Pregenerated sensors for GET4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025858Ensembl transcript IDs: ENSMUST00000026976.12, ENSMUST00000110878.2, ENSMUST00000130326.8, ENSMUST00000138508.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGACACAGGAGAAGGGGTACCAGTCACTGACGCCAGGCTGCTGTaGCACCCTGCAGCCCTCCCCAAGGAAGCAGAGACAAGGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: LDTGEGVPVTDARLL*HPAALPKEAETRMA Trigger: TGCCATCCTTGTCTCTGCTTCCTTGGGGAGGGCTGCAGGGTGGCACAGCAGCCTGGCGTCAGTGACTGGTACCCCTTCTCCTGTGTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR GCA 90 bp | CTGCACTGGACACAGGAGAAGGGGTACCAGTCACTGACGCCAGGCTaGTGTGCCACCCTGCAGCCCTCCCCAAGGAAGCAGAGACAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LHWTQEKGYQSLTPG*CATLQPSPRKQRQG Trigger: TCCTTGTCTCTGCTTCCTTGGGGAGGGCTGCAGGGTGGCACAGCAGCCTGGCGTCAGTGACTGGTACCCCTTCTCCTGTGTCCAGTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR GCA 90 bp | TCTCGTCTGCAGGACACGGGATCCTGCGTGGCTCACAGCGGCAGCTaGCACTTCTCTGGCATGCCATGGCTGCACTGGACACAGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: SRLQDTGSCVAHSGS*HFSGMPWLHWTQEK Trigger: CTTCTCCTGTGTCCAGTGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCCGCTGTGAGCCACGCAGGATCCCGTGTCCTGCAGACGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR CCA 90 bp | TCCTGCGTGGCTCACAGCGGCAGCTGCCACTTCTCTGGCATGCCATaGCTGCACTGGACACAGGAGAAGGGGTACCAGTCACTGACGCCA | + |
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Preference number: 1 (lower is better) Translates to: SCVAHSGSCHFSGMP*LHWTQEKGYQSLTP Trigger: TGGCGTCAGTGACTGGTACCCCTTCTCCTGTGTCCAGTGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCCGCTGTGAGCCACGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR TCA 90 bp | GGCAGCGGGTGCTGCAGCAAGGGCTGCGCTTTATTGTGGGTGATCTaGAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GSGCCSKGCALLWVI*RNTIGQQKLGLALG Trigger: ACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGATCACCCACAATAAAGCGCAGCCCTTGCTGCAGCACCCGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR CCA 90 bp | CAGCAAGGGCTGCGCTTTATTGTGGGTGATCTGAAGGAACACGATTaGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGC | + |
|
Preference number: 1 (lower is better) Translates to: QQGLRFIVGDLKEHD*PAEAGPCSWSWPHS Trigger: GCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGATCACCCACAATAAAGCGCAGCCCTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR CCA 90 bp | AAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTaGCCACACAGCCCTCAACCACCATACATAAATAGGGACAGACTC | + |
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Preference number: 1 (lower is better) Translates to: KEHDWPAEAGPCSWS*PHSPQPPYINRDRL Trigger: GAGTCTGTCCCTATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR TCA 90 bp | AGCCTAGCCGCCACAGCACACGCTCTGTCCCTGGGAAGCACACCATaGTTGCAAAACAACTCTGTGTCCAAACAAAATCCCACAAACAAG | + |
|
Preference number: 1 (lower is better) Translates to: SLAATAHALSLGSTP*LQNNSVSKQNPTNK Trigger: CTTGTTTGTGGGATTTTGTTTGGACACAGAGTTGTTTTGCAATCATGGTGTGCTTCCCAGGGACAGAGCGTGTGCTGTGGCGGCTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR-3UTR TCA 90 bp | CACCCTGCAGCCCTCCCCAAGGAAGCAGAGACAAGGATGGCAGCGGGTGCTGCACGCCCAGCCTGGCACTaGATCCGTCCCAGCGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HPAALPKEAETRMAAGAARPAWH*IRPSGA Trigger: GGCACCGCTGGGACGGATTCAGTGCCAGGCTGGGCG...TGCAGCACCCGCTGCCATCCTTGTCTCTGCTTCCTTGGGGAGGGCTGCAGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR-3UTR GCA 90 bp | CGTGGCTCACAGCGGCAGCTGCCACTTCTCTGGCATGCCATGGCTGCACTGGACGCTGCTGTGCCACCCTaGAGCCCTCCCCAAGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RGSQRQLPLLWHAMAALDAAVPP*SPPQGS Trigger: GCTTCCTTGGGGAGGGCTGCAGGGTGGCACAGCAGC...GTCCAGTGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCCGCTGTGAGCCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR-3UTR GCA 90 bp | GGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGACTGGTAAGGGGCCTTaGGCCCAGCCTGGCACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GTRLASRSWALLLVLATQTGKGP*AQPGTE Trigger: TTCAGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGT...CTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTGGCATGCCATGGCTGCACTGGACACAGGAGAAGGGGTACCAGTCACTCCTTGCTCTTGGTCCTaGCCACACAGCCCTCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: LLWHAMAALDTGEGVPVTPCSWS*PHSPQP Trigger: TGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGG...AGTGACTGGTACCCCTTCTCCTGTGTCCAGTGCAGCCATGGCATGCCAGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGGAAGCACACCATGATTGCAAAACAACTCTGTGTCCAAACAAAATCCCAGCGCTTTATTGTGGGTaGTCTGAAGGAACACGATTG | + |
