Pregenerated sensors for GET3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052456Ensembl transcript IDs: ENSMUST00000064314.10, ENSMUST00000209834.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGGCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTaGGTGTATGGCCGGTGGGTGCTGTGTCGAACACTACCACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GGPGPSPRWSGSSGA*VYGRWVLCRTLPLR Trigger: TCTCAGTGGTAGTGTTCGACACAGCACCCACCGGCCATACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCGGCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTACTCGTCGGGGAGCTCTaGAACGCCCAGGCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: RRPRPLSTMVGKFRSLSVLVGEL*NAQAGV Trigger: GACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAG...TACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGCCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCGGCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTATCATGGCTTCATCGATaGCAGGGAAGGCGCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: RRPRPLSTMVGKFRSLSVSWLHR*QGRRSW Trigger: CCATGAGCGCCTTCCCTGGCATCGATGAAGCCATGA...TACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGCCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATCAGGCGGCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGCTTTCACCAGCCTCATaGCCTCAGCATAACTCATGG | + |
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Preference number: 2 (lower is better) Translates to: CIRRPRPLSTMVGKFRSLLSPAS*PQHNSW Trigger: CCATGAGTTATGCTGAGGTCATGAGGCTGGTGAAAG...CAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGCCGCCTGATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTATGGCCGTCGAACACTACCACTaGGAAGTTCATGCCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: AQAPLHDGREVQEPECMAVEHYH*EVHAFH Trigger: GTGAAAGGCATGAACTTCTCAGTGGTAGTGTTCGAC...GGCCATACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTATGGCCGGTGGGTCCTCAGCATAACTCATaGCTTCATCGATGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PLSTMVGKFRSLSVWPVGPQHNS*LHRCQG Trigger: TCCCTGGCATCGATGAAGCCATGAGTTATGCTGAGG...ACCCACCGGCCATACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTATGGCCTCATCTTCTTGCCCATaGTCAGCATGTTGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: AQAPLHDGREVQEPECMASSSCP*SACCLP Trigger: AGGAAGACAACATGCTGAGCATGGGCAAGAAGATGA...GGCCATACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| 3UTR TCA 72 bp | GGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTaGGTGTATGGCCGGTGGGTGCTGTGTCGAACACTA | + |
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Preference number: 3 (lower is better) Translates to: GPSPRWSGSSGA*VYGRWVLCRTL Trigger: TAGTGTTCGACACAGCACCCACCGGCCATACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR CCA 90 bp | CGAAGAACTCGTCGGGGAGCTCTGCAACGCCCAGGCTGGGGTCTATCTCCTGGGCGTCCCTTCGACAGCTaGACTGCCAGGCTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RRTRRGALQRPGWGLSPGRPFDS*TARLQL Trigger: CAGCTGCAGCCTGGCAGTCCAGCTGTCGAAGGGACG...CCCAGGAGATAGACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAGTTCTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR GCA 90 bp | GAAGAACTCGTCGGGGAGCTCTGCAACGCCCAGGCTGGGGTCTATCTCCTGGGGCTTCGACAGCTGGACTaGCAGGCTGCAGCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: EELVGELCNAQAGVYLLGLRQLD*QAAAAG Trigger: ACCTGCAGCTGCAGCCTGGCAGTCCAGCTGTCGAAG...CCCCAGGAGATAGACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAGTTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR GCA 90 bp | GAAGAACTCGTCGGGGAGCTCTGCAACGCCCAGGCTGGGGTCTATCTCCTGGGGTACCAACGCCACCCTTaGCCCCGACGAAGATCCACT | + |
