Pregenerated sensors for GEN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051235Ensembl transcript IDs: ENSMUST00000166117.4, ENSMUST00000218259.2, ENSMUST00000218487.2, ENSMUST00000218547.2, ENSMUST00000219600.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGCACTGATGCCAGAAAGGAGCTGCTCTTCAGGGTTGCTCTGCTaGAGGTCTCTACCGGACCCTTCACTGTCTGAGGTCCCTTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: KALMPERSCSSGLLC*RSLPDPSLSEVPCS Trigger: AGAACAAGGGACCTCAGACAGTGAAGGGTCCGGTAGAGACCTTCAGCAGAGCAACCCTGAAGAGCAGCTCCTTTCTGGCATCAGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR GCA 90 bp | GGAGAATTACTAAAAGAAGTACCCGCCCAATCAATGGTACTCAACTaGAGATCAGTAATCACAGAGATGTCATGGGAGGAAGAGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: GELLKEVPAQSMVLN*RSVITEMSWEEELG Trigger: GCCCAGCTCTTCCTCCCATGACATCTCTGTGATTACTGATCTGCAGTTGAGTACCATTGATTGGGCGGGTACTTCTTTTAGTAATTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR TCA 90 bp | TTGGCAGCCCAACTTGAAGACTGGAAGTCTTTACTGCTTTGTCACTaGAAGAATAAGGTAAGGAAGTATTCGCCCCGCAGTTTTCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LAAQLEDWKSLLLCH*KNKVRKYSPRSFLG Trigger: TCCAAGAAAACTGCGGGGCGAATACTTCCTTACCTTATTCTTTCAGTGACAAAGCAGTAAAGACTTCCAGTCTTCAAGTTGGGCTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR TCA 90 bp | TTTAGGCTTATTTTTCATACTTTTCTGTTTCCTTCCTTTGGTCTCTaGCAGCTGTTTCTGGTAGACAGCCACAGCATCAGGATAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FRLIFHTFLFPSFGL*QLFLVDSHSIRIGC Trigger: GCAGCCTATCCTGATGCTGTGGCTGTCTACCAGAAACAGCTGTCAGAGACCAAAGGAAGGAAACAGAAAAGTATGAAAAATAAGCCTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR TCA 90 bp | TACGTATTCTTTCTTTTAGAGGCAAATCATGAAGATGTAAAGCACTaGTGCCAGAAAGGAGCTGCTCTTCAGGGTTGCTCTGCTGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: YVFFLLEANHEDVKH*CQKGAALQGCSAEG Trigger: ACCTTCAGCAGAGCAACCCTGAAGAGCAGCTCCTTTCTGGCATCAGTGCTTTACATCTTCATGATTTGCCTCTAAAAGAAAGAATACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR GCA 90 bp | TCCACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTaGCACGCCTGGCTTGCTTTTAATAAGTTTTTGATGGATTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: STCLCLPNARIKGVC*HAWLAFNKFLMDSF Trigger: AAAGGAATCCATCAAAAACTTATTAAAAGCAAGCCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR TCA 90 bp | TCTTGGAGTCGGCTGTCTAGAACTTTAGAGTTTCTGGACTCTTTGTaGAGATATACCCCTGTAAGATCCTTTGAAAAATTGGATGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: SWSRLSRTLEFLDSL*RYTPVRSFEKLDEP Trigger: TGGCTCATCCAATTTTTCAAAGGATCTTACAGGGGTATATCTTCACAAAGAGTCCAGAAACTCTAAAGTTCTAGACAGCCGACTCCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR CCA 90 bp | ACTATTCTTCATGACAAGGTTCTTAGTAGTTTTCACAGCAACTCTTaGATTATGAGGTATAGCAGCAGTTGGCAGCCCAACTTGAAGACT | + |
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Preference number: 1 (lower is better) Translates to: TILHDKVLSSFHSNS*IMRYSSSWQPNLKT Trigger: AGTCTTCAAGTTGGGCTGCCAACTGCTGCTATACCTCATAATCCAAGAGTTGCTGTGAAAACTACTAAGAACCTTGTCATGAAGAATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR TCA 90 bp | TGCTTGGGGAAGGCTTTAGATGTAGGTTTTAAAGTCATAAGTGACTaGGAATTGATCACATCATCTGCTTCCGGTAAATGGCTTCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: CLGKALDVGFKVISD*ELITSSASGKWLPL Trigger: TAAAGGAAGCCATTTACCGGAAGCAGATGATGTGATCAATTCTCAGTCACTTATGACTTTAAAACCTACATCTAAAGCCTTCCCCAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR CCA 90 bp | CTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTaGCTTGCTTTTAATAAGTTTTTGATGGATTCCTTTGATCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: LCLPNARIKGVCCHA*LAFNKFLMDSFDLL Trigger: TAGAAGATCAAAGGAATCCATCAAAAACTTATTAAAAGCAAGCCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR GCA 90 bp | AACCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTaGGATTCCCAAGGAAGCTTCCAATTCCCTTTTGATTTTACATCT | + |
|
Preference number: 1 (lower is better) Translates to: NQTRKMGSTPLLLLL*DSQGSFQFPFDFTS Trigger: AGATGTAAAATCAAAAGGGAATTGGAAGCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR TCA 90 bp | GTGGGGGTATGGAAGCAAACAAACATGATATTGAAGGGACTGGATTaGAACCAAACAGTTGTCTATTTTTCTCTTGATTGGTTAGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: VGVWKQTNMILKGLD*NQTVVYFSLDWLVF Trigger: AAAAACTAACCAATCAAGAGAAAAATAGACAACTGTTTGGTTTCAATCCAGTCCCTTCAATATCATGTTTGTTTGCTTCCATACCCCCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
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| 3UTR-3UTR TCA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCAGAGGAAGAGCTGGGCTaGCTACATTCTGAAACTAGA | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSTREAEPGRFLSSEEELG*LHSETR Trigger: TCTAGTTTCAGAATGTAGTCAGCCCAGCTCTTCCTC...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAGGAGGCAGTAGAGTTCTCATCTTTGTCATGACATGGTCGAAAACTCTGTGCACTCCTGGTGGATaGTCCTCTGGACTCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: FPGGSRVLIFVMTWSKTLCTPGG*SSGLHG Trigger: GCCATGGAGTCCAGAGGATCATCCACCAGGAGTGCA...CAGAGTTTTCGACCATGTCATGACAAAGATGAGAACTCTACTGCCTCCTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCATCTTTCTTAGATAACTaGGATTGGCCTGACACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HAFNPSTREAEPGRFLSSSFLDN*DWPDTL Trigger: GAGAGTGTCAGGCCAATCTCAGTTATCTAAGAAAGA...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCATGCACTCCTGGTGGATaGTCCTCTGGACTCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: PNQKDGIHTITIITVRFPCTPGG*SSGLHG Trigger: GCCATGGAGTCCAGAGGATCATCCACCAGGAGTGCA...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCAGCCAGGCAGATTTCTaGGTTCAAGGCCAGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSSQADF*VQGQPG Trigger: ACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGGCT...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGCCAGGCAGATTTCTaGGTTCAAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PNQKDGIHTITIITVRFPSQADF*VQGQPG Trigger: ACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGGCT...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR CCA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCAAAACATCAGTTTGCTTaGCTCCTGCTAATACTATCA | + |
