Pregenerated sensors for GEMIN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049396Ensembl transcript IDs: ENSMUST00000102500.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGCTTAGCTCTGGGCCCTaGAGAAACACCACGGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: YLRKLFLYTALVLLSLCTLSSGP*RNTTVD Trigger: GTCCACCGTGGTGTTTCTGCAGGGCCCAGAGCTAAG...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCCCGACTGCATCAACCTaGCTGCATCCAGGACACTGG | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCPTAST*LHPGHW Trigger: CCAGTGTCCTGGATGCAGTCAGGTTGATGCAGTCGG...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCGCCATCGTCCTGAACTaGGAAAGCAAGGGGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCAIVLN*ESKGSC Trigger: GCAGGACCCCTTGCTTTCCCAGTTCAGGACGATGGC...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCGATACTGCTGGAGACTaGACAGCACTCCATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCDTAGD*TALHPG Trigger: GCCTGGATGGAGTGCTGTTCAGTCTCCAGCAGTATC...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCTTCCTGGTCAGCTGCTaGAGGTACTGCCATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCFLVSC*RYCHSW Trigger: CCAGGAATGGCAGTACCTTCAGCAGCTGACCAGGAA...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTCAAGGCCTCCACAATaGGCTGTCCCACGTGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPSRPPQ*AVPRVP Trigger: GGGAACACGTGGGACAGCCCATTGTGGAGGCCTTGA...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGGCAATGGAGGCAGTaGTGTCCTCAAGGCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPWQWRQ*CPQGPC Trigger: ACAAGGGCCTTGAGGACATCACTGCCTCCATTGCCA...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCGGCAACCCACTCGTCTaGAAAGGCCCACTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPGNPLV*KGPLLL Trigger: GAGAAGAAGTGGGCCTTTTCAGACGAGTGGGTTGCC...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCACTGTACCAGGGCTTTaGGGTGGAACAGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPTVPGL*GGTAAQ Trigger: CTGAGCAGCTGTTCCACCCCAAAGCCCTGGTACAGT...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTCCCCTTCTTGTCCTTaGGCCCAGGGACCCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLSPSCP*AQGPTD Trigger: GTCGGTGGGTCCCTGGGCCCAAGGACAAGAAGGGGA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTTCCCTGACTGCTGTTaGGCATGTCCTGCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPFPDCC*ACPAVL Trigger: CAGAACTGCAGGACATGCTCAACAGCAGTCAGGGAA...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCATCAGACAACCTGTCTaGGAGACCCTTTGGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPIRQPV*ETLWPQ Trigger: TTGGGGCCAAAGGGTCTCTCAGACAGGTTGTCTGAT...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTCTGGAGCAAGGAGCTaGCAGAAGGGTTGCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPSGARS*QKGCFC Trigger: GCAAAAGCAACCCTTCTGTCAGCTCCTTGCTCCAGA...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCCGATGGTATGGGTTCTaGGTGTCCGAGTTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPRWYGF*VSEFHT Trigger: TGTGTGGAACTCGGACACCCAGAACCCATACCATCG...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGCCAGGACAGGGACTTaGCCCAGGTGTCTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSARTGT*PRCLGR Trigger: TCTCCCCAGACACCTGGGCCAAGTCCCTGTCCTGGC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTCAGTGTCAGAAGGGCTaGCAGGGGAGGGCTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLQCQKG*QGRAEE Trigger: TTCTTCAGCCCTCCCCTGTCAGCCCTTCTGACACTG...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCAAGGCAGTGAGAATCTaGGCCAAGAACCTATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCKAVRI*AKNLCV Trigger: CACACATAGGTTCTTGGCTCAGATTCTCACTGCCTT...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCGAAAGAACAGAGAGCTaGAGTTCCTGGGCAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPERTES*SSWAKG Trigger: GCCTTTTGCCCAGGAACTTCAGCTCTCTGTTCTTTC...