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Preference number: 2 (lower is better) Translates to: PWEAHHDCKTTLCPNKIPALYCG*SEGTRL Trigger: CAATCGTGTTCCTTCAGATCACCCACAATAAAGCGC...TGGGATTTTGTTTGGACACAGAGTTGTTTTGCAATCATGGTGTGCTTCCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR CAA 90 bp | TTTATAATCAGACTGGTAGCGTGGGTACTGTCTGTGGTAATGGGGTaGCTTATTCATGGACTGGTTATTTGGTTAAGTCCTAAAACGTTA | + |
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Preference number: 2 (lower is better) Translates to: FIIRLVAWVLSVVMG*LIHGLVIWLSPKTL Trigger: TAACGTTTTAGGACTTAACCAAATAACCAGTCCATGAATAAGCAACCCCATTACCACAGACAGTACCCACGCTACCAGTCTGATTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR GCA 72 bp | CTTGCGCCCAGCCTGGCACTGAATCCGTCCCAGCGGTaGCGGCCATGGACATCTCCACGCTGGCCAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LAPSLALNPSQR*RPWTSPRWPGS Trigger: GCTGCCTGGCCAGCGTGGAGATGTCCATGGCCGGCACCGCTGGGACGGATTCAGTGCCAGGCTGGGCGCAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR GCA 72 bp | TCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTaGGCCCAGCCTGGCACTGAATCCGTCCCAGCGGTG | + |
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Preference number: 3 (lower is better) Translates to: SATEQQPTGKGP*AQPGTESVPAV Trigger: CACCGCTGGGACGGATTCAGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCTGCGTGGCTCACAGCGGCAGCTGCCACTTCTCTGGCATGCCATGGCTGCAAGCTGGGCCTTGCTCTaGGTCCTGGCCACACAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ILRGSQRQLPLLWHAMAASWALL*VLATQP Trigger: GGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCT...TGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCCGCTGTGAGCCACGCAGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR TCA 72 bp | CAGCGTGGAGCTGAAGGGACCAGCAGGGCTGCAGCTTaGACGGAGGAGCCCATAGACTACAGCACGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QRGAEGTSRAAA*TEEPIDYSTGH Trigger: GTGGCCCGTGCTGTAGTCTATGGGCTCCTCCGTTCAAGCTGCAGCCCTGCTGGTCCCTTCAGCTCCACGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR GCA 72 bp | GCGTGGCTCACAGCGGCAGCTGCCACTTCTCTGGCATaGCATGGCTGCACTGGACACAGGAGAAGGGGTACC | + |
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Preference number: 3 (lower is better) Translates to: AWLTAAAATSLA*HGCTGHRRRGT Trigger: GGTACCCCTTCTCCTGTGTCCAGTGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCCGCTGTGAGCCACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR GCA 72 bp | CAGGACACGGGATCCTGCGTGGCTCACAGCGGCAGCTaGCACTTCTCTGGCATGCCATGGCTGCACTGGACA | + |
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Preference number: 3 (lower is better) Translates to: QDTGSCVAHSGS*HFSGMPWLHWT Trigger: TGTCCAGTGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCCGCTGTGAGCCACGCAGGATCCCGTGTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR CCA 72 bp | ATCCTGCGTGGCTCACAGCGGCAGCTGCCACTTCTCTaGCATGCCATGGCTGCACTGGACACAGGAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILRGSQRQLPLL*HAMAALDTGEG Trigger: CCCTTCTCCTGTGTCCAGTGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCCGCTGTGAGCCACGCAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR CCA 72 bp | ACCCTGCAGCCCTCCCCAAGGAAGCAGAGACAAGGATaGCAGCGGGTGCTGCAGCAAGGGCTGCGCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: TLQPSPRKQRQG*QRVLQQGLRFI Trigger: AATAAAGCGCAGCCCTTGCTGCAGCACCCGCTGCCATCCTTGTCTCTGCTTCCTTGGGGAGGGCTGCAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR CCA 72 bp | GGCAGCTGCCACTTCTCTGGCATGCCATGGCTGCACTaGACACAGGAGAAGGGGTACCAGTCACTGACGCCA | + |
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Preference number: 3 (lower is better) Translates to: GSCHFSGMPWLH*TQEKGYQSLTP Trigger: TGGCGTCAGTGACTGGTACCCCTTCTCCTGTGTCCAGTGCAGCCATGGCATGCCAGAGAAGTGGCAGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR GCA 72 bp | CTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTaGTCTTGGTCCTGGCCACACAGCCCTCAACCACCA | + |
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Preference number: 3 (lower is better) Translates to: LKEHDWPAEAGP*SWSWPHSPQPP Trigger: TGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR TCA 72 bp | TGCTGCAGCAAGGGCTGCGCTTTATTGTGGGTGATCTaGAGGAACACGATTGGCCAGCAGAAGCTGGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: CCSKGCALLWVI*RNTIGQQKLGL Trigger: AAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGATCACCCACAATAAAGCGCAGCCCTTGCTGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR CCA 72 bp | GATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTaGCCACACAGCCCTCAACCACCATACATAAATAGG | + |
