Pregenerated sensors for GET1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023147Ensembl transcript IDs: ENSMUST00000023913.11, ENSMUST00000232832.2, ENSMUST00000233566.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCATCTGTTCTGGGCACTTCTGATTGCCCTTCCAAGTGGCCTTaGGATGCTGACCCAGGCTACCTAAACGATGTGGGCAAAAAGCGC | + |
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Preference number: 1 (lower is better) Translates to: EASVLGTSDCPSKWP*DADPGYLNDVGKKR Trigger: GCGCTTTTTGCCCACATCGTTTAGGTAGCCTGGGTCAGCATCCCAAGGCCACTTGGAAGGGCAATCAGAAGTGCCCAGAACAGATGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR GCA 90 bp | GCTGGCAACAGACCCAAGCCATGCCCAGAAACAAGCATCAGCAGATaGCACGTGGTGGTTCCCAGTTGGTATGAATCCAGACCTACATCA | + |
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Preference number: 1 (lower is better) Translates to: AGNRPKPCPETSISR*HVVVPSWYESRPTS Trigger: TGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGCTTGGGTCTGTTGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR GCA 90 bp | AGTTGTTACAAGTCTGACTCTGCAGCTGGCAACAGACCCAAGCCATaGCCAGAAACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: SCYKSDSAAGNRPKP*PETSISRCHVVVPS Trigger: ACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGCTTGGGTCTGTTGCCAGCTGCAGAGTCAGACTTGTAACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR GCA 90 bp | CTATCTGCAGCATCTGCGGAGTTTAAATCAATGGACTCTCAAGCCTaGTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACAC | + |
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Preference number: 1 (lower is better) Translates to: LSAASAEFKSMDSQA*SGGTRSTTNPRAAH Trigger: GTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGCAGGCTTGAGAGTCCATTGATTTAAACTCCGCAGATGCTGCAGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR CCA 90 bp | TGCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTaGGCCTGTTCACAGTACAGTCAGGAAAACAAAGAGCTACTTAGG | + |
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Preference number: 1 (lower is better) Translates to: CSGGTRSTTNPRAAH*ACSQYSQENKELLR Trigger: CCTAAGTAGCTCTTTGTTTTCCTGACTGTACTGTGAACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR CCA 90 bp | GACCCAAGCCATGCCCAGAAACAAGCATCAGCAGATGCCACGTGGTaGTTCCCAGTTGGTATGAATCCAGACCTACATCAGACGATATGG | + |
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Preference number: 1 (lower is better) Translates to: DPSHAQKQASADATW*FPVGMNPDLHQTIW Trigger: CCATATCGTCTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGCTTGGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR CCA 90 bp | TGGTGGTTCCCAGTTGGTATGAATCCAGACCTACATCAGACGATATaGGAGTGCCGTAACTGGTCTTTCTGGCTCAATGGCGGGTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: WWFPVGMNPDLHQTI*ECRNWSFWLNGGCR Trigger: TCTACACCCGCCATTGAGCCAGAAAGACCAGTTACGGCACTCCCATATCGTCTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR CCA 90 bp | ACAGACCCAAGCCATGCCCAGAAACAAGCATCAGCAGATGCCACGTaGTGGTTCCCAGTTGGTATGAATCCAGACCTACATCAGACGATA | + |
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Preference number: 1 (lower is better) Translates to: TDPSHAQKQASADAT*WFPVGMNPDLHQTI Trigger: TATCGTCTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGCTTGGGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR TCA 90 bp | AGAAACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGTTGGTATaGATCCAGACCTACATCAGACGATATGGGAGTGCCGTAACTGGT | + |
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Preference number: 1 (lower is better) Translates to: RNKHQQMPRGGSQLV*IQTYIRRYGSAVTG Trigger: ACCAGTTACGGCACTCCCATATCGTCTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR GCA 90 bp | GTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTaGCCACAACAAATACAGCCAAGTAATCTTGGTGCCACGTGGATC | + |
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Preference number: 1 (lower is better) Translates to: VLLAMLAMPTTMFRL*PQQIQPSNLGATWI Trigger: GATCCACGTGGCACCAAGATTACTTGGCTGTATTTGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR TCA 90 bp | GGCAGATTTCTGCCTAGTAACTTCATGAGCCTAAGGAGTCTCAGATaGACTGGATCAGACCGCACCTTGTTTAACCCTATTCTGCGCACA | + |
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Preference number: 1 (lower is better) Translates to: GRFLPSNFMSLRSLR*TGSDRTLFNPILRT Trigger: TGTGCGCAGAATAGGGTTAAACAAGGTGCGGTCTGATCCAGTTCATCTGAGACTCCTTAGGCTCATGAAGTTACTAGGCAGAAATCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR TCA 90 bp | AATCCTATCATCTGGGAGATAGAGGGAGGTGGATCTCTGTGGGTTTaGGACAAGCCTGGTCTACATAATTTCAGGAGAGCTGCAGCTACA | + |
