAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCCTTCTCAAGTCGTCTTaGCTGGATCAGAACTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SQMKGTRHLDHSCLSPSVLLKSS*LDQNLT Trigger: TGTCAAGTTCTGATCCAGCAAAGACGACTTGAGAAG...GACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTCATTTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR TCA 72 bp | AAACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTaGAATGGCAGAGTTGCCAGGATCACAGTTCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KPCWSWGTLLQF*NGRVARITVLV Trigger: TACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR CCA 72 bp | GTTGATGAGATGCAGGTGCAGCTGGACCGCACTGAATaGGGCTCAGATTTGCCAAGTGTTGAAAGCCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: VDEMQVQLDRTE*GSDLPSVESHL Trigger: TAAATGGCTTTCAACACTTGGCAAATCTGAGCCCCATTCAGTGCGGTCCAGCTGCACCTGCATCTCATCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCATGTTCACCGAGCCATaGAAGAATTTGAATCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KTLLELGNPASILKWQSCMFTEP*KNLNPA Trigger: GGCTGGATTCAAATTCTTCAATGGCTCGGTGAACAT...GCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGGAATGGGGCTCAGATTaGCCAAGTGTTGAAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KNPAGAGEPCFNSEMAELEWGSD*PSVESH Trigger: ATGGCTTTCAACACTTGGCAAATCTGAGCCCCATTC...CAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAGGTGCAGCTGGACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTTGAATCTTACACAGATAAGTaGCACAGATTAGAGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: MQVQLDRTEWGSDLPSVESYTDK*HRLESQ Trigger: CTGACTCTCTAATCTGTGCAACTTATCTGTGTAAGA...TTCAACACTTGGCAAATCTGAGCCCCATTCAGTGCGGTCCAGCTGCACCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAATTCTGAAATGGCAGAGTTGCCAGGATCACAGTTCTTGTAGGCAGCCAGGGATGTTCACCGAGCCATaGAAGAATTTGAATCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SILKWQSCQDHSSCRQPGMFTEP*KNLNPA Trigger: GGCTGGATTCAAATTCTTCAATGGCTCGGTGAACAT...CCCTGGCTGCCTACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAACCCAGAGTTTAACCCCTTCCTTGACGTCTTCTAGCGTGACTTCTGGCTTGCTTCTCAAGTCGTCTTaGCTGGATCAGAACTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LTQSLTPSLTSSSVTSGLLLKSS*LDQNLT Trigger: TGTCAAGTTCTGATCCAGCAAAGACGACTTGAGAAG...CAAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTGGGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAACCCAGAGTTTAACCCCTTCCTTGACGTCTTCTAGCGTGACTTCTGGCTTGTCTTACACAGATAAGTaGCACAGATTAGAGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTQSLTPSLTSSSVTSGLSYTDK*HRLESQ Trigger: CTGACTCTCTAATCTGTGCAACTTATCTGTGTAAGA...CAAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTGGGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCACAGTTCTTGTAGGTTTGTTCAAGATCTCTaGAACTGGGTTGATGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: NPASILKWQSCQDHSSCRFVQDL*NWVDEM Trigger: CATCTCATCAACCCAGTTCAAGAGATCTTGAACAAA...CCTACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CCA 72 bp | TCAAAGCTTAAACTCAGGATTTGCACAAACAAGTGTTaGCTCAGATGCACTTTAATCGTCAATCAGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SKLKLRICTNKC*LRCTLIVNQAV Trigger: AACAGCCTGATTGACGATTAAAGTGCATCTGAGCCAACACTTGTTTGTGCAAATCCTGAGTTTAAGCTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234197.2 |
||