|
Preference number: 2 (lower is better) Translates to: HAFNPSTREAEPGRFLSSKHQFA*LLLILS Trigger: TGATAGTATTAGCAGGAGCCAAGCAAACTGATGTTT...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGATCTGTAGACCAGGCTaGCCTCTAACACAAGCAATT | + |
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Preference number: 2 (lower is better) Translates to: TCLCLPNARIKGVCCHAWICRPG*PLTQAI Trigger: AATTGCTTGTGTTAGAGGCCAGCCTGGTCTACAGAT...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGGTGTGTTGCCACGCCTaGCTTGCTTTTAATAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: TCLCLPNARIKGVCCHAWVCCHA*LAFNKF Trigger: AAACTTATTAAAAGCAAGCCAGGCGTGGCAACACAC...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGAACGGTTCTTTAACATaGAGGGGAAATACAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: TCLCLPNARIKGVCCHAWNGSLT*RGNTAI Trigger: AATGGCTGTATTTCCCCTTCATGTTAAAGAACCGTT...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATAACGGTTCTTTAACATaGAGGGGAAATACAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: PGCPGISSIYQASLEFRDNGSLT*RGNTAI Trigger: AATGGCTGTATTTCCCCTTCATGTTAAAGAACCGTT...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAGGAGGCAGTAGAGTTCTCATCTTTGTCATGACATGGTCGAAAACTCTGGTGCCCGTGAACTTCTaGATGTATATAAGGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: FPGGSRVLIFVMTWSKTLVPVNF*MYIRSD Trigger: GTCACTCCTTATATACATTCAGAAGTTCACGGGCAC...CAGAGTTTTCGACCATGTCATGACAAAGATGAGAACTCTACTGCCTCCTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGCTTCTGAGAACTGTGTTTCATTTCTGGAGCAGTATACTTTGATTTCCCCTTCCTTTGGTCTCTaGCAGCTGTTTCTGGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: GCASENCVSFLEQYTLISPSFGL*QLFLVD Trigger: GTCTACCAGAAACAGCTGTCAGAGACCAAAGGAAGG...GGAAATCAAAGTATACTGCTCCAGAAATGAAACACAGTTCTCAGAAGCACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATTTTCTGGACTCTTTGTaGAGATATACCCCTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: PGCPGISSIYQASLEFRDFLDSL*RYTPVR Trigger: TCTTACAGGGGTATATCTTCACAAAGAGTCCAGAAA...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCATGGAGCAGTATACTTTaGTTTCCAGGACCCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PNQKDGIHTITIITVRFPWSSIL*FPGPWS Trigger: GCTCCAGGGTCCTGGAAATCAAAGTATACTGCTCCA...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGTACCAAACATCAGTTTaGTTGGCTCCTGCTAATACT | + |
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Preference number: 2 (lower is better) Translates to: TCLCLPNARIKGVCCHAWYQTSV*LAPANT Trigger: AGTATTAGCAGGAGCCAAGCAAACTGATGTTTGGTA...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATTTACTGCTTTGTCACTaGAAGAATAAGGTAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PGCPGISSIYQASLEFRDLLLCH*KNKVRK Trigger: CTTCCTTACCTTATTCTTTCAGTGACAAAGCAGTAA...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR CAA 90 bp | TTCATTTCTGGAGCAGTATACTTTGATTTCCAGGACCCTGGAGCATaGTCTTCATCTGAGGAATCTCTCTCGAGGCAAACACTATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FISGAVYFDFQDPGA*SSSEESLSRQTLFF Trigger: GAAGAATAGTGTTTGCCTCGAGAGAGATTCCTCAGATGAAGACAATGCTCCAGGGTCCTGGAAATCAAAGTATACTGCTCCAGAAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAGTGCCCGTGAACTTCTaGATGTATATAAGGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: PNQKDGIHTITIITVRFPVPVNF*MYIRSD Trigger: GTCACTCCTTATATACATTCAGAAGTTCACGGGCAC...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCATTAAAGGTGTGTGTTaGCACGCCTGGCTTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSIKGVC*HAWLAF Trigger: AAAAGCAAGCCAGGCGTGGCAACACACACCTTTAAT...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGGAGGCAGTAGAGTTCTCATCTTTGTCATGACATGGTCGAAAACTCTGGATCCTTTGAAAAATTaGATGAGCCATCAGAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: FPGGSRVLIFVMTWSKTLDPLKN*MSHQSY Trigger: GTAGCTCTGATGGCTCATCCAATTTTTCAAAGGATC...CAGAGTTTTCGACCATGTCATGACAAAGATGAGAACTCTACTGCCTCCTGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGGAGGCAGTAGAGTTCTCATCTTTGTCATGACATGGTCGAAAACTCTGTTTCACAGCAACTCTTaGATTATGAGGTATAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FPGGSRVLIFVMTWSKTLFHSNS*IMRYSS Trigger: GCTGCTATACCTCATAATCCAAGAGTTGCTGTGAAA...CAGAGTTTTCGACCATGTCATGACAAAGATGAGAACTCTACTGCCTCCTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCATACCAAACATCAGTTTaGTTGGCTCCTGCTAATACT | + |
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Preference number: 2 (lower is better) Translates to: PNQKDGIHTITIITVRFPYQTSV*LAPANT Trigger: AGTATTAGCAGGAGCCAAGCAAACTGATGTTTGGTA...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTGCTTCTGAGAACTGTGTTTCATTTCTGGAGCAGTATACTTTGATTTCCTCAATGGTACTCAACTaGAGATCAGTAATCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: GCASENCVSFLEQYTLISSMVLN*RSVITE Trigger: CTCTGTGATTACTGATCTGCAGTTGAGTACCATTGA...GGAAATCAAAGTATACTGCTCCAGAAATGAAACACAGTTCTCAGAAGCACAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAGAGAAAGTGTTTCTTTaGACTGCTGGAGAATTACTA | + |
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Preference number: 2 (lower is better) Translates to: PNQKDGIHTITIITVRFPEKVFL*TAGELL Trigger: TAGTAATTCTCCAGCAGTTCAAAGAAACACTTTCTC...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGCTTCTGAGAACTGTGTTTCATTTCTGGAGCAGTATACTTTGATTTCCTTTAGAGGCAAATCATaGAGATGTAAAGCACTGATG | + |