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Preference number: 4 (lower is better) Translates to: EELVGELCNAQAGVYLLGYQRHP*PRRRST Trigger: AGTGGATCTTCGTCGGGGGCAAGGGTGGCGTTGGTA...CCCCAGGAGATAGACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAGTTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR GCA 90 bp | GCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTATGGCCCGGCTCCACATCAGGTaGATCCTCGAACTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AQAPLHDGREVQEPECMARLHIR*ILELFC Trigger: GCAGAAGAGTTCGAGGATGCACCTGATGTGGAGCCG...GGCCATACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR GCA 90 bp | GACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCCTCGTCGGGGAGCTCTaGAACGCCCAGGCTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: DFVQTLPHGERGGYEGSSLVGEL*NAQAGV Trigger: GACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAG...GCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | TTCCTCGAAGAACTCGTCGGGGAGCTCTGCAACGCCCAGGCTGGGGTCTATCTCGGCTGCAGCTGCAGGTaGTCTTACCAACGCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: FLEELVGELCNAQAGVYLGCSCR*SYQRHP Trigger: AGGGTGGCGTTGGTAAGACCACCTGCAGCTGCAGCC...GAGATAGACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAGTTCTTCGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR TCA 90 bp | TGCATCAGGCGGCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGCTGGGTCTGTGGAAATaGTCAGAACACTCTCACGTC | + |
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Preference number: 4 (lower is better) Translates to: CIRRPRPLSTMVGKFRSLLGLWK*SEHSHV Trigger: GACGTGAGAGTGTTCTGATCATTTCCACAGACCCAG...CAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGCCGCCTGATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR TCA 90 bp | CGAAGAACTCGTCGGGGAGCTCTGCAACGCCCAGGCTGGGGTCTATCTCCTGGGCTGGTCAAAAGCATCTaGGATGTTGTGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RRTRRGALQRPGWGLSPGLVKSI*DVVSWV Trigger: GACCCAGCTCACAACATCTCAGATGCTTTTGACCAG...CCCAGGAGATAGACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAGTTCTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR GCA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCGCTGGACTGCCAGGCTaGAGCTGCAGGTGGTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LPPPKWPPALWGTLCKLCAGLPG*SCRWSY Trigger: GTAAGACCACCTGCAGCTGCAGCCTGGCAGTCCAGC...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCGGCTGCAGCTGCAGGTaGTCTTACCAACGCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: SHLLSGPLHYGGLCANSAGCSCR*SYQRHP Trigger: AGGGTGGCGTTGGTAAGACCACCTGCAGCTGCAGCC...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | GACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCCGTCCCTTCGACAGCTaGACTGCCAGGCTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: DFVQTLPHGERGGYEGSSRPFDS*TARLQL Trigger: CAGCTGCAGCCTGGCAGTCCAGCTGTCGAAGGGACG...GCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | GACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCCACTTAGCCAGCTCCTaGATCAGCCGCTCCGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: DFVQTLPHGERGGYEGSSHLASS*ISRSVS Trigger: CGAGACGGAGCGGCTGATCCAGGAGCTGGCTAAGTG...GCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | TGCATCAGGCGGCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGGGTCTGTCCCATCAGTaGTTTAACCATAGCAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CIRRPRPLSTMVGKFRSLGLSHQ*FNHSKE Trigger: CTCTTTGCTATGGTTAAACCACTGATGGGACAGACC...CAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGCCGCCTGATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR TCA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCAGGAAGTTCAGGAGCCTaGGTGTATGGCCGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLCKLCPMGKEEGMKAAAGSSGA*VYGRWV Trigger: CACCCACCGGCCATACACTCAGGCTCCTGAACTTCC...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR GCA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCCGGCTCCACATCAGGTaGATCCTCGAACTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHLLSGPLHYGGLCANSARLHIR*ILELFC Trigger: GCAGAAGAGTTCGAGGATGCACCTGATGTGGAGCCG...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR GCA 90 bp | GACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCTACCAACGCCACCCTTaGCCCCGACGAAGATCCACT | + |