| 3UTR CCA 72 bp | TTCAAAGATCCAGAAATCAACTACAGAAACAAGTGTTaGCTCAGATGCACTTTAATCGTCAATCAGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FKDPEINYRNKC*LRCTLIVNQAV Trigger: AACAGCCTGATTGACGATTAAAGTGCATCTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATCTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234520.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCCCGTGCTCCAAACCTTaGGGCGCCGGGGCCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGTRHLDHSCLSPSVSWGPCSKP*GAGAAA Trigger: TGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGG...GCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGTCCGCATCCACGACTTaGAGTCCACGCAGGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGYEAPGPLLPLTFSLMGSASTT*SPRRPG Trigger: GCCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGA...CCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGATGAGATGCAGGTGCAGCTGGACCGCACTGAATGGGGCTCAGATTTGCCGTGCTCCAAACCTTaGGGCGCCGGGGCCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVDEMQVQLDRTEWGSDLPCSKP*GAGAAA Trigger: TGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGG...CAAATCTGAGCCCCATTCAGTGCGGTCCAGCTGCACCTGCATCTCATCAACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046839.10 |
||
| CDS-3UTR GCA 90 bp | CAAATGAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCACCGTGCTCCAAACCTTaGGGCGCCGGGGCCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QMKGTRHLDHSCLSPSVSPCSKP*GAGAAA Trigger: TGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGG...TGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTCATTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCCGCATCCACGACTTaGAGTCCACGCAGGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PAGAGEPCFNSEMAELPGSASTT*SPRRPG Trigger: GCCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGA...TCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CCA 90 bp | GGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTGAGATGTCCCGCTTCTGCTaGGTCCGCATCCACGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTWTTPASHLQSHGAFAEMSRFC*VRIHDL Trigger: CAAGTCGTGGATGCGGACCCAGCAGAAGCGGGACAT...CTCAGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTATGTCCCGCTTCTGCTaGGTCCGCATCCACGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGTWTTPASHLQSHGAFAMSRFC*VRIHDL Trigger: CAAGTCGTGGATGCGGACCCAGCAGAAGCGGGACAT...AGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTGAGGCGGCACAGCCACTaGCTGAAGGATACTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EAPGPLLPLTFSLMGLSLRRHSH*LKDTRV Trigger: CACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCT...CAGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGAGGCGGCACAGCCACTaGCTGAAGGATACTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGYEAPGPLLPLTFSLMGRRHSH*LKDTRV Trigger: CACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCT...CCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTAGGCGGCACAGCCACTaGCTGAAGGATACTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGTWTTPASHLQSHGAFARRHSH*LKDTRV Trigger: CACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCT...AGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTGAGGAGCGATTCACCTCATTGTaGAGGCGGCACAGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWTTPASHLQSHGAFAEERFTSL*RRHSHW Trigger: CCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATCG...CTCCTCAGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR CAA 72 bp | ACCCCTTCCTTGACGTCTTCTAGCGTGACTTCTGGCTaGTCGTCCGGGATGACTTCCCGCCTGACGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSLTSSSVTSG*SSGMTSRLTPS Trigger: TGATGGCGTCAGGCGGGAAGTCATCCCGGACGACAAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS-3UTR GCA 90 bp | CATGCTTGTCATAGCTGCAGAAGACCATGTGCCAGGCTGACAGTGGGCACCATGCGATTCACCTCATTGTaGAGGCGGCACAGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HACHSCRRPCARLTVGTMRFTSL*RRHSHW Trigger: CCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATCG...CATGGTGCCCACTGTCAGCCTGGCACATGGTCTTCTGCAGCTATGACAAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGCAGATCCGAAAGCCCCTTCTCAAGTCGTCTTTGCTGGATCAGAACTTGTCCGCATCCACGACTTaGAGTCCACGCAGGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMQIRKPLLKSSLLDQNLSASTT*SPRRPG Trigger: GCCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGA...CAAGTTCTGATCCAGCAAAGACGACTTGAGAAGGGGCTTTCGGATCTGCATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046839.10 |
