Pregenerated sensors for GEMIN8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040621Ensembl transcript IDs: ENSMUST00000056410.11, ENSMUST00000087169.11, ENSMUST00000096252.10, ENSMUST00000130880.9, ENSMUST00000152248.2, ENSMUST00000166440.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCCACAGAAAAAGTCACAGAAAATACGTGGACAGAAGCTCAGTGTaGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VHRKSHRKYVDRSSV*AVQTCKRAFGRWKQ Trigger: CTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACACTGAGCTTCTGTCCACGTATTTTCTGTGACTTTTTCTGTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR GCA 90 bp | GAAAAAGTCACAGAAAATACGTGGACAGAAGCTCAGTGTGGGCAGTaGAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATT | + |
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Preference number: 1 (lower is better) Translates to: EKVTENTWTEAQCGQ*KPANEHLGGGSRKI Trigger: AATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACACTGAGCTTCTGTCCACGTATTTTCTGTGACTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR CCA 90 bp | AGCTCAGTGTGGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTaGAAGCAGGAAGATTTTAAGTTTGTAGCTAGCATGCACTGTATG | + |
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Preference number: 1 (lower is better) Translates to: SSVWAVQTCKRAFGR*KQEDFKFVASMHCM Trigger: CATACAGTGCATGCTAGCTACAAACTTAAAATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACACTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR GCA 90 bp | CACAGAAAATACGTGGACAGAAGCTCAGTGTGGGCAGTGCAAACCTaGAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATTTTAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: HRKYVDRSSVWAVQT*KRAFGRWKQEDFKF Trigger: AAACTTAAAATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACACTGAGCTTCTGTCCACGTATTTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR TCA 90 bp | GTTGACAGACTGTATCCACCATGTTGGTATACAGGCCTCTTTCTCTaGAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: VDRLYPPCWYTGLFL*KMSRRDEEGEARNC Trigger: ACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTATACCAACATGGTGGATACAGTCTGTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCGTGGAGTGGGTGGGCTaGGGAGCAGGGGATAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGTYFVDQAGLELRNPPAVEWVG*GAGDRE Trigger: CTCCCTATCCCCTGCTCCCCAGCCCACCCACTCCAC...GGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCGCTCAGTGTGGGCAGTaGAAACCTGCAAACGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PGTYFVDQAGLELRNPPAAQCGQ*KPANEH Trigger: ATGCTCGTTTGCAGGTTTGCACTGCCCACACTGAGC...GGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATATACCTCTCTCCTGTTaGCAGACTGTATCCACCATG | + |
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Preference number: 2 (lower is better) Translates to: VWAVQTCKRAFGRWKQEDIPLSC*QTVSTM Trigger: CATGGTGGATACAGTCTGTCAACAGGAGAGAGGTAT...ATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTGCAAACGAGCATTTaGGAGGTGGAAGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SWNLLCRPGWPRTQKSSCLQTSI*EVEAGR Trigger: TCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAG...GCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCACAGGCCTCTTTCTCTaGAAAATGTCCAGAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: PGTYFVDQAGLELRNPPATGLFL*KMSRRD Trigger: ATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGT...GGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCTACTGTTCACTTACATaGTTTTCAGAGGGGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: SWNLLCRPGWPRTQKSSCYCSLT*FSEGST Trigger: TGTGGACCCCTCTGAAAACCATGTAAGTGAACAGTA...GCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR CCA 90 bp | AGTTATGAGACAACATGGCCTGCCAAGCCCAGAGTACTTACTCTCAGGTCTTATCGAGCATTTGGGAGGTaGAAGCAGGAAGATTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: SYETTWPAKPRVLTLRSYRAFGR*KQEDFK Trigger: CTTAAAATCTTCCTGCTTCCACCTCCCAAATGCTCG...ATAAGACCTGAGAGTAAGTACTCTGGGCTTGGCAGGCCATGTTGTCTCATAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR TCA 90 bp | AGTTATGAGACAACATGGCCTGCCAAGCCCAGAGTACTTACTCTCAGGTCTTATACAGGCCTCTTTCTCTaGAAAATGTCCAGAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SYETTWPAKPRVLTLRSYTGLFL*KMSRRD Trigger: ATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGT...ATAAGACCTGAGAGTAAGTACTCTGGGCTTGGCAGGCCATGTTGTCTCATAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR TCA 90 bp | TATCACTTTGTCAGTGAACATTCCTTGTGTTGGCAACAGTATACCTCTCTCCTGACAGGCCTCTTTCTCTaGAAAATGTCCAGAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: YHFVSEHSLCWQQYTSLLTGLFL*KMSRRD Trigger: ATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGT...CAGGAGAGAGGTATACTGTTGCCAACACAAGGAATGTTCACTGACAAAGTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTATGAGACAACATGGCCTGCCAAGCCCAGAGTACTTACTCTCAGGTCTTATGCACTGTATGAAAACTaGCCTAAAAATGTAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: SYETTWPAKPRVLTLRSYALYEN*PKNVGM Trigger: CATTCCTACATTTTTAGGCCAGTTTTCATACAGTGC...ATAAGACCTGAGAGTAAGTACTCTGGGCTTGGCAGGCCATGTTGTCTCATAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR CAA 90 bp | GAGCCAGTACAATACATAAATTATCACTTTGTCAGTGAACATTCCTaGTGTTGGCAACAGTATACCTCTCTCCTGTTGACAGACTGTATC | + |
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Preference number: 2 (lower is better) Translates to: EPVQYINYHFVSEHS*CWQQYTSLLLTDCI Trigger: GATACAGTCTGTCAACAGGAGAGAGGTATACTGTTGCCAACACAAGGAATGTTCACTGACAAAGTGATAATTTATGTATTGTACTGGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTCTaGCTCCGGAGTGCTGGGATTAAAGGCGTGCGCTAC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQKSSCL*LRSAGIKGVRY Trigger: GTAGCGCACGCCTTTAATCCCAGCACTCCGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR GCA 72 bp | TACGTGGACAGAAGCTCAGTGTGGGCAGTGCAAACCTaGAAACGAGCATTTGGGAGGTGGAAGCAGGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: YVDRSSVWAVQT*KRAFGRWKQED Trigger: ATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACACTGAGCTTCTGTCCACGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR CAA 90 bp | AGTTATGAGACAACATGGCCTGCCAAGCCCAGAGTACTTACTCTCAGGTCTTATGTGCGCTACCACACCTaGCACAGTGCCACTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SYETTWPAKPRVLTLRSYVRYHT*HSATSF Trigger: AAAAGAAGTGGCACTGTGCAAGGTGTGGTAGCGCAC...ATAAGACCTGAGAGTAAGTACTCTGGGCTTGGCAGGCCATGTTGTCTCATAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR GCA 72 bp | AAGCCCAGAGTACTTACTCTCAGGTCTTATAGAGCATaGGGGCTGACACCTAGCAGAATAACAAGTGCCACT | + |
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Preference number: 3 (lower is better) Translates to: KPRVLTLRSYRA*GLTPSRITSAT Trigger: AGTGGCACTTGTTATTCTGCTAGGTGTCAGCCCGCATGCTCTATAAGACCTGAGAGTAAGTACTCTGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR CCA 72 bp | AAAAGTCACAGAAAATACGTGGACAGAAGCTCAGTGTaGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KSHRKYVDRSSV*AVQTCKRAFGR Trigger: CCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACACTGAGCTTCTGTCCACGTATTTTCTGTGACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR-3UTR CAA 90 bp | TGTCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTTATACCTCTCTCCTGTaGACAGACTGTATCCACCAT | + |
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Preference number: 3 (lower is better) Translates to: CPGTYFVDQAGLELRNPPYTSLL*TDCIHH Trigger: ATGGTGGATACAGTCTGTCAACAGGAGAGAGGTATA...AGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR CCA 72 bp | TGGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTaGAAGCAGGAAGATTTTAAGTTTGTAGCTAGCATG | + |