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Preference number: 2 (lower is better) Translates to: GCASENCVSFLEQYTLISFRGKS*RCKALM Trigger: CATCAGTGCTTTACATCTTCATGATTTGCCTCTAAA...GGAAATCAAAGTATACTGCTCCAGAAATGAAACACAGTTCTCAGAAGCACAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCTTACTATTATTACTGTaGGATTCCCAAGGAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSLLLLL*DSQGSF Trigger: GAAGCTTCCTTGGGAATCGCACAGTAATAATAGTAA...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| 3UTR-3UTR CCA 90 bp | GGTATGGAAGCAAACAAACATGATATTGAAGGGACTGGATTGAAACCAAACAGTGTGTGTTGCCACGCCTaGCTTGCTTTTAATAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: GMEANKHDIEGTGLKPNSVCCHA*LAFNKF Trigger: AAACTTATTAAAAGCAAGCCAGGCGTGGCAACACAC...ACTGTTTGGTTTCAATCCAGTCCCTTCAATATCATGTTTGTTTGCTTCCATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTAGTAGTTTTCACAGCAACTCTTGGATTATGAGGTATAGCAGCAGTTGGAAACATCAGTTTGCTTaGCTCCTGCTAATACTATCA | + |
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Preference number: 2 (lower is better) Translates to: VLSSFHSNSWIMRYSSSWKHQFA*LLLILS Trigger: TGATAGTATTAGCAGGAGCCAAGCAAACTGATGTTT...CCAACTGCTGCTATACCTCATAATCCAAGAGTTGCTGTGAAAACTACTAAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTAGTAGTTTTCACAGCAACTCTTGGATTATGAGGTATAGCAGCAGTTGGACTGGAAGTCTTTACTaGTTTGTCACTGAAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: VLSSFHSNSWIMRYSSSWTGSLY*FVTERI Trigger: TATTCTTTCAGTGACAAAGCAGTAAAGACTTCCAGT...CCAACTGCTGCTATACCTCATAATCCAAGAGTTGCTGTGAAAACTACTAAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCCCATTGCTGTCTTCATACTGGCTAAAAATGCAATTGACCATAAATATGAGGAATAAGGAAGTGTaGATTCTCCGATTTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: VFPLLSSYWLKMQLTINMRNKEV*ILRFSQ Trigger: TTGGGAAAATCGGAGAATTCACACTTCCTTATTCCT...CATATTTATGGTCAATTGCATTTTTAGCCAGTATGAAGACAGCAATGGGAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
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| 3UTR TCA 72 bp | ATGCCAGAAAGGAGCTGCTCTTCAGGGTTGCTCTGCTaGAGGTCTCTACCGGACCCTTCACTGTCTGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: MPERSCSSGLLC*RSLPDPSLSEV Trigger: GACCTCAGACAGTGAAGGGTCCGGTAGAGACCTTCAGCAGAGCAACCCTGAAGAGCAGCTCCTTTCTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
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| 3UTR CCA 72 bp | CACTCTCCATACCAGAGAATGATTCTGCACTCCTGGTaGATGATCCTCTGGACTCCATGGCCCTCTTACATG | + |
|
Preference number: 3 (lower is better) Translates to: HSPYQRMILHSW*MILWTPWPSYM Trigger: CATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCACCAGGAGTGCAGAATCATTCTCTGGTATGGAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR CCA 72 bp | CCTTGGCTGTTCTGGAACTTGATCTGTAGACCAGGCTaGCCTCTAACACAAGCAATTCGCCTACCTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: PWLFWNLICRPG*PLTQAIRLPLP Trigger: AGGTAGAGGTAGGCGAATTGCTTGTGTTAGAGGCCAGCCTGGTCTACAGATCAAGTTCCAGAACAGCCAAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGAGTTCACAACCACCCTaGACCACACATCATCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TCLCLPNARIKGVCCHAWSSQPP*TTHHPL Trigger: AAGCGGATGATGTGTGGTCAAGGGTGGTTGTGAACT...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGAATTCAGAGATCCACTaGCCTTTGCCTTCCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: TCLCLPNARIKGVCCHAWNSEIH*PLPSKC Trigger: GCATTTGGAAGGCAAAGGCAAGTGGATCTCTGAATT...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCTCTACCAGGCCAGCCTaGAATTCAGAGATCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSSTRPA*NSEIHL Trigger: CAAGTGGATCTCTGAATTCAAGGCTGGCCTGGTAGA...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGTGCTTCTGAGAACTGTGTTTCATTTCTGGAGCAGTATACTTTGATTTCCTTCTGTTTCCTTCCTTaGGTCTCTGACAGCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GCASENCVSFLEQYTLISFCFLP*VSDSCF Trigger: GAAACAGCTGTCAGAGACCAAAGGAAGGAAACAGAA...GGAAATCAAAGTATACTGCTCCAGAAATGAAACACAGTTCTCAGAAGCACAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| 3UTR TCA 72 bp | ATTTTTCATACTTTTCTGTTTCCTTCCTTTGGTCTCTaGCAGCTGTTTCTGGTAGACAGCCACAGCATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IFHTFLFPSFGL*QLFLVDSHSIR Trigger: CCTGATGCTGTGGCTGTCTACCAGAAACAGCTGTCAGAGACCAAAGGAAGGAAACAGAAAAGTATGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| 3UTR TCA 72 bp | TTTCTTTTAGAGGCAAATCATGAAGATGTAAAGCACTaGTGCCAGAAAGGAGCTGCTCTTCAGGGTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLLEANHEDVKH*CQKGAALQGCS Trigger: AGAGCAACCCTGAAGAGCAGCTCCTTTCTGGCATCAGTGCTTTACATCTTCATGATTTGCCTCTAAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| 3UTR TCA 72 bp | CAACTTGAAGACTGGAAGTCTTTACTGCTTTGTCACTaGAAGAATAAGGTAAGGAAGTATTCGCCCCGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QLEDWKSLLLCH*KNKVRKYSPRS Trigger: ACTGCGGGGCGAATACTTCCTTACCTTATTCTTTCAGTGACAAAGCAGTAAAGACTTCCAGTCTTCAAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| 3UTR GCA 72 bp | CTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTaGCACGCCTGGCTTGCTTTTAATAAGTTTTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LCLPNARIKGVC*HAWLAFNKFLM Trigger: CATCAAAAACTTATTAAAAGCAAGCCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCCCATTGCTGTCTTCATACTGGCTAAAAATGCAATTGACCATAAATATGTCTACCAGGCCAGCCTaGAATTCAGAGATCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: VFPLLSSYWLKMQLTINMSTRPA*NSEIHL Trigger: CAAGTGGATCTCTGAATTCAAGGCTGGCCTGGTAGA...CATATTTATGGTCAATTGCATTTTTAGCCAGTATGAAGACAGCAATGGGAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAGACTCATTACACAGTTaGGTTTCTTTAGATTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: PNQKDGIHTITIITVRFPDSLHS*VSLDST Trigger: AGTGGAATCTAAAGAAACCAAACTGTGTAATGAGTC...