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCTACAACAGCTCTGGCTaGAGAGAAACTGGAACACTC | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCYNSSG*RETGTL Trigger: GAGTGTTCCAGTTTCTCTGCAGCCAGAGCTGTTGTA...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCGACTTTAAGAAGCGCTaGTCGTCTACCTTCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPDFKKR*SSTFWS Trigger: GCTCCAGAAGGTAGACGAGCAGCGCTTCTTAAAGTC...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGTTCAGGATCACCAGGTaGGCCACGGAGGCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTFRITR*ATEATA Trigger: AGCTGTGGCCTCCGTGGCCCACCTGGTGATCCTGAA...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCAGAAGGGAAAGCATCTaGTCAGAGATACTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCRRESI*SEILLE Trigger: CTCCAGCAGTATCTCTGACCAGATGCTTTCCCTTCT...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCTCTCCAATAGCTTCCTaGTCAGCTGCTGAAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCSPIAS*SAAEGT Trigger: AGTACCTTCAGCAGCTGACCAGGAAGCTATTGGAGA...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCTCGTCTACCTTCTaGAGCAAGGAGCTGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPCSSTF*SKELTE Trigger: TTCTGTCAGCTCCTTGCTCCAGAAGGTAGACGAGCA...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTGCTCCAAGTTCTGGCTaGAGGAAGTCAGGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLAPSSG*RKSGCH Trigger: GTGACAGCCTGACTTCCTTCAGCCAGAACTTGGAGC...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTACACTCAGCCAATTCTaGGACCACCTCCCTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLTLSQF*DHLPLL Trigger: GAGGAGAGGGAGGTGGTCTCAGAATTGGCTGAGTGT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGGGCTACACCAAGGCATaGCTTGTACCAGGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTGYTKA*LVPGPP Trigger: TGGTGGCCCTGGTACAAGTCATGCCTTGGTGTAGCC...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTCTGGTCAGAGATACTaGTGGAGACTGAACAGCACT | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPSGQRY*WRLNST Trigger: AGTGCTGTTCAGTCTCCAGCAGTATCTCTGACCAGA...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTAGCAAGGGGTCCTGCTaGTCGCCCTTGTGCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSSKGSC*SPLCFI Trigger: GATGAAGCACAAGGGCGACCAGCAGGACCCCTTGCT...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGTGTCTAGGTACACGGTaGCCGACACCTCCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTCLGTR*PTPPGC Trigger: ACACCCAGGAGGTGTCGGCCACCGTGTACCTAGACA...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTCTTGAGCACCTCATCTaGCTCCAGAAGAGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLLEHLI*LQKSSH Trigger: GTGGCTGCTCTTCTGGAGCCAGATGAGGTGCTCAAG...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTACCTGTGAGGTCCACTaGGCCTCAGAGAGCTTACAG | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLTCEVH*ASESLQ Trigger: CTGTAAGCTCTCTGAGGCCCAGTGGACCTCACAGGT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGGTACTGCCATTCCTaGGGGCTACACCAAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLRYCHS*GLHQGM Trigger: CATGCCTTGGTGTAGCCCCCAGGAATGGCAGTACCT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGTTTGGCCAGTGAGGTaGGACTCACATCTCGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSVWPVR*DSHLAL Trigger: CAGAGCGAGATGTGAGTCTCACCTCACTGGCCAAAC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR TCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGGGTTCACAGACCTCCTaGGGGAGCATGGCCATGATA | + |