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Preference number: 3 (lower is better) Translates to: WAVQTCKRAFGR*KQEDFKFVASM Trigger: CATGCTAGCTACAAACTTAAAATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR TCA 72 bp | CTGTATCCACCATGTTGGTATACAGGCCTCTTTCTCTaGAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LYPPCWYTGLFL*KMSRRDEEGEA Trigger: AGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTATACCAACATGGTGGATACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| 3UTR TCA 72 bp | ATTCCTTGTGTTGGCAACAGTATACCTCTCTCCTGTTaGCAGACTGTATCCACCATGTTGGTATACAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: IPCVGNSIPLSC*QTVSTMLVYRP Trigger: AGGCCTGTATACCAACATGGTGGATACAGTCTGTCAACAGGAGAGAGGTATACTGTTGCCAACACAAGGAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| 3UTR TCA 72 bp | CTGTTTTTATGCTATAAAGACAGGGTTAGGCAGTTATaGGACAACATGGCCTGCCAAGCCCAGAGTACTTAC | + |
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Preference number: 3 (lower is better) Translates to: LFLCYKDRVRQL*DNMACQAQSTY Trigger: GTAAGTACTCTGGGCTTGGCAGGCCATGTTGTCTCATAACTGCCTAACCCTGTCTTTATAGCATAAAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| 3UTR TCA 72 bp | AGAGCCAGTACAATACATAAATTATCACTTTGTCAGTaGACATTCCTTGTGTTGGCAACAGTATACCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: RASTIHKLSLCQ*TFLVLATVYLS Trigger: AGAGAGGTATACTGTTGCCAACACAAGGAATGTTCACTGACAAAGTGATAATTTATGTATTGTACTGGCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | CCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCCGTCATTCAGGCGCTCTaGGTCCAGCTGCTGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: PEEMKRERLGTVMHSLGSVIQAL*VQLLLS Trigger: CGACAGCAGCAGCTGGACGCAGAGCGCCTGAATGAC...GGACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | GTGTGGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATGTCATTCAGGCGCTCTaGGTCCAGCTGCTGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: VWAVQTCKRAFGRWKQEDVIQAL*VQLLLS Trigger: CGACAGCAGCAGCTGGACGCAGAGCGCCTGAATGAC...ATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| CDS-3UTR CCA 90 bp | TCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCGCTTCATCTCTGCTTaGCGCCGCTCCCAGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SWNLLCRPGWPRTQKSSCRFISA*RRSQGF Trigger: GAAGCCCTGGGAGCGGCGCCAAGCAGAGATGAAGCG...GCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| CDS-3UTR TCA 90 bp | TCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCGCCATGTGCTGGCCTTaGGAGTCCCAAGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SRRDEEGEARNCDAFPRVAMCWP*ESQGCP Trigger: TGGGCATCCTTGGGACTCTCAAGGCCAGCACATGGC...GACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | TCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCGTCATTCAGGCGCTCTaGGTCCAGCTGCTGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: SRRDEEGEARNCDAFPRVVIQAL*VQLLLS Trigger: CGACAGCAGCAGCTGGACGCAGAGCGCCTGAATGAC...GACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | TCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCCTTCTCTCCTCTCTGTaGCTCTCGGTCTGCGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: SRRDEEGEARNCDAFPRVLLSSL*LSVCAK Trigger: CTTCGCGCAGACCGAGAGGCACAGAGAGGAGAGAAG...GACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR CCA 90 bp | GAAAACTGGCCTAAAAATGTAGGAATGTCTGGGCCAGGATGTGGAGTGGGTGGGGCTGCCCAGGGCTTTTaGGATGGGAAACACGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ENWPKNVGMSGPGCGVGGAAQGF*DGKHGR Trigger: CCTACCGTGTTTCCCATCCCAAAAGCCCTGGGCAGC...CCCACCCACTCCACATCCTGGCCCAGACATTCCTACATTTTTAGGCCAGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| CDS-3UTR CCA 90 bp | CCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCCGTACAGCAGTCTCCATaGCCAGGATCTTGGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PEEMKRERLGTVMHSLGSVQQSP*PGSWEH Trigger: GTGCTCCCAAGATCCTGGCCATGGAGACTGCTGTAC...GGACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR TCA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGCCATGTGCTGGCCTTaGGAGTCCCAAGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ASFSEKCPEEMKRERLGTAMCWP*ESQGCP Trigger: TGGGCATCCTTGGGACTCTCAAGGCCAGCACATGGC...