||
| CDS-3UTR GCA 90 bp | CGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTAGTCAAAATCAGGCTTaGCCAGCTTCCGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RGTWTTPASHLQSHGAFASQNQA*PASDSP Trigger: AGGTGAATCGGAAGCTGGGCAAGCCTGATTTTGACT...AGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAAATGAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCGAGTGCTTGTGTCTaGCTGGTTCCTGCCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQMKGTRHLDHSCLSPSVSSACV*LVPAYP Trigger: AGGATAGGCAGGAACCAGCCAGACACAAGCACTCGA...GACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTCATTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTGAGGAGAGTCAAAATCAGGCTTaGCCAGCTTCCGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TWTTPASHLQSHGAFAEESQNQA*PASDSP Trigger: AGGTGAATCGGAAGCTGGGCAAGCCTGATTTTGACT...CTCCTCAGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCACAGTTCATGTCCCGCTTCTGCTaGGTCCGCATCCACGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGEPCFNSEMAELPGSQFMSRFC*VRIHDL Trigger: CAAGTCGTGGATGCGGACCCAGCAGAAGCGGGACAT...GAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGTGCAGCTGGACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTTGAAGTGCTTGTGTCTGGCTaGTTCCTGCCTATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQVQLDRTEWGSDLPSVEVLVSG*FLPILF Trigger: GAAGAGGATAGGCAGGAACCAGCCAGACACAAGCAC...TTCAACACTTGGCAAATCTGAGCCCCATTCAGTGCGGTCCAGCTGCACCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGTGCTTGTGTCTGGCTaGTTCCTGCCTATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NPAGAGEPCFNSEMAELPVLVSG*FLPILF Trigger: GAAGAGGATAGGCAGGAACCAGCCAGACACAAGCAC...TGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| 3UTR CAA 72 bp | CTGAACTCAGGGCTAACCCAGAGTTTAACCCCTTCCTaGACGTCTTCTAGCGTGACTTCTGGCTTGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSGLTQSLTPS*TSSSVTSGLSS Trigger: GGACGACAAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTGGGTTAGCCCTGAGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS-3UTR GCA 90 bp | CAAATGAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCAAGTCAAAATCAGGCTTaGCCAGCTTCCGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QMKGTRHLDHSCLSPSVSSQNQA*PASDSP Trigger: AGGTGAATCGGAAGCTGGGCAAGCCTGATTTTGACT...TGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTTCCCTTCAGTTGTAGCTCCAAACTTCAGTTTAGGGGTAGAGCCAAATAGGCGGCACAGCCACTaGCTGAAGGATACTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGFPSVVAPNFSLGVEPNRRHSH*LKDTRV Trigger: CACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCT...ATTTGGCTCTACCCCTAAACTGAAGTTTGGAGCTACAACTGAAGGGAACCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCAAGTCAAAATCAGGCTTaGCCAGCTTCCGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AGAGEPCFNSEMAELPGSSQNQA*PASDSP Trigger: AGGTGAATCGGAAGCTGGGCAAGCCTGATTTTGACT...TGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCACAGTTCTTCGAGTGCTTGTGTCTaGCTGGTTCCTGCCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGNPASILKWQSCQDHSSSSACV*LVPAYP Trigger: AGGATAGGCAGGAACCAGCCAGACACAAGCACTCGA...AGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCACAGTTCTTGTAGGTCGAGTGCTTGTGTCTaGCTGGTTCCTGCCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPASILKWQSCQDHSSCRSSACV*LVPAYP