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Preference number: 3 (lower is better) Translates to: DWPAEAGPCSWS*PHSPQPPYINR Trigger: CCTATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR CCA 72 bp | CTGCGCTTTATTGTGGGTGATCTGAAGGAACACGATTaGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LRFIVGDLKEHD*PAEAGPCSWSW Trigger: CCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGATCACCCACAATAAAGCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| 3UTR GCA 72 bp | CAGCACACGCTCTGTCCCTGGGAAGCACACCATGATTaGAAAACAACTCTGTGTCCAAACAAAATCCCACAA | + |
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Preference number: 3 (lower is better) Translates to: QHTLCPWEAHHD*KTTLCPNKIPQ Trigger: TTGTGGGATTTTGTTTGGACACAGAGTTGTTTTGCAATCATGGTGTGCTTCCCAGGGACAGAGCGTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| 3UTR CCA 72 bp | AATAAAGTGTCTCCCTTTATAATCAGACTGGTAGCGTaGGTACTGTCTGTGGTAATGGGGTTGCTTATTCAT | + |
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Preference number: 3 (lower is better) Translates to: NKVSPFIIRLVA*VLSVVMGLLIH Trigger: ATGAATAAGCAACCCCATTACCACAGACAGTACCCACGCTACCAGTCTGATTATAAAGGGAGACACTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| CDS-3UTR CCA 90 bp | GATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGTTGCCCTCCACGCGCTaGACGCCGCCGCGGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: DGPSATEQQPTGKGPCAQLPSTR*TPPRLR Trigger: CCGCAACCGCGGCGGCGTCCAGCGCGTGGAGGGCAA...CTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| CDS-3UTR TCA 90 bp | CCTGGCACTGAATCCGTCCCAGCGGTGCCGGCCATGGACATCTCCACGCTGGCCGCTCGCACAGCACCGTaGAGACAGCCAGCTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGTESVPAVPAMDISTLAARTAP*RQPACH Trigger: GTGGCAAGCTGGCTGTCTTCACGGTGCTGTGCGAGC...GGCCAGCGTGGAGATGTCCATGGCCGGCACCGCTGGGACGGATTCAGTGCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR TCA 90 bp | CTGAATCCGTCCCAGCGGTGCCGGCCATGGACATCTCCACGCTGGCCAGGCAGCGCTCTGAGGAGCCCATaGGGCTGCTCAGCAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LNPSQRCRPWTSPRWPGSALRSP*GCSAGS Trigger: GGAACCTGCTGAGCAGCCTCATGGGCTCCTCAGAGC...GCTGCCTGGCCAGCGTGGAGATGTCCATGGCCGGCACCGCTGGGACGGATTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR TCA 90 bp | GCACTGAATCCGTCCCAGCGGTGCCGGCCATGGACATCTCCACGCTGGCCAGGCCCCCTCTTCCTGCTCTaGGGAGCCCATGAGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ALNPSQRCRPWTSPRWPGPLFLL*GAHEAA Trigger: AGCAGCCTCATGGGCTCCTCAGAGCAGGAAGAGGGG...GCCTGGCCAGCGTGGAGATGTCCATGGCCGGCACCGCTGGGACGGATTCAGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR GCA 90 bp | GATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAATTGCGGGCGCCCTCCTaGTCTGCCATCGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: DWPAEAGPCSWSWPHSPQLRAPS*SAIAAA Trigger: GGCGGCGGCGATGGCAGAGCAGGAGGGCGCCCGCAA...TTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| CDS-3UTR CCA 90 bp | GATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGAGGGCCAGCAGCTGGTaGAGTCGAGGATGGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DGPSATEQQPTGKGPCAQRASSW*SRGWPS Trigger: ACTGGGCCATCCTCGACTCCACCAGCTGCTGGCCCT...CTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR CCA 90 bp | CTGAATCCGTCCCAGCGGTGCCGGCCATGGACATCTCCACGCTGGCCAGGCAGCAGGGCCAGCAGCTGGTaGAGTCGAGGATGGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LNPSQRCRPWTSPRWPGSRASSW*SRGWPS Trigger: ACTGGGCCATCCTCGACTCCACCAGCTGCTGGCCCT...GCTGCCTGGCCAGCGTGGAGATGTCCATGGCCGGCACCGCTGGGACGGATTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR CCA 90 bp | TCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTGTGAGGGCCAGCAGCTaGTGGAGTCGAGGATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SATEQQPTGKGPCAQPGTVRASS*WSRGWP Trigger: GGGCCATCCTCGACTCCACCAGCTGCTGGCCCTCAC...AGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR CCA 90 bp | GATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGACTCGACCAGCATGTTaGCGCAGCCCTCGCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: DGPSATEQQPTGKGPCAQTRPAC*RSPRHH Trigger: GTGATGGCGAGGGCTGCGCCAACATGCTGGTCGAGT...CTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR CCA 90 bp | CAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTGACTCGACCAGCATGTTaGCGCAGCCCTCGCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: QPQSSSPLVRGLAPSLALTRPAC*RSPRHH Trigger: GTGATGGCGAGGGCTGCGCCAACATGCTGGTCGAGT...CAGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR GCA 90 bp | CAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTGCCAGCTCGATGGGGCTaGTGTCATCCTGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QPQSSSPLVRGLAPSLALPARWG*CHPGSL Trigger: AAGAGAGCCAGGATGACAGCAGCCCCATCGAGCTGG...CAGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCATAGATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTGTGAGGGCCAGCAGCTaGTGGAGTCGAGGATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LCIDGPSATEQQPTGKGPVRASS*WSRGWP