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTCTTCTCTCCTCTCTGTaGCTCTCGGTCTGCGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: ASFSEKCPEEMKRERLGTLLSSL*LSVCAK Trigger: CTTCGCGCAGACCGAGAGGCACAGAGAGGAGAGAAG...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGTCATTCAGGCGCTCTaGGTCCAGCTGCTGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: IQASFSEKCPEEMKRERLVIQAL*VQLLLS Trigger: CGACAGCAGCAGCTGGACGCAGAGCGCCTGAATGAC...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR CCA 90 bp | GGTATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGGCTGCCCAGGGCTTTTaGGATGGGAAACACGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GIQASFSEKCPEEMKRERAAQGF*DGKHGR Trigger: CCTACCGTGTTTCCCATCCCAAAAGCCCTGGGCAGC...CCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR CCA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGCTGCCCAGGGCTTTTaGGATGGGAAACACGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ASFSEKCPEEMKRERLGTAAQGF*DGKHGR Trigger: CCTACCGTGTTTCCCATCCCAAAAGCCCTGGGCAGC...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTCTATTACGCAGAGGCTaGCCAGGGCTTTTGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: ASFSEKCPEEMKRERLGTLLRRG*PGLLGW Trigger: CCATCCCAAAAGCCCTGGGCAGCCTCTGCGTAATAG...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | CCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCCATTCCCTCTTGTGGATaGCTGGGTTCTACTGCTATT | + |
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Preference number: 4 (lower is better) Translates to: PEEMKRERLGTVMHSLGSIPSCG*LGSTAI Trigger: AATAGCAGTAGAACCCAGGCATCCACAAGAGGGAAT...GGACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS-3UTR GCA 90 bp | GTGTGGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATATTCCCTCTTGTGGATaGCTGGGTTCTACTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: VWAVQTCKRAFGRWKQEDIPSCG*LGSTAI Trigger: AATAGCAGTAGAACCCAGGCATCCACAAGAGGGAAT...ATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR GCA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTACTTCTCTCCTCTCTGTaGCTCTCGGTCTGCGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQASFSEKCPEEMKRERLLLSSL*LSVCAK Trigger: CTTCGCGCAGACCGAGAGGCACAGAGAGGAGAGAAG...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGCTGCCCAGGGCTTTTaGGATGGGAAACACGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQASFSEKCPEEMKRERLAAQGF*DGKHGR Trigger: CCTACCGTGTTTCCCATCCCAAAAGCCCTGGGCAGC...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CCA 90 bp | GGTATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGGTACAGCAGTCTCCATaGCCAGGATCTTGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIQASFSEKCPEEMKRERVQQSP*PGSWEH Trigger: GTGCTCCCAAGATCCTGGCCATGGAGACTGCTGTAC...CCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTACAGCAGTCTCCATaGCCAGGATCTTGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSEKCPEEMKRERLGTVQQSP*PGSWEH Trigger: GTGCTCCCAAGATCCTGGCCATGGAGACTGCTGTAC...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCGACAGGCCAGTACTTTaGTTGCTTTCTGTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWNLLCRPGWPRTQKSSCDRPVL*LLSVTV Trigger: CACTGTGACAGAAAGCAACCAAAGTACTGGCCTGTC...GCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR TCA 90 bp | CCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCCCTTGCATATACTGGGTaGGAATACCAAGATGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: PEEMKRERLGTVMHSLGSLAYTG*EYQDAL Trigger: TAGTGCATCTTGGTATTCTCACCCAGTATATGCAAG...GGACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000130880.9 |