Trigger: AGGATAGGCAGGAACCAGCCAGACACAAGCACTCGA...CCTACAAGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCATGGAAAATATATGTATaGACTGGGCCATATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGAGEPCFNSEMAELPGSWKIYV*TGPYPV Trigger: AACAGGATATGGCCCAGTTCATACATATATTTTCCA...TGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| 3UTR CAA 72 bp | CAGGTGCAGCTGGACCGCACTGAATGGGGCTCAGATTaGCCAAGTGTTGAAAGCCATTTAGAAAACCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVQLDRTEWGSD*PSVESHLENHK Trigger: TTTATGGTTTTCTAAATGGCTTTCAACACTTGGCAAATCTGAGCCCCATTCAGTGCGGTCCAGCTGCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CAA 72 bp | CTAATGCAGATCCGAAAGCCCCTTCTCAAGTCGTCTTaGCTGGATCAGAACTTGACAGAAGAGGAAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LMQIRKPLLKSS*LDQNLTEEEVN Trigger: ATTGACTTCCTCTTCTGTCAAGTTCTGATCCAGCAAAGACGACTTGAGAAGGGGCTTTCGGATCTGCATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CAA 72 bp | ATGACAGCGCCTCTGAAACTCTCTTACACAGATAAGTaGCACAGATTAGAGAGTCAGTACGCTAAACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MTAPLKLSYTDK*HRLESQYAKLL Trigger: CAAGAGTTTAGCGTACTGACTCTCTAATCTGTGCAACTTATCTGTGTAAGAGAGTTTCAGAGGCGCTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS-3UTR TCA 90 bp | TTAATCCTGTGGCAGGGTTCCCAGAGGCAGTGTTCAAAGCTTAAACTCAGGATTTGGAAAATATATGTATaGACTGGGCCATATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LILWQGSQRQCSKLKLRIWKIYV*TGPYPV Trigger: AACAGGATATGGCCCAGTTCATACATATATTTTCCA...AATCCTGAGTTTAAGCTTTGAACACTGCCTCTGGGAACCCTGCCACAGGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 |
||
| 3UTR CAA 72 bp | GTTCAAAGATCCAGAAATCAACTACAGAAACAAGTGTaGGCTCAGATGCACTTTAATCGTCAATCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQRSRNQLQKQV*AQMHFNRQSGC Trigger: ACAGCCTGATTGACGATTAAAGTGCATCTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATCTTTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234520.2 |
||
| 3UTR CAA 72 bp | TTGAATACATCCAGAAATCAACTACAGAAACAAGTGTaGGCTCAGATGCACTTTAATCGTCAATCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNTSRNQLQKQV*AQMHFNRQSGC Trigger: ACAGCCTGATTGACGATTAAAGTGCATCTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATGTATTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| 3UTR CAA 72 bp | AAGTTGCACAGATTAGAGAGTCAGTACGCTAAACTCTaGAATACATCCAGAAATCAACTACAGAAACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLHRLESQYAKL*NTSRNQLQKQV Trigger: CACTTGTTTCTGTAGTTGATTTCTGGATGTATTCAAGAGTTTAGCGTACTGACTCTCTAATCTGTGCAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS GCA 90 bp | ATCCACGACTTGAAGTCCACGCAGGCCCGGCACGGTCGCTTCCCGTaGTCCAAACCTTGCGGCGCCGGGGCCGCGGCAGGGGTGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: IHDLKSTQARHGRFP*SKPCGAGAAAGVVS Trigger: CGACACCACCCCTGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGGGAAGCGACCGTGCCGGGCCTGCGTGGACTTCAAGTCGTGGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS GCA 90 bp | AAGTCCACGCAGGCCCGGCACGGTCGCTTCCCGTGCTCCAAACCTTaGGGCGCCGGGGCCGCGGCAGGGGTGGTGTCGTCTCTATGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSTQARHGRFPCSKP*GAGAAAGVVSSLCL Trigger: AAGGCATAGAGACGACACCACCCCTGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGGGAAGCGACCGTGCCGGGCCTGCGTGGACTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS TCA 90 bp | GACCCAATTCTTCCCGATCCTTCTGCTGGGTCCGCATCCACGACTTaGAGTCCACGCAGGCCCGGCACGGTCGCTTCCCGTGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DPILPDPSAGSASTT*SPRRPGTVASRAPN Trigger: GTTTGGAGCACGGGAAGCGACCGTGCCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGACCCAGCAGAAGGATCGGGAAGAATTGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234235.2 |