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| 3UTR GCA 72 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTaGGATTCCCAAGGAAGCTTCCAATTCCCTTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RKMGSTPLLLLL*DSQGSFQFPFD Trigger: ATCAAAAGGGAATTGGAAGCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR TCA 72 bp | TTAAAATATTTCCTGCTTGCAGTGCCCGTGAACTTCTaGATGTATATAAGGAGTGACTTTCCTTATCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKYFLLAVPVNF*MYIRSDFPYPE Trigger: CTCTGGATAAGGAAAGTCACTCCTTATATACATTCAGAAGTTCACGGGCACTGCAAGCAGGAAATATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTATTCAATGAGGGGGAAGTAGATTCCTGTGCTAAAATAGGATCTGGAGAAATTAATTTTGGGATTTaGCTTGGGGAAGGCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KLFNEGEVDSCAKIGSGEINFGI*LGEGFR Trigger: TCTAAAGCCTTCCCCAAGCAAAATCCCAAAATTAAT...TTCTCCAGATCCTATTTTAGCACAGGAATCTACTTCCCCCTCATTGAATAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| 3UTR TCA 72 bp | AAGGCTTTAGATGTAGGTTTTAAAGTCATAAGTGACTaGGAATTGATCACATCATCTGCTTCCGGTAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: KALDVGFKVISD*ELITSSASGKW Trigger: CCATTTACCGGAAGCAGATGATGTGATCAATTCTCAGTCACTTATGACTTTAAAACCTACATCTAAAGCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| 3UTR GCA 72 bp | CAGATACTCATGTACATTTTCTACCAAACATCAGTTTaGTTGGCTCCTGCTAATACTATCAGCATTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QILMYIFYQTSV*LAPANTISIQT Trigger: TGTTTGAATGCTGATAGTATTAGCAGGAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR TCA 72 bp | TGGAAGCAAACAAACATGATATTGAAGGGACTGGATTaGAACCAAACAGTTGTCTATTTTTCTCTTGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: WKQTNMILKGLD*NQTVVYFSLDW Trigger: CCAATCAAGAGAAAAATAGACAACTGTTTGGTTTCAATCCAGTCCCTTCAATATCATGTTTGTTTGCTTCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| 3UTR TCA 72 bp | AAGTATTATAAAATCCACTTTGAGTGTTCTGGAACCTaGGTTTTAACCTCTGGCGTAAAGGTAGAGGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: KYYKIHFECSGT*VLTSGVKVEDF Trigger: AAAATCCTCTACCTTTACGCCAGAGGTTAAAACTCAGGTTCCAGAACACTCAAAGTGGATTTTATAATACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCACATCGCCGTCGTTGGTaGGGCAGCCATCCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSTREAEPGRFLSSHRRRW*GSHPHG Trigger: GCCATGTGGATGGCTGCCTCACCAACGACGGCGATG...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCCCCGGCGGCCTGGACCCAGGGCATTCCCAGGCACTCGAGCATTTCAAGGACAGGCTCTAGAATTTaGCATAAGTCATTCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPAAWTQGIPRHSSISRTGSRI*HKSFTP Trigger: GGGAGTGAATGACTTATGGCAAATTCTAGAGCCTGT...CCTTGAAATGCTCGAGTGCCTGGGAATGCCCTGGGTCCAGGCCGCCGGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218259.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGCATCGCCGTCGTTGGTaGGGCAGCCATCCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCLCLPNARIKGVCCHAWHRRRW*GSHPHG Trigger: GCCATGTGGATGGCTGCCTCACCAACGACGGCGATG...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCCCCGGCGGCCTGGACCCAGGGCATTCCCAGGCACTCGAGCATTTCAAGGTGCAAGTGGATATGTTaGTTTACAGGCTCTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ASPAAWTQGIPRHSSISRCKWIC*FTGSRI Trigger: AATTCTAGAGCCTGTAAAGCAACATATCCACTTGCA...CCTTGAAATGCTCGAGTGCCTGGGAATGCCCTGGGTCCAGGCCGCCGGGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218259.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATCCTTCCTTTGGTCTCTaGCAGCTGTTTCTGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDPSFGL*QLFLVD Trigger: GTCTACCAGAAACAGCTGTCAGAGACCAAAGGAAGG...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR GCA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCAACAGGCTCTAGAATTTaGCATAAGTCATTCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSTREAEPGRFLSSTGSRI*HKSFTP Trigger: GGGAGTGAATGACTTATGGCAAATTCTAGAGCCTGT...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR GCA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCACAACAATTTTTCACATaGATAGTGACTGGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSTREAEPGRFLSSQQFFT*IVTGPL Trigger: GAGTGGCCCAGTCACTATGCATGTGAAAAATTGTTG...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGCTATTATGGTCTGTCTaGTGCCATTCACAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCLCLPNARIKGVCCHAWLLWSV*CHSQGQ Trigger: CTGCCCTTGTGAATGGCATCAGACAGACCATAATAG...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATGTTGGCAGCCCAACTTaGAGACTGGAAGTCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDVGSPT*RLEVFT Trigger: AGTAAAGACTTCCAGTCTTCAAGTTGGGCTGCCAAC...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATATCAGCTTTCAGCATTaGTGGCTCCCCTTCCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDISFQH*WLPFHY Trigger: GTAATGGAAGGGGAGCCACCAATGCTGAAAGCTGAT...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR CAA 72 bp | GCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTaGAATTCAGAGATCCACTTGCCTTTGCCTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVLELALSTRPA*NSEIHLPLPSK Trigger: TTTGGAAGGCAAAGGCAAGTGGATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATGAGTCCTCTTGCTTATaGCATCAGCTTTCAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDESSCL*HQLSAL Trigger: CAATGCTGAAAGCTGATGTCATAAGCAAGAGGACTC...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATTGTTTTCTGAGACCTTaGTTTTCCAGAAGGCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDCFLRP*FSRRPV Trigger: TACGGGCCTTCTGGAAAATCAAGGTCTCAGAAAACA...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCACTTACTCTTGATAGATaGTATCGTGTAACAGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSTREAEPGRFLSSLTLDR*YRVTVN Trigger: GTTGACTGTTACACGATATCATCTATCAAGAGTAAG...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATAGCTTTCAGCATTGGTaGCTCCCCTTCCATTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDSFQHW*LPFHYK Trigger: TTTGTAATGGAAGGGGAGCCACCAATGCTGAAAGCT...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCCCACAAAAGATACTGCAACACTATTATAAAGTGTTGCCATCTTGGGCATCCATTACGTTCATaGTCCTTTGGCGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAHKRYCNTIIKCCHLGHPLRS*SFGEPG Trigger: CCCAGGTTCGCCAAAGGATCATGAACGTAATGGATG...CCCAAGATGGCAACACTTTATAATAGTGTTGCAGTATCTTTTGTGGGCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGAAAGGAACTCTTGGATaGCCTCATGGAATGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TCLCLPNARIKGVCCHAWKGTLG*PHGMEI Trigger: GATTTCCATTCCATGAGGTCATCCAAGAGTTCCTTT...