||
| CDS-3UTR GCA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTACTATTACGCAGAGGCTaGCCAGGGCTTTTGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: IQASFSEKCPEEMKRERLLLRRG*PGLLGW Trigger: CCATCCCAAAAGCCCTGGGCAGCCTCTGCGTAATAG...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCTCTTGGGAGCACTGTTaGCATATAAGCGCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SWNLLCRPGWPRTQKSSCSWEHC*HISASS Trigger: AGATGAAGCGCTTATATGGCAACAGTGCTCCCAAGA...GCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATTTTCTTGGGAGCACTGTTaGCATATAAGCGCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VGSANLQTSIWEVEAGRFSWEHC*HISASS Trigger: AGATGAAGCGCTTATATGGCAACAGTGCTCCCAAGA...AAATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR TCA 90 bp | GAAAACTGGCCTAAAAATGTAGGAATGTCTGGGCCAGGATGTGGAGTGGGTGGGCTTGCATATACTGGGTaGGAATACCAAGATGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: ENWPKNVGMSGPGCGVGGLAYTG*EYQDAL Trigger: TAGTGCATCTTGGTATTCTCACCCAGTATATGCAAG...CCCACCCACTCCACATCCTGGCCCAGACATTCCTACATTTTTAGGCCAGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATTTTAAGAGAACTTCAGGGGAATaGCAGGCCAGTACTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVQTCKRAFGRWKQEDFKRTSGE*QASTLV Trigger: AACCAAAGTACTGGCCTGTCATTCCCCTGAAGTTCT...CTTAAAATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR GCA 90 bp | TATCACTTTGTCAGTGAACATTCCTTGTGTTGGCAACAGTATACCTCTCTCCTGCTATTACGCAGAGGCTaGCCAGGGCTTTTGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YHFVSEHSLCWQQYTSLLLLRRG*PGLLGW Trigger: CCATCCCAAAAGCCCTGGGCAGCCTCTGCGTAATAG...CAGGAGAGAGGTATACTGTTGCCAACACAAGGAATGTTCACTGACAAAGTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTCTTGCATATACTGGGTaGGAATACCAAGATGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: CPGTYFVDQAGLELRNPPLAYTG*EYQDAL Trigger: TAGTGCATCTTGGTATTCTCACCCAGTATATGCAAG...AGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR TCA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTAGAACTTCAGGGGAATaGCAGGCCAGTACTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASFSEKCPEEMKRERLGTRTSGE*QASTLV Trigger: AACCAAAGTACTGGCCTGTCATTCCCCTGAAGTTCT...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR TCA 90 bp | GGTATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGAGAACTTCAGGGGAATaGCAGGCCAGTACTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GIQASFSEKCPEEMKRERRTSGE*QASTLV Trigger: AACCAAAGTACTGGCCTGTCATTCCCCTGAAGTTCT...CCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CCA 90 bp | AGTTATGAGACAACATGGCCTGCCAAGCCCAGAGTACTTACTCTCAGGTCTTATGACAGGCCAGTACTTTaGTTGCTTTCTGTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SYETTWPAKPRVLTLRSYDRPVL*LLSVTV Trigger: CACTGTGACAGAAAGCAACCAAAGTACTGGCCTGTC...ATAAGACCTGAGAGTAAGTACTCTGGGCTTGGCAGGCCATGTTGTCTCATAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGACAGGCCAGTACTTTaGTTGCTTTCTGTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASFSEKCPEEMKRERLGTDRPVL*LLSVTV Trigger: CACTGTGACAGAAAGCAACCAAAGTACTGGCCTGTC...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| 3UTR CAA 72 bp | CATTCCTTGTGTTGGCAACAGTATACCTCTCTCCTGTaGACAGACTGTATCCACCATGTTGGTATACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLCWQQYTSLL*TDCIHHVGIQA Trigger: GGCCTGTATACCAACATGGTGGATACAGTCTGTCAACAGGAGAGAGGTATACTGTTGCCAACACAAGGAATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR TCA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAAGAACTTCAGGGGAATaGCAGGCCAGTACTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IQASFSEKCPEEMKRERLRTSGE*QASTLV Trigger: AACCAAAGTACTGGCCTGTCATTCCCCTGAAGTTCT...