||
| CDS GCA 90 bp | TGGAGGAAAGCCCAGGTGTGGCGACCCAATTCTTCCCGATCCTTCTaGTGGGTCCGCATCCACGACTTGAAGTCCACGCAGGCCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WRKAQVWRPNSSRSF*WVRIHDLKSTQARH Trigger: GTGCCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGACCCAGCAGAAGGATCGGGAAGAATTGGGTCGCCACACCTGGGCTTTCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234235.2 |
||
| CDS CCA 90 bp | AGGAAAGCCCAGGTGTGGCGACCCAATTCTTCCCGATCCTTCTGCTaGGTCCGCATCCACGACTTGAAGTCCACGCAGGCCCGGCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: RKAQVWRPNSSRSFC*VRIHDLKSTQARHG Trigger: ACCGTGCCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGACCCAGCAGAAGGATCGGGAAGAATTGGGTCGCCACACCTGGGCTTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234235.2 |
||
| CDS-3UTR CAA 90 bp | CGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTTTCCGATTCACCTCATaGTGCAGGCGGCACAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGTWTTPASHLQSHGAFAFRFTS*CRRHSH Trigger: GTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAA...AGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCACAGTTCTTGTCGTCTCTATGCCTaGCGCCGCGGCCCCGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LGNPASILKWQSCQDHSSCRLYA*RRGPAR Trigger: ACGCGCGGGGCCGCGGCGCAAGGCATAGAGACGACA...AGAACTGTGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCAGTCCGCATCCACGACTaGAAGTCCACGCAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGAGEPCFNSEMAELPGSVRIHD*KSTQAR Trigger: CCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGAC...TGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | CGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCTTTCGCTAGGATACTCGAGTGCTaGTGTCTGGCTGGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGTWTTPASHLQSHGAFARILEC*CLAGSC Trigger: GCAGGAACCAGCCAGACACAAGCACTCGAGTATCCT...AGCGAAAGCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATGGGGCAGGATACTCGAGTGCTaGTGTCTGGCTGGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KGTRHLDHSCLSPSVSWGRILEC*CLAGSC Trigger: GCAGGAACCAGCCAGACACAAGCACTCGAGTATCCT...GCCCCATGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS TCA 90 bp | CCAGCTTCCGATTCACCTCATTGTGCAGGCGGCACAGCCACTGGCTaGAGGATACTCGAGTGCTTGTGTCTGGCTGGTTCCTGCCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PASDSPHCAGGTATG*RILECLCLAGSCLS Trigger: GGATAGGCAGGAACCAGCCAGACACAAGCACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAAGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS CCA 90 bp | ATGGAGGAAAGCCCAGGTGTGGCGACCCAATTCTTCCCGATCCTGTaGACAGTCCTCCCTAAACTTGATGTCCCGCTTCTGCTGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MEESPGVATQFFPIL*TVLPKLDVPLLLGP Trigger: CGGACCCAGCAGAAGCGGGACATCAAGTTTAGGGAGGACTGTCCACAGGATCGGGAAGAATTGGGTCGCCACACCTGGGCTTTCCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS CCA 90 bp | TTGCCCAGCTTCCGATTCACCTCATTGTGCAGGCGGCACAGCCACTaGCTGAAGGATACTCGAGTGCTTGTGTCTGGCTGGTTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSFRFTSLCRRHSH*LKDTRVLVSGWFLP Trigger: AGGCAGGAACCAGCCAGACACAAGCACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAAGCTGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCGTCCGCATCCACGACTaGAAGTCCACGCAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KTLLELGNPASILKWQSCVRIHD*KSTQAR Trigger: CCGGGCCTGCGTGGACTTCAAGTCGTGGATGCGGAC...GCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGCCAAATTCATTACAGACTCTGAAGCTAATGCAGATCCGAAAGCCCCTTGTCGTCTCTATGCCTaGCGCCGCGGCCCCGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRAKFITDSEANADPKAPCRLYA*RRGPAR Trigger: ACGCGCGGGGCCGCGGCGCAAGGCATAGAGACGACA...AGGGGCTTTCGGATCTGCATTAGCTTCAGAGTCTGTAATGAATTTGGCTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046839.10 |