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CCA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTAGCTTTCAGCATTGGTaGCTCCCCTTCCATTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VDDPLDSMALLHAVIIGISFQHW*LPFHYK Trigger: TTTGTAATGGAAGGGGAGCCACCAATGCTGAAAGCT...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| 3UTR CAA 72 bp | GGAGTGACTTTCCTTATCCAGAGTTCACAACCACCCTaGACCACACATCATCCGCTTCCATTTTCACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVTFLIQSSQPP*TTHHPLPFSLL Trigger: GAGAAGTGAAAATGGAAGCGGATGATGTGTGGTCAAGGGTGGTTGTGAACTCTGGATAAGGAAAGTCACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTACTAGGCTGTGCTTCTaGGAACTGTGTTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDDPLDSMALLHAVIIGITRLCF*ELCFIS Trigger: AGAAATGAAACACAGTTCTCAGAAGCACAGCCTAGT...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATGATCCTTTGAAAAATTaGATGAGCCATCAGAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDDPLKN*MSHQSY Trigger: GTAGCTCTGATGGCTCATCCAATTTTTCAAAGGATC...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CCA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTGCCCAACTTGAAGACTaGAAGTCTTTACTGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VDDPLDSMALLHAVIIGIAQLED*KSLLLC Trigger: ACAAAGCAGTAAAGACTTCCAGTCTTCAAGTTGGGC...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATCCTTTGTGTTCATCGTaGAATTTCTGTAAACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDPLCSS*NFCKQS Trigger: AGACTGTTTACAGAAATTTCACGATGAACACAAAGG...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATCTTACTCTTGATAGATaGTATCGTGTAACAGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDLTLDR*YRVTVN Trigger: GTTGACTGTTACACGATATCATCTATCAAGAGTAAG...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCACTATTATGGTCTGTCTaGTGCCATTCACAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNQKDGIHTITIITVRFPLLWSV*CHSQGQ Trigger: CTGCCCTTGTGAATGGCATCAGACAGACCATAATAG...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGTTACTGCTTTGTCACTaGAAGAATAAGGTAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCLCLPNARIKGVCCHAWLLLCH*KNKVRK Trigger: CTTCCTTACCTTATTCTTTCAGTGACAAAGCAGTAA...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAGCAACTCTTGGATTATaGGGTATAGCAGCAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNQKDGIHTITIITVRFPATLGL*GIAAVG Trigger: GCCAACTGCTGCTATACCTCATAATCCAAGAGTTGC...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATTGCAAGTGGATATGTTaGTTTACAGGCTCTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PGCPGISSIYQASLEFRDCKWIC*FTGSRI Trigger: AATTCTAGAGCCTGTAAAGCAACATATCCACTTGCA...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR GCA 90 bp | GGTATGGAAGCAAACAAACATGATATTGAAGGGACTGGATTGAAACCAAACAGTATGCCAGAAAGGAGCTaGTCTTCAGGGTTGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GMEANKHDIEGTGLKPNSMPERS*SSGLLC Trigger: GCAGAGCAACCCTGAAGAGCAGCTCCTTTCTGGCAT...ACTGTTTGGTTTCAATCCAGTCCCTTCAATATCATGTTTGTTTGCTTCCATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAATCAGCTTTCAGCATTaGTGGCTCCCCTTCCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PNQKDGIHTITIITVRFPISFQH*WLPFHY Trigger: GTAATGGAAGGGGAGCCACCAATGCTGAAAGCTGAT...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CCA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTTTTCACAGCAACTCTTaGATTATGAGGTATAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VDDPLDSMALLHAVIIGIFHSNS*IMRYSS Trigger: GCTGCTATACCTCATAATCCAAGAGTTGCTGTGAAA...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| 3UTR CAA 72 bp | TGGATTATGAGGTATAGCAGCAGTTGGCAGCCCAACTaGAAGACTGGAAGTCTTTACTGCTTTGTCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WIMRYSSSWQPN*KTGSLYCFVTE Trigger: TTCAGTGACAAAGCAGTAAAGACTTCCAGTCTTCAAGTTGGGCTGCCAACTGCTGCTATACCTCATAATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCGAGTCCTCTTGCTTATaGCATCAGCTTTCAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSESSCL*HQLSAL Trigger: CAATGCTGAAAGCTGATGTCATAAGCAAGAGGACTC...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCTGTTTTCTGAGACCTTaGTTTTCCAGAAGGCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSCFLRP*FSRRPV Trigger: TACGGGCCTTCTGGAAAATCAAGGTCTCAGAAAACA...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCCCACAAAAGATACTGCAACACTATTATAAAGTGTTGCCATCTTGGGGATCTCCCTGTTTTCTaGGACCTTGATTTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRAHKRYCNTIIKCCHLGDLPVF*DLDFPE Trigger: TTCTGGAAAATCAAGGTCTCAGAAAACAGGGAGATC...CCCAAGATGGCAACACTTTATAATAGTGTTGCAGTATCTTTTGTGGGCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTGAGAAAGTGTTTCTTTaGACTGCTGGAGAATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: VDDPLDSMALLHAVIIGIEKVFL*TAGELL Trigger: TAGTAATTCTCCAGCAGTTCAAAGAAACACTTTCTC...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR GCA 90 bp | TTAAACAGCAGATACTCATGTACATTTTCTACCAAACATCAGTTTGCTTGGCTCGCTGCTCTTCAGGGTTaGTCTGCTGAAGGTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LNSRYSCTFSTKHQFAWLAALQG*SAEGLY Trigger: GTAGAGACCTTCAGCAGAGCAACCCTGAAGAGCAGC...GAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTATCTGCTGTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR TCA 90 bp | TTAAACAGCAGATACTCATGTACATTTTCTACCAAACATCAGTTTGCTTGGCTCCATCCATTACGTTCATaGTCCTTTGGCGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSRYSCTFSTKHQFAWLHPLRS*SFGEPG Trigger: CCCAGGTTCGCCAAAGGATCATGAACGTAATGGATG...GAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTATCTGCTGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR GCA 90 bp | GGTATGGAAGCAAACAAACATGATATTGAAGGGACTGGATTGAAACCAAACAGTTTTCTTCACTGTCTGTaGCTCGCATACCCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GMEANKHDIEGTGLKPNSFLHCL*LAYPET Trigger: AGTCTCTGGGTATGCGAGGCACAGACAGTGAAGAAA...ACTGTTTGGTTTCAATCCAGTCCCTTCAATATCATGTTTGTTTGCTTCCATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR GCA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTACTGGAAGTCTTTACTaGTTTGTCACTGAAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VDDPLDSMALLHAVIIGITGSLY*FVTERI Trigger: TATTCTTTCAGTGACAAAGCAGTAAAGACTTCCAGT...