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Preference number: 1 (lower is better) Translates to: NPIIWEIEGGGSLWV*DKPGLHNFRRAAAT Trigger: TGTAGCTGCAGCTCTCCTGAAATTATGTAGACCAGGCTTGTCTCAAACCCACAGAGATCCACCTCCCTCTATCTCCCAGATGATAGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR TCA 90 bp | CATGGGAACACTAAGTCATTTGTTCCTTCAGGTCAGCTGAAATCATaGGAGGCATCTGTTCTGGGCACTTCTGATTGCCCTTCCAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: HGNTKSFVPSGQLKS*EASVLGTSDCPSKW Trigger: CCACTTGGAAGGGCAATCAGAAGTGCCCAGAACAGATGCCTCTCATGATTTCAGCTGACCTGAAGGAACAAATGACTTAGTGTTCCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR TCA 90 bp | TGCCGTAACTGGTCTTTCTGGCTCAATGGCGGGTGTAGAAAATCCTaGCTTCAACAAGAATCCCAGGTGACACACAAAAGCAAATGTTCC | + |
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Preference number: 1 (lower is better) Translates to: CRNWSFWLNGGCRKS*LQQESQVTHKSKCS Trigger: GGAACATTTGCTTTTGTGTGTCACCTGGGATTCTTGTTGAAGTCAGGATTTTCTACACCCGCCATTGAGCCAGAAAGACCAGTTACGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR CCA 90 bp | CGTTTGTGCCCACAACAAATACAGCCAAGTAATCTTGGTGCCACGTaGATCTATCTGCAGCATCTGCGGAGTTTAAATCAATGGACTCTC | + |
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Preference number: 1 (lower is better) Translates to: RLCPQQIQPSNLGAT*IYLQHLRSLNQWTL Trigger: GAGAGTCCATTGATTTAAACTCCGCAGATGCTGCAGATAGATCCACGTGGCACCAAGATTACTTGGCTGTATTTGTTGTGGGCACAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCGCGAATACCGCAGCTTaGAGCGCAGGCAGTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AGPPGNVGYAYYYVPFVPANTAA*SAGSEP Trigger: GGGCTCACTGCCTGCGCTGCAAGCTGCGGTATTCGC...GGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCCTGCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTGGCAGATGCCACGTGGTaGTTCCCAGTTGGTATGAAT | + |
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Preference number: 2 (lower is better) Translates to: SSLLWWHSVYNQSKGRTLADATW*FPVGMN Trigger: ATTCATACCAACTGGGAACCACCACGTGGCATCTGC...CAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGCAGGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGCCAGAGCTGTGCAGAGACCTGCAGTGCTGTCAGGGAGCTTTTCTGTGGGAGATAGAGGGAGGTaGATCTCTGTGGGTTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RTARAVQRPAVLSGSFSVGDRGR*ISVGLR Trigger: TCTCAAACCCACAGAGATCCACCTCCCTCTATCTCC...CACAGAAAAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCACAACAGGACAGCCAGAGCTGTaGAGAGACCTGCAGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: PPGNVGYAYYYVPFVPTTGQPEL*RDLQCC Trigger: ACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCC...TGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCGTGATGAGCATGCTGGAGCTAGTGGGCAGGTCCTCCTGGCAATGTTGGGTGGTGGTTCCCAGTTaGTATGAATCCAGACCTACA | + |
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Preference number: 2 (lower is better) Translates to: SFVMSMLELVGRSSWQCWVVVPS*YESRPT Trigger: TGTAGGTCTGGATTCATACCAACTGGGAACCACCAC...CCAACATTGCCAGGAGGACCTGCCCACTAGCTCCAGCATGCTCATCACGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGCCAGAGCTGTGCAGAGACCTGCAGTGCTGTCAGGGAGCTTTTCTGTGGTGGTGGTTCCCAGTTaGTATGAATCCAGACCTACA | + |
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Preference number: 2 (lower is better) Translates to: RTARAVQRPAVLSGSFSVVVVPS*YESRPT Trigger: TGTAGGTCTGGATTCATACCAACTGGGAACCACCAC...CACAGAAAAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGCCAGAGCTGTGCAGAGACCTGCAGTGCTGTCAGGGAGCTTTTCTGTGGAGTCTCAGATGAACTaGATCAGACCGCACCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: RTARAVQRPAVLSGSFSVESQMN*IRPHLV Trigger: AACAAGGTGCGGTCTGATCCAGTTCATCTGAGACTC...CACAGAAAAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCGTGATGAGCATGCTGGAGCTAGTGGGCAGGTCCTCCTGGCAATGTTGGGTAAAGACTTGTAGCTaGCCTTCCCCTCAGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SFVMSMLELVGRSSWQCWVKTCS*PSPQLK Trigger: TTTCAGCTGAGGGGAAGGCCAGCTACAAGTCTTTAC...CCAACATTGCCAGGAGGACCTGCCCACTAGCTCCAGCATGCTCATCACGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCACAACAAGCTGTGCAGAGACCTaGAGTGCTGTCAGGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PPGNVGYAYYYVPFVPTTSCAET*SAVREL Trigger: AAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCT...TGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCCTGCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTGAAACACAAGAATCTGTaGACTTGTGTGCAATCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLLWWHSVYNQSKGRTLKHKNL*TCVQSA Trigger: AGCGGATTGCACACAAGTCCACAGATTCTTGTGTTT...CAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGCAGGCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTACAACCAATCCAAGGGCCGCACACTGGGCCTGTTCACAGTACAGTCAGGTGTTTAACCCTATTCTaGGCACAGCATAAACACCCA | + |