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Preference number: 4 (lower is better) Translates to: DFVQTLPHGERGGYEGSSYQRHP*PRRRST Trigger: AGTGGATCTTCGTCGGGGGCAAGGGTGGCGTTGGTA...GCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR GCA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCACTTCGACAGCTGGACTaGCAGGCTGCAGCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TLCKLCPMGKEEGMKAAALRQLD*QAAAAG Trigger: ACCTGCAGCTGCAGCCTGGCAGTCCAGCTGTCGAAG...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR GCA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCGGGCCTCACACATCTTaGAGGGTTTCTCAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SHLLSGPLHYGGLCANSAGPHTS*RVSQGQ Trigger: CTGACCCTGAGAAACCCTGCAAGATGTGTGAGGCCC...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCAAGGAGCCTGAGTGTATaGCCGGTGGGTGCTGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TLCKLCPMGKEEGMKAAARSLSV*PVGAVS Trigger: CGACACAGCACCCACCGGCCATACACTCAGGCTCCT...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCTCCAGGTACTTGGCCTaGATCTTGTGTCGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPPPKWPPALWGTLCKLCSRYLA*ILCRAS Trigger: TGAGGCCCGACACAAGATCCAGGCCAAGTACCTGGA...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR GCA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCAATCTGGTTCTTGATCTaGATCAGGCGGCCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TLCKLCPMGKEEGMKAAAIWFLI*IRRPRP Trigger: GGGCCTGGGCCGCCTGATGCAGATCAAGAACCAGAT...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR TCA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCCTGGGTCTGTGGAAATaGTCAGAACACTCTCACGTC | + |
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Preference number: 4 (lower is better) Translates to: SHLLSGPLHYGGLCANSALGLWK*SEHSHV Trigger: GACGTGAGAGTGTTCTGATCATTTCCACAGACCCAG...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR TCA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCTGGTCAAAAGCATCTaGGATGTTGTGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LPPPKWPPALWGTLCKLCLVKSI*DVVSWV Trigger: GACCCAGCTCACAACATCTCAGATGCTTTTGACCAG...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR TCA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCATGTTGCACATCTGTaGGATGAAGGGGCTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: LPPPKWPPALWGTLCKLCHVAHL*DEGADL Trigger: CAGATCAGCCCCTTCATCTCACAGATGTGCAACATG...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR GCA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCATCATGGCTTCATCGATaGCAGGGAAGGCGCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: TLCKLCPMGKEEGMKAAASWLHR*QGRRSW Trigger: CCATGAGCGCCTTCCCTGGCATCGATGAAGCCATGA...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCCCTCAGCATAACTCATaGCTTCATCGATGCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SHLLSGPLHYGGLCANSAPQHNS*LHRCQG Trigger: TCCCTGGCATCGATGAAGCCATGAGTTATGCTGAGG...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| 3UTR CAA 72 bp | CTAACAGATCGGATGACAGGCAACGTCTCTTCTAGCTaGGAGGCCAGTTGGTCAGCATTCATGTCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LTDRMTGNVSSS*EASWSAFMSPR Trigger: CCTGGGGGACATGAATGCTGACCAACTGGCCTCCAAGCTAGAAGAGACGTTGCCTGTCATCCGATCTGTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR TCA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCGTCGAACACTACCACTaGGAAGTTCATGCCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LPPPKWPPALWGTLCKLCVEHYH*EVHAFH Trigger: GTGAAAGGCATGAACTTCTCAGTGGTAGTGTTCGAC...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR TCA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCACTTTCACCAGCCTCATaGCCTCAGCATAACTCATGG | + |