||
| CDS-3UTR CAA 90 bp | CATGCTTGTCATAGCTGCAGAAGACCATGTGCCAGGCTGACAGTGGGCACCATGGGCCATATCCTGTTGTaGTTCTGGCGTGGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HACHSCRRPCARLTVGTMGHILL*FWRGPV Trigger: GACAGGCCCACGCCAGAACAACAACAGGATATGGCC...CATGGTGCCCACTGTCAGCCTGGCACATGGTCTTCTGCAGCTATGACAAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGAAGGGTACGAGGCACCTGGACCACTCCTGCCTCTCACCTTCAGTCTCATTCCGATTCACCTCATaGTGCAGGCGGCACAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QMKGTRHLDHSCLSPSVSFRFTS*CRRHSH Trigger: GTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAA...TGAGACTGAAGGTGAGAGGCAGGAGTGGTCCAGGTGCCTCGTACCCTTCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS GCA 90 bp | GAGCAGTCAAAATCAGGCTTGCCCAGCTTCCGATTCACCTCATTGTaGAGGCGGCACAGCCACTGGCTGAAGGATACTCGAGTGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EQSKSGLPSFRFTSL*RRHSHWLKDTRVLV Trigger: CACAAGCACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAAGCTGGGCAAGCCTGATTTTGACTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS CCA 90 bp | CGGCACAGCCACTGGCTGAAGGATACTCGAGTGCTTGTGTCTGGCTaGTTCCTGCCTATCCTCTTCCTTATGTCTTCCGCACATTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RHSHWLKDTRVLVSG*FLPILFLMSSAHSS Trigger: CGAGGAATGTGCGGAAGACATAAGGAAGAGGATAGGCAGGAACCAGCCAGACACAAGCACTCGAGTATCCTTCAGCCAGTGGCTGTGCCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS CCA 90 bp | CAGGCGGCACAGCCACTGGCTGAAGGATACTCGAGTGCTTGTGTCTaGCTGGTTCCTGCCTATCCTCTTCCTTATGTCTTCCGCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: QAAQPLAEGYSSACV*LVPAYPLPYVFRTF Trigger: GAATGTGCGGAAGACATAAGGAAGAGGATAGGCAGGAACCAGCCAGACACAAGCACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTTGTCATAGCTGCAGAAGACCATGTGCCAGGCTGACAGTGGGCACCATGCAGTCCTCCCTAAACTaGATGTCCCGCTTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HACHSCRRPCARLTVGTMQSSLN*MSRFCW Trigger: CCAGCAGAAGCGGGACATCAAGTTTAGGGAGGACTG...CATGGTGCCCACTGTCAGCCTGGCACATGGTCTTCTGCAGCTATGACAAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATCAGGCCATATCCTGTTGTaGTTCTGGCGTGGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGAGEPCFNSEMAELPGSGHILL*FWRGPV Trigger: GACAGGCCCACGCCAGAACAACAACAGGATATGGCC...TGATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTTCAAAGATCCAGAAATCAACTACAGAAACAAGTGTTGGCTCAGATGCTGTCGTCTCTATGCCTaGCGCCGCGGCCCCGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: AVFKDPEINYRNKCWLRCCRLYA*RRGPAR Trigger: ACGCGCGGGGCCGCGGCGCAAGGCATAGAGACGACA...GCATCTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATCTTTGAACACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | AACCCTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCACAGTCCTCCCTAAACTaGATGTCCCGCTTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NPAGAGEPCFNSEMAELPQSSLN*MSRFCW Trigger: CCAGCAGAAGCGGGACATCAAGTTTAGGGAGGACTG...TGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGAGCTGGGGAACCCTGCTTCAATTCTGAAATGGCAGAGTTGCCAGGATAGGATACTCGAGTGCTaGTGTCTGGCTGGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLELGNPASILKWQSCQDRILEC*CLAGSC Trigger: GCAGGAACCAGCCAGACACAAGCACTCGAGTATCCT...ATCCTGGCAACTCTGCCATTTCAGAATTGAAGCAGGGTTCCCCAGCTCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGCTGGACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTTGAAAGCCATTAGGATACTCGAGTGCTaGTGTCTGGCTGGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSWTALNGAQICQVLKAIRILEC*CLAGSC