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Preference number: 2 (lower is better) Translates to: GLQPIQGPHTGPVHSTVRCLTLF*AQHKHP Trigger: TGGGTGTTTATGCTGTGCGCAGAATAGGGTTAAACA...CCTGACTGTACTGTGAACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCGTGATGAGCATGCTGGAGCTAGTGGGCAGGTCCTCCTGGCAATGTTGGAAACACAAGAATCTGTaGACTTGTGTGCAATCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SFVMSMLELVGRSSWQCWKHKNL*TCVQSA Trigger: AGCGGATTGCACACAAGTCCACAGATTCTTGTGTTT...CCAACATTGCCAGGAGGACCTGCCCACTAGCTCCAGCATGCTCATCACGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCGAGTCTCAGATGAACTaGATCAGACCGCACCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: AGPPGNVGYAYYYVPFVPESQMN*IRPHLV Trigger: AACAAGGTGCGGTCTGATCCAGTTCATCTGAGACTC...GGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGGGCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTGGAGATAGAGGGAGGTaGATCTCTGTGGGTTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LVGRSSWQCWLCLLLCSVGDRGR*ISVGLR Trigger: TCTCAAACCCACAGAGATCCACCTCCCTCTATCTCC...AACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGCCCACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR CAA 90 bp | CAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTaGTGCCCACAACAAATACAGCCAAGTAATCTTGGTGCCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: QVLLAMLAMPTTMFR*CPQQIQPSNLGATW Trigger: CCACGTGGCACCAAGATTACTTGGCTGTATTTGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | TATCATCTGGGAGATAGAGGGAGGTGGATCTCTGTGGGTTTGAGACAAGCCTGGGTAAAGACTTGTAGCTaGCCTTCCCCTCAGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: YHLGDRGRWISVGLRQAWVKTCS*PSPQLK Trigger: TTTCAGCTGAGGGGAAGGCCAGCTACAAGTCTTTAC...CCAGGCTTGTCTCAAACCCACAGAGATCCACCTCCCTCTATCTCCCAGATGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGCCAGAGCTGTGCAGAGACCTGCAGTGCTGTCAGGGAGCTTTTCTGTGCTTCAAAAACAGTCTTaGCGGCATATACAAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: RTARAVQRPAVLSGSFSVLQKQS*RHIQKQ Trigger: CTGTTTTTGTATATGCCGTCAAGACTGTTTTTGAAG...CACAGAAAAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGTGGGCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTCCACACACTTATGTGTaGCATTTCAGGAGACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LVGRSSWQCWLCLLLCSVPHTYV*HFRRQV Trigger: TACTTGTCTCCTGAAATGTCACACATAAGTGTGTGG...AACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGCCCACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | TATCATCTGGGAGATAGAGGGAGGTGGATCTCTGTGGGTTTGAGACAAGCCTGGAAACACAAGAATCTGTaGACTTGTGTGCAATCCGCT | + |
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Preference number: 2 (lower is better) Translates to: YHLGDRGRWISVGLRQAWKHKNL*TCVQSA Trigger: AGCGGATTGCACACAAGTCCACAGATTCTTGTGTTT...CCAGGCTTGTCTCAAACCCACAGAGATCCACCTCCCTCTATCTCCCAGATGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCACAACACGGAGTTTAAATCAATaGACTCTCAAGCCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PPGNVGYAYYYVPFVPTTRSLNQ*TLKPAL Trigger: CAGAGCAGGCTTGAGAGTCCATTGATTTAAACTCCG...TGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCACAACACCACACACTTATGTGTaGCATTTCAGGAGACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PPGNVGYAYYYVPFVPTTPHTYV*HFRRQV Trigger: TACTTGTCTCCTGAAATGTCACACATAAGTGTGTGG...TGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR TCA 90 bp | GCGTCACTTTCTGTAACTGAGATAAAAAGGAGGTTTAGTAGTGGTACGAAAGTGGAGTTGTTACAAGTCTaGCTCTGCAGCTGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: ASLSVTEIKRRFSSGTKVELLQV*LCSWQQ Trigger: CTGTTGCCAGCTGCAGAGTCAGACTTGTAACAACTC...CACTTTCGTACCACTACTAAACCTCCTTTTTATCTCAGTTACAGAAAGTGACGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGAGCATAAACACCCAATaGTTTAAAGACAGACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SGQVLLAMLAMPTTMFRLSINTQ*FKDRLH Trigger: ATGAAGTCTGTCTTTAAAGCATTGGGTGTTTATGCT...CAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGCCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR-3UTR CCA 90 bp | GCGTCACTTTCTGTAACTGAGATAAAAAGGAGGTTTAGTAGTGGTACGAAAGTGGCAGATGCCACGTGGTaGTTCCCAGTTGGTATGAAT | + |
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Preference number: 2 (lower is better) Translates to: ASLSVTEIKRRFSSGTKVADATW*FPVGMN Trigger: ATTCATACCAACTGGGAACCACCACGTGGCATCTGC...CACTTTCGTACCACTACTAAACCTCCTTTTTATCTCAGTTACAGAAAGTGACGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR CAA 90 bp | GCACTGGCAAATACTGTAACTAGGGAAAGTGCTTCAAAAACAGTCTaGACGGCATATACAAAAACAGTAGCGGCATACGCCTTTAATCCT | + |
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Preference number: 2 (lower is better) Translates to: ALANTVTRESASKTV*TAYTKTVAAYAFNP Trigger: AGGATTAAAGGCGTATGCCGCTACTGTTTTTGTATATGCCGTCAAGACTGTTTTTGAAGCACTTTCCCTAGTTACAGTATTTGCCAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR GCA 72 bp | ACCGCAGCTTGCAGCGCAGGCAGTGAGCCCAGCTCCTaGTGTAAGGCTGGTGGGACAGTCACACTAGCACTG | + |