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Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTGSQTS*GSMAMI Trigger: TATCATGGCCATGCTCCCTCAGGAGGTCTGTGAACC...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGTTGGGGTGGAACAGCTaGTCAGCCATCAAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTLGWNS*SAIKKP Trigger: GGGCTTCTTGATGGCTGAGCAGCTGTTCCACCCCAA...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCCCAGATGATGATCAGTaGTTTCTTCTTCCAGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PFTVYVLITLFVLSSGPCPDDDQ*FLLPGK Trigger: TTTGCCTGGAAGAAGAAAGCACTGATCATCATCTGG...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTGCTGGTCGCCCTTGTaGTTCATCATTTCCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLCWSPL*FIISHQ Trigger: CTGGTGGGAAATGATGAAGCACAAGGGCGACCAGCA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTCTGTTGAGCATGTCCTaGAGTTCTGCACCCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLLLSMS*SSAPHS Trigger: AGAGTGGGGTGCAGAACTGCAGGACATGCTCAACAG...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCACTGGTACATGGATTTaGCCCTTGTTCTTCCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPTGTWI*PLFFRE Trigger: TTCACGGAAGAACAAGGGGCAAATCCATGTACCAGT...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR GCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTCTAGCTGGTCTAATTTaGGGTGGAGCCAGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSLAGLI*GGARTG Trigger: CCCTGTCCTGGCTCCACCGCAAATTAGACCAGCTAG...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGTGGCCAAAAGAGGCATaGTGGGACCCACATCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTWPKEA*WDPHLG Trigger: ACCCAGATGTGGGTCCCACCATGCCTCTTTTGGCCA...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGGGCCTGTCGATGGTATaGGTTCTGGGTGTCCGAGTT | + |
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Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTGLSMV*VLGVRV Trigger: AACTCGGACACCCAGAACCCATACCATCGACAGGCC...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGCAGAAGAGCAGCCACTaGAATCCCCTGTGGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTQKSSH*NPLWLH Trigger: GTGAAGCCACAGGGGATTCCAGTGGCTGCTCTTCTG...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTAAGCTGTCCAGGAGCTaGCACAGGCTGAAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSKLSRS*HRLKSR Trigger: TCTGCTCTTCAGCCTGTGCCAGCTCCTGGACAGCTT...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTGGTCTAATTTGCGGTaGAGCCAGGACAGGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLWSNLR*SQDRDL Trigger: CAAGTCCCTGTCCTGGCTCCACCGCAAATTAGACCA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR GCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTCTGCACCCCACTCTTaGAGCAGGTTGTACATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLSAPHS*SRLYIS Trigger: GCTTATGTACAACCTGCTGCAAGAGTGGGGTGCAGA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGCTGGGAATGTGCTGTaGCTGAGGAGATCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSAGNVL*LRRSPS Trigger: TGAAGGAGATCTCCTCAGCCACAGCACATTCCCAGC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCAACCTCTTTGGAGGATaGGAAAACTCATCTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPFTVYVLITLFVLSSGPNLFGG*ENSSED Trigger: ATCCTCAGATGAGTTTTCCCATCCTCCAAAGAGGTT...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTCACTGGAATCCCCTGTaGCTTCACAGGATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSHWNPL*LHRIRQ Trigger: CTGACGAATCCTGTGAAGCCACAGGGGATTCCAGTG...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGCTTGGCCCAGGTGTCTaGGGAGAAGGTTTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTLGPGV*GEGFCV Trigger: AACACAGAAACCTTCTCCCCAGACACCTGGGCCAAG...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR TCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTCCATTAGCAGCTGAATaGAGAGTCCAGAAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLPLAAE*RVQKLP Trigger: TGGAAGCTTCTGGACTCTTCATTCAGCTGCTAATGG...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR TCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAAGGCCATTAGCAGCTaGATGAAGAGTCCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLKAISS*MKSPEA Trigger: AGCTTCTGGACTCTTCATTCAGCTGCTAATGGCCTT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR TCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGAGGGAGCATGGCCATaGTATGCAGAACATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSEGAWP*YAEHDR Trigger: TCTGTCATGTTCTGCATATCATGGCCATGCTCCCTC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR GCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTACTCACATCTCGCTCTaGCTCCTTTACCTTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSTHISL*LLYLVC Trigger: GCAGACAAGGTAAAGGAGGCAGAGCGAGATGTGAGT...