Trigger: GCAGGAACCAGCCAGACACAAGCACTCGAGTATCCT...AATGGCTTTCAACACTTGGCAAATCTGAGCCCCATTCAGTGCGGTCCAGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS CCA 90 bp | CTTGGAAAATATATGTATGAACTGGGCCATATCCTGTTGTTGTTCTaGCGTGGGCCTGTCCGGGTAATAGGCGGCCAGCGTATGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGKYMYELGHILLLF*RGPVRVIGGQRMEE Trigger: TTCCTCCATACGCTGGCCGCCTATTACCCGGACAGGCCCACGCCAGAACAACAACAGGATATGGCCCAGTTCATACATATATTTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTTCAAAGATCCAGAAATCAACTACAGAAACAAGTGTTGGCTCAGATGCGGCCATATCCTGTTGTaGTTCTGGCGTGGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVFKDPEINYRNKCWLRCGHILL*FWRGPV Trigger: GACAGGCCCACGCCAGAACAACAACAGGATATGGCC...GCATCTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATCTTTGAACACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTTCAAAGATCCAGAAATCAACTACAGAAACAAGTGTTGGCTCAGATGCTTCCGATTCACCTCATaGTGCAGGCGGCACAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVFKDPEINYRNKCWLRCFRFTS*CRRHSH Trigger: GTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAA...GCATCTGAGCCAACACTTGTTTCTGTAGTTGATTTCTGGATCTTTGAACACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234520.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTTAAACTCAGGATTTGCACAAACAAGTGTTGGCTCAGATGCACTTTAATCCAGTCCTCCCTAAACTaGATGTCCCGCTTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLKLRICTNKCWLRCTLIQSSLN*MSRFCW Trigger: CCAGCAGAAGCGGGACATCAAGTTTAGGGAGGACTG...GATTAAAGTGCATCTGAGCCAACACTTGTTTGTGCAAATCCTGAGTTTAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234197.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGTCAGTACGCTAAACTCTTGAATACATCCAGAAATCAACTACAGAAACAATTCCGATTCACCTCATaGTGCAGGCGGCACAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ESQYAKLLNTSRNQLQKQFRFTS*CRRHSH Trigger: GTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAA...TTGTTTCTGTAGTTGATTTCTGGATGTATTCAAGAGTTTAGCGTACTGACTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046839.10 ENSMUST00000234859.2 |
||
| CDS CAA 72 bp | GCAGGCCCGGCACGGTCGCTTCCCGTGCTCCAAACCTaGCGGCGCCGGGGCCGCGGCAGGGGTGGTGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: AGPARSLPVLQT*RRRGRGRGGVV Trigger: GACGACACCACCCCTGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGGGAAGCGACCGTGCCGGGCCTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS GCA 72 bp | CAGGCCCGGCACGGTCGCTTCCCGTGCTCCAAACCTTaGGGCGCCGGGGCCGCGGCAGGGGTGGTGTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QARHGRFPCSKP*GAGAAAGVVSS Trigger: AGACGACACCACCCCTGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGGGAAGCGACCGTGCCGGGCCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS GCA 72 bp | TTGAAGTCCACGCAGGCCCGGCACGGTCGCTTCCCGTaGTCCAAACCTTGCGGCGCCGGGGCCGCGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LKSTQARHGRFP*SKPCGAGAAAG Trigger: CCCTGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGGGAAGCGACCGTGCCGGGCCTGCGTGGACTTCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS CAA 90 bp | GAAGTCCACGCAGGCCCGGCACGGTCGCTTCCCGTGCTCCAAACCTaGCGGCGCCGGGGCCGCGGCAGGGGTGGTGTCGTCTCTATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EVHAGPARSLPVLQT*RRRGRGRGGVVSMP Trigger: AGGCATAGAGACGACACCACCCCTGCCGCGGCCCCGGCGCCGCAAGGTTTGGAGCACGGGAAGCGACCGTGCCGGGCCTGCGTGGACTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS GCA 72 bp | GCCCAGGTGTGGCGACCCAATTCTTCCCGATCCTTCTaGTGGGTCCGCATCCACGACTTGAAGTCCACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AQVWRPNSSRSF*WVRIHDLKSTQ Trigger: CTGCGTGGACTTCAAGTCGTGGATGCGGACCCAGCAGAAGGATCGGGAAGAATTGGGTCGCCACACCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234235.2 |