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCATCTTGGATGACCTCATaGAATGGAAATCCTTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNQKDGIHTITIITVRFPSWMTS*NGNPSQ Trigger: TTGCGAAGGATTTCCATTCCATGAGGTCATCCAAGA...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGCCCACAAAAGATACTGCAACACTATTATAAAGTGTTGCCATCTTGGGTTGGCTGTAGTTGATTaGAGGTCTTTCTACCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRAHKRYCNTIIKCCHLGLAVVD*RSFYHV Trigger: AACATGGTAGAAAGACCTCCAATCAACTACAGCCAA...CCCAAGATGGCAACACTTTATAATAGTGTTGCAGTATCTTTTGTGGGCCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CCA 90 bp | GGTATGGAAGCAAACAAACATGATATTGAAGGGACTGGATTGAAACCAAACAGTCATGGGAGGAAGAGCTaGGCTGACTACATTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GMEANKHDIEGTGLKPNSHGRKS*ADYILK Trigger: TTTCAGAATGTAGTCAGCCCAGCTCTTCCTCCCATG...ACTGTTTGGTTTCAATCCAGTCCCTTCAATATCATGTTTGTTTGCTTCCATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCCCACAAAAGATACTGCAACACTATTATAAAGTGTTGCCATCTTGGGCAGGTCTTTGGTATGTaGTCGGTTTCAACATTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GRAHKRYCNTIIKCCHLGQVFGM*SVSTFY Trigger: ATAAAATGTTGAAACCGATCACATACCAAAGACCTG...CCCAAGATGGCAACACTTTATAATAGTGTTGCAGTATCTTTTGTGGGCCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCTTTCTGGACTCTTTGTaGAGATATACCCCTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSFLDSL*RYTPVR Trigger: TCTTACAGGGGTATATCTTCACAAAGAGTCCAGAAA...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CCA 90 bp | GGTATGGAAGCAAACAAACATGATATTGAAGGGACTGGATTGAAACCAAACAGTGATGACCTCATGGAATaGAAATCCTTCGCAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GMEANKHDIEGTGLKPNSDDLME*KSFATA Trigger: TGCAGTTGCGAAGGATTTCCATTCCATGAGGTCATC...ACTGTTTGGTTTCAATCCAGTCCCTTCAATATCATGTTTGTTTGCTTCCATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR TCA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCACCTTTGTGTTCATCGTaGAATTTCTGTAAACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNQKDGIHTITIITVRFPPLCSS*NFCKQS Trigger: AGACTGTTTACAGAAATTTCACGATGAACACAAAGG...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCCAGGTCTTTGGTATGTaGTCGGTTTCAACATTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSQVFGM*SVSTFY Trigger: ATAAAATGTTGAAACCGATCACATACCAAAGACCTG...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCCATTGCTGTCTTCATACTGGCTAAAAATGCAATTGACCATAAATATGGAGGAAGAGCTGGGCTaGCTACATTCTGAAACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFPLLSSYWLKMQLTINMEEELG*LHSETR Trigger: TCTAGTTTCAGAATGTAGTCAGCCCAGCTCTTCCTC...CATATTTATGGTCAATTGCATTTTTAGCCAGTATGAAGACAGCAATGGGAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CCA 90 bp | GTTTTCCCATTGCTGTCTTCATACTGGCTAAAAATGCAATTGACCATAAATATGAGGTATAGCAGCAGTTaGCAGCCCAACTTGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VFPLLSSYWLKMQLTINMRYSSS*QPNLKT Trigger: AGTCTTCAAGTTGGGCTGCCAACTGCTGCTATACCT...CATATTTATGGTCAATTGCATTTTTAGCCAGTATGAAGACAGCAATGGGAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR TCA 90 bp | TTAAACAGCAGATACTCATGTACATTTTCTACCAAACATCAGTTTGCTTGGCTCAAAGGAACTCTTGGATaGCCTCATGGAATGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LNSRYSCTFSTKHQFAWLKGTLG*PHGMEI Trigger: GATTTCCATTCCATGAGGTCATCCAAGAGTTCCTTT...GAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTATCTGCTGTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAACAGCAGATACTCATGTACATTTTCTACCAAACATCAGTTTGCTTGGCTCTTGGCTGTAGTTGATTaGAGGTCTTTCTACCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNSRYSCTFSTKHQFAWLLAVVD*RSFYHV Trigger: AACATGGTAGAAAGACCTCCAATCAACTACAGCCAA...GAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTATCTGCTGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAACAGCAGATACTCATGTACATTTTCTACCAAACATCAGTTTGCTTGGCTCTCTATTTCAAGACAATaGACTCCATTTCTGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSRYSCTFSTKHQFAWLSISRQ*TPFLTR Trigger: CCGAGTCAGAAATGGAGTCCATTGTCTTGAAATAGA...GAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTATCTGCTGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| 3UTR CAA 72 bp | AAGTTCCAGAAGCATTTATTGAGACTTGTTTTCCCATaGCTGTCTTCATACTGGCTAAAAATGCAATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KFQKHLLRLVFP*LSSYWLKMQLT Trigger: GGTCAATTGCATTTTTAGCCAGTATGAAGACAGCAATGGGAAAACAAGTCTCAATAAATGCTTCTGGAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR GCA 90 bp | GTTTTCCCATTGCTGTCTTCATACTGGCTAAAAATGCAATTGACCATAAATATGTCAATGGTACTCAACTaGAGATCAGTAATCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFPLLSSYWLKMQLTINMSMVLN*RSVITE Trigger: CTCTGTGATTACTGATCTGCAGTTGAGTACCATTGA...CATATTTATGGTCAATTGCATTTTTAGCCAGTATGAAGACAGCAATGGGAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCCATTGCTGTCTTCATACTGGCTAAAAATGCAATTGACCATAAATATGTTTAGAGGCAAATCATaGAGATGTAAAGCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VFPLLSSYWLKMQLTINMFRGKS*RCKALM Trigger: CATCAGTGCTTTACATCTTCATGATTTGCCTCTAAA...CATATTTATGGTCAATTGCATTTTTAGCCAGTATGAAGACAGCAATGGGAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| 3UTR CAA 72 bp | ATACTCATGTACATTTTCTACCAAACATCAGTTTGCTaGGCTCCTGCTAATACTATCAGCATTCAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: ILMYIFYQTSVC*APANTISIQTH Trigger: ATGTGTTTGAATGCTGATAGTATTAGCAGGAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGCCCACAAAAGATACTGCAACACTATTATAAAGTGTTGCCATCTTGGGAAAGCATCGCCGTCGTaGGTGAGGCAGCCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GRAHKRYCNTIIKCCHLGKASPS*VRQPST Trigger: TGTGGATGGCTGCCTCACCAACGACGGCGATGCTTT...CCCAAGATGGCAACACTTTATAATAGTGTTGCAGTATCTTTTGTGGGCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTCATCAGCTTTCAGCATaGGTGGCTCCCCTTCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: VDDPLDSMALLHAVIIGIHQLSA*VAPLPL Trigger: TAATGGAAGGGGAGCCACCAATGCTGAAAGCTGATG...