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR GCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTTCAGAGGTACTCTGTaGGAGCTGGTTAAACGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLFRGTL*ELVKRR Trigger: ACGACGTTTAACCAGCTCGCACAGAGTACCTCTGAA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTCATTCAGCATTCTGCTaGTTTTCCTCAGGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLHSAFC*FSSGSP Trigger: GGGACTTCCTGAGGAAAACCAGCAGAATGCTGAATG...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTACTGCTTCTCTTCTTTaGGTGTGGAGAACTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLTASLL*VWRTWS Trigger: GGACCAAGTTCTCCACACCCAAAGAAGAGAAGCAGT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTACAGTCCAATCTAGCTaGTCTAATTTGCGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLTVQSS*SNLRWS Trigger: GCTCCACCGCAAATTAGACCAGCTAGATTGGACTGT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTAGGAGTTTGACCACATaGCTCCAACCGTCCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSRSLTT*LQPSKG Trigger: TCCTTTGGACGGTTGGAGCCATGTGGTCAAACTCCT...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR TCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGAAGCTTCCAGAGACTTaGGCAGCTCAAAAAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTKLPET*AAQKGL Trigger: CAGTCCTTTTTGAGCTGCTCAAGTCTCTGGAAGCTT...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR TCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTCAAAAGGCTTCAGGTTaGGCAGGGGAACAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSQKASG*AGEQTE Trigger: TTCAGTTTGTTCCCCTGCTCAACCTGAAGCCTTTTG...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR GCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGTCATCCTCCAGAAGTaGAAACACACTCAGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSVILQK*KHTQHV Trigger: GACATGCTGAGTGTGTTTGCACTTCTGGAGGATGAC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR GCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGCAGAAGGGTTGCTTTTaGTTAGAGTCTCGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTQKGCF*LESRSR Trigger: CCTGCTACGAGACTCTAAGCAAAAGCAACCCTTCTG...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGATGGCAAGTATTTATaGGCCATCGTCCTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSDGKYL*AIVLNW Trigger: CCAGTTCAGGACGATGGCCCATAAATACTTGCCATC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGCAGTTACAACAGCTCTaGCTGCAGAGAAACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTQLQQL*LQRNWN Trigger: GTTCCAGTTTCTCTGCAGCCAGAGCTGTTGTAACTG...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR GCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTGTCATTCAGCATTCTaGTGGTTTTCCTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLCHSAF*WFSSGS Trigger: ACTTCCTGAGGAAAACCAGCAGAATGCTGAATGACA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTAGAAGGCCACATCCTTaGAAGATGTGTCAACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSRRPHP*KMCQQS Trigger: TGACTGTTGACACATCTTCCAAGGATGTGGCCTTCT...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGTATGTGTGCCAAGATTaGTCACAGCTAGGCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTYVCQD*SQLGYT Trigger: TGTGTAGCCTAGCTGTGACCAATCTTGGCACACATA...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTATCAAAAAGGGTAGCTaGCACCTCACACTTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSIKKGS*HLTLEV Trigger: CACTTCAAGTGTGAGGTGCCAGCTACCCTTTTTGAT...