||
| CDS CCA 72 bp | CAGGTGTGGCGACCCAATTCTTCCCGATCCTTCTGCTaGGTCCGCATCCACGACTTGAAGTCCACGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QVWRPNSSRSFC*VRIHDLKSTQA Trigger: GGCCTGCGTGGACTTCAAGTCGTGGATGCGGACCCAGCAGAAGGATCGGGAAGAATTGGGTCGCCACACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234235.2 |
||
| CDS CAA 90 bp | CCGTCACGCCAACGCTCATCTACTCTCGAGCAGTCAAAATCAGGCTaGCCCAGCTTCCGATTCACCTCATTGTGCAGGCGGCACAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSRQRSSTLEQSKSG*PSFRFTSLCRRHSH Trigger: GTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAAGCTGGGCAAGCCTGATTTTGACTGCTCGAGAGTAGATGAGCGTTGGCGTGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS TCA 72 bp | GATTCACCTCATTGTGCAGGCGGCACAGCCACTGGCTaGAGGATACTCGAGTGCTTGTGTCTGGCTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSPHCAGGTATG*RILECLCLAGS Trigger: GGAACCAGCCAGACACAAGCACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS CCA 72 bp | TTCCGATTCACCTCATTGTGCAGGCGGCACAGCCACTaGCTGAAGGATACTCGAGTGCTTGTGTCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FRFTSLCRRHSH*LKDTRVLVSGW Trigger: CCAGCCAGACACAAGCACTCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS GCA 72 bp | AAATCAGGCTTGCCCAGCTTCCGATTCACCTCATTGTaGAGGCGGCACAGCCACTGGCTGAAGGATACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: KSGLPSFRFTSL*RRHSHWLKDTR Trigger: TCGAGTATCCTTCAGCCAGTGGCTGTGCCGCCTGCACAATGAGGTGAATCGGAAGCTGGGCAAGCCTGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS CCA 72 bp | TATATGTATGAACTGGGCCATATCCTGTTGTTGTTCTaGCGTGGGCCTGTCCGGGTAATAGGCGGCCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: YMYELGHILLLF*RGPVRVIGGQR Trigger: ACGCTGGCCGCCTATTACCCGGACAGGCCCACGCCAGAACAACAACAGGATATGGCCCAGTTCATACATATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS CAA 72 bp | CAACGCTCATCTACTCTCGAGCAGTCAAAATCAGGCTaGCCCAGCTTCCGATTCACCTCATTGTGCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QRSSTLEQSKSG*PSFRFTSLCRR Trigger: CCGCCTGCACAATGAGGTGAATCGGAAGCTGGGCAAGCCTGATTTTGACTGCTCGAGAGTAGATGAGCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS CCA 72 bp | CACTGGCTGAAGGATACTCGAGTGCTTGTGTCTGGCTaGTTCCTGCCTATCCTCTTCCTTATGTCTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: HWLKDTRVLVSG*FLPILFLMSSA Trigger: TGCGGAAGACATAAGGAAGAGGATAGGCAGGAACCAGCCAGACACAAGCACTCGAGTATCCTTCAGCCAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 ENSMUST00000234859.2 |
||
| CDS CAA 72 bp | GGAAAATATATGTATGAACTGGGCCATATCCTGTTGTaGTTCTGGCGTGGGCCTGTCCGGGTAATAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GKYMYELGHILL*FWRGPVRVIGG Trigger: GCCGCCTATTACCCGGACAGGCCCACGCCAGAACAACAACAGGATATGGCCCAGTTCATACATATATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS CAA 90 bp | GTAAAACTTGGAAAATATATGTATGAACTGGGCCATATCCTGTTGTaGTTCTGGCGTGGGCCTGTCCGGGTAATAGGCGGCCAGCGTATG | + |
|
Preference number: 6 (lower is better) Translates to: VKLGKYMYELGHILL*FWRGPVRVIGGQRM Trigger: CATACGCTGGCCGCCTATTACCCGGACAGGCCCACGCCAGAACAACAACAGGATATGGCCCAGTTCATACATATATTTTCCAAGTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||
| CDS CAA 72 bp | CTTGGAAAATATATGTATGAACTGGGCCATATCCTGTaGTTGTTCTGGCGTGGGCCTGTCCGGGTAATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGKYMYELGHIL*LFWRGPVRVIG Trigger: GCCTATTACCCGGACAGGCCCACGCCAGAACAACAACAGGATATGGCCCAGTTCATACATATATTTTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046839.10 ENSMUST00000234197.2 ENSMUST00000234235.2 ENSMUST00000234520.2 |
||