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAAAGCATCGCCGTCGTaGGTGAGGCAGCCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PNQKDGIHTITIITVRFPKASPS*VRQPST Trigger: TGTGGATGGCTGCCTCACCAACGACGGCGATGCTTT...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | GTGGATGATCCTCTGGACTCCATGGCCCTCTTACATGCTGTGATTATAGGCATTCTGGAGCAGTATACTTaGATTTCCAGGACCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VDDPLDSMALLHAVIIGILEQYT*ISRTLE Trigger: CTCCAGGGTCCTGGAAATCAAAGTATACTGCTCCAG...AATGCCTATAATCACAGCATGTAAGAGGGCCATGGAGTCCAGAGGATCATCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CAA 90 bp | ACTTGCCTTTGCCTTCCAAATGCTAGGATTAAAGGTGTGTGTTGCCACGCCTGGTTCTGTTTCCTTCCTTaGGTCTCTGACAGCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TCLCLPNARIKGVCCHAWFCFLP*VSDSCF Trigger: GAAACAGCTGTCAGAGACCAAAGGAAGGAAACAGAA...CCAGGCGTGGCAACACACACCTTTAATCCTAGCATTTGGAAGGCAAAGGCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS-3UTR CAA 90 bp | CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGCCAGGCAGATTTCTGAGTTCAGACTCATTACACAGTTaGGTTTCTTTAGATTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HAFNPSTREAEPGRFLSSDSLHS*VSLDST Trigger: AGTGGAATCTAAAGAAACCAAACTGTGTAATGAGTC...TGAACTCAGAAATCTGCCTGGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS TCA 90 bp | TTGATTTTCCAGAAGGCCCGTAACGAGTCTGAGTCCTCTTGCTTATaGCATCAGCTTTCAGCATTGGTGGCTCCCCTTCCATTACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LIFQKARNESESSCL*HQLSALVAPLPLQT Trigger: TGTTTGTAATGGAAGGGGAGCCACCAATGCTGAAAGCTGATGTCATAAGCAAGAGGACTCAGACTCGTTACGGGCCTTCTGGAAAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 ENSMUST00000219600.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAAGGAAGCTACGTTCATGATCCTTaGGCGAACCTGGGTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RKMGSTPLLLLLCDSQGSYVHDP*ANLGGN Trigger: GTTCCCACCCAGGTTCGCCAAAGGATCATGAACGTA...GCTTCCTTGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCTTCTGAGAACTGTGTTTCATTTCTGGAGCAGTATACTTTGATTTCCTACGTTCATGATCCTTaGGCGAACCTGGGTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GCASENCVSFLEQYTLISYVHDP*ANLGGN Trigger: GTTCCCACCCAGGTTCGCCAAAGGATCATGAACGTA...GGAAATCAAAGTATACTGCTCCAGAAATGAAACACAGTTCTCAGAAGCACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCACATCAGCTTTCAGCATaGGTGGCTCCCCTTCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: PNQKDGIHTITIITVRFPHQLSA*VAPLPL Trigger: TAATGGAAGGGGAGCCACCAATGCTGAAAGCTGATG...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATCCTCTGAAGCAAACTTaGACCTTTGAAAATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGCPGISSIYQASLEFRDPLKQT*TFENLQ Trigger: TTGCAGATTTTCAAAGGTCAAAGTTTGCTTCAGAGG...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTGTCCTGGAATTAGCTCTATCTACCAGGCCAGCCTTGAATTCAGAGATATTATAAAATCCACTTaGAGTGTTCTGGAACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGCPGISSIYQASLEFRDIIKST*SVLEPE Trigger: CTCAGGTTCCAGAACACTCAAAGTGGATTTTATAAT...ATCTCTGAATTCAAGGCTGGCCTGGTAGATAGAGCTAATTCCAGGACAGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
||
| CDS CCA 90 bp | ACGAGTCTGAGTCCTCTTGCTTATGACATCAGCTTTCAGCATTGGTaGCTCCCCTTCCATTACAAACACCAGTTTTACATTCATTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TSLSPLAYDISFQHW*LPFHYKHQFYIHLS Trigger: ACTCAAATGAATGTAAAACTGGTGTTTGTAATGGAAGGGGAGCCACCAATGCTGAAAGCTGATGTCATAAGCAAGAGGACTCAGACTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000219600.2 |
||
| CDS CCA 90 bp | GTAACGAGTCTGAGTCCTCTTGCTTATGACATCAGCTTTCAGCATTaGTGGCTCCCCTTCCATTACAAACACCAGTTTTACATTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTSLSPLAYDISFQH*WLPFHYKHQFYIHL Trigger: CAAATGAATGTAAAACTGGTGTTTGTAATGGAAGGGGAGCCACCAATGCTGAAAGCTGATGTCATAAGCAAGAGGACTCAGACTCGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000219600.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGCCCACAAAAGATACTGCAACACTATTATAAAGTGTTGCCATCTTGGGATTCAAAAGGAACTCTaGGATGACCTCATGGAATGG | + |
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Preference number: 5 (lower is better) Translates to: GRAHKRYCNTIIKCCHLGIQKEL*DDLMEW Trigger: CCATTCCATGAGGTCATCCAAGAGTTCCTTTTGAAT...CCCAAGATGGCAACACTTTATAATAGTGTTGCAGTATCTTTTGTGGGCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| CDS GCA 90 bp | ACCCAGAGACTCAAATCAACGGCAATGGTTTTCCCACTAAGATCTTaGAAGTGGATATGTTGCTTTACAGGCTCTAGAATTTGCCATAAG | + |
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Preference number: 5 (lower is better) Translates to: TQRLKSTAMVFPLRS*KWICCFTGSRICHK Trigger: CTTATGGCAAATTCTAGAGCCTGTAAAGCAACATATCCACTTGCAAGATCTTAGTGGGAAAACCATTGCCGTTGATTTGAGTCTCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218259.2 ENSMUST00000219600.2 |
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| CDS-3UTR CAA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAATTCAAAAGGAACTCTaGGATGACCTCATGGAATGG | + |
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Preference number: 5 (lower is better) Translates to: PNQKDGIHTITIITVRFPIQKEL*DDLMEW Trigger: CCATTCCATGAGGTCATCCAAGAGTTCCTTTTGAAT...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218547.2 |
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| CDS CCA 90 bp | AGACTCAAATCAACGGCAATGGTTTTCCCACTAAGATCTTGCAAGTaGATATGTTGCTTTACAGGCTCTAGAATTTGCCATAAGTCATTC | + |