Trigger: GGGCCATCCTCGACTCCACCAGCTGCTGGCCCTCAC...AGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATCTATGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR TCA 90 bp | CAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTGAACTGTAGCACAGCCTaGGCCACGAACATGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: QPQSSSPLVRGLAPSLALNCSTA*ATNMST Trigger: GGTGGACATGTTCGTGGCTCAGGCTGTGCTACAGTT...CAGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR TCA 90 bp | TCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTGCTCTTTCCATAATGTaGGGGCCAGCAGCTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SATEQQPTGKGPCAQPGTALSIM*GPAAGG Trigger: TCCACCAGCTGCTGGCCCTCACATTATGGAAAGAGC...AGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR TCA 90 bp | TCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTAACTGTAGCACAGCCTaGGCCACGAACATGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: SATEQQPTGKGPCAQPGTNCSTA*ATNMST Trigger: GGTGGACATGTTCGTGGCTCAGGCTGTGCTACAGTT...AGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR TCA 90 bp | GGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCCTCTTCCTGCTCTaGGGAGCCCATGAGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GTRLASRSWALLLVLATQPLFLL*GAHEAA Trigger: AGCAGCCTCATGGGCTCCTCAGAGCAGGAAGAGGGG...CTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS-3UTR CCA 90 bp | ACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCGGTACTCGTTGTACATaGGGTCCCTCCGCAGGGACG | + |
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Preference number: 4 (lower is better) Translates to: TIGQQKLGLALGPGHTALGTRCT*GPSAGT Trigger: CGTCCCTGCGGAGGGACCCCATGTACAACGAGTACC...GAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTGCTGTTCTGCTGGCCATaGCTGAAGAAGAGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPQSSSPLVRGLAPSLALLFCWP*LKKSNA Trigger: AGCATTGCTCTTCTTCAGTCATGGCCAGCAGAACAG...CAGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCAGCTCTGAGGAGCCCATaGGGCTGCTCAGCAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKEHDWPAEAGPCSWSWPALRSP*GCSAGS Trigger: GGAACCTGCTGAGCAGCCTCATGGGCTCCTCAGAGC...TGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | GGCATGCCATGGCTGCACTGGACACAGGAGAAGGGGTACCAGTCACTGACGCCAGGTACTCGTTGTACATaGGGTCCCTCCGCAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GMPWLHWTQEKGYQSLTPGTRCT*GPSAGT Trigger: CGTCCCTGCGGAGGGACCCCATGTACAACGAGTACC...TGGCGTCAGTGACTGGTACCCCTTCTCCTGTGTCCAGTGCAGCCATGGCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGACTCTGCATAGATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTTGGTGGAGTCGAGGATaGCCCAGTTTCCCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDRLCIDGPSATEQQPTGWWSRG*PSFPDP Trigger: AGGGTCTGGGAAACTGGGCCATCCTCGACTCCACCA...ACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATCTATGCAGAGTCTGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCAGGGCTGCTGTCATCCTaGCTCTCTTCCCCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKEHDWPAEAGPCSWSWPGLLSS*LSSPSS Trigger: GGAAGAGGGGGAAGAGAGCCAGGATGACAGCAGCCC...TGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| 3UTR CAA 72 bp | TCTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTaGCTCTTGGTCCTGGCCACACAGCCCTCAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: SEGTRLASRSWA*LLVLATQPSTT Trigger: GGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR TCA 90 bp | GATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAAGCTCTTTCCATAATGTaGGGGCCAGCAGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DWPAEAGPCSWSWPHSPQALSIM*GPAAGG Trigger: TCCACCAGCTGCTGGCCCTCACATTATGGAAAGAGC...TTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGCGCCCAGCCTGGCACTGAATCCGTCCCAGCGGTGCCGGCCATGGACATCTCCTCGATGGATGGATaGTTCTGTGTGTACGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PCAQPGTESVPAVPAMDISSMDG*FCVYVV Trigger: TACAACGTACACACAGAAGCATCCATCCATCGAGGA...GATGTCCATGGCCGGCACCGCTGGGACGGATTCAGTGCCAGGCTGGGCGCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR GCA 90 bp | GACAAGGATGGCAGCGGGTGCTGCAGCAAGGGCTGCGCTTTATTGTGGGTGATCTCTTCCCCCTCTTCCTaGTCTGAGGAGCCCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKDGSGCCSKGCALLWVISSPSS*SEEPMR Trigger: CCTCATGGGCTCCTCAGAGCAGGAAGAGGGGGAAGA...GATCACCCACAATAAAGCGCAGCCCTTGCTGCAGCACCCGCTGCCATCCTTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCTCTTCCCCCTCTTCCTaGTCTGAGGAGCCCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEGTRLASRSWALLLVLASSPSS*SEEPMR Trigger: CCTCATGGGCTCCTCAGAGCAGGAAGAGGGGGAAGA...GGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCCCAGCTCGATGGGGCTaGTGTCATCCTGGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEGTRLASRSWALLLVLAPARWG*CHPGSL Trigger: AAGAGAGCCAGGATGACAGCAGCCCCATCGAGCTGG...GGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAGCCCTCCCCAAGGAAGCAGAGACAAGGATGGCAGCGGGTGCTGCAGCACCACTTCAGGGCTCTaGACACAAAAGCTACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCSPPQGSRDKDGSGCCSTTSGL*TQKLLV Trigger: AACGAGTAGCTTTTGTGTCCAGAGCCCTGAAGTGGT...GCTGCAGCACCCGCTGCCATCCTTGTCTCTGCTTCCTTGGGGAGGGCTGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