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGACAGGCCAGTACTTTaGTTGCTTTCTGTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQASFSEKCPEEMKRERLDRPVL*LLSVTV Trigger: CACTGTGACAGAAAGCAACCAAAGTACTGGCCTGTC...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR GCA 90 bp | TATCACTTTGTCAGTGAACATTCCTTGTGTTGGCAACAGTATACCTCTCTCCTGTCTTGGGAGCACTGTTaGCATATAAGCGCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YHFVSEHSLCWQQYTSLLSWEHC*HISASS Trigger: AGATGAAGCGCTTATATGGCAACAGTGCTCCCAAGA...CAGGAGAGAGGTATACTGTTGCCAACACAAGGAATGTTCACTGACAAAGTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| 3UTR CAA 72 bp | CAATACATAAATTATCACTTTGTCAGTGAACATTCCTaGTGTTGGCAACAGTATACCTCTCTCCTGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QYINYHFVSEHS*CWQQYTSLLLT Trigger: TGTCAACAGGAGAGAGGTATACTGTTGCCAACACAAGGAATGTTCACTGACAAAGTGATAATTTATGTATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
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| CDS CCA 90 bp | ATGCCTGGGTTCTACTGCTATTACGCAGAGGCTGCCCAGGGCTTTTaGGATGGGAAACACGGTAGGGAGACTCCTGCTGCGCCATGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MPGFYCYYAEAAQGF*DGKHGRETPAAPCA Trigger: AGCACATGGCGCAGCAGGAGTCTCCCTACCGTGTTTCCCATCCCAAAAGCCCTGGGCAGCCTCTGCGTAATAGCAGTAGAACCCAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 ENSMUST00000152248.2 ENSMUST00000166440.2 |
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| CDS CCA 90 bp | CTGACTCCAGCTCTTCCTCCTCACACCGTGCTTCATTCCCTCTTGTaGATGCCTGGGTTCTACTGCTATTACGCAGAGGCTGCCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTPALPPHTVLHSLL*MPGFYCYYAEAAQG Trigger: GCCCTGGGCAGCCTCTGCGTAATAGCAGTAGAACCCAGGCATCCACAAGAGGGAATGAAGCACGGTGTGAGGAGGAAGAGCTGGAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 ENSMUST00000152248.2 ENSMUST00000166440.2 |
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| CDS GCA 90 bp | CTCCAGCTCTTCCTCCTCACACCGTGCTTCATTCCCTCTTGTGGATaGCTGGGTTCTACTGCTATTACGCAGAGGCTGCCCAGGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQLFLLTPCFIPSCG*LGSTAITQRLPRAF Trigger: AAAAGCCCTGGGCAGCCTCTGCGTAATAGCAGTAGAACCCAGGCATCCACAAGAGGGAATGAAGCACGGTGTGAGGAGGAAGAGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 ENSMUST00000152248.2 ENSMUST00000166440.2 |
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| CDS-3UTR CAA 90 bp | AGTTATGAGACAACATGGCCTGCCAAGCCCAGAGTACTTACTCTCAGGTCTTATGCGCTTCATCTCTGCTaGGCGCCGCTCCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SYETTWPAKPRVLTLRSYALHLC*APLPGL Trigger: AAGCCCTGGGAGCGGCGCCAAGCAGAGATGAAGCGC...ATAAGACCTGAGAGTAAGTACTCTGGGCTTGGCAGGCCATGTTGTCTCATAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
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| CDS-3UTR CAA 90 bp | TCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCGTGCTTCATTCCCTCTaGTGGATGCCTGGGTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRRDEEGEARNCDAFPRVVLHSL*WMPGFY Trigger: GTAGAACCCAGGCATCCACAAGAGGGAATGAAGCAC...GACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGCAGTGCAAACCTGCAAACGAGCATTTGGGAGGTGGAAGCAGGAAGATTTTCCATGGCCAGGATCTaGGGAGCACTGTTGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: VGSANLQTSIWEVEAGRFSMARI*GALLPY Trigger: ATATGGCAACAGTGCTCCCAAGATCCTGGCCATGGA...AAATCTTCCTGCTTCCACCTCCCAAATGCTCGTTTGCAGGTTTGCACTGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCCATCTTGGGAGCACTGTaGCCATATAAGCGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PEEMKRERLGTVMHSLGSILGAL*PYKRFI Trigger: GATGAAGCGCTTATATGGCAACAGTGCTCCCAAGAT...GGACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTTCCATGGCCAGGATCTaGGGAGCACTGTTGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: CPGTYFVDQAGLELRNPPSMARI*GALLPY Trigger: ATATGGCAACAGTGCTCCCAAGATCCTGGCCATGGA...AGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGATGCATTCCCTAGGGTCATCTTGGGAGCACTGTaGCCATATAAGCGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRRDEEGEARNCDAFPRVILGAL*PYKRFI Trigger: GATGAAGCGCTTATATGGCAACAGTGCTCCCAAGAT...GACCCTAGGGAATGCATCACAGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTGTGCTTCATTCCCTCTaGTGGATGCCTGGGTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ASFSEKCPEEMKRERLGTVLHSL*WMPGFY Trigger: GTAGAACCCAGGCATCCACAAGAGGGAATGAAGCAC...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | GGTATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGGTGCTTCATTCCCTCTaGTGGATGCCTGGGTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: GIQASFSEKCPEEMKRERVLHSL*WMPGFY Trigger: GTAGAACCCAGGCATCCACAAGAGGGAATGAAGCAC...CCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGGAACTTCCATGGCCAGGATCTaGGGAGCACTGTTGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: ASFSEKCPEEMKRERLGTSMARI*GALLPY Trigger: ATATGGCAACAGTGCTCCCAAGATCCTGGCCATGGA...AGTTCCTAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAGTGCTTCATTCCCTCTaGTGGATGCCTGGGTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: IQASFSEKCPEEMKRERLVLHSL*WMPGFY Trigger: GTAGAACCCAGGCATCCACAAGAGGGAATGAAGCAC...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTATCCATGGCCAGGATCTaGGGAGCACTGTTGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: IQASFSEKCPEEMKRERLSMARI*GALLPY Trigger: ATATGGCAACAGTGCTCCCAAGATCCTGGCCATGGA...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS-3UTR CAA 90 bp | ATACAGGCCTCTTTCTCTGAAAAATGTCCAGAAGAGATGAAGAGGGAGAGGCTAATCTTGGGAGCACTGTaGCCATATAAGCGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IQASFSEKCPEEMKRERLILGAL*PYKRFI Trigger: GATGAAGCGCTTATATGGCAACAGTGCTCCCAAGAT...TAGCCTCTCCCTCTTCATCTCTTCTGGACATTTTTCAGAGAAAGAGGCCTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 |
||
| CDS CAA 72 bp | ACGGTAGGGAGACTCCTGCTGCGCCATGTGCTGGCCTaGAGAGTCCCAAGGATGCCCAGCCTCATAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVGRLLLRHVLA*RVPRMPSLISR Trigger: CCTGCTTATGAGGCTGGGCATCCTTGGGACTCTCAAGGCCAGCACATGGCGCAGCAGGAGTCTCCCTACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 ENSMUST00000152248.2 ENSMUST00000166440.2 |
||
| CDS CCA 72 bp | TTCTACTGCTATTACGCAGAGGCTGCCCAGGGCTTTTaGGATGGGAAACACGGTAGGGAGACTCCTGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: FYCYYAEAAQGF*DGKHGRETPAA Trigger: CGCAGCAGGAGTCTCCCTACCGTGTTTCCCATCCCAAAAGCCCTGGGCAGCCTCTGCGTAATAGCAGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 ENSMUST00000152248.2 ENSMUST00000166440.2 |
||
| CDS GCA 72 bp | TTCCTCCTCACACCGTGCTTCATTCCCTCTTGTGGATaGCTGGGTTCTACTGCTATTACGCAGAGGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLLTPCFIPSCG*LGSTAITQRLP Trigger: GGGCAGCCTCTGCGTAATAGCAGTAGAACCCAGGCATCCACAAGAGGGAATGAAGCACGGTGTGAGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 ENSMUST00000152248.2 ENSMUST00000166440.2 |
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| CDS CAA 72 bp | GCGAAGTACTGCCGGAGCTCCTCGGTGATCTCCATATaGCTCAGGTCGCACTCTACTTCATCATCTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: AKYCRSSSVISI*LRSHSTSSSES Trigger: AGATTCAGATGATGAAGTAGAGTGCGACCTGAGCAATATGGAGATCACCGAGGAGCTCCGGCAGTACTTCGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056410.11 ENSMUST00000087169.11 ENSMUST00000096252.10 ENSMUST00000130880.9 ENSMUST00000152248.2 ENSMUST00000166440.2 |
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