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Preference number: 3 (lower is better) Translates to: TAACSAGSEPSS*CKAGGTVTLAL Trigger: CAGTGCTAGTGTGACTGTCCCACCAGCCTTACAGCAGGAGCTGGGCTCACTGCCTGCGCTGCAAGCTGCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| 3UTR GCA 72 bp | AAGTCTGACTCTGCAGCTGGCAACAGACCCAAGCCATaGCCAGAAACAAGCATCAGCAGATGCCACGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSDSAAGNRPKP*PETSISRCHVV Trigger: CACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGCTTGGGTCTGTTGCCAGCTGCAGAGTCAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACAGCCAGAGCTGTGCAGAGACCTGCAGTGCTGTCAGGGAGCTTTTCTGTGTGGATCTCTGTGGGTTaGAGACAAGCCTGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: RTARAVQRPAVLSGSFSVWISVG*RQAWST Trigger: TGTAGACCAGGCTTGTCTCAAACCCACAGAGATCCA...CACAGAAAAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | GGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTaGGCCTGTTCACAGTACAGTCAGGAAAACAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTRSTTNPRAAH*ACSQYSQENKE Trigger: CTCTTTGTTTTCCTGACTGTACTGTGAACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | ATGCTGGAGCTAGTGGGCAGGTCCTCCTGGCAATGTTaGCTATGCCTACTACTATGTTCCGTTTGTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: MLELVGRSSWQC*LCLLLCSVCAH Trigger: GTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGCCCACTAGCTCCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | GCATCTGTTCTGGGCACTTCTGATTGCCCTTCCAAGTaGCCTTGGGATGCTGACCCAGGCTACCTAAACGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASVLGTSDCPSK*PWDADPGYLND Trigger: ATCGTTTAGGTAGCCTGGGTCAGCATCCCAAGGCCACTTGGAAGGGCAATCAGAAGTGCCCAGAACAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | GTGATGAGCATGCTGGAGCTAGTGGGCAGGTCCTCCTaGCAATGTTGGCTATGCCTACTACTATGTTCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: VMSMLELVGRSS*QCWLCLLLCSV Trigger: AACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGCCCACTAGCTCCAGCATGCTCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | CCAGACCTACATCAGACGATATGGGAGTGCCGTAACTaGTCTTTCTGGCTCAATGGCGGGTGTAGAAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: PDLHQTIWECRN*SFWLNGGCRKS Trigger: GGATTTTCTACACCCGCCATTGAGCCAGAAAGACCAGTTACGGCACTCCCATATCGTCTGATGTAGGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | CATGCCCAGAAACAAGCATCAGCAGATGCCACGTGGTaGTTCCCAGTTGGTATGAATCCAGACCTACATCAG | + |
|
Preference number: 3 (lower is better) Translates to: HAQKQASADATW*FPVGMNPDLHQ Trigger: CTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | AGCCATGCCCAGAAACAAGCATCAGCAGATGCCACGTaGTGGTTCCCAGTTGGTATGAATCCAGACCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: SHAQKQASADAT*WFPVGMNPDLH Trigger: ATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | CCAGTTGGTATGAATCCAGACCTACATCAGACGATATaGGAGTGCCGTAACTGGTCTTTCTGGCTCAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: PVGMNPDLHQTI*ECRNWSFWLNG Trigger: GCCATTGAGCCAGAAAGACCAGTTACGGCACTCCCATATCGTCTGATGTAGGTCTGGATTCATACCAACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | ACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGTTaGTATGAATCCAGACCTACATCAGACGATATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSISRCHVVVPS*YESRPTSDDMG Trigger: TCCCATATCGTCTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR TCA 72 bp | TGGTCTTTCTGGCTCAATGGCGGGTGTAGAAAATCCTaGCTTCAACAAGAATCCCAGGTGACACACAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSFWLNGGCRKS*LQQESQVTHKS Trigger: GCTTTTGTGTGTCACCTGGGATTCTTGTTGAAGTCAGGATTTTCTACACCCGCCATTGAGCCAGAAAGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR TCA 72 bp | AAAATTAAAACAGCACTAACGGAGTTGTTACAAGTCTaGCTCTGCAGCTGGCAACAGACCCAAGCCATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KIKTALTELLQV*LCSWQQTQAMP Trigger: GGGCATGGCTTGGGTCTGTTGCCAGCTGCAGAGTCAGACTTGTAACAACTCCGTTAGTGCTGTTTTAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR TCA 72 bp | CTGCCTAGTAACTTCATGAGCCTAAGGAGTCTCAGATaGACTGGATCAGACCGCACCTTGTTTAACCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: LPSNFMSLRSLR*TGSDRTLFNPI Trigger: AATAGGGTTAAACAAGGTGCGGTCTGATCCAGTTCATCTGAGACTCCTTAGGCTCATGAAGTTACTAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR TCA 72 bp | ACTAAGTCATTTGTTCCTTCAGGTCAGCTGAAATCATaGGAGGCATCTGTTCTGGGCACTTCTGATTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TKSFVPSGQLKS*EASVLGTSDCP Trigger: AGGGCAATCAGAAGTGCCCAGAACAGATGCCTCTCATGATTTCAGCTGACCTGAAGGAACAAATGACTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR TCA 72 bp | ATGGGAACACTAAGTCATTTGTTCCTTCAGGTCAGCTaGAATCATGAGAGGCATCTGTTCTGGGCACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MGTLSHLFLQVS*NHERHLFWALL Trigger: CAGAAGTGCCCAGAACAGATGCCTCTCATGATTTCAGCTGACCTGAAGGAACAAATGACTTAGTGTTCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR GCA 72 bp | GCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTaGCCACAACAAATACAGCCAAGTAATCTTGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AMLAMPTTMFRL*PQQIQPSNLGA Trigger: GGCACCAAGATTACTTGGCTGTATTTGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | TTACCCTATCAGAATCCTTTTGTAAAGACTTGTAGCTaGCCTTCCCCTCAGCTGAAAGGGTGGAGAACGATA | + |