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTGGCTGCAGAGAAACTaGAACACTCTCAAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLWLQRN*NTLKER Trigger: TCTTTCTTTGAGAGTGTTCCAGTTTCTCTGCAGCCA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR TCA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTATGGGAAAACTCATCTaGGGATGGCAAGTATTTATG | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTPFTVYVLITLFVLMGKLI*GWQVFM Trigger: CATAAATACTTGCCATCCTCAGATGAGTTTTCCCAT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTCATGAAACTGGTACATaGATTTGCCCCTTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCTPFTVYVLITLFVLSSHETGT*ICPLFF Trigger: GAAGAACAAGGGGCAAATCCATGTACCAGTTTCATG...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CCA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGACCTCACACTTGAAGTaGCCTTCAAAGAAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLRKLFLYTALVLLSLCTTSHLK*PSKKFF Trigger: AAAGAACTTCTTTGAAGGCCACTTCAAGTGTGAGGT...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS GCA 90 bp | AGGGCTTTGGGGTGGAACAGCTGCTCAGCCATCAAGAAGCCCCCATaGAGAATAGTCATCTCCTCACAGATATTCAAGGGTCCTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RALGWNSCSAIKKPP*RIVISSQIFKGPRS Trigger: GGACCTAGGACCCTTGAATATCTGTGAGGAGATGACTATTCTGCATGGGGGCTTCTTGATGGCTGAGCAGCTGTTCCACCCCAAAGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCAGCCAGGACAGGGACTaGGCCCAGGTGTCTGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TPFTVYVLITLFVLSSGPSQDRD*AQVSGE Trigger: CTCCCCAGACACCTGGGCCAAGTCCCTGTCCTGGCT...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCATCCCCTTCTTGTCCTaGGGCCCAGGGACCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: PFTVYVLITLFVLSSGPCIPFLS*GPGTHR Trigger: TCGGTGGGTCCCTGGGCCCAAGGACAAGAAGGGGAT...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCTCTGCCTCCTTTACCTaGTCTGCCAGGGCCTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PFTVYVLITLFVLSSGPCSASFT*SARACR Trigger: TCGACAGGCCCTGGCAGACAAGGTAAAGGAGGCAGA...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCAACTGTACCAGGGCTTaGGGGTGGAACAGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PFTVYVLITLFVLSSGPCNCTRA*GWNSCS Trigger: TGAGCAGCTGTTCCACCCCAAAGCCCTGGTACAGTT...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCCTGAAGAGAGACCTGTaGTTAACCAGGCAGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TPFTVYVLITLFVLSSGPLKRDL*LTRQAT Trigger: GGTTGCCTGCCTGGTTAACAACAGGTCTCTCTTCAG...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCGAGCTGACAGAAGGGTaGCTTTTGCTTAGAGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PFTVYVLITLFVLSSGPCELTEG*LLLRVS Trigger: CGAGACTCTAAGCAAAAGCAACCCTTCTGTCAGCTC...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGGTCTCGCTGGGGAGTTaGGCCAGTGAGGTGAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: YLRKLFLYTALVLLSLCTVSLGS*ASEVRL Trigger: GAGTCTCACCTCACTGGCCAAACTCCCCAGCGAGAC...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCCTATGTGTGCCAAGATaGGTCACAGCTAGGCTACAC | + |
|
Preference number: 5 (lower is better) Translates to: TPFTVYVLITLFVLSSGPLCVPR*VTARLH Trigger: GTGTAGCCTAGCTGTGACCAATCTTGGCACACATAG...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTCTTCCAGGCCTGCATaGGCTTCGAGGGTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HCSCTPFTVYVLITLFVLSSRPA*ASRVWM Trigger: CATCCAGACCCTCGAAGCCAATGCAGGCCTGGAAGA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGAGCTGCCAGAACTaGCTGAAGCTGTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCTPFTVYVLITLFVLSSGSCQN*LKLSRS Trigger: GCTCCTGGACAGCTTCAGCAAGTTCTGGCAGCTCCC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCTGCAAAAGGACTGTGTGGTaGATGGTAGGGATCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFTVYVLITLFVLSSGPCKRTVW*MVGIML Trigger: CAACATGATCCCTACCATCAACCACACAGTCCTTTT...GCAGGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGGGCCCACATGGATTTGCCCCTaGTTCTTCCGTGAACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPFTVYVLITLFVLSSGPTWICP*FFRELQ Trigger: CTGAAGTTCACGGAAGAACAAGGGGCAAATCCATGT...GGGCCCAGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGGGCAGGACAAACTCCTaGAGCACCTCATCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLRKLFLYTALVLLSLCTGRTNS*STSSGS Trigger: GGAGCCAGATGAGGTGCTCAAGGAGTTTGTCCTGCC...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTTCTAGCTGGTCTAATTaGCGGTGGAGCCAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HCSCTPFTVYVLITLFVLSSWSN*RWSQDR Trigger: CCTGTCCTGGCTCCACCGCAAATTAGACCAGCTAGA...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