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Preference number: 4 (lower is better) Translates to: TLCKLCPMGKEEGMKAAALSPAS*PQHNSW Trigger: CCATGAGTTATGCTGAGGTCATGAGGCTGGTGAAAG...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR TCA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCGGCAGCTTTACAATGTaGAAGTCTTCATATAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LPPPKWPPALWGTLCKLCGSFTM*KSSYRS Trigger: AGACCTATATGAAGACTTTCACATTGTAAAGCTGCC...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR GCA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCATCATCTTCTTGCCCATaGTCAGCATGTTGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TLCKLCPMGKEEGMKAAASSSCP*SACCLP Trigger: AGGAAGACAACATGCTGAGCATGGGCAAGAAGATGA...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CAA 90 bp | AGGCGGCCCAGGCCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTATTACCAACGCCACCCTaGCCCCCGACGAAGATCCAC | + |
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Preference number: 5 (lower is better) Translates to: RRPRPLSTMVGKFRSLSVLPTPP*PPTKIH Trigger: GTGGATCTTCGTCGGGGGCAAGGGTGGCGTTGGTAA...TACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGGCCTGGGCCGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCTCCACGATGGTCGGGAAGTTCAGGAGCCTGAGTGTATGGCCGGTGGGTCGCTGCTCGATGATATaGCTAAGCGTGGGTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PLSTMVGKFRSLSVWPVGRCSMI*LSVGSS Trigger: GCTGGAACCCACGCTTAGCAATATCATCGAGCAGCG...ACCCACCGGCCATACACTCAGGCTCCTGAACTTCCCGACCATCGTGGAGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS-3UTR CAA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCGGGCTGATCTGGTTCTaGATCTGCATCAGGCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LPPPKWPPALWGTLCKLCGLIWF*ICIRRP Trigger: GGGCCGCCTGATGCAGATCAAGAACCAGATCAGCCC...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS GCA 90 bp | CCAACGCCACCCTTGCCCCCGACGAAGATCCACTTAAGGCTACGCTaGTCGATGATATTGCTAAGCGTGGGTTCCAGCGGCTCCACATCA | + |
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Preference number: 5 (lower is better) Translates to: PTPPLPPTKIHLRLR*SMILLSVGSSGSTS Trigger: TGATGTGGAGCCGCTGGAACCCACGCTTAGCAATATCATCGAGCAGCGTAGCCTTAAGTGGATCTTCGTCGGGGGCAAGGGTGGCGTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064314.10 ENSMUST00000209834.2 |
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| CDS-3UTR CAA 90 bp | GACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCTTACCAACGCCACCCTaGCCCCCGACGAAGATCCAC | + |
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Preference number: 5 (lower is better) Translates to: DFVQTLPHGERGGYEGSSLPTPP*PPTKIH Trigger: GTGGATCTTCGTCGGGGGCAAGGGTGGCGTTGGTAA...GCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CAA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCCGGGCCTCACACATCTaGCAGGGTTTCTCAGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SHLLSGPLHYGGLCANSARASHI*QGFSGS Trigger: TGACCCTGAGAAACCCTGCAAGATGTGTGAGGCCCG...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CAA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCAGGGCAGAGAAGGTGTaGACTTTGTCGGCTCCCCGA | + |
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Preference number: 5 (lower is better) Translates to: SHLLSGPLHYGGLCANSARAEKV*TLSAPR Trigger: TCGGGGAGCCGACAAAGTCAACACCTTCTCTGCCCT...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CAA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCCGCTGCTCGATGATATaGCTAAGCGTGGGTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SHLLSGPLHYGGLCANSARCSMI*LSVGSS Trigger: GCTGGAACCCACGCTTAGCAATATCATCGAGCAGCG...