|
Preference number: 3 (lower is better) Translates to: LPYQNPFVKTCS*PSPQLKGWRTI Trigger: TATCGTTCTCCACCCTTTCAGCTGAGGGGAAGGCCAGCTACAAGTCTTTACAAAAGGATTCTGATAGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR GCA 72 bp | AAACACTGGAGTATAAATATGATCCTTCAAACCCAGTaGTACGCCTTTAATCCCAGCAGCTATGAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KHWSINMILQTQ*YAFNPSSYEAE Trigger: CTCTGCCTCATAGCTGCTGGGATTAAAGGCGTAGCACTGGGTTTGAAGGATCATATTTATACTCCAGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CCA 72 bp | CCACAACAAATACAGCCAAGTAATCTTGGTGCCACGTaGATCTATCTGCAGCATCTGCGGAGTTTAAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: PQQIQPSNLGAT*IYLQHLRSLNQ Trigger: TTGATTTAAACTCCGCAGATGCTGCAGATAGATCCACGTGGCACCAAGATTACTTGGCTGTATTTGTTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR TCA 72 bp | CTAACAGTCTTACATACATTATGCATGTGGAAGCGCTaGCATCCACATTACACACATGGGAACACTAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LTVLHTLCMWKR*HPHYTHGNTKS Trigger: TGACTTAGTGTTCCCATGTGTGTAATGTGGATGTCAGCGCTTCCACATGCATAATGTATGTAAGACTGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACTATGTTCCGTTTGTGCCCACAACAAATACAGCCAAGTAATCTTGGTGCCAGCTTCAAAAACAGTCTaGACGGCATATACAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LLCSVCAHNKYSQVILVPASKTV*TAYTKT Trigger: TGTTTTTGTATATGCCGTCAAGACTGTTTTTGAAGC...TGGCACCAAGATTACTTGGCTGTATTTGTTGTGGGCACAAACGGAACATAGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTGGGCCTGTTCACCCTGGAAATCTGTaGGGATGCTGGGCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVALGLQPIQGPHTGPVHPGNL*GCWAGA Trigger: AGCCCCGGCCCAGCATCCTCACAGATTTCCAGGGTG...AACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCATGCTGGGCCGGGGCTaGTCCTCTGTCGCGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGNVGYAYYYVPFVPMLGRG*SSVAKR Trigger: ACGCTTCGCGACAGAGGAGCAGCCCCGGCCCAGCAT...GGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGCCTGCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTGCTCTGCCCTCATCTGTaGCTCCTGCTCTGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLWWHSVYNQSKGRTLLCPHL*LLLCIL Trigger: AAGGATGCAGAGCAGGAGTCACAGATGAGGGCAGAG...CAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGCAGGCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTGGGCCTGTTCCTTCTGCAGCACCCTaGAAATCTGTGAGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVALGLQPIQGPHTGPVPSAAP*KSVRML Trigger: CAGCATCCTCACAGATTTCCAGGGTGCTGCAGAAGG...AACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGAGCTGTGCAGAGACCTGCAGTGCTGTCAGGGAGCTTTTCTGTGACTCGTCCATCATGTTaGCGGTGGACAGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTARAVQRPAVLSGSFSVTRPSC*RWTAPA Trigger: AGCAGGAGCTGTCCACCGTCAACATGATGGACGAGT...CACAGAAAAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | GCCATGCCCAGAAACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGTTGGTACTCTGCCCTCATCTGTaGCTCCTGCTCTGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AMPRNKHQQMPRGGSQLVLCPHL*LLLCIL Trigger: AAGGATGCAGAGCAGGAGTCACAGATGAGGGCAGAG...TACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTACAACCAATCCAAGGGCCGCACACTGGGCCTGTTCACAGTACAGTCAGGCCAGCCTGGCGTATCTaGCAAACTCGTCCATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLQPIQGPHTGPVHSTVRPAWRI*QTRPSC Trigger: ACATGATGGACGAGTTTGCCAGATACGCCAGGCTGG...CCTGACTGTACTGTGAACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTGGGCCTGTTAGTAATACTTCCAAATaGGCGAGATCATCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVALGLQPIQGPHTGPVSNTSK*ARSSAL Trigger: CAGCGCTGATGATCTCGCTCATTTGGAAGTATTACT...AACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCACAACAGGGACGGCAGGAGGATaGGCAGCAAGTTACACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPGNVGYAYYYVPFVPTTGTAGG*AASYTR Trigger: TCGGGTGTAACTTGCTGCGCATCCTCCTGCCGTCCC...TGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGCCCAGAAACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGTTGGTACCAGCCTGGCGTATCTaGCAAACTCGTCCATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AMPRNKHQQMPRGGSQLVPAWRI*QTRPSC Trigger: ACATGATGGACGAGTTTGCCAGATACGCCAGGCTGG...TACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR CCA 90 bp | GCTACGCCTTTAATCCCAGCAGCTATGAGGCAGAGACGAGAGGATTCCTATAAATCGCGAAGCGTGGCTTaGGACCTCCCACCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATPLIPAAMRQRREDSYKSRSVA*DLPPSR Trigger: TCTGGAGGGTGGGAGGTCCCAAGCCACGCTTCGCGA...TTTATAGGAATCCTCTCGTCTCTGCCTCATAGCTGCTGGGATTAAAGGCGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