||
| CDS-3UTR TCA 90 bp | CCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACCACCATACATAAATAGGGACGCTCGCACAGCACCGTaGAGACAGCCAGCTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PCSWSWPHSPQPPYINRDARTAP*RQPACH Trigger: GTGGCAAGCTGGCTGTCTTCACGGTGCTGTGCGAGC...GTCCCTATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACCACCATACATAAATGGGCTGCTGTCATCCTaGCTCTCTTCCCCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPCSWSWPHSPQPPYINGLLSS*LSSPSS Trigger: GGAAGAGGGGGAAGAGAGCCAGGATGACAGCAGCCC...ATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR TCA 90 bp | GATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACTGTTCTGCTGGCCATaGCTGAAGAAGAGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: DWPAEAGPCSWSWPHSPQLFCWP*LKKSNA Trigger: AGCATTGCTCTTCTTCAGTCATGGCCAGCAGAACAG...TTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGTCGTTCAGGAGAATTTaGATCCATCAAACTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: DGPSATEQQPTGKGPCAQSFRRI*IHQTEH Trigger: GTGTTCAGTTTGATGGATCCAAATTCTCCTGAACGA...CTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGACTCTGCATAGATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTCCCATCCTCGATGGATaGATGCTTCTGTGTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: RDRLCIDGPSATEQQPTGPILDG*MLLCVR Trigger: ACGTACACACAGAAGCATCCATCCATCGAGGATGGG...ACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATCTATGCAGAGTCTGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACCACCATACATAAATGAAGAGCAATGCTCCTaGGTACATAAGCTCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGPCSWSWPHSPQPPYINEEQCS*VHKLPG Trigger: GCCCGGGAGCTTATGTACTCAGGAGCATTGCTCTTC...ATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACCACCATACATAAATAGGGACTGGTGGAGTCGAGGATaGCCCAGTTTCCCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PCSWSWPHSPQPPYINRDWWSRG*PSFPDP Trigger: AGGGTCTGGGAAACTGGGCCATCCTCGACTCCACCA...GTCCCTATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACCACCATACATAAAGCGGCCCATCCTCGATaGATGGATGCTTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SWALLLVLATQPSTTIHKAAHPR*MDASVC Trigger: ACACACAGAAGCATCCATCCATCGAGGATGGGCCGC...TTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR GCA 90 bp | GATGGCCCCTCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGTGTAAAGACCACCAGTaGACTGTTCTTATTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DGPSATEQQPTGKGPCAQCKDHQ*TVLIFQ Trigger: TTGAAAAATAAGAACAGTGCACTGGTGGTCTTTACA...CTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGAGGGGCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR GCA 90 bp | GGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGTCCTCGATGGATGGATaGTTCTGTGTGTACGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTRLASRSWALLLVLATQSSMDG*FCVYVV Trigger: TACAACGTACACACAGAAGCATCCATCCATCGAGGA...CTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACCACCATACATAAATATTCGAGGACCAGCATaGACAGGTCAGCTGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPCSWSWPHSPQPPYINIRGPA*TGQLHC Trigger: ACAGTGCAGCTGACCTGTCCATGCTGGTCCTCGAAT...ATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCAACCACTTCAGGGCTCTaGACACAAAAGCTACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKEHDWPAEAGPCSWSWPTTSGL*TQKLLV Trigger: AACGAGTAGCTTTTGTGTCCAGAGCCCTGAAGTGGT...TGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR TCA 90 bp | CCACCATACATAAATAGGGACAGACTCTGCATAGATGGCCCCTCAGCCACAGAGGAAGAGCAATGCTCCTaGGTACATAAGCTCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPYINRDRLCIDGPSATEEEQCS*VHKLPG Trigger: GCCCGGGAGCTTATGTACTCAGGAGCATTGCTCTTC...CTCTGTGGCTGAGGGGCCATCTATGCAGAGTCTGTCCCTATTTATGTATGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAACCACCATACATAAATCCCATCCTCGATGGATaGATGCTTCTGTGTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPCSWSWPHSPQPPYINPILDG*MLLCVR Trigger: ACGTACACACAGAAGCATCCATCCATCGAGGATGGG...ATTTATGTATGGTGGTTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | CCACCATACATAAATAGGGACAGACTCTGCATAGATGGCCCCTCAGCCACAGAGATTCGAGGACCAGCATaGACAGGTCAGCTGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPYINRDRLCIDGPSATEIRGPA*TGQLHC