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Preference number: 5 (lower is better) Translates to: RLKSTAMVFPLRSCK*ICCFTGSRICHKSF Trigger: GAATGACTTATGGCAAATTCTAGAGCCTGTAAAGCAACATATCCACTTGCAAGATCTTAGTGGGAAAACCATTGCCGTTGATTTGAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218259.2 ENSMUST00000219600.2 |
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| CDS-3UTR CAA 90 bp | CCAAACCAGAAAGATGGGATCCACACCATTACTATTATTACTGTGCGATTCCCAATTAATTTTGGGATTTaGCTTGGGGAAGGCTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: PNQKDGIHTITIITVRFPINFGI*LGEGFR Trigger: TCTAAAGCCTTCCCCAAGCAAAATCCCAAAATTAAT...TGGGAATCGCACAGTAATAATAGTAATGGTGTGGATCCCATCTTTCTGGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
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| CDS GCA 90 bp | AATCATAATCATGTGGTTCACAGTATTTATCACTTTTACATAATATaGATCCATTACGTTCATGATCCTTTGGCGAACCTGGGTGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: NHNHVVHSIYHFYII*IHYVHDPLANLGGN Trigger: GTTCCCACCCAGGTTCGCCAAAGGATCATGAACGTAATGGATGCATATTATGTAAAAGTGATAAATACTGTGAACCACATGATTATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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| CDS-3UTR CAA 90 bp | TTAAACAGCAGATACTCATGTACATTTTCTACCAAACATCAGTTTGCTTGGCTCAGATCCTTTGAAAAATaGGATGAGCCATCAGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: LNSRYSCTFSTKHQFAWLRSFEK*DEPSEL Trigger: TAGCTCTGATGGCTCATCCAATTTTTCAAAGGATCT...GAGCCAAGCAAACTGATGTTTGGTAGAAAATGTACATGAGTATCTGCTGTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166117.4 |
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| CDS TCA 72 bp | CAGAAGGCCCGTAACGAGTCTGAGTCCTCTTGCTTATaGCATCAGCTTTCAGCATTGGTGGCTCCCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QKARNESESSCL*HQLSALVAPLP Trigger: TGGAAGGGGAGCCACCAATGCTGAAAGCTGATGTCATAAGCAAGAGGACTCAGACTCGTTACGGGCCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 ENSMUST00000219600.2 |
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| CDS GCA 72 bp | CTGTTTCTGGTAGACAGCCACAGCATCAGGATAGGCTaGTTCAAACAGGGACGCTTCTTCCATTGTAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LFLVDSHSIRIG*FKQGRFFHCKE Trigger: CTCCTTACAATGGAAGAAGCGTCCCTGTTTGAAGCAGCCTATCCTGATGCTGTGGCTGTCTACCAGAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 |
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| CDS CAA 72 bp | TTAATGCTTGTTCCTTTCCAACTCCAGGCACTCCCTTaGGAAGGTAATCACAACCCAGAAGTACGGCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LMLVPFQLQALP*EGNHNPEVRPV Trigger: GACTGGCCGTACTTCTGGGTTGTGATTACCTTCCAAAGGGAGTGCCTGGAGTTGGAAAGGAACAAGCATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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| CDS CAA 72 bp | TTTTACATAATATGCATCCATTACGTTCATGATCCTTaGGCGAACCTGGGTGGGAACACACAGAGCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: FYIICIHYVHDP*ANLGGNTQSSE Trigger: TTCACTGCTCTGTGTGTTCCCACCCAGGTTCGCCAAAGGATCATGAACGTAATGGATGCATATTATGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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| CDS TCA 72 bp | TGTAACAGTCAACATGGGGATCCTTTGTGTTCATCGTaGAATTTCTGTAAACAGTCTGGGCTCCATAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CNSQHGDPLCSS*NFCKQSGLHKG Trigger: TCCTTTATGGAGCCCAGACTGTTTACAGAAATTTCACGATGAACACAAAGGATCCCCATGTTGACTGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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| CDS CCA 72 bp | TCAACGGCAATGGTTTTCCCACTAAGATCTTGCAAGTaGATATGTTGCTTTACAGGCTCTAGAATTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: STAMVFPLRSCK*ICCFTGSRICH Trigger: ATGGCAAATTCTAGAGCCTGTAAAGCAACATATCCACTTGCAAGATCTTAGTGGGAAAACCATTGCCGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218259.2 ENSMUST00000219600.2 |
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| CDS CAA 90 bp | ATTTATCACTTTTACATAATATGCATCCATTACGTTCATGATCCTTaGGCGAACCTGGGTGGGAACACACAGAGCAGTGAACCACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: IYHFYIICIHYVHDP*ANLGGNTQSSEPLF Trigger: AAAAAGTGGTTCACTGCTCTGTGTGTTCCCACCCAGGTTCGCCAAAGGATCATGAACGTAATGGATGCATATTATGTAAAAGTGATAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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| CDS GCA 72 bp | CTCAAATCAACGGCAATGGTTTTCCCACTAAGATCTTaGAAGTGGATATGTTGCTTTACAGGCTCTAGAATT | + |
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Preference number: 6 (lower is better) Translates to: LKSTAMVFPLRS*KWICCFTGSRI Trigger: AATTCTAGAGCCTGTAAAGCAACATATCCACTTGCAAGATCTTAGTGGGAAAACCATTGCCGTTGATTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218259.2 ENSMUST00000219600.2 |
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| CDS CAA 90 bp | GTATGTGATCGGTTTCAACATTTTATTCTTATTCAAAAGGAACTCTaGGATGACCTCATGGAATGGAAATCCTTCGCAACTGCAAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VCDRFQHFILIQKEL*DDLMEWKSFATASF Trigger: AAAGCTTGCAGTTGCGAAGGATTTCCATTCCATGAGGTCATCCAAGAGTTCCTTTTGAATAAGAATAAAATGTTGAAACCGATCACATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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| CDS GCA 72 bp | CATGTGGTTCACAGTATTTATCACTTTTACATAATATaGATCCATTACGTTCATGATCCTTTGGCGAACCTG | + |
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Preference number: 6 (lower is better) Translates to: HVVHSIYHFYII*IHYVHDPLANL Trigger: CAGGTTCGCCAAAGGATCATGAACGTAATGGATGCATATTATGTAAAAGTGATAAATACTGTGAACCACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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| CDS CCA 72 bp | CTTATTCAAAAGGAACTCTTGGATGACCTCATGGAATaGAAATCCTTCGCAACTGCAAGCTTTCTTTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LIQKELLDDLME*KSFATASFLFN Trigger: ATTAAAAAGAAAGCTTGCAGTTGCGAAGGATTTCCATTCCATGAGGTCATCCAAGAGTTCCTTTTGAATAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000166117.4 ENSMUST00000218487.2 ENSMUST00000218547.2 |
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