||
| 3UTR CAA 72 bp | CATGCTGGAGCTAGTGGGCAGGTCCTCCTGGCAATGTaGGCTATGCCTACTACTATGTTCCGTTTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HAGASGQVLLAM*AMPTTMFRLCP Trigger: TGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGCCCACTAGCTCCAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTGGTGGCACTCGGTCTACAACCAATCCAAGGGCCGCACACTGGGCCTGTTCTAAAATCCAACAGGTaGTTCCAATTCCACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALVALGLQPIQGPHTGPVLKSNR*FQFHLL Trigger: TAGCAGGTGGAATTGGAATCACCTGTTGGATTTTAG...AACAGGCCCAGTGTGCGGCCCTTGGATTGGTTGTAGACCGAGTGCCACCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | GCTACGCCTTTAATCCCAGCAGCTATGAGGCAGAGACGAGAGGATTCCTATAAACTCTGCCCTCATCTGTaGCTCCTGCTCTGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATPLIPAAMRQRREDSYKLCPHL*LLLCIL Trigger: AAGGATGCAGAGCAGGAGTCACAGATGAGGGCAGAG...TTTATAGGAATCCTCTCGTCTCTGCCTCATAGCTGCTGGGATTAAAGGCGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGGGTTTGAGACAAGCCTGGTCTACATAATTTCAGGAGAGCTGCAGCTAACTCGTCCATCATGTTaGCGGTGGACAGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCGFETSLVYIISGELQLTRPSC*RWTAPA Trigger: AGCAGGAGCTGTCCACCGTCAACATGATGGACGAGT...TAGCTGCAGCTCTCCTGAAATTATGTAGACCAGGCTTGTCTCAAACCCACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGTGCCCTGCTCTGCATCCTTCTaGAGCACCCTGGAAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGNVGYAYYYVPFVPCSASF*STLEIN Trigger: GTTTATTTCCAGGGTGCTGCAGAAGGATGCAGAGCA...GGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023913.11 ENSMUST00000233566.2 |
||
| CDS-3UTR GCA 90 bp | GATGCCACGTGGTGGTTCCCAGTTGGTATGAATCCAGACCTACATCAGACGATACTCATCTGTGACTCCTaGTCTGCATCCTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DATWWFPVGMNPDLHQTILICDS*SASFCS Trigger: GCTGCAGAAGGATGCAGAGCAGGAGTCACAGATGAG...TATCGTCTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR GCA 90 bp | GCGTCACTTTCTGTAACTGAGATAAAAAGGAGGTTTAGTAGTGGTACGAAAGTGGGGACGGCAGGAGGATaGGCAGCAAGTTACACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLSVTEIKRRFSSGTKVGTAGG*AASYTR Trigger: TCGGGTGTAACTTGCTGCGCATCCTCCTGCCGTCCC...CACTTTCGTACCACTACTAAACCTCCTTTTTATCTCAGTTACAGAAAGTGACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGGCAGGTCCTCCTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTTGCTAAAATCCAACAGGTaGTTCCAATTCCACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGQVLLAMLAMPTTMFRLLKSNR*FQFHLL Trigger: TAGCAGGTGGAATTGGAATCACCTGTTGGATTTTAG...CAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAGGAGGACCTGCCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGTTGGTATGAATCCAGACCTAAAATCCAACAGGTaGTTCCAATTCCACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KQASADATWWFPVGMNPDLKSNR*FQFHLL Trigger: TAGCAGGTGGAATTGGAATCACCTGTTGGATTTTAG...GTCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| CDS-3UTR GCA 90 bp | CTACTATGTTCCGTTTGTGCCCACAACAAATACAGCCAAGTAATCTTGGTGCCATGCTCTGCATCCTTCTaGAGCACCCTGGAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSVCAHNKYSQVILVPCSASF*STLEIC Trigger: ACAGATTTCCAGGGTGCTGCAGAAGGATGCAGAGCA...TGGCACCAAGATTACTTGGCTGTATTTGTTGTGGGCACAAACGGAACATAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTGGACTTGTGTGCAATCCGCTCTTTACCCTATCAGAATCCTTTTGTAAACCAGCCTGGCGTATCTaGCAAACTCGTCCATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ICGLVCNPLFTLSESFCKPAWRI*QTRPSC Trigger: ACATGATGGACGAGTTTGCCAGATACGCCAGGCTGG...TTTACAAAAGGATTCTGATAGGGTAAAGAGCGGATTGCACACAAGTCCACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
||
| 3UTR CAA 72 bp | CTGGCAATGTTGGCTATGCCTACTACTATGTTCCGTTaGTGCCCACAACAAATACAGCCAAGTAATCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAMLAMPTTMFR*CPQQIQPSNLG Trigger: ACCAAGATTACTTGGCTGTATTTGTTGTGGGCACAAACGGAACATAGTAGTAGGCATAGCCAACATTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| CDS-3UTR TCA 90 bp | TCTGTGGACTTGTGTGCAATCCGCTCTTTACCCTATCAGAATCCTTTTGTAAAGAGTAATACTTCCAAATaGGCGAGATCATCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SVDLCAIRSLPYQNPFVKSNTSK*ARSSAL Trigger: CAGCGCTGATGATCTCGCTCATTTGGAAGTATTACT...CTTTACAAAAGGATTCTGATAGGGTAAAGAGCGGATTGCACACAAGTCCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| CDS-3UTR GCA 90 bp | ATCTGTGGACTTGTGTGCAATCCGCTCTTTACCCTATCAGAATCCTTTTGTAAATGCTCTGCATCCTTCTaGAGCACCCTGGAAATAAAC | + |
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Preference number: 4 (lower is better) Translates to: ICGLVCNPLFTLSESFCKCSASF*STLEIN Trigger: GTTTATTTCCAGGGTGCTGCAGAAGGATGCAGAGCA...TTTACAAAAGGATTCTGATAGGGTAAAGAGCGGATTGCACACAAGTCCACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023913.11 ENSMUST00000233566.2 |
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| 3UTR CAA 72 bp | AATACTGTAACTAGGGAAAGTGCTTCAAAAACAGTCTaGACGGCATATACAAAAACAGTAGCGGCATACGCC | + |