Trigger: ACAGTGCAGCTGACCTGTCCATGCTGGTCCTCGAAT...CTCTGTGGCTGAGGGGCCATCTATGCAGAGTCTGTCCCTATTTATGTATGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | GGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGTCGTTCAGGAGAATTTaGATCCATCAAACTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRLASRSWALLLVLATQSFRRI*IHQTEH Trigger: GTGTTCAGTTTGATGGATCCAAATTCTCCTGAACGA...CTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR GCA 90 bp | GGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGTGTAAAGACCACCAGTaGACTGTTCTTATTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTRLASRSWALLLVLATQCKDHQ*TVLIFQ Trigger: TTGAAAAATAAGAACAGTGCACTGGTGGTCTTTACA...CTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGAAGCACACCATGATTGCAAAACAACTCTGTGTCCAAACAAAATCCCAGCGGCCCATCCTCGATaGATGGATGCTTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWEAHHDCKTTLCPNKIPAAHPR*MDASVC Trigger: ACACACAGAAGCATCCATCCATCGAGGATGGGCCGC...TGGGATTTTGTTTGGACACAGAGTTGTTTTGCAATCATGGTGTGCTTCCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTTGAAAAATCCTCACCCAGTAAAAATAAATACTGCAACACGAAGGACGTCTGCATGTTTGCTCTaGGACATGTATCTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKLKNPHPVKINTATRRTSACLL*DMYLKK Trigger: CTTCTTCAGATACATGTCTCAGAGCAAACATGCAGA...CGTCCTTCGTGTTGCAGTATTTATTTTTACTGGGTGAGGATTTTTCAACTTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
||
| CDS TCA 90 bp | TGGGGTCCCTCCGCAGGGACGGCTGGTACTGCTCGCACAGCACCGTaGAGACAGCCAGCTTGCCACCGTCCACGGCCAGCAGCAGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: WGPSAGTAGTARTAP*RQPACHRPRPAAET Trigger: GGTTTCTGCTGCTGGCCGTGGACGGTGGCAAGCTGGCTGTCTTCACGGTGCTGTGCGAGCAGTACCAGCCGTCCCTGCGGAGGGACCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCACAGAGCAGCAGCCCACTGGTAAGGGGCCTTGCGCCCAGCCTGGCACTGTGAAGACAGCCAGCTaGCCACCGTCCACGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SATEQQPTGKGPCAQPGTVKTAS*PPSTAS Trigger: GCTGGCCGTGGACGGTGGCAAGCTGGCTGTCTTCAC...AGTGCCAGGCTGGGCGCAAGGCCCCTTACCAGTGGGCTGCTGCTCTGTGGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS GCA 90 bp | AGGTACTCGTTGTACATGGGGTCCCTCCGCAGGGACGGCTGGTACTaGTCGCACAGCACCGTGAAGACAGCCAGCTTGCCACCGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RYSLYMGSLRRDGWY*SHSTVKTASLPPST Trigger: CGTGGACGGTGGCAAGCTGGCTGTCTTCACGGTGCTGTGCGAGCAGTACCAGCCGTCCCTGCGGAGGGACCCCATGTACAACGAGTACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS CCA 90 bp | CTGTCGAGGTACTCGTTGTACATGGGGTCCCTCCGCAGGGACGGCTaGTACTGCTCGCACAGCACCGTGAAGACAGCCAGCTTGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LSRYSLYMGSLRRDG*YCSHSTVKTASLPP Trigger: CGGTGGCAAGCTGGCTGTCTTCACGGTGCTGTGCGAGCAGTACCAGCCGTCCCTGCGGAGGGACCCCATGTACAACGAGTACCTCGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CAA 90 bp | CCACCATACATAAATAGGGACAGACTCTGCATAGATGGCCCCTCAGCCACAGAGCGGTTGCGGGCGCCGTaGCGGGCGCCCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPYINRDRLCIDGPSATERLRAP*RAPSCS Trigger: AGAGCAGGAGGGCGCCCGCAACGGCGCCCGCAACCG...CTCTGTGGCTGAGGGGCCATCTATGCAGAGTCTGTCCCTATTTATGTATGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
||
| CDS-3UTR CAA 90 bp | GGCATGCCATGGCTGCACTGGACACAGGAGAAGGGGTACCAGTCACTGACGCCATACTCGACCAGCATGTaGGCGCAGCCCTCGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GMPWLHWTQEKGYQSLTPYSTSM*AQPSPS Trigger: TGATGGCGAGGGCTGCGCCAACATGCTGGTCGAGTA...TGGCGTCAGTGACTGGTACCCCTTCTCCTGTGTCCAGTGCAGCCATGGCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
||
| CDS-3UTR CAA 90 bp | GATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACACAGCCCTCAATACTCGACCAGCATGTaGGCGCAGCCCTCGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DWPAEAGPCSWSWPHSPQYSTSM*AQPSPS Trigger: TGATGGCGAGGGCTGCGCCAACATGCTGGTCGAGTA...TTGAGGGCTGTGTGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGAACACGATTGGCCAGCAGAAGCTGGGCCTTGCTCTTGGTCCTGGCCACTGTCGAGGTACTCGTaGTACATGGGGTCCCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKEHDWPAEAGPCSWSWPLSRYS*YMGSLR Trigger: GCGGAGGGACCCCATGTACAACGAGTACCTCGACAG...TGGCCAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS TCA 90 bp | TGTCATCCTGGCTCTCTTCCCCCTCTTCCTGCTCTGAGGAGCCCATaGGGCTGCTCAGCAGGTTCCCTAGCAAGCCTCCATAGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CHPGSLPPLPALRSP*GCSAGSLASLHRRM Trigger: CATCCTCCTATGGAGGCTTGCTAGGGAACCTGCTGAGCAGCCTCATGGGCTCCTCAGAGCAGGAAGAGGGGGAAGAGAGCCAGGATGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
||
| CDS CCA 90 bp | GCAGCTGGTGGAGTCGAGGATGGCCCAGTTTCCCAGACCCTCCACTaGACCACTTCAGGGCTCTGGACACAAAAGCTACTCGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAGGVEDGPVSQTLH*TTSGLWTQKLLVQE Trigger: CTCCTGAACGAGTAGCTTTTGTGTCCAGAGCCCTGAAGTGGTCCAGTGGAGGGTCTGGGAAACTGGGCCATCCTCGACTCCACCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