||
| CDS-3UTR CAA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTCTGACCTCCTCAGGATaGCCCACATCCATCACCAGA | + |
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Preference number: 5 (lower is better) Translates to: HCSCTPFTVYVLITLFVLLTSSG*PTSITR Trigger: TCTGGTGATGGATGTGGGCAATCCTGAGGAGGTCAG...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTGCCACCAGAAAGCCCTaGCTAAACAGTCTGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: HCSCTPFTVYVLITLFVLATRKP*LNSLTS Trigger: GGAGGTCAGACTGTTTAGCAAGGGCTTTCTGGTGGC...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTTCCTGCTGGTCGCCCTaGTGCTTCATCATTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SCTPFTVYVLITLFVLSSSCWSP*CFIISH Trigger: GTGGGAAATGATGAAGCACAAGGGCGACCAGCAGGA...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGCTGTTACAGAGGAGTTaGACCACATGGCTCCAACCG | + |
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Preference number: 5 (lower is better) Translates to: YLRKLFLYTALVLLSLCTLLQRS*TTWLQP Trigger: CGGTTGGAGCCATGTGGTCAAACTCCTCTGTAACAG...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTATGGTAGGGATCATGTaGCCCACGGAGAAGAATACA | + |
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Preference number: 5 (lower is better) Translates to: HCSCTPFTVYVLITLFVLMVGIM*PTEKNT Trigger: TGTATTCTTCTCCGTGGGCAACATGATCCCTACCAT...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTGAAGCTTCCAGAGACTaGAGCAGCTCAAAAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: HCSCTPFTVYVLITLFVLEASRD*SSSKRT Trigger: AGTCCTTTTTGAGCTGCTCAAGTCTCTGGAAGCTTC...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGGGACAGGATTCTCTTTaGGATCTGCTTCAGCCCGTT | + |
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Preference number: 5 (lower is better) Translates to: YLRKLFLYTALVLLSLCTGQDSL*DLLQPV Trigger: AACGGGCTGAAGCAGATCCAAAAGAGAATCCTGTCC...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | CACTGCTCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTGTCCAGACAGTTTCTTaGAGGCAAGACACCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: HCSCTPFTVYVLITLFVLVQTVS*RQDTMK Trigger: TTTCATGGTGTCTTGCCTCAAAGAAACTGTCTGGAC...AAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGAGCAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | TATCTAAGAAAACTATTTCTTTACACTGCTCTTGTACTCCTTTCACTGTGTACGTTGGGTGTGGAGAACTaGGTCCAGACAGTTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: YLRKLFLYTALVLLSLCTLGVEN*VQTVSL Trigger: CAAAGAAACTGTCTGGACCAAGTTCTCCACACCCAA...CGTACACAGTGAAAGGAGTACAAGAGCAGTGTAAAGAAATAGTTTTCTTAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTAACTGCTTCTCTTCTTaGGGTGTGGAGAACTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SCTPFTVYVLITLFVLSSNCFSS*GVENLV Trigger: GACCAAGTTCTCCACACCCAAAGAAGAGAAGCAGTT...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS-3UTR CAA 90 bp | TCTTGTACTCCTTTCACTGTGTACGTTCTTATAACTTTGTTTGTTCTTAGCTCTGAAAGAACTTTATTTTaGTCTGGAAGAGAGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SCTPFTVYVLITLFVLSSERTLF*SGRERS Trigger: AGACCTCTCTCTTCCAGACAAAAATAAAGTTCTTTC...AGAGCTAAGAACAAACAAAGTTATAAGAACGTACACAGTGAAAGGAGTACAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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| CDS GCA 72 bp | GGGTGGAACAGCTGCTCAGCCATCAAGAAGCCCCCATaGAGAATAGTCATCTCCTCACAGATATTCAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GWNSCSAIKKPP*RIVISSQIFKG Trigger: ACCCTTGAATATCTGTGAGGAGATGACTATTCTGCATGGGGGCTTCTTGATGGCTGAGCAGCTGTTCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102500.5 |
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