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Preference number: 4 (lower is better) Translates to: NTVTRESASKTV*TAYTKTVAAYA Trigger: GGCGTATGCCGCTACTGTTTTTGTATATGCCGTCAAGACTGTTTTTGAAGCACTTTCCCTAGTTACAGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| CDS-3UTR TCA 90 bp | AAAATCCTGACTTCAACAAGAATCCCAGGTGACACACAAAAGCAAATGTTCCAAAGTAATACTTCCAAATaGGCGAGATCATCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KILTSTRIPGDTQKQMFQSNTSK*ARSSAL Trigger: CAGCGCTGATGATCTCGCTCATTTGGAAGTATTACT...TTGGAACATTTGCTTTTGTGTGTCACCTGGGATTCTTGTTGAAGTCAGGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| CDS GCA 90 bp | CTCGCGATCTGTGAGAAGCTCGGAGGCACCTGGAGGAAGAGAGCTTaGAGCATGGACCGCGCAAGGCCCCGCGCTCGGCCGCTCCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LAICEKLGGTWRKRA*SMDRARPRARPLPA Trigger: GGCGGGGAGCGGCCGAGCGCGGGGCCTTGCGCGGTCCATGCTGCAAGCTCTCTTCCTCCAGGTGCCTCCGAGCTTCTCACAGATCGCGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS GCA 90 bp | CCTTCTGCAGCACCCTGGAAATCTGTGAGGATGCTGGGCCGGGGCTaGTCCTCTGTCGCGAAGCGTGGCTTGGGACCTCCCACCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSAAPWKSVRMLGRG*SSVAKRGLGPPTLQ Trigger: CTGGAGGGTGGGAGGTCCCAAGCCACGCTTCGCGACAGAGGAGCAGCCCCGGCCCAGCATCCTCACAGATTTCCAGGGTGCTGCAGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS-3UTR CAA 90 bp | AGGACAGCCAGAGCTGTGCAGAGACCTGCAGTGCTGTCAGGGAGCTTTTCTGTGGTCGCGAAGCGTGGCTaGGGACCTCCCACCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RTARAVQRPAVLSGSFSVVAKRG*GPPTLQ Trigger: CTGGAGGGTGGGAGGTCCCAAGCCACGCTTCGCGAC...CACAGAAAAGCTCCCTGACAGCACTGCAGGTCTCTGCACAGCTCTGGCTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS-3UTR CAA 90 bp | GCCATGCCCAGAAACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGTTGGTAGCGCTGCCGTGCGTTTaGAGCTTGTCCGTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: AMPRNKHQQMPRGGSQLVALPCV*SLSVIL Trigger: CAAGATGACGGACAAGCTCAAAACGCACGGCAGCGC...TACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTCTGGGCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233566.2 |
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| CDS TCA 90 bp | ACTTGCTGGGCACCACAGCCACAGGGACGGAGTAATACTTCCAAATaGGCGAGATCATCAGCGCTGCCGTGCGTTTTGAGCTTGTCCGTC | + |
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Preference number: 5 (lower is better) Translates to: TCWAPQPQGRSNTSK*ARSSALPCVLSLSV Trigger: GACGGACAAGCTCAAAACGCACGGCAGCGCTGATGATCTCGCTCATTTGGAAGTATTACTCCGTCCCTGTGGCTGTGGTGCCCAGCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233566.2 |
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| CDS-3UTR CAA 90 bp | CTCTGCAGCTGGCAACAGACCCAAGCCATGCCCAGAAACAAGCATCAGCAGATGAACTCGTCCATCATGTaGACGGTGGACAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LCSWQQTQAMPRNKHQQMNSSIM*TVDSSC Trigger: GCAGGAGCTGTCCACCGTCAACATGATGGACGAGTT...CATCTGCTGATGCTTGTTTCTGGGCATGGCTTGGGTCTGTTGCCAGCTGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| CDS-3UTR CAA 90 bp | GAAACAAGCATCAGCAGATGCCACGTGGTGGTTCCCAGTTGGTATGAATCCAGAAACTCGTCCATCATGTaGACGGTGGACAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ETSISRCHVVVPSWYESRNSSIM*TVDSSC Trigger: GCAGGAGCTGTCCACCGTCAACATGATGGACGAGTT...TCTGGATTCATACCAACTGGGAACCACCACGTGGCATCTGCTGATGCTTGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| CDS-3UTR CAA 90 bp | GCTACGCCTTTAATCCCAGCAGCTATGAGGCAGAGACGAGAGGATTCCTATAAAAACTCGTCCATCATGTaGACGGTGGACAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ATPLIPAAMRQRREDSYKNSSIM*TVDSSC Trigger: GCAGGAGCTGTCCACCGTCAACATGATGGACGAGTT...TTTATAGGAATCCTCTCGTCTCTGCCTCATAGCTGCTGGGATTAAAGGCGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 ENSMUST00000233566.2 |
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| CDS-3UTR CAA 90 bp | GATGCCACGTGGTGGTTCCCAGTTGGTATGAATCCAGACCTACATCAGACGATAGCCTTCACGTGCGTTTaGAGCTTGTCCGTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: DATWWFPVGMNPDLHQTIAFTCV*SLSVIL Trigger: CAAGATGACGGACAAGCTCAAAACGCACGTGAAGGC...TATCGTCTGATGTAGGTCTGGATTCATACCAACTGGGAACCACCACGTGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 |
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| CDS TCA 90 bp | ACTTGCTGGGCACCACAGCCACAGGGACGGAGTAATACTTCCAAATaGGCGAGATCATCAGCGCTGCTTGTAGTATGTAGAAAGCAACAC | + |
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Preference number: 5 (lower is better) Translates to: TCWAPQPQGRSNTSK*ARSSALLVVCRKQH Trigger: GTGTTGCTTTCTACATACTACAAGCAGCGCTGATGATCTCGCTCATTTGGAAGTATTACTCCGTCCCTGTGGCTGTGGTGCCCAGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 |
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| CDS-3UTR CAA 90 bp | CTCTGCAGCTGGCAACAGACCCAAGCCATGCCCAGAAACAAGCATCAGCAGATGACGATAGCCACAACTTaGTTACAGACTAAAATCCAA | + |