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CAA 90 bp | CTCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCGGGAAGACAAGCTGGTaGACGATGATGTTGTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LPPPKWPPALWGTLCKLCGKTSW*TMMLWV Trigger: CACCCACAACATCATCGTCAACCAGCTTGTCTTCCC...GCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CAA 90 bp | ACTTTGTGCAAACTCTGCCCCATGGGGAAAGAGGAGGGTATGAAGGCAGCAGCAAACGTCTCTTCTAGCTaGGAGGCCAGTTGGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TLCKLCPMGKEEGMKAAANVSSS*EASWSA Trigger: TGCTGACCAACTGGCCTCCAAGCTAGAAGAGACGTT...TGCTGCTGCCTTCATACCCTCCTCTTTCCCCATGGGGCAGAGTTTGCACAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS-3UTR CAA 90 bp | TCCCACCTCCTAAGTGGCCCCCTGCATTATGGGGGACTTTGTGCAAACTCTGCCGTCTGTTCAGGGTCCTaGAACTGTTCGCTAACAGAT | + |
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Preference number: 5 (lower is better) Translates to: SHLLSGPLHYGGLCANSAVCSGS*NCSLTD Trigger: ATCTGTTAGCGAACAGTTCAAGGACCCTGAACAGAC...GGCAGAGTTTGCACAAAGTCCCCCATAATGCAGGGGGCCACTTAGGAGGTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS GCA 72 bp | CCCTTGCCCCCGACGAAGATCCACTTAAGGCTACGCTaGTCGATGATATTGCTAAGCGTGGGTTCCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PLPPTKIHLRLR*SMILLSVGSSG Trigger: GCCGCTGGAACCCACGCTTAGCAATATCATCGAGCAGCGTAGCCTTAAGTGGATCTTCGTCGGGGGCAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064314.10 ENSMUST00000209834.2 |
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| CDS CAA 90 bp | TTGCCCCCGACGAAGATCCACTTAAGGCTACGCTGCTCGATGATATaGCTAAGCGTGGGTTCCAGCGGCTCCACATCAGGTGCATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LPPTKIHLRLRCSMI*LSVGSSGSTSGASS Trigger: CGAGGATGCACCTGATGTGGAGCCGCTGGAACCCACGCTTAGCAATATCATCGAGCAGCGTAGCCTTAAGTGGATCTTCGTCGGGGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064314.10 ENSMUST00000209834.2 |
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| CDS GCA 72 bp | CATGTTGTCTTCCTCGAAGAACTCGTCGGGGAGCTCTaGAACGCCCAGGCTGGGGTCTATCTCCATAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: HVVFLEELVGEL*NAQAGVYLHSK Trigger: TTTGCTATGGAGATAGACCCCAGCCTGGGCGTTGCAGAGCTCCCCGACGAGTTCTTCGAGGAAGACAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS CCA 72 bp | ATGTTGTGGGTGTCGATCTTGCACTTAGCCAGCTCCTaGATCAGCCGCTCCGTCTCGTACAAGGACAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: MLWVSILHLASS*ISRSVSYKDKN Trigger: ATTCTTGTCCTTGTACGAGACGGAGCGGCTGATCCAGGAGCTGGCTAAGTGCAAGATCGACACCCACAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS CAA 72 bp | ACGAAGATCCACTTAAGGCTACGCTGCTCGATGATATaGCTAAGCGTGGGTTCCAGCGGCTCCACATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TKIHLRLRCSMI*LSVGSSGSTSG Trigger: ACCTGATGTGGAGCCGCTGGAACCCACGCTTAGCAATATCATCGAGCAGCGTAGCCTTAAGTGGATCTTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064314.10 ENSMUST00000209834.2 |
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| CDS CAA 90 bp | AATTCGGCGATGCACACACAGATGAACGTTGTCTGTTCAGGGTCCTaGAACTGTTCGCTAACAGATCGGATGACAGGCAACGTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: NSAMHTQMNVVCSGS*NCSLTDRMTGNVSS Trigger: AGAAGAGACGTTGCCTGTCATCCGATCTGTTAGCGAACAGTTCAAGGACCCTGAACAGACAACGTTCATCTGTGTGTGCATCGCCGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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| CDS CCA 72 bp | CTCCAACCACATAGGATCCCGGGTCTGTCCCATCAGTaGTTTAACCATAGCAAAGAGGTTGTCATAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LQPHRIPGLSHQ*FNHSKEVVIAF Trigger: AAAGGCTATGACAACCTCTTTGCTATGGTTAAACCACTGATGGGACAGACCCGGGATCCTATGTGGTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209834.2 |
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| CDS CAA 72 bp | ATGCACACACAGATGAACGTTGTCTGTTCAGGGTCCTaGAACTGTTCGCTAACAGATCGGATGACAGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: MHTQMNVVCSGS*NCSLTDRMTGN Trigger: GTTGCCTGTCATCCGATCTGTTAGCGAACAGTTCAAGGACCCTGAACAGACAACGTTCATCTGTGTGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064314.10 |
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