||
| CDS CCA 90 bp | TGCTCTTTCCATAATGTGAGGGCCAGCAGCTGGTGGAGTCGAGGATaGCCCAGTTTCCCAGACCCTCCACTGGACCACTTCAGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSFHNVRASSWWSRG*PSFPDPPLDHFRAL Trigger: CAGAGCCCTGAAGTGGTCCAGTGGAGGGTCTGGGAAACTGGGCCATCCTCGACTCCACCAGCTGCTGGCCCTCACATTATGGAAAGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
||
| CDS TCA 90 bp | CCGTCCACGGCCAGCAGCAGAAACCAGATGAAATTGAGCAGGGGCTaGACAAAGGGCGGCCCATCCTCGATGGATGGATGCTTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTASSRNQMKLSRG*TKGGPSSMDGCFCV Trigger: CACACAGAAGCATCCATCCATCGAGGATGGGCCGCCCTTTGTTCAGCCCCTGCTCAATTTCATCTGGTTTCTGCTGCTGGCCGTGGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000138508.8 |
||
| CDS-3UTR CAA 90 bp | CCACCATACATAAATAGGGACAGACTCTGCATAGATGGCCCCTCAGCCACAGAGGTGAAGACAGCCAGCTaGCCACCGTCCACGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPYINRDRLCIDGPSATEVKTAS*PPSTAS Trigger: GCTGGCCGTGGACGGTGGCAAGCTGGCTGTCTTCAC...CTCTGTGGCTGAGGGGCCATCTATGCAGAGTCTGTCCCTATTTATGTATGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS TCA 90 bp | AGCTGCACTGTTCTGCTGGCCATGACTGAAGAAGAGCAATGCTCCTaGGTACATAAGCTCCCGGGCCTCTGCATGTTTGCTCTGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: SCTVLLAMTEEEQCS*VHKLPGLCMFALRH Trigger: ATGTCTCAGAGCAAACATGCAGAGGCCCGGGAGCTTATGTACTCAGGAGCATTGCTCTTCTTCAGTCATGGCCAGCAGAACAGTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS TCA 90 bp | GTCAGCTGCACTGTTCTGGCCATGACTGAAGAAGAGCAATGCTCCTaGGTACATAAGCTCCCGGGCCTCTGCATGTTTGCTCTGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: VSCTVLAMTEEEQCS*VHKLPGLCMFALRH Trigger: ATGTCTCAGAGCAAACATGCAGAGGCCCGGGAGCTTATGTACTCAGGAGCATTGCTCTTCTTCAGTCATGGCCAGAACAGTGCAGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS CCA 90 bp | GATGGCCCAGTTTCCCAGACCCTCCACTGGACCACTTCAGGGCTCTaGACACAAAAGCTACTCGTTCAGGAGAATTTGGATCCATCAAAC | + |
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Preference number: 5 (lower is better) Translates to: DGPVSQTLHWTTSGL*TQKLLVQENLDPSN Trigger: GTTTGATGGATCCAAATTCTCCTGAACGAGTAGCTTTTGTGTCCAGAGCCCTGAAGTGGTCCAGTGGAGGGTCTGGGAAACTGGGCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS CCA 90 bp | GAAATTGAGCAGGGGCTGAACAAAGGGCGGCCCATCCTCGATGGATaGATGCTTCTGTGTGTACGTTGTAAAGACCACCAGTGCACTGTT | + |
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Preference number: 5 (lower is better) Translates to: EIEQGLNKGRPILDG*MLLCVRCKDHQCTV Trigger: AACAGTGCACTGGTGGTCTTTACAACGTACACACAGAAGCATCCATCCATCGAGGATGGGCCGCCCTTTGTTCAGCCCCTGCTCAATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS TCA 90 bp | GAAAGTGATACCGAGACTCACAGTAATTTTGCTCTTTCCATAATGTaGGGGCCAGCAGCTGGTGGAGTCGAGGATGGCCCAGTTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ESDTETHSNFALSIM*GPAAGGVEDGPVSQ Trigger: CTGGGAAACTGGGCCATCCTCGACTCCACCAGCTGCTGGCCCTCACATTATGGAAAGAGCAAAATTACTGTGAGTCTCGGTATCACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS-3UTR CAA 90 bp | GTTAAGTTGAAAAATCCTCACCCAGTAAAAATAAATACTGCAACACGAAGGACGCTGTCGAGGTACTCGTaGTACATGGGGTCCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: VKLKNPHPVKINTATRRTLSRYS*YMGSLR Trigger: GCGGAGGGACCCCATGTACAACGAGTACCTCGACAG...CGTCCTTCGTGTTGCAGTATTTATTTTTACTGGGTGAGGATTTTTCAACTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026976.12 |
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| CDS CCA 72 bp | TTCTCGACGCTAGCACGCAGCTTGCCCTCCACGCGCTaGACGCCGCCGCGGTTGCGGGCGCCGTTGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: FSTLARSLPSTR*TPPRLRAPLRA Trigger: CGCCCGCAACGGCGCCCGCAACCGCGGCGGCGTCCAGCGCGTGGAGGGCAAGCTGCGTGCTAGCGTCGAGAA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000130326.8 |
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| CDS TCA 72 bp | TCCGCAGGGACGGCTGGTACTGCTCGCACAGCACCGTaGAGACAGCCAGCTTGCCACCGTCCACGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SAGTAGTARTAP*RQPACHRPRPA Trigger: TGCTGGCCGTGGACGGTGGCAAGCTGGCTGTCTTCACGGTGCTGTGCGAGCAGTACCAGCCGTCCCTGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS GCA 72 bp | TTGTACATGGGGTCCCTCCGCAGGGACGGCTGGTACTaGTCGCACAGCACCGTGAAGACAGCCAGCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LYMGSLRRDGWY*SHSTVKTASLP Trigger: TGGCAAGCTGGCTGTCTTCACGGTGCTGTGCGAGCAGTACCAGCCGTCCCTGCGGAGGGACCCCATGTACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS CCA 72 bp | TACTCGTTGTACATGGGGTCCCTCCGCAGGGACGGCTaGTACTGCTCGCACAGCACCGTGAAGACAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: YSLYMGSLRRDG*YCSHSTVKTAS Trigger: GCTGGCTGTCTTCACGGTGCTGTGCGAGCAGTACCAGCCGTCCCTGCGGAGGGACCCCATGTACAACGAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS CCA 72 bp | AGAGTTGTCCGATCCTGTCGAGGTACTCGTTGTACATaGGGTCCCTCCGCAGGGACGGCTGGTACTGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RVVRSCRGTRCT*GPSAGTAGTAR Trigger: GCGAGCAGTACCAGCCGTCCCTGCGGAGGGACCCCATGTACAACGAGTACCTCGACAGGATCGGACAACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS CAA 72 bp | CGGAAGCCTCGGGCAGTAGAGTACTCGACCAGCATGTaGGCGCAGCCCTCGCCATCACTGGAGTGCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RKPRAVEYSTSM*AQPSPSLECRK Trigger: CTTTCTGCACTCCAGTGATGGCGAGGGCTGCGCCAACATGCTGGTCGAGTACTCTACTGCCCGAGGCTTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS CCA 72 bp | CCACCTCGGCCTTTTCCAGGGATTCGAGGACCAGCATaGACAGGTCAGCTGCACTGTTCTGCTGGCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: PPRPFPGIRGPA*TGQLHCSAGHD Trigger: GTCATGGCCAGCAGAACAGTGCAGCTGACCTGTCCATGCTGGTCCTCGAATCCCTGGAAAAGGCCGAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS CAA 90 bp | GCCTCCATAGGAGGATGTCTGCTTTGGCGGCACACCGAAGAAGAGTaGTCCGATCCTGTCGAGGTACTCGTTGTACATGGGGTCCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ASIGGCLLWRHTEEE*SDPVEVLVVHGVPP Trigger: CGGAGGGACCCCATGTACAACGAGTACCTCGACAGGATCGGACAACTCTTCTTCGGTGTGCCGCCAAAGCAGACATCCTCCTATGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS CCA 72 bp | GGAGTCGAGGATGGCCCAGTTTCCCAGACCCTCCACTaGACCACTTCAGGGCTCTGGACACAAAAGCTACTC | + |
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Preference number: 6 (lower is better) Translates to: GVEDGPVSQTLH*TTSGLWTQKLL Trigger: GAGTAGCTTTTGTGTCCAGAGCCCTGAAGTGGTCCAGTGGAGGGTCTGGGAAACTGGGCCATCCTCGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS TCA 72 bp | CCCGGGCCTCTGCATGTTTGCTCTGAGACATGTATCTaGAGAAGAGGGTCCGGTACATCTGGTGCGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PGPLHVCSETCI*RRGSGTSGAPR Trigger: ACGAGGCGCACCAGATGTACCGGACCCTCTTCTTCAGATACATGTCTCAGAGCAAACATGCAGAGGCCCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000130326.8 |
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| CDS TCA 72 bp | GCCAGCAGCAGAAACCAGATGAAATTGAGCAGGGGCTaGACAAAGGGCGGCCCATCCTCGATGGATGGATGC | + |
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Preference number: 6 (lower is better) Translates to: ASSRNQMKLSRG*TKGGPSSMDGC Trigger: GCATCCATCCATCGAGGATGGGCCGCCCTTTGTTCAGCCCCTGCTCAATTTCATCTGGTTTCTGCTGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS CAA 90 bp | TGCTCAGCAGGTTCCCTAGCAAGCCTCCATAGGAGGATGTCTGCTTaGGCGGCACACCGAAGAAGAGTTGTCCGATCCTGTCGAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: CSAGSLASLHRRMSA*AAHRRRVVRSCRGT Trigger: AGTACCTCGACAGGATCGGACAACTCTTCTTCGGTGTGCCGCCAAAGCAGACATCCTCCTATGGAGGCTTGCTAGGGAACCTGCTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS CCA 72 bp | CAGGGGCTGAACAAAGGGCGGCCCATCCTCGATGGATaGATGCTTCTGTGTGTACGTTGTAAAGACCACCAG | + |
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Preference number: 6 (lower is better) Translates to: QGLNKGRPILDG*MLLCVRCKDHQ Trigger: CTGGTGGTCTTTACAACGTACACACAGAAGCATCCATCCATCGAGGATGGGCCGCCCTTTGTTCAGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS CAA 72 bp | GGAGGATGTCTGCTTTGGCGGCACACCGAAGAAGAGTaGTCCGATCCTGTCGAGGTACTCGTTGTACATGGG | + |
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Preference number: 6 (lower is better) Translates to: GGCLLWRHTEEE*SDPVEVLVVHG Trigger: CCCATGTACAACGAGTACCTCGACAGGATCGGACAACTCTTCTTCGGTGTGCCGCCAAAGCAGACATCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS CCA 72 bp | ACTCGACCAGCATGTTGGCGCAGCCCTCGCCATCACTaGAGTGCAGAAAGTGATACCGAGACTCACAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: TRPACWRSPRHH*SAESDTETHSN Trigger: ATTACTGTGAGTCTCGGTATCACTTTCTGCACTCCAGTGATGGCGAGGGCTGCGCCAACATGCTGGTCGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 ENSMUST00000130326.8 ENSMUST00000138508.8 |
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| CDS TCA 72 bp | GTTCTGCTGGCCATGACTGAAGAAGAGCAATGCTCCTaGGTACATAAGCTCCCGGGCCTCTGCATGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VLLAMTEEEQCS*VHKLPGLCMFA Trigger: AGCAAACATGCAGAGGCCCGGGAGCTTATGTACTCAGGAGCATTGCTCTTCTTCAGTCATGGCCAGCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026976.12 ENSMUST00000110878.2 |
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| CDS TCA 72 bp | ACTGTTCTGGCCATGACTGAAGAAGAGCAATGCTCCTaGGTACATAAGCTCCCGGGCCTCTGCATGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TVLAMTEEEQCS*VHKLPGLCMFA Trigger: AGCAAACATGCAGAGGCCCGGGAGCTTATGTACTCAGGAGCATTGCTCTTCTTCAGTCATGGCCAGAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130326.8 ENSMUST00000138508.8 |
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