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Preference number: 5 (lower is better) Translates to: LCSWQQTQAMPRNKHQQMTIATT*LQTKIQ Trigger: TTGGATTTTAGTCTGTAACAAAGTTGTGGCTATCGT...CATCTGCTGATGCTTGTTTCTGGGCATGGCTTGGGTCTGTTGCCAGCTGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023913.11 |
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| CDS-3UTR CAA 90 bp | ATCTGTGGACTTGTGTGCAATCCGCTCTTTACCCTATCAGAATCCTTTTGTAAAGCCTTCACGTGCGTTTaGAGCTTGTCCGTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: ICGLVCNPLFTLSESFCKAFTCV*SLSVIL Trigger: CAAGATGACGGACAAGCTCAAAACGCACGTGAAGGC...TTTACAAAAGGATTCTGATAGGGTAAAGAGCGGATTGCACACAAGTCCACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 |
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| CDS GCA 72 bp | TGTGAGAAGCTCGGAGGCACCTGGAGGAAGAGAGCTTaGAGCATGGACCGCGCAAGGCCCCGCGCTCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: CEKLGGTWRKRA*SMDRARPRARP Trigger: CGGCCGAGCGCGGGGCCTTGCGCGGTCCATGCTGCAAGCTCTCTTCCTCCAGGTGCCTCCGAGCTTCTCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS CCA 72 bp | TGGGCCGGGGCTGCTCCTCTGTCGCGAAGCGTGGCTTaGGACCTCCCACCCTCCAGAGCTGGTTGCAACCTC | + |
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Preference number: 6 (lower is better) Translates to: WAGAAPLSRSVA*DLPPSRAGCNL Trigger: GAGGTTGCAACCAGCTCTGGAGGGTGGGAGGTCCCAAGCCACGCTTCGCGACAGAGGAGCAGCCCCGGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS CCA 72 bp | GATGCTGGGCCGGGGCTGCTCCTCTGTCGCGAAGCGTaGCTTGGGACCTCCCACCCTCCAGAGCTGGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: DAGPGLLLCREA*LGTSHPPELVA Trigger: TGCAACCAGCTCTGGAGGGTGGGAGGTCCCAAGCCACGCTTCGCGACAGAGGAGCAGCCCCGGCCCAGCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS CAA 72 bp | CTGGGCCGGGGCTGCTCCTCTGTCGCGAAGCGTGGCTaGGGACCTCCCACCCTCCAGAGCTGGTTGCAACCT | + |
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Preference number: 6 (lower is better) Translates to: LGRGCSSVAKRG*GPPTLQSWLQP Trigger: AGGTTGCAACCAGCTCTGGAGGGTGGGAGGTCCCAAGCCACGCTTCGCGACAGAGGAGCAGCCCCGGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS GCA 72 bp | AGCGTGGCTTGGGACCTCCCACCCTCCAGAGCTGGTTaGAACCTCGCGATCTGTGAGAAGCTCGGAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: SVAWDLPPSRAG*NLAICEKLGGT Trigger: GGTGCCTCCGAGCTTCTCACAGATCGCGAGGTTGCAACCAGCTCTGGAGGGTGGGAGGTCCCAAGCCACGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS TCA 72 bp | CCCACCCTCCAGAGCTGGTTGCAACCTCGCGATCTGTaGGAAGCTCGGAGGCACCTGGAGGAAGAGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: PTLQSWLQPRDL*EARRHLEEESL Trigger: CAAGCTCTCTTCCTCCAGGTGCCTCCGAGCTTCTCACAGATCGCGAGGTTGCAACCAGCTCTGGAGGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS CCA 72 bp | TGCAACCTCGCGATCTGTGAGAAGCTCGGAGGCACCTaGAGGAAGAGAGCTTGCAGCATGGACCGCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: CNLAICEKLGGT*RKRACSMDRAR Trigger: CCTTGCGCGGTCCATGCTGCAAGCTCTCTTCCTCCAGGTGCCTCCGAGCTTCTCACAGATCGCGAGGTTGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS TCA 72 bp | GCACCACAGCCACAGGGACGGAGTAATACTTCCAAATaGGCGAGATCATCAGCGCTGCCGTGCGTTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: APQPQGRSNTSK*ARSSALPCVLS Trigger: GCTCAAAACGCACGGCAGCGCTGATGATCTCGCTCATTTGGAAGTATTACTCCGTCCCTGTGGCTGTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233566.2 |
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| CDS GCA 72 bp | AGCTACTTACAAACGAGGACAGGGACGGCAGGAGGATaGGCAGCAAGTTACACCCGAACACGAAGCTCAACA | + |
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Preference number: 6 (lower is better) Translates to: SYLQTRTGTAGG*AASYTRTRSST Trigger: TGTTGAGCTTCGTGTTCGGGTGTAACTTGCTGCGCATCCTCCTGCCGTCCCTGTCCTCGTTTGTAAGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232832.2 |
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| CDS TCA 72 bp | GCACCACAGCCACAGGGACGGAGTAATACTTCCAAATaGGCGAGATCATCAGCGCTGCTTGTAGTATGTAGA | + |
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Preference number: 6 (lower is better) Translates to: APQPQGRSNTSK*ARSSALLVVCR Trigger: TCTACATACTACAAGCAGCGCTGATGATCTCGCTCATTTGGAAGTATTACTCCGTCCCTGTGGCTGTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 |
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| CDS TCA 72 bp | AAAGCAACACTTATAAACCACTTGATCTTGGCCAACTaGGCTGTCCGTGCCTTCACGTGCGTTTTGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: KATLINHLILAN*AVRAFTCVLSL Trigger: CAAGCTCAAAACGCACGTGAAGGCACGGACAGCTCAGTTGGCCAAGATCAAGTGGTTTATAAGTGTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023